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ONTOLOGY REPORT - ANNOTATIONS


Term:lytic vacuole membrane
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Accession:GO:0098852 term browser browse the term
Definition:The lipid bilayer surrounding a lytic vacuole and separating its contents from the cytoplasm of the cell.


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azurophil granule membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AZU1 azurocidin 1 ISO (PMID:2312733) UniProtKB PMID:2312733 NCBI chr19:300,318...304,730
Ensembl chr19:797,038...800,691
JBrowse link
G VAMP1 vesicle associated membrane protein 1 NOT ISO (PMID:11391393) UniProtKB PMID:11391393 NCBI chr12:6,592,688...6,601,317
Ensembl chr12:6,509,762...6,518,459
JBrowse link
G VAMP7 vesicle associated membrane protein 7 ISO (PMID:16677249) UniProtKB PMID:16677249 NCBI chr  X:145,362,432...145,425,097
Ensembl chr  X:155,257,185...155,320,215
JBrowse link
G VAMP8 vesicle associated membrane protein 8 ISO (PMID:16677249) UniProtKB PMID:16677249 NCBI chr2A:85,627,678...85,632,205
Ensembl chr2A:87,180,681...87,185,195
JBrowse link
chaperone-mediated autophagy translocation complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LAMP2 lysosomal associated membrane protein 2 ISO (PMID:8662539) ParkinsonsUK-UCL PMID:8662539 NCBI chr  X:109,700,185...109,743,579
Ensembl chr  X:119,886,982...119,929,896
JBrowse link
cytoplasmic side of lysosomal membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BORCS5 BLOC-1 related complex subunit 5 ISO (PMID:25898167) UniProtKB PMID:25898167 NCBI chr12:12,380,071...12,488,735
Ensembl chr12:12,749,104...12,857,043
JBrowse link
G CDIP1 cell death inducing p53 target 1 ISO (PMID:27582497) UniProtKB PMID:27582497 NCBI chr16:3,437,414...3,464,989
Ensembl chr16:4,604,954...4,632,724
JBrowse link
G GFAP glial fibrillary acidic protein ISO PMID:20797626 ParkinsonsUK-UCL PMID:20797626 RGD:10412296 NCBI chr17:12,407,211...12,417,072
Ensembl chr17:12,579,754...12,591,961
JBrowse link
G LITAF lipopolysaccharide induced TNF factor ISO (PMID:27582497) UniProtKB PMID:27582497 NCBI chr16:10,488,738...10,527,843
Ensembl chr16:11,714,325...11,750,521
JBrowse link
endolysosome membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CLEC16A C-type lectin domain containing 16A ISO (MGI:MGI:5603233|PMID:24949970) MGI PMID:24949970 MGI:MGI:5603233 NCBI chr16:9,887,877...10,124,500
Ensembl chr16:11,109,869...11,343,512
JBrowse link
G SLC15A4 solute carrier family 15 member 4 ISO (PMID:32433612) UniProt PMID:32433612 NCBI chr12:126,418,071...126,448,917 JBrowse link
G TASL TLR adaptor interacting with endolysosomal SLC15A4 ISO (PMID:32433612) UniProt PMID:32433612 NCBI chr  X:23,159,321...23,178,192
Ensembl chr  X:30,716,617...30,717,522
JBrowse link
extrinsic component of lysosome membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RAB7A RAB7A, member RAS oncogene family ISO (MGI:MGI:5689086|PMID:23708524) GO_Central PMID:23708524 MGI:MGI:5689086 NCBI chr 3:125,784,604...125,873,051 JBrowse link
integral component of lysosomal membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP13A2 ATPase cation transporting 13A2 ISO (PMID:26134396) ParkinsonsUK-UCL PMID:26134396 NCBI chr 1:15,929,613...15,955,631
Ensembl chr 1:16,986,385...17,006,033
