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ONTOLOGY REPORT - ANNOTATIONS


Term:lytic vacuole membrane
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Accession:GO:0098852 term browser browse the term
Definition:The lipid bilayer surrounding a lytic vacuole and separating its contents from the cytoplasm of the cell.


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azurophil granule membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Vamp1 vesicle associated membrane protein 1 NOT ISO (PMID:11391393) UniProtKB PMID:11391393 NCBI chrNW_004955413:4,117,367...4,124,149
Ensembl chrNW_004955413:4,117,367...4,124,149
JBrowse link
G Vamp7 vesicle associated membrane protein 7 ISO (PMID:16677249) UniProtKB PMID:16677249 NCBI chrNW_004955594:20,496...72,648
Ensembl chrNW_004955594:18,727...72,654
JBrowse link
G Vamp8 vesicle associated membrane protein 8 ISO (PMID:16677249) UniProtKB PMID:16677249 NCBI chrNW_004955424:1,922,830...1,926,844
Ensembl chrNW_004955424:1,923,092...1,926,728
JBrowse link
chaperone-mediated autophagy translocation complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lamp2 lysosomal associated membrane protein 2 ISO (PMID:8662539) ParkinsonsUK-UCL PMID:8662539 NCBI chrNW_004955572:1,423,048...1,464,443
Ensembl chrNW_004955572:1,422,981...1,462,622
JBrowse link
cytoplasmic side of lysosomal membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Borcs5 BLOC-1 related complex subunit 5 ISO (PMID:25898167) UniProtKB PMID:25898167 NCBI chrNW_004955413:9,309,766...9,399,378
Ensembl chrNW_004955413:9,309,861...9,399,378
JBrowse link
G Cdip1 cell death inducing p53 target 1 ISO (PMID:27582497) UniProtKB PMID:27582497 NCBI chrNW_004955442:12,895,403...12,913,517
Ensembl chrNW_004955442:12,895,702...12,913,517
JBrowse link
G Gfap glial fibrillary acidic protein ISO PMID:20797626 ParkinsonsUK-UCL PMID:20797626 RGD:10412296 NCBI chrNW_004955451:17,695,835...17,703,894
Ensembl chrNW_004955451:17,695,835...17,703,268
JBrowse link
G Litaf lipopolysaccharide induced TNF factor ISO (PMID:27582497) UniProtKB PMID:27582497 NCBI chrNW_004955442:7,054,418...7,084,973
Ensembl chrNW_004955442:7,077,823...7,083,437
JBrowse link
endolysosome membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clec16a C-type lectin domain containing 16A ISO (MGI:MGI:5603233|PMID:24949970) MGI PMID:24949970 MGI:MGI:5603233 NCBI chrNW_004955442:7,369,616...7,584,052
Ensembl chrNW_004955442:7,368,952...7,584,703
JBrowse link
G Slc15a4 solute carrier family 15 member 4 ISO (PMID:32433612) UniProt PMID:32433612 NCBI chrNW_004955482:2,327,137...2,343,980 JBrowse link
G Tasl TLR adaptor interacting with endolysosomal SLC15A4 ISO (PMID:32433612) UniProt PMID:32433612 NCBI chrNW_004955531:207,614...293,127
Ensembl chrNW_004955531:267,216...293,127
JBrowse link
extrinsic component of lysosome membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rab7a RAB7A, member RAS oncogene family ISO (MGI:MGI:5689086|PMID:23708524) GO_Central PMID:23708524 MGI:MGI:5689086 NCBI chrNW_004955429:15,103,792...15,167,498 JBrowse link
