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ONTOLOGY REPORT - ANNOTATIONS


Term:protein transport along microtubule
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Accession:GO:0098840 term browser browse the term
Definition:The directed movement of a protein along a microtubule, mediated by motor proteins.
Synonyms:exact_synonym: microtubule-based protein transport


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anterograde axonal protein transport term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G HSPB1 heat shock protein family B (small) member 1 JBrowse link 6 7,487,164 7,488,576 RGD:13508589
G MAPK8IP3 mitogen-activated protein kinase 8 interacting protein 3 JBrowse link 6 39,132,746 39,179,427 RGD:13508589
anterograde dendritic transport of neurotransmitter receptor complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G KIF17 kinesin family member 17 JBrowse link 2 78,224,838 78,266,612 RGD:13508589
G KIF5A kinesin family member 5A JBrowse link 10 1,637,007 1,666,790 RGD:13508589
G KIF5B kinesin family member 5B JBrowse link 2 14,835,906 14,880,896 RGD:13508589
G KIF5C kinesin family member 5C JBrowse link 19 50,535,622 50,684,485 RGD:13508589
dendritic transport of messenger ribonucleoprotein complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G HNRNPU heterogeneous nuclear ribonucleoprotein U JBrowse link 7 35,832,956 35,842,898 RGD:13508589
G PURA purine rich element binding protein A JBrowse link 2 35,325,630 35,345,366 RGD:13508589
G SFPQ splicing factor proline and glutamine rich JBrowse link 15 6,879,955 6,896,309 RGD:13508589
intraciliary anterograde transport term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G IFT122 intraflagellar transport 122 JBrowse link 20 5,644,002 5,716,702 RGD:13508589
G IFT52 intraflagellar transport 52 JBrowse link 24 31,295,987 31,334,825 RGD:13508589
G TTC26 tetratricopeptide repeat domain 26 JBrowse link 16 9,528,236 9,581,089 RGD:13508589
intraciliary retrograde transport term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G DYNC2H1 dynein cytoplasmic 2 heavy chain 1 JBrowse link 5 28,566,604 28,727,416 RGD:13508589
G DYNC2LI1 dynein cytoplasmic 2 light intermediate chain 1 JBrowse link 10 46,231,433 46,270,102 RGD:13508589
G IFT122 intraflagellar transport 122 JBrowse link 20 5,644,002 5,716,702 RGD:13508589
G IFT140 intraflagellar transport 140 JBrowse link 6 39,262,887 39,308,912 RGD:13508589
G IFT43 intraflagellar transport 43 JBrowse link 8 48,949,740 49,031,614 RGD:13508589
G LOC102151816 intraflagellar transport protein 140 homolog RGD:13508589
G TTC21A tetratricopeptide repeat domain 21A JBrowse link 23 8,776,252 8,812,480 RGD:13508589
G TTC21B tetratricopeptide repeat domain 21B JBrowse link 36 11,009,362 11,086,586 RGD:13508589
G WDR19 WD repeat domain 19 JBrowse link 3 73,115,560 73,213,823 RGD:13508589
G WDR35 WD repeat domain 35 JBrowse link 17 14,976,662 15,034,918 RGD:13508589
intraciliary transport term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BBS12 Bardet-Biedl syndrome 12 JBrowse link 19 17,537,840 17,550,443 RGD:13508589
G CILK1 iciliogenesis associated kinase 1 JBrowse link 12 20,453,322 20,511,463 RGD:13508589
G HSPB11 heat shock protein family B (small) member 11 JBrowse link 5 55,042,926 55,070,204 RGD:13508589
G IFT140 intraflagellar transport 140 JBrowse link 6 39,262,887 39,308,912 RGD:13508589
G IFT172 intraflagellar transport 172 JBrowse link 17 21,389,462 21,426,970 RGD:13508589
G IFT20 intraflagellar transport 20 JBrowse link 9 42,581,117 42,587,830 RGD:13508589
G IFT27 intraflagellar transport 27 JBrowse link 10 27,688,742 27,707,343 RGD:13508589
G IFT46 intraflagellar transport 46 JBrowse link 5 15,179,287 15,197,737 RGD:13508589
G IFT52 intraflagellar transport 52 JBrowse link 24 31,295,987 31,334,825 RGD:13508589
G IFT57 intraflagellar transport 57 JBrowse link 33 13,432,902 13,486,692 RGD:13508589
G IFT81 intraflagellar transport 81 JBrowse link 26 8,017,315 8,123,972 RGD:13508589
G IFT88 intraflagellar transport 88 JBrowse link 25 17,414,965 17,551,405 RGD:13508589
G LCA5 lebercilin LCA5 JBrowse link 12 40,443,759 40,527,300 RGD:13508589
G LOC102151816 intraflagellar transport protein 140 homolog RGD:13508589
G MAK male germ cell associated kinase JBrowse link 35 10,474,081 10,530,951 RGD:13508589
G RPGR retinitis pigmentosa GTPase regulator JBrowse link X 33,056,371 33,105,036 RGD:13508589
G SSNA1 SS nuclear autoantigen 1 JBrowse link 9 48,474,132 48,475,731 RGD:13508589
G TRAF3IP1 TRAF3 interacting protein 1 JBrowse link 25 48,782,448 48,836,993 RGD:13508589
G TTC30B tetratricopeptide repeat domain 30B JBrowse link 36 21,270,467 21,273,878 RGD:13508589
G WDR34 WD repeat domain 34 JBrowse link 9 54,930,039 54,953,752 RGD:13508589
intraciliary transport involved in cilium assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G DYNC2LI1 dynein cytoplasmic 2 light intermediate chain 1 JBrowse link 10 46,231,433 46,270,102 RGD:13508589
G IFT74 intraflagellar transport 74 JBrowse link 11 45,159,124 45,242,019 RGD:13508589
G IFT81 intraflagellar transport 81 JBrowse link 26 8,017,315 8,123,972 RGD:13508589
G PCM1 pericentriolar material 1 JBrowse link 16 41,212,733 41,291,654 RGD:13508589
G SSX2IP SSX family member 2 interacting protein JBrowse link 6 63,147,111 63,266,481 RGD:13508589
G TTC26 tetratricopeptide repeat domain 26 JBrowse link 16 9,528,236 9,581,089 RGD:13508589
regulation of intraciliary retrograde transport term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G TTC21B tetratricopeptide repeat domain 21B JBrowse link 36 11,009,362 11,086,586 RGD:13508589

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 13038
    localization 3982
      cellular localization 1615
        intracellular transport 968
          intracellular protein transport 683
            protein transport along microtubule 41
              axo-dendritic protein transport + 9
              intraciliary transport + 32
              intramanchette transport 0
              protein transport along microtubule to cell tip 0
              protein transport along microtubule to kinetochore 0
              protein transport along microtubule to spindle pole body + 0
Path 2
Term Annotations click to browse term
  biological_process 13038
    localization 3982
      establishment of localization 3076
        transport 2986
          nitrogen compound transport 1294
            amide transport 1092
              peptide transport 1067
                protein transport 1040
                  microtubule-based protein transport 41
                    protein transport along microtubule 41
                      axo-dendritic protein transport + 9
                      intraciliary transport + 32
                      intramanchette transport 0
                      protein transport along microtubule to cell tip 0
                      protein transport along microtubule to kinetochore 0
                      protein transport along microtubule to spindle pole body + 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.