Ensembl chr 1:16,986,385...17,006,033
JBrowse link
G NPC1 NPC intracellular cholesterol transporter 1 ISO (PMID:28784760), (PMID:9927649) UniProtKB PMID:9927649, PMID:28784760 NCBI chr18:16,783,096...16,838,301
Ensembl chr18:20,409,040...20,463,623
JBrowse link
G SLC15A4 solute carrier family 15 member 4 ISO (PMID:25238095), (PMID:29224352)
(MGI:MGI:6112943|PMID:29155995), (MGI:MGI:6278628|PMID:21277849)
UniProt PMID:21277849, PMID:25238095, PMID:29155995, PMID:29224352 MGI:MGI:6112943, MGI:MGI:6278628 NCBI chr12:126,418,071...126,448,917 JBrowse link
G SLC38A9 solute carrier family 38 member 9 ISO (PMID:29053970) UniProt PMID:29053970 NCBI chr 5:58,312,101...58,397,365
Ensembl chr 5:59,944,034...60,020,769
JBrowse link
G SLC46A3 solute carrier family 46 member 3 ISO (PMID:26631267) FlyBase PMID:26631267 NCBI chr13:9,987,309...10,007,152
Ensembl chr13:28,327,633...28,347,534
JBrowse link
G SPAAR small regulatory polypeptide of amino acid response ISO (PMID:28024296) UniProtKB PMID:28024296 NCBI chr 9:35,760,064...35,762,224
Ensembl chr 9:36,563,148...36,563,420
JBrowse link
lysosomal membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCB9 ATP binding cassette subfamily B member 9 ISO (PMID:10748049), (PMID:17977821), (PMID:18952056) UniProtKB PMID:10748049, PMID:17977821, PMID:18952056 NCBI chr12:120,523,592...120,573,322
Ensembl chr12:124,760,277...124,815,853
JBrowse link
G ABCD1 ATP binding cassette subfamily D member 1 ISO (PMID:16946495) UniProtKB PMID:16946495 NCBI chr  X:143,275,165...143,295,283
Ensembl chr  X:153,162,412...153,182,424
JBrowse link
G ABCD4 ATP binding cassette subfamily D member 4 ISO (PMID:27456980) UniProt PMID:27456980 NCBI chr14:54,833,388...54,850,482
Ensembl chr14:73,684,109...73,701,344
JBrowse link
G ABHD6 abhydrolase domain containing 6, acylglycerol lipase ISO (MGI:MGI:5700445|PMID:26491015) UniProt PMID:26491015 MGI:MGI:5700445 NCBI chr 3:58,172,334...58,227,531
Ensembl chr 3:59,586,573...59,641,824
JBrowse link
G ANXA2 annexin A2 ISO (PMID:23360953) UniProtKB PMID:23360953 NCBI chr15:39,322,303...39,371,565
Ensembl chr15:57,625,425...57,674,250
JBrowse link
G ANXA6 annexin A6 ISO (PMID:23360953) UniProtKB PMID:23360953 NCBI chr 5:146,528,446...146,585,186
Ensembl chr 5:152,530,445...152,652,231
JBrowse link
G ARL8B ADP ribosylation factor like GTPase 8B colocalizes_with ISO (PMID:25898167) UniProtKB PMID:25898167 NCBI chr 3:5,069,592...5,127,301
Ensembl chr 3:5,169,950...5,225,543
JBrowse link
G ATP13A2 ATPase cation transporting 13A2 ISO (PMID:23499937) ParkinsonsUK-UCL PMID:23499937 NCBI chr 1:15,929,613...15,955,631
Ensembl chr 1:16,986,385...17,006,033
Ensembl chr 1:16,986,385...17,006,033
JBrowse link
G ATP6V1G1 ATPase H+ transporting V1 subunit G1 ISO (MGI:MGI:2387737|PMID:12133826) MGI PMID:12133826 MGI:MGI:2387737 NCBI chr 9:85,685,910...85,696,255
Ensembl chr 9:114,048,387...114,058,878
JBrowse link
G ATRAID all-trans retinoic acid induced differentiation factor ISO (MGI:MGI:5641105|PMID:25839652) CACAO PMID:25839652 MGI:MGI:5641105 NCBI chr2A:27,213,556...27,218,552
Ensembl chr2A:27,301,175...27,306,294
JBrowse link
G CD63 CD63 molecule ISO (PMID:22431521), (PMID:23632027) UniProtKB PMID:22431521, PMID:23632027 NCBI chr12:33,181,896...33,186,123
Ensembl chr12:33,906,314...33,910,595
JBrowse link