integral component of lysosomal membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp13a2 ATPase cation transporting 13A2 ISO (PMID:26134396) ParkinsonsUK-UCL PMID:26134396 NCBI chrNW_004955527:1,805,854...1,823,623
Ensembl chrNW_004955527:1,806,009...1,823,344
JBrowse link
G Npc1 NPC intracellular cholesterol transporter 1 ISO (PMID:28784760), (PMID:9927649) UniProtKB PMID:9927649, PMID:28784760 NCBI chrNW_004955402:11,699,434...11,742,899
Ensembl chrNW_004955402:11,699,434...11,742,899
JBrowse link
G Slc15a4 solute carrier family 15 member 4 ISO (PMID:25238095), (PMID:29224352)
(MGI:MGI:6112943|PMID:29155995), (MGI:MGI:6278628|PMID:21277849)
UniProt PMID:21277849, PMID:25238095, PMID:29155995, PMID:29224352 MGI:MGI:6112943, MGI:MGI:6278628 NCBI chrNW_004955482:2,327,137...2,343,980 JBrowse link
G Slc38a9 solute carrier family 38 member 9 ISO (PMID:29053970) UniProt PMID:29053970 NCBI chrNW_004955446:12,042,848...12,132,211
Ensembl chrNW_004955446:12,042,313...12,132,211
JBrowse link
G Slc46a3 solute carrier family 46 member 3 ISO (PMID:26631267) FlyBase PMID:26631267 NCBI chrNW_004955497:8,015,244...8,034,195
Ensembl chrNW_004955497:8,015,017...8,033,302
JBrowse link
lysosomal membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb9 ATP binding cassette subfamily B member 9 ISO (PMID:10748049), (PMID:17977821), (PMID:18952056) UniProtKB PMID:10748049, PMID:17977821, PMID:18952056 NCBI chrNW_004955482:5,817,334...5,838,642
Ensembl chrNW_004955482:5,817,334...5,837,220
JBrowse link
G Abcd1 ATP binding cassette subfamily D member 1 ISO (PMID:16946495) UniProtKB PMID:16946495 NCBI chrNW_004955580:459,715...475,363
Ensembl chrNW_004955580:459,715...475,774
JBrowse link
G Abcd4 ATP binding cassette subfamily D member 4 ISO (PMID:27456980) UniProt PMID:27456980 NCBI chrNW_004955523:1,170,306...1,181,352
Ensembl chrNW_004955523:1,170,303...1,182,467
JBrowse link
G Abhd6 abhydrolase domain containing 6, acylglycerol lipase ISO (MGI:MGI:5700445|PMID:26491015) UniProt PMID:26491015 MGI:MGI:5700445 NCBI chrNW_004955430:1,809,969...1,861,441
Ensembl chrNW_004955430:1,808,924...1,861,441
JBrowse link
G Anxa2 annexin A2 ISO (PMID:23360953) UniProtKB PMID:23360953 NCBI chrNW_004955450:14,545,586...14,574,161
Ensembl chrNW_004955450:14,512,381...14,574,696
JBrowse link
G Anxa6 annexin A6 ISO (PMID:23360953) UniProtKB PMID:23360953 NCBI chrNW_004955408:2,522,027...2,565,862
Ensembl chrNW_004955408:2,522,027...2,570,426
JBrowse link
G Arl8b ADP ribosylation factor like GTPase 8B colocalizes_with ISO (PMID:25898167) UniProtKB PMID:25898167 NCBI chrNW_004955421:8,231,337...8,276,907
Ensembl chrNW_004955421:8,231,582...8,276,907
JBrowse link
G Atp13a2 ATPase cation transporting 13A2 ISO (PMID:23499937) ParkinsonsUK-UCL PMID:23499937 NCBI chrNW_004955527:1,805,854...1,823,623
Ensembl chrNW_004955527:1,806,009...1,823,344
JBrowse link
G Atp6v1g1 ATPase H+ transporting V1 subunit G1 ISO (MGI:MGI:2387737|PMID:12133826) MGI PMID:12133826 MGI:MGI:2387737 NCBI chrNW_004955419:13,047,755...13,056,113