G CLCN3 chloride voltage-gated channel 3 ISO (MGI:MGI:6414690|PMID:28972156), (MGI:MGI:6414716|PMID:26342074) UniProt PMID:26342074, PMID:28972156 MGI:MGI:6414690, MGI:MGI:6414716 NCBI chr 4:161,838,061...161,943,072
Ensembl chr 4:173,925,474...174,011,681
JBrowse link
G CLCN4 chloride voltage-gated channel 4 ISO (PMID:28972156) UniProt PMID:28972156 NCBI chr  X:2,787,185...2,867,846
Ensembl chr  X:10,040,067...10,120,991
JBrowse link
G CLN3 CLN3 lysosomal/endosomal transmembrane protein, battenin ISO (PMID:10332042), (PMID:9384607)
(PMID:15598649), (PMID:23840424)
UniProt PMID:9384607, PMID:10332042, PMID:15598649, PMID:23840424
G CLN5 CLN5 intracellular trafficking protein ISO (PMID:12134079) UniProtKB PMID:12134079 NCBI chr13:58,207,542...58,220,697
Ensembl chr13:77,253,203...77,263,759
JBrowse link
G CTNS cystinosin, lysosomal cystine transporter ISO (PMID:11150305) UniProtKB PMID:11150305 NCBI chr17:3,686,903...3,711,857
Ensembl chr17:3,683,575...3,708,253
JBrowse link
G CTSA cathepsin A ISO PMID:12505983 ParkinsonsUK-UCL PMID:12505983 RGD:10412300 NCBI chr20:42,229,064...42,237,627
Ensembl chr20:43,316,530...43,324,671
JBrowse link
G CTSD cathepsin D ISO (PMID:17188016) ARUK-UCL PMID:17188016 NCBI chr11:1,789,326...1,800,524 JBrowse link
G DEPDC5 DEP domain containing 5, GATOR1 subcomplex subunit ISO (PMID:28199306) UniProtKB PMID:28199306 NCBI chr22:12,774,147...12,929,261 JBrowse link
G FFAR4 free fatty acid receptor 4 ISO (PMID:22282525) UniProt PMID:22282525 NCBI chr10:90,312,647...90,336,115
Ensembl chr10:93,823,004...93,860,262
JBrowse link
G FLCN folliculin ISO (PMID:24081491), (PMID:24095279), (PMID:27113757), (PMID:29848618), (PMID:31672913) UniProt PMID:24081491, PMID:24095279, PMID:27113757, PMID:29848618, PMID:31672913 NCBI chr17:34,057,127...34,081,637
Ensembl chr17:38,988,518...39,013,160
JBrowse link
G FNIP1 folliculin interacting protein 1 ISO (PMID:24081491), (PMID:29848618) UniProt PMID:24081491, PMID:29848618 NCBI chr 5:127,070,906...127,219,548
Ensembl chr 5:133,235,501...133,384,218
JBrowse link
G GPR137 G protein-coupled receptor 137 ISO (PMID:31036939) UniProt PMID:31036939 NCBI chr11:59,627,488...59,646,556
Ensembl chr11:62,985,909...62,990,950
JBrowse link
G GPR137B G protein-coupled receptor 137B ISO (MGI:MGI:6362357|PMID:31173907)
(PMID:31036939)
UniProt PMID:31036939, PMID:31173907 MGI:MGI:6362357 NCBI chr 1:211,709,507...211,775,846
Ensembl chr 1:216,696,105...216,778,370
JBrowse link
G GPR137C G protein-coupled receptor 137C ISO (PMID:31036939) UniProt PMID:31036939 NCBI chr14:33,149,743...33,233,895
Ensembl chr14:51,434,432...51,517,977
JBrowse link
G GPR143 G protein-coupled receptor 143 ISO (PMID:16621890) UniProtKB PMID:16621890 NCBI chr  X:2,357,835...2,398,389
Ensembl chr  X:9,609,598...9,650,075
JBrowse link
G GRN granulin precursor ISO (PMID:21092856) UniProt PMID:21092856 NCBI chr17:13,046,329...13,054,236
Ensembl chr17:13,211,784...13,219,609
JBrowse link
G HGSNAT heparan-alpha-glucosaminide N-acetyltransferase ISO (PMID:19823584), (PMID:20650889) UniProtKB PMID:19823584, PMID:20650889 NCBI chr 8:42,388,406...42,448,466 JBrowse link
G HPS6 HPS6 biogenesis of lysosomal organelles complex 2 subunit 3 ISO (PMID:25189619) UniProtKB PMID:25189619 NCBI chr10:98,670,168...98,672,896
Ensembl chr10:102,139,439...102,141,766
JBrowse link
G HSP90AB1 heat shock protein 90 alpha family class B member 1 ISO PMID:18644871 ParkinsonsUK-UCL PMID:18644871 RGD:10412301 NCBI chr 6:43,842,796...43,849,637
Ensembl chr 6:45,125,773...45,133,872
JBrowse link
G HSPA8 heat shock protein family A (Hsp70) member 8 ISO PMID:18644871 ParkinsonsUK-UCL
RGD
PMID:9038169, PMID:18644871 RGD:10059368, RGD:10412301 NCBI chr11:117,890,545...117,895,262
Ensembl chr11:121,809,800...121,815,773
JBrowse link
G ITFG2 integrin alpha FG-GAP repeat containing 2 ISO (PMID:28199306) UniProtKB PMID:28199306 NCBI chr12:2,933,227...2,980,509
Ensembl chr12:2,865,297...2,877,555
JBrowse link
G LAMP2 lysosomal associated membrane protein 2 ISO (MGI:MGI:3773765|PMID:18022370), (MGI:MGI:5291841|PMID:21896273)
PMID:11082038
PMID:18644871
PMID:8662539
(PMID:15297306), (PMID:21896273)
BHF-UCL
ParkinsonsUK-UCL
MGI
PMID:8662539, PMID:11082038, PMID:15297306, PMID:18022370, PMID:18644871, PMID:21896273 MGI:MGI:3773765, MGI:MGI:5291841, RGD:10412301, RGD:10412302, RGD:1581607 NCBI chr  X:109,700,185...109,743,579
Ensembl chr  X:119,886,982...119,929,896
JBrowse link
G LAMP3 lysosomal associated membrane protein 3 ISO (MGI:MGI:2675198|PMID:12938238) MGI PMID:12938238 MGI:MGI:2675198 NCBI chr 3:180,152,363...180,193,223
Ensembl chr 3:188,324,660...188,363,268
JBrowse link
G LAPTM4A lysosomal protein transmembrane 4 alpha ISO (PMID:22096579) UniProtKB PMID:22096579 NCBI chr2A:20,019,774...20,038,289
Ensembl chr2A:20,135,960...20,154,667
JBrowse link
G LAPTM4B lysosomal protein transmembrane 4 beta ISO (PMID:21224396), (PMID:22096579) UniProtKB PMID:21224396, PMID:22096579 NCBI chr 8:94,414,275...94,491,483 JBrowse link
G LITAF lipopolysaccharide induced TNF factor ISO (PMID:11274176) MGI PMID:11274176 NCBI chr16:10,488,738...10,527,843
Ensembl chr16:11,714,325...11,750,521
JBrowse link
G LOC100968989 HLA class II histocompatibility antigen, DM alpha chain ISO (MGI:MGI:3033762|PMID:7985028) MGI PMID:7985028 MGI:MGI:3033762 NCBI chr 6:32,518,060...32,537,989
Ensembl chr 6:33,634,123...33,637,988
JBrowse link
G LOC100974743 cytochrome b ascorbate-dependent protein 3 ISO (MGI:MGI:3695337|PMID:16996694) UniProtKB PMID:16996694 MGI:MGI:3695337 NCBI chr11:56,648,322...56,661,758
Ensembl chr11:60,013,043...60,026,207
JBrowse link
G LOC100987081 HLA class II histocompatibility antigen, DR alpha chain ISO (PMID:18305173) UniProtKB PMID:18305173 NCBI chr 6:32,105,421...32,110,579
Ensembl chr 6:32,982,228...32,987,417
JBrowse link
G MARCHF1 membrane associated ring-CH-type finger 1 ISO (MGI:MGI:4430128|PMID:19880452) UniProtKB PMID:19880452 MGI:MGI:4430128 NCBI chr 4:155,791,599...156,639,456 JBrowse link
G MCOLN1 mucolipin 1 ISO RGD PMID:17613490 RGD:7205504 NCBI chr19:6,813,498...6,825,153
Ensembl chr19:7,671,704...7,683,093
JBrowse link
G MEAK7 MTOR associated protein, eak-7 homolog ISO (PMID:29750193) UniProt PMID:29750193 NCBI chr16:65,141,319...65,167,898
Ensembl chr16:84,482,997...84,509,530
JBrowse link
G MHC-DMB HLA class II histocompatibility antigen, DM beta chain ISO (MGI:MGI:3033877|PMID:7584146) MGI PMID:7584146 MGI:MGI:3033877 NCBI chr 6:32,504,074...32,510,669
Ensembl chr 6:33,619,870...33,625,685
JBrowse link
G MIOS meiosis regulator for oocyte development ISO (PMID:28199306) UniProtKB PMID:28199306 NCBI chr 7:8,291,307...8,346,822