Ensembl chrNW_004955419:13,047,755...13,056,221
JBrowse link
G Atraid all-trans retinoic acid induced differentiation factor ISO (MGI:MGI:5641105|PMID:25839652) CACAO PMID:25839652 MGI:MGI:5641105 NCBI chrNW_004955469:9,194,656...9,203,292 JBrowse link
G Cd63 CD63 molecule ISO (PMID:22431521), (PMID:23632027) UniProtKB PMID:22431521, PMID:23632027 NCBI chrNW_004955458:3,362,511...3,363,916
Ensembl chrNW_004955458:3,362,511...3,363,981
JBrowse link
G Clcn3 chloride voltage-gated channel 3 ISO (MGI:MGI:6414690|PMID:28972156), (MGI:MGI:6414716|PMID:26342074) UniProt PMID:26342074, PMID:28972156 MGI:MGI:6414690, MGI:MGI:6414716 NCBI chrNW_004955403:36,625,871...36,710,201
Ensembl chrNW_004955403:36,625,770...36,710,201
JBrowse link
G Clcn4 chloride voltage-gated channel 4 ISO (PMID:28972156) UniProt PMID:28972156 NCBI chrNW_004955544:2,922,338...2,999,979
Ensembl chrNW_004955544:2,922,338...3,000,112
JBrowse link
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin ISO (PMID:15598649), (PMID:23840424)
(PMID:10332042), (PMID:9384607)
UniProt PMID:9384607, PMID:10332042, PMID:15598649, PMID:23840424 NCBI chrNW_004955493:6,696,520...6,707,849 JBrowse link
G Cln5 CLN5 intracellular trafficking protein ISO (PMID:12134079) UniProtKB PMID:12134079 NCBI chrNW_004955404:30,229,632...30,235,677 JBrowse link
G Ctns cystinosin, lysosomal cystine transporter ISO (PMID:11150305) UniProtKB PMID:11150305 NCBI chrNW_004955467:13,151,663...13,169,005
Ensembl chrNW_004955467:13,151,957...13,168,696
JBrowse link
G Ctsa cathepsin A ISO PMID:12505983 ParkinsonsUK-UCL PMID:12505983 RGD:10412300 NCBI chrNW_004955445:11,399,151...11,405,069
Ensembl chrNW_004955445:11,399,151...11,405,069
JBrowse link
G Ctsd cathepsin D ISO (PMID:17188016) ARUK-UCL PMID:17188016 NCBI chrNW_004955422:13,576,315...13,584,267 JBrowse link
G Depdc5 DEP domain containing 5, GATOR1 subcomplex subunit ISO (PMID:28199306) UniProtKB PMID:28199306 NCBI chrNW_004955455:5,881,631...6,005,514 JBrowse link
G Ffar4 free fatty acid receptor 4 ISO (PMID:22282525) UniProt PMID:22282525 NCBI chrNW_004955507:81,910...110,047
Ensembl chrNW_004955507:81,284...110,047
JBrowse link
G Flcn folliculin ISO (PMID:24081491), (PMID:24095279), (PMID:27113757), (PMID:29848618), (PMID:31672913) UniProt PMID:24081491, PMID:24095279, PMID:27113757, PMID:29848618, PMID:31672913 NCBI chrNW_004955577:672,774...694,140 JBrowse link
G Fnip1 folliculin interacting protein 1 ISO (PMID:24081491), (PMID:29848618) UniProt PMID:24081491, PMID:29848618 NCBI chrNW_004955408:3,117,258...3,238,223
Ensembl chrNW_004955408:3,117,277...3,238,223
JBrowse link
G Gba glucosylceramidase beta ISO (PMID:17187079)
(MGI:MGI:3773765|PMID:18022370)
UniProt
BHF-UCL
PMID:17187079, PMID:18022370 MGI:MGI:3773765 NCBI chrNW_004955545:1,682,097...1,689,373
Ensembl chrNW_004955545:1,682,097...1,689,376
JBrowse link
G Gpr137 G protein-coupled receptor 137 ISO (PMID:31036939) UniProt PMID:31036939 NCBI chrNW_004955422:20,791,144...20,795,451
Ensembl chrNW_004955422:20,790,104...20,795,423
JBrowse link
G Gpr137b G protein-coupled receptor 137B ISO (PMID:31036939)
(MGI:MGI:6362357|PMID:31173907)
UniProt PMID:31036939, PMID:31173907 MGI:MGI:6362357 NCBI chrNW_004955492:3,916,536...3,952,330
Ensembl chrNW_004955492:3,916,536...3,952,330
JBrowse link
G Gpr137c G protein-coupled receptor 137C ISO (PMID:31036939) UniProt PMID:31036939 NCBI chrNW_004955409:10,533,840...10,592,130
Ensembl chrNW_004955409:10,533,840...10,592,130
JBrowse link
G Gpr143 G protein-coupled receptor 143 ISO (PMID:16621890) UniProtKB PMID:16621890 NCBI chrNW_004955499:7,900,276...7,953,847
Ensembl chrNW_004955499:7,909,019...7,928,431
JBrowse link
G Grn granulin precursor ISO (PMID:21092856) UniProt PMID:21092856 NCBI chrNW_004955451:17,368,600...17,371,981
Ensembl chrNW_004955451:17,368,428...17,372,377
JBrowse link
G Hgsnat heparan-alpha-glucosaminide N-acetyltransferase ISO (PMID:19823584), (PMID:20650889) UniProtKB PMID:19823584, PMID:20650889 NCBI chrNW_004955457:13,351,963...13,386,521
Ensembl chrNW_004955457:13,349,213...13,387,251
JBrowse link
G Hps6 HPS6 biogenesis of lysosomal organelles complex 2 subunit 3 ISO (PMID:25189619) UniProtKB PMID:25189619 NCBI chrNW_004955485:8,270,997...8,273,060
Ensembl chrNW_004955485:8,271,134...8,273,056
JBrowse link
G Hsp90ab1 heat shock protein 90 alpha family class B member 1 ISO PMID:18644871 ParkinsonsUK-UCL PMID:18644871 RGD:10412301 NCBI chrNW_004955437:9,872,649...9,878,459
Ensembl chrNW_004955437:9,873,908...9,878,459
JBrowse link
G Hspa8 heat shock protein family A (Hsp70) member 8 ISO PMID:18644871 ParkinsonsUK-UCL
RGD
PMID:9038169, PMID:18644871 RGD:10059368, RGD:10412301 NCBI chrNW_004955412:23,863,513...23,867,984
Ensembl chrNW_004955412:23,862,590...23,867,984
JBrowse link
G Itfg2 integrin alpha FG-GAP repeat containing 2 ISO (PMID:28199306) UniProtKB PMID:28199306 NCBI chrNW_004955429:18,356,642...18,372,928
Ensembl chrNW_004955429:18,356,642...18,372,928
JBrowse link
G Lamp2 lysosomal associated membrane protein 2 ISO PMID:8662539
PMID:11082038
PMID:18644871
(PMID:15297306), (PMID:21896273)
(MGI:MGI:3773765|PMID:18022370), (MGI:MGI:5291841|PMID:21896273)
ParkinsonsUK-UCL
MGI
BHF-UCL
PMID:8662539, PMID:11082038, PMID:15297306, PMID:18022370, PMID:18644871, PMID:21896273 MGI:MGI:3773765, MGI:MGI:5291841, RGD:10412301, RGD:10412302, RGD:1581607 NCBI chrNW_004955572:1,423,048...1,464,443
Ensembl chrNW_004955572:1,422,981...1,462,622
JBrowse link
G Lamp3 lysosomal associated membrane protein 3 ISO (MGI:MGI:2675198|PMID:12938238) MGI PMID:12938238 MGI:MGI:2675198 NCBI chrNW_004955420:24,155,793...24,185,366 JBrowse link
G Laptm4a lysosomal protein transmembrane 4 alpha ISO (PMID:22096579) UniProtKB PMID:22096579 NCBI chrNW_004955469:2,604,464...2,626,835
Ensembl chrNW_004955469:2,604,464...2,627,043
JBrowse link
G Laptm4b lysosomal protein transmembrane 4 beta ISO (PMID:21224396), (PMID:22096579) UniProtKB PMID:21224396, PMID:22096579 NCBI chrNW_004955417:13,574,493...13,625,669