Ensembl chr 7:7,643,780...7,684,246
JBrowse link
G MTOR mechanistic target of rapamycin kinase ISO (PMID:30956113) UniProt PMID:30956113 NCBI chr 1:9,871,700...10,028,704
Ensembl chr 1:11,093,765...11,249,841
JBrowse link
G MYO7A myosin VIIA ISO (PMID:16001398) UniProtKB PMID:16001398 NCBI chr11:72,187,024...72,265,931
Ensembl chr11:75,834,185...75,907,752
JBrowse link
G NCSTN nicastrin ISO RGD PMID:12736250 RGD:724403 NCBI chr 1:135,697,592...135,713,293
Ensembl chr 1:139,618,229...139,633,911
JBrowse link
G NEU3 neuraminidase 3 ISO (PMID:26251452) UniProt PMID:26251452 NCBI chr11:70,047,878...70,070,303
Ensembl chr11:73,353,332...73,373,270
JBrowse link
G NPRL2 NPR2 like, GATOR1 complex subunit ISO (PMID:28199306) UniProtKB PMID:28199306 NCBI chr 3:50,273,611...50,277,175
Ensembl chr 3:51,508,932...51,512,776
JBrowse link
G NPRL3 NPR3 like, GATOR1 complex subunit ISO (PMID:28199306) UniProtKB PMID:28199306 Ensembl chr16:75,187...129,220 JBrowse link
G OCA2 OCA2 melanosomal transmembrane protein ISO (PMID:19116314) UniProtKB PMID:19116314 NCBI chr15:1,811,728...2,192,018
Ensembl chr15:25,181,386...25,523,774
JBrowse link
G OCLN occludin ISO (PMID:28718701) ARUK-UCL PMID:28718701 NCBI chr 5:44,447,230...44,509,637
Ensembl chr 5:46,023,437...46,069,342
JBrowse link
G PIP4P1 phosphatidylinositol-4,5-bisphosphate 4-phosphatase 1 ISO (MGI:MGI:6304515|PMID:29644770)
(PMID:16365287), (PMID:29146937)
UniProt
FlyBase
PMID:16365287, PMID:29146937, PMID:29644770 MGI:MGI:6304515 NCBI chr14:1,332,403...1,336,157
Ensembl chr14:19,384,634...19,388,140
JBrowse link
G PIP4P2 phosphatidylinositol-4,5-bisphosphate 4-phosphatase 2 ISO (PMID:16365287) FlyBase PMID:16365287 NCBI chr 8:87,657,202...87,704,355
Ensembl chr 8:89,611,726...89,639,419
JBrowse link
G PLA2G4E phospholipase A2 group IVE ISO (MGI:MGI:6161105|PMID:29447909) UniProt PMID:29447909 MGI:MGI:6161105 NCBI chr15:20,937,573...20,975,388
Ensembl chr15:39,095,777...39,165,161
JBrowse link
G PLD3 phospholipase D family member 3 ISO (MGI:MGI:6115966|PMID:28128235) UniProt PMID:28128235 MGI:MGI:6115966 NCBI chr19:37,396,475...37,426,425
Ensembl chr19:45,910,035...45,939,343
JBrowse link
G PSEN1 presenilin 1 ISO RGD PMID:12736250 RGD:724403 NCBI chr14:53,718,299...53,802,684
Ensembl chr14:72,579,024...72,663,876
JBrowse link
G RNF13 ring finger protein 13 ISO (MGI:MGI:3844769|PMID:19292867) UniProtKB PMID:19292867 MGI:MGI:3844769 NCBI chr 3:146,828,951...146,983,613
Ensembl chr 3:154,408,822...154,563,298
JBrowse link
G RNF152 ring finger protein 152 ISO (PMID:25936802) UniProtKB PMID:25936802 NCBI chr18:55,180,955...55,264,164
Ensembl chr18:58,507,684...58,508,295
JBrowse link
G RNF183 ring finger protein 183 ISO (MGI:MGI:6113025|PMID:29300766) UniProt PMID:29300766 MGI:MGI:6113025 NCBI chr 9:84,396,738...84,404,057 JBrowse link
G SCARB2 scavenger receptor class B member 2 ISO (MGI:MGI:3773765|PMID:18022370) BHF-UCL PMID:18022370 MGI:MGI:3773765 NCBI chr 4:47,992,589...48,047,528
Ensembl chr 4:53,830,488...53,886,059
JBrowse link
G SEC13 SEC13 homolog, nuclear pore and COPII coat complex component ISO (PMID:28199306) UniProtKB PMID:28199306 NCBI chr 3:10,237,101...10,257,694
Ensembl chr 3:10,588,644...10,608,754
JBrowse link
G SEH1L SEH1 like nucleoporin ISO (PMID:28199306) UniProtKB PMID:28199306 NCBI chr18:1,342,928...1,379,719