Ensembl chrNW_004955417:13,574,721...13,625,313
JBrowse link
G Litaf lipopolysaccharide induced TNF factor ISO (PMID:11274176) MGI PMID:11274176 NCBI chrNW_004955442:7,054,418...7,084,973
Ensembl chrNW_004955442:7,077,823...7,083,437
JBrowse link
G LOC102016503 cytochrome b ascorbate-dependent protein 3 ISO (MGI:MGI:3695337|PMID:16996694) UniProtKB PMID:16996694 MGI:MGI:3695337 NCBI chrNW_004955511:6,191,644...6,200,099
Ensembl chrNW_004955511:6,191,645...6,200,099
JBrowse link
G LOC102019320 mamu class II histocompatibility antigen, DR alpha chain ISO (PMID:18305173) UniProtKB PMID:18305173 NCBI chrNW_004955437:1,109,735...1,114,742
Ensembl chrNW_004955437:1,109,713...1,114,802
JBrowse link
G LOC102023521 HLA class II histocompatibility antigen, DM beta chain ISO (MGI:MGI:3033877|PMID:7584146) MGI PMID:7584146 MGI:MGI:3033877 NCBI chrNW_004955437:1,544,906...1,551,412 JBrowse link
G LOC102023843 HLA class II histocompatibility antigen, DM alpha chain ISO (MGI:MGI:3033762|PMID:7985028) MGI PMID:7985028 MGI:MGI:3033762 NCBI chrNW_004955437:1,558,806...1,562,294
Ensembl chrNW_004955437:1,558,911...1,562,162
JBrowse link
G Marchf1 membrane associated ring-CH-type finger 1 ISO (MGI:MGI:4430128|PMID:19880452) UniProtKB PMID:19880452 MGI:MGI:4430128 NCBI chrNW_004955403:41,187,039...41,484,734
Ensembl chrNW_004955403:41,060,246...41,484,734
JBrowse link
G Mcoln1 mucolipin 1 ISO RGD PMID:17613490 RGD:7205504 NCBI chrNW_004955563:1,703,408...1,712,908
Ensembl chrNW_004955563:1,703,416...1,745,996
JBrowse link
G Meak7 MTOR associated protein, eak-7 homolog ISO (PMID:29750193) UniProt PMID:29750193 NCBI chrNW_004955541:99,319...114,122
Ensembl chrNW_004955541:101,275...115,079
JBrowse link
G Mios meiosis regulator for oocyte development ISO (PMID:28199306) UniProtKB PMID:28199306 NCBI chrNW_004955432:14,658,624...14,693,116
Ensembl chrNW_004955432:14,657,973...14,693,116
JBrowse link
G Mtor mechanistic target of rapamycin kinase ISO (PMID:30956113) UniProt PMID:30956113 NCBI chrNW_004955486:2,487,642...2,599,694
Ensembl chrNW_004955486:2,487,642...2,599,694
JBrowse link
G Myo7a myosin VIIA ISO (PMID:16001398) UniProtKB PMID:16001398 NCBI chrNW_004955414:14,576,356...14,647,500
Ensembl chrNW_004955414:14,576,356...14,647,500
JBrowse link
G Ncstn nicastrin ISO RGD PMID:12736250 RGD:724403 NCBI chrNW_004955468:12,111,078...12,126,404
Ensembl chrNW_004955468:12,111,078...12,127,033
JBrowse link
G Neu3 neuraminidase 3 ISO (PMID:26251452) UniProt PMID:26251452 NCBI chrNW_004955414:16,783,996...16,798,368
Ensembl chrNW_004955414:16,788,171...16,798,535
JBrowse link
G Nprl2 NPR2 like, GATOR1 complex subunit ISO (PMID:28199306) UniProtKB PMID:28199306 NCBI chrNW_004955532:2,148,950...2,152,671
Ensembl chrNW_004955532:2,148,950...2,152,671
JBrowse link
G Nprl3 NPR3 like, GATOR1 complex subunit ISO (PMID:28199306) UniProtKB PMID:28199306 NCBI chrNW_004955442:17,025,232...17,068,399
Ensembl chrNW_004955442:17,025,194...17,070,753
JBrowse link
G Oca2 OCA2 melanosomal transmembrane protein ISO (PMID:19116314) UniProtKB PMID:19116314 NCBI chrNW_004955533:1,522,878...1,796,673
Ensembl chrNW_004955533:1,522,795...1,797,116
JBrowse link
G Ocln occludin ISO (PMID:28718701) ARUK-UCL PMID:28718701 NCBI chrNW_004955575:163,646...210,379 JBrowse link
G Pip4p1 phosphatidylinositol-4,5-bisphosphate 4-phosphatase 1 ISO (MGI:MGI:6304515|PMID:29644770)
(PMID:16365287), (PMID:29146937)
UniProt
FlyBase
PMID:16365287, PMID:29146937, PMID:29644770 MGI:MGI:6304515 NCBI chrNW_004955550:1,275,921...1,279,262
Ensembl chrNW_004955550:1,275,921...1,279,270
JBrowse link
G Pip4p2 phosphatidylinositol-4,5-bisphosphate 4-phosphatase 2 ISO (PMID:16365287) FlyBase PMID:16365287 NCBI chrNW_004955417:7,769,365...7,825,892
Ensembl chrNW_004955417:7,771,218...7,825,799
JBrowse link
G Pla2g4e phospholipase A2 group IVE ISO (MGI:MGI:6161105|PMID:29447909) UniProt PMID:29447909 MGI:MGI:6161105 NCBI chrNW_004955416:8,765,620...8,826,184
Ensembl chrNW_004955416:8,765,561...8,804,616
JBrowse link
G Pld3 phospholipase D family member 3 ISO (MGI:MGI:6115966|PMID:28128235) UniProt PMID:28128235 MGI:MGI:6115966 NCBI chrNW_004955578:884,700...905,426
Ensembl chrNW_004955578:884,700...894,433
JBrowse link
G Psen1 presenilin 1 ISO RGD PMID:12736250 RGD:724403 NCBI chrNW_004955523:2,128,529...2,210,737
Ensembl chrNW_004955523:2,128,529...2,210,737
JBrowse link
G Rnf13 ring finger protein 13 ISO (MGI:MGI:3844769|PMID:19292867) UniProtKB PMID:19292867 MGI:MGI:3844769 NCBI chrNW_004955448:1,053,676...1,195,612 JBrowse link
G Rnf152 ring finger protein 152 ISO (PMID:25936802) UniProtKB PMID:25936802 NCBI chrNW_004955402:45,774,565...45,846,649
Ensembl chrNW_004955402:45,774,565...45,846,518
JBrowse link
G Rnf183 ring finger protein 183 ISO (MGI:MGI:6113025|PMID:29300766) UniProt PMID:29300766 MGI:MGI:6113025 NCBI chrNW_004955419:14,181,073...14,189,230
Ensembl chrNW_004955419:14,181,073...14,189,230
JBrowse link
G Scarb2 scavenger receptor class B member 2 ISO (MGI:MGI:3773765|PMID:18022370) BHF-UCL PMID:18022370 MGI:MGI:3773765 NCBI chrNW_004955433:884,740...962,932
Ensembl chrNW_004955433:884,740...962,932
JBrowse link
G Sec13 SEC13 homolog, nuclear pore and COPII coat complex component ISO (PMID:28199306) UniProtKB PMID:28199306 NCBI chrNW_004955561:1,707,053...1,723,715
Ensembl chrNW_004955561:1,707,053...1,723,862
JBrowse link
G Seh1l SEH1 like nucleoporin ISO (PMID:28199306) UniProtKB PMID:28199306 NCBI chrNW_004955402:679,109...698,624
Ensembl chrNW_004955402:681,436...698,624
JBrowse link
G Sidt2 SID1 transmembrane family member 2 ISO (MGI:MGI:4867132|PMID:20965152)
(PMID:17897319)
UniProtKB PMID:17897319, PMID:20965152 MGI:MGI:4867132 NCBI chrNW_004955412:18,505,453...18,521,667
Ensembl chrNW_004955412:18,505,453...18,522,082
JBrowse link
G Slc15a3 solute carrier family 15 member 3 ISO (MGI:MGI:5571205|PMID:24695226) RGD
UniProt
PMID:11336635, PMID:24695226 MGI:MGI:5571205, RGD:633591 NCBI chrNW_004955511:5,574,686...5,582,992
Ensembl chrNW_004955511:5,574,840...5,582,307
JBrowse link