Ensembl chr18:16,464,446...16,500,693
JBrowse link
G SIDT2 SID1 transmembrane family member 2 ISO (PMID:17897319)
(MGI:MGI:4867132|PMID:20965152)
UniProtKB PMID:17897319, PMID:20965152 MGI:MGI:4867132 NCBI chr11:112,012,734...112,031,403
Ensembl chr11:115,946,725...115,963,408
JBrowse link
G SLC11A2 solute carrier family 11 member 2 ISO (PMID:10751401) RGD
BHF-UCL
PMID:10751401, PMID:16449358 RGD:1580424 NCBI chr12:37,726,158...37,774,554
Ensembl chr12:38,629,686...38,677,377
JBrowse link
G SLC15A3 solute carrier family 15 member 3 ISO (MGI:MGI:5571205|PMID:24695226) RGD
UniProt
PMID:11336635, PMID:24695226 MGI:MGI:5571205, RGD:633591 NCBI chr11:56,200,278...56,215,451
Ensembl chr11:59,640,970...59,655,535
JBrowse link
G SLC15A4 solute carrier family 15 member 4 ISO (MGI:MGI:5571205|PMID:24695226) UniProt PMID:24695226 MGI:MGI:5571205 NCBI chr12:126,418,071...126,448,917 JBrowse link
G SLC17A5 solute carrier family 17 member 5 ISO (PMID:3961501) MGI PMID:3961501 NCBI chr 6:71,404,354...71,477,511
Ensembl chr 6:74,702,447...74,760,557
JBrowse link
G SLC26A11 solute carrier family 26 member 11 ISO (PMID:20957757) UniProtKB PMID:20957757 NCBI chr17:74,647,880...74,681,247
Ensembl chr17:80,381,942...80,414,210
JBrowse link
G SLC2A6 solute carrier family 2 member 6 ISO (PMID:30431159) UniProt PMID:30431159 NCBI chr 9:104,589,227...104,602,769
Ensembl chr 9:133,205,995...133,214,051
JBrowse link
G SLC35F6 solute carrier family 35 member F6 ISO (PMID:20957757) UniProtKB PMID:20957757 NCBI chr2A:26,762,690...26,780,492
Ensembl chr2A:26,854,078...26,871,820
JBrowse link
G SLC38A9 solute carrier family 38 member 9 ISO (PMID:30956113) UniProt PMID:30956113 NCBI chr 5:58,312,101...58,397,365
Ensembl chr 5:59,944,034...60,020,769
JBrowse link
G SLC39A14 solute carrier family 39 member 14 ISO (PMID:20682781) UniProt PMID:20682781 NCBI chr 8:21,617,529...21,672,726
Ensembl chr 8:18,555,895...18,621,510
JBrowse link
G SLC39A8 solute carrier family 39 member 8 ISO (PMID:18390834), (PMID:19401385) UniProt PMID:18390834, PMID:19401385 NCBI chr 4:94,675,458...94,770,380
Ensembl chr 4:105,339,488...105,433,568
JBrowse link
G SLC48A1 solute carrier family 48 member 1 ISO (PMID:18418376) WormBase PMID:18418376 NCBI chr12:40,950,511...40,977,994 JBrowse link
G SLC66A1 solute carrier family 66 member 1 ISO (PMID:22822152)
PMID:23169667
UniProtKB
UniProt
PMID:22822152, PMID:23169667 RGD:8553575 NCBI chr 1:18,270,882...18,288,387
Ensembl chr 1:19,317,244...19,333,926
JBrowse link
G SPAG9 sperm associated antigen 9 ISO (PMID:29146937) UniProt PMID:29146937 NCBI chr17:45,053,292...45,211,488
Ensembl chr17:49,924,650...50,081,918
JBrowse link
G SPPL2A signal peptide peptidase like 2A ISO (MGI:MGI:5291841|PMID:21896273) MGI PMID:21896273 MGI:MGI:5291841 NCBI chr15:29,660,190...29,718,477
Ensembl chr15:47,997,304...48,055,239
JBrowse link
G SPPL2B signal peptide peptidase like 2B ISO (PMID:15998642) UniProtKB PMID:15998642 NCBI chr19:1,337,570...1,355,755
Ensembl chr19:2,309,360...2,331,951
JBrowse link
G STX17 syntaxin 17 NOT ISO (PMID:10930465) UniProtKB PMID:10930465 NCBI chr 9:70,989,913...71,058,374
Ensembl chr 9:99,107,243...99,168,801
JBrowse link
G STX7 syntaxin 7 ISO RGD PMID:15133481 RGD:4892614 NCBI chr 6:130,232,041...130,289,326