G Slc15a4 solute carrier family 15 member 4 ISO (MGI:MGI:5571205|PMID:24695226) UniProt PMID:24695226 MGI:MGI:5571205 NCBI chrNW_004955482:2,327,137...2,343,980 JBrowse link
G Slc17a5 solute carrier family 17 member 5 ISO (PMID:3961501) MGI PMID:3961501 NCBI chrNW_004955493:8,693,933...8,719,250
Ensembl chrNW_004955493:8,693,679...8,719,250
JBrowse link
G Slc26a11 solute carrier family 26 member 11 ISO (PMID:20957757) UniProtKB PMID:20957757 NCBI chrNW_004955506:2,683,637...2,701,889
Ensembl chrNW_004955506:2,684,259...2,700,837
JBrowse link
G Slc2a6 solute carrier family 2 member 6 ISO (PMID:30431159) UniProt PMID:30431159 NCBI chrNW_004955513:2,796,086...2,802,051
Ensembl chrNW_004955513:2,796,531...2,802,054
JBrowse link
G Slc35f6 solute carrier family 35 member F6 ISO (PMID:20957757) UniProtKB PMID:20957757 NCBI chrNW_004955469:8,774,225...8,787,549
Ensembl chrNW_004955469:8,773,989...8,787,549
JBrowse link
G Slc38a9 solute carrier family 38 member 9 ISO (PMID:30956113) UniProt PMID:30956113 NCBI chrNW_004955446:12,042,848...12,132,211
Ensembl chrNW_004955446:12,042,313...12,132,211
JBrowse link
G Slc39a14 solute carrier family 39 member 14 ISO (PMID:20682781) UniProt PMID:20682781 NCBI chrNW_004955403:45,828,247...45,867,309
Ensembl chrNW_004955403:45,827,942...45,867,309
JBrowse link
G Slc39a8 solute carrier family 39 member 8 ISO (PMID:18390834), (PMID:19401385) UniProt PMID:18390834, PMID:19401385 NCBI chrNW_004955496:6,016,727...6,106,965
Ensembl chrNW_004955496:6,040,029...6,109,907
JBrowse link
G Slc48a1 solute carrier family 48 member 1 ISO (PMID:18418376) WormBase PMID:18418376 NCBI chrNW_004955500:6,675,631...6,691,942
Ensembl chrNW_004955500:6,679,908...6,691,942
JBrowse link
G Slc66a1 solute carrier family 66 member 1 ISO PMID:23169667
(PMID:22822152)
UniProt
UniProtKB
PMID:22822152, PMID:23169667 RGD:8553575 NCBI chrNW_004955452:17,459...22,259
Ensembl chrNW_004955452:16,770...26,189
JBrowse link
G Spag9 sperm associated antigen 9 ISO (PMID:29146937) UniProt PMID:29146937 NCBI chrNW_004955451:10,800,251...10,895,400
Ensembl chrNW_004955451:10,800,128...10,895,400
JBrowse link
G Sppl2a signal peptide peptidase like 2A ISO (MGI:MGI:5291841|PMID:21896273) MGI PMID:21896273 MGI:MGI:5291841 NCBI chrNW_004955409:3,642,113...3,670,779
Ensembl chrNW_004955409:3,645,555...3,670,551
JBrowse link
G Sppl2b signal peptide peptidase like 2B ISO (PMID:15998642) UniProtKB PMID:15998642 NCBI chrNW_004955495:5,816,979...5,829,938
Ensembl chrNW_004955495:5,818,337...5,829,889
JBrowse link
G Stx17 syntaxin 17 NOT ISO (PMID:10930465) UniProtKB PMID:10930465 NCBI chrNW_004955419:25,674,771...25,741,357
Ensembl chrNW_004955419:25,674,771...25,741,355
JBrowse link
G Stx7 syntaxin 7 ISO RGD PMID:15133481 RGD:4892614 NCBI chrNW_004955436:12,928,274...12,975,745 JBrowse link
G Stx8 syntaxin 8 ISO RGD PMID:15133481 RGD:4892614 NCBI chrNW_004955467:7,524,223...7,789,630
Ensembl chrNW_004955467:7,523,464...7,792,056
JBrowse link
G Szt2 SZT2 subunit of KICSTOR complex ISO (PMID:28199315) UniProtKB PMID:28199315 NCBI chrNW_004955537:2,968,839...3,017,863