Ensembl chr 6:134,342,304...134,398,215
JBrowse link
G STX8 syntaxin 8 ISO RGD PMID:15133481 RGD:4892614 NCBI chr17:42,076,600...42,403,334
Ensembl chr17:46,816,859...47,141,816
JBrowse link
G SZT2 SZT2 subunit of KICSTOR complex ISO (PMID:28199315) UniProtKB PMID:28199315 NCBI chr 1:42,691,292...42,754,046
Ensembl chr 1:44,068,998...44,129,456
JBrowse link
G TECPR1 tectonin beta-propeller repeat containing 1 ISO (PMID:22342342) UniProtKB PMID:22342342 NCBI chr 7:6,269,935...6,306,941
Ensembl chr 7:103,680,156...103,716,572
JBrowse link
G TFEB transcription factor EB ISO (PMID:22343943), (PMID:22692423) UniProt PMID:22343943, PMID:22692423 NCBI chr 6:41,268,169...41,320,822
Ensembl chr 6:42,574,416...42,627,031
JBrowse link
G TM4SF5 transmembrane 4 L six family member 5 ISO (PMID:30956113) UniProt PMID:30956113 NCBI chr17:4,818,508...4,830,158
Ensembl chr17:4,808,390...4,820,536
JBrowse link
G TM6SF1 transmembrane 6 superfamily member 1 ISO (MGI:MGI:5619893|PMID:25422095) UniProtKB PMID:25422095 MGI:MGI:5619893 NCBI chr15:62,467,207...62,498,060
Ensembl chr15:80,995,993...81,025,503
JBrowse link
G TMBIM1 transmembrane BAX inhibitor motif containing 1 ISO (PMID:16607040) UniProtKB PMID:16607040 NCBI chr2B:105,533,578...105,551,969
Ensembl chr2B:224,131,478...224,143,170
JBrowse link
G TMEM106B transmembrane protein 106B ISO (PMID:24357581) UniProtKB PMID:24357581 NCBI chr 7:12,905,192...12,931,170
Ensembl chr 7:12,250,010...12,270,693
JBrowse link
G TMEM165 transmembrane protein 165 ISO (PMID:23575229) UniProtKB PMID:23575229 NCBI chr 4:68,484,896...68,541,808
Ensembl chr 4:75,075,427...75,104,629
JBrowse link
G TMEM192 transmembrane protein 192 ISO (PMID:20370317) UniProtKB PMID:20370317 NCBI chr 4:157,269,816...157,304,743
Ensembl chr 4:169,318,179...169,427,945
JBrowse link
G TMEM63A transmembrane protein 63A ISO (PMID:20957757) UniProtKB PMID:20957757 NCBI chr 1:201,306,608...201,344,627
Ensembl chr 1:206,307,554...206,343,458
JBrowse link
G TMEM79 transmembrane protein 79 ISO (MGI:MGI:5518480|PMID:24060273) UniProtKB PMID:24060273 MGI:MGI:5518480 NCBI chr 1:131,625,864...131,635,370
Ensembl chr 1:135,455,766...135,465,426
JBrowse link
G TMEM9 transmembrane protein 9 ISO (PMID:30374053) UniProt PMID:30374053 NCBI chr 1:176,734,640...176,771,476
Ensembl chr 1:181,037,050...181,056,841
JBrowse link
G TPCN1 two pore segment channel 1 ISO (PMID:19620632) UniProtKB PMID:19620632 NCBI chr12:110,812,587...110,903,033
Ensembl chr12:114,209,638...114,286,443
JBrowse link
G TPCN2 two pore segment channel 2 ISO (PMID:19387438), (PMID:19620632)
(MGI:MGI:5285171|PMID:19557428)
UniProtKB PMID:19387438, PMID:19557428, PMID:19620632 MGI:MGI:5285171 NCBI chr11:64,139,512...64,227,913 JBrowse link
G TRIM23 tripartite motif containing 23 ISO (PMID:9671726) HGNC PMID:9671726 NCBI chr 5:48,382,696...48,417,349
Ensembl chr 5:50,036,475...50,071,457
JBrowse link
G TRPM2 transient receptor potential cation channel subfamily M member 2 ISO (MGI:MGI:5298324|PMID:21753080) UniProtKB PMID:21753080 MGI:MGI:5298324 NCBI chr21:30,606,825...30,737,313
Ensembl chr21:43,903,811...44,035,298
JBrowse link
G UBA1 ubiquitin like modifier activating enzyme 1 colocalizes_with ISO (PMID:1376922) UniProtKB PMID:1376922 NCBI chr  X:39,627,753...39,652,023
Ensembl chr  X:47,493,331...47,509,654
JBrowse link
G UBXN6 UBX domain protein 6 ISO (PMID:21822278) UniProtKB PMID:21822278 NCBI chr19:3,463,259...3,475,428
Ensembl chr19:4,410,952...4,423,092
JBrowse link
G VAMP7 vesicle associated membrane protein 7 ISO PMID:10459012 RGD
UniProt
PMID:10459012, PMID:15133481 RGD:4892614, RGD:8554473 NCBI chr  X:145,362,432...145,425,097
Ensembl chr  X:155,257,185...155,320,215
JBrowse link
G VAMP8 vesicle associated membrane protein 8 ISO (PMID:23217709) UniProtKB
RGD
PMID:15133481, PMID:23217709 RGD:4892614 NCBI chr2A:85,627,678...85,632,205
Ensembl chr2A:87,180,681...87,185,195
JBrowse link
G VPS13A vacuolar protein sorting 13 homolog A ISO (PMID:30709847) UniProt PMID:30709847 NCBI chr 9:47,424,921...47,668,150
Ensembl chr 9:76,032,286...76,269,636
JBrowse link
G VPS39 VPS39 subunit of HOPS complex ISO (PMID:23167963) UniProtKB PMID:23167963 NCBI chr15:21,113,047...21,162,738
Ensembl chr15:39,273,546...39,323,196
JBrowse link
G VPS41 VPS41 subunit of HOPS complex ISO (PMID:23167963) UniProtKB PMID:23167963 NCBI chr 7:39,355,578...39,543,281
Ensembl chr 7:39,590,587...39,776,937
JBrowse link
G VTI1B vesicle transport through interaction with t-SNAREs 1B ISO (PMID:18033301), (PMID:23217709) UniProtKB PMID:18033301, PMID:23217709 NCBI chr14:48,227,203...48,254,990
Ensembl chr14:67,105,160...67,134,351
JBrowse link
G WDR24 WD repeat domain 24 ISO (PMID:28199306) UniProtKB PMID:28199306 Ensembl chr16:699,142...704,869 JBrowse link
G WDR59 WD repeat domain 59 ISO (PMID:28199306) UniProtKB PMID:28199306 NCBI chr16:55,438,945...55,553,937
Ensembl chr16:74,792,207...74,905,582
JBrowse link
G WDR81 WD repeat domain 81 ISO (PMID:27126989) UniProtKB PMID:27126989 NCBI chr17:1,708,119...1,722,405
Ensembl chr17:1,594,162...1,616,138
JBrowse link
lysosomal proton-transporting V-type ATPase complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SPAAR small regulatory polypeptide of amino acid response colocalizes_with ISO (PMID:28024296) UniProtKB PMID:28024296 NCBI chr 9:35,760,064...35,762,224
Ensembl chr 9:36,563,148...36,563,420
JBrowse link
phagolysosome membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HRG histidine rich glycoprotein ISO (MGI:MGI:5527134|PMID:23395172) MGI PMID:23395172 MGI:MGI:5527134 NCBI chr 3:183,701,069...183,712,365
Ensembl chr 3:192,168,299...192,180,539
JBrowse link
G LAMP1 lysosomal associated membrane protein 1 ISO (MGI:MGI:5527134|PMID:23395172) MGI PMID:23395172 MGI:MGI:5527134 NCBI chr13:94,442,507...94,464,061
Ensembl chr13:113,507,401...113,530,457
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 12666
    cellular anatomical entity 12562
      cytoplasm 8250
        vacuole 414
          vacuolar membrane 154
            lytic vacuole membrane 123
              fungal-type vacuole membrane + 0
              lysosomal membrane + 123
Path 2
Term Annotations click to browse term
  cellular_component 12666
    cellular anatomical entity 12562
      organelle 9741
        membrane-bounded organelle 8648
          intracellular membrane-bounded organelle 8008
            vacuole 414
              vacuolar membrane 154
                lytic vacuole membrane 123
                  fungal-type vacuole membrane + 0
                  lysosomal membrane + 123
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.