Ensembl chrNW_004955537:2,968,839...3,017,863
JBrowse link
G Tecpr1 tectonin beta-propeller repeat containing 1 ISO (PMID:22342342) UniProtKB PMID:22342342 NCBI chrNW_004955460:14,106,711...14,137,983
Ensembl chrNW_004955460:14,106,711...14,138,033
JBrowse link
G Tfeb transcription factor EB ISO (PMID:22343943), (PMID:22692423) UniProt PMID:22343943, PMID:22692423 NCBI chrNW_004955437:8,102,241...8,141,001
Ensembl chrNW_004955437:8,098,976...8,141,001
JBrowse link
G Tm4sf5 transmembrane 4 L six family member 5 ISO (PMID:30956113) UniProt PMID:30956113 NCBI chrNW_004955467:10,178,892...10,196,230
Ensembl chrNW_004955467:10,184,856...10,199,543
JBrowse link
G Tm6sf1 transmembrane 6 superfamily member 1 ISO (MGI:MGI:5619893|PMID:25422095) UniProtKB PMID:25422095 MGI:MGI:5619893 NCBI chrNW_004955416:13,561,872...13,584,238
Ensembl chrNW_004955416:13,561,880...13,584,454
JBrowse link
G Tmbim1 transmembrane BAX inhibitor motif containing 1 ISO (PMID:16607040) UniProtKB PMID:16607040 NCBI chrNW_004955453:15,083,179...15,100,197
Ensembl chrNW_004955453:15,092,522...15,099,021
JBrowse link
G Tmem106b transmembrane protein 106B ISO (PMID:24357581) UniProtKB PMID:24357581 NCBI chrNW_004955432:18,619,418...18,644,876
Ensembl chrNW_004955432:18,619,413...18,639,151
JBrowse link
G Tmem165 transmembrane protein 165 ISO (PMID:23575229) UniProtKB PMID:23575229 NCBI chrNW_004955447:15,538,958...15,543,885
Ensembl chrNW_004955447:15,538,958...15,543,892
JBrowse link
G Tmem192 transmembrane protein 192 ISO (PMID:20370317) UniProtKB PMID:20370317 NCBI chrNW_004955403:40,202,180...40,211,747
Ensembl chrNW_004955403:40,199,850...40,212,765
JBrowse link
G Tmem79 transmembrane protein 79 ISO (MGI:MGI:5518480|PMID:24060273) UniProtKB PMID:24060273 MGI:MGI:5518480 NCBI chrNW_004955545:2,420,594...2,436,485
Ensembl chrNW_004955545:2,420,592...2,436,485
JBrowse link
G Tmem9 transmembrane protein 9 ISO (PMID:30374053) UniProt PMID:30374053 NCBI chrNW_004955406:37,279,885...37,299,196
Ensembl chrNW_004955406:37,279,694...37,314,251
JBrowse link
G Tpcn1 two pore segment channel 1 ISO (PMID:19620632) UniProtKB PMID:19620632 NCBI chrNW_004955482:9,538,572...9,594,739
Ensembl chrNW_004955482:9,542,079...9,592,972
JBrowse link
G Tpcn2 two pore segment channel 2 ISO (PMID:19387438), (PMID:19620632)
(MGI:MGI:5285171|PMID:19557428)
UniProtKB PMID:19387438, PMID:19557428, PMID:19620632 MGI:MGI:5285171 NCBI chrNW_004955422:16,899,730...16,923,962 JBrowse link
G Treml4 triggering receptor expressed on myeloid cells like 4 colocalizes_with ISO (MGI:MGI:5775261|PMID:25848864) UniProtKB PMID:25848864 MGI:MGI:5775261 NCBI chrNW_004955437:7,827,329...7,846,406 JBrowse link
G Trim23 tripartite motif containing 23 ISO (PMID:9671726) HGNC PMID:9671726 NCBI chrNW_004955446:3,480,177...3,509,050
Ensembl chrNW_004955446:3,479,858...3,509,050
JBrowse link
G Trpm2 transient receptor potential cation channel subfamily M member 2 ISO (MGI:MGI:5298324|PMID:21753080) UniProtKB PMID:21753080 MGI:MGI:5298324 NCBI chrNW_004955407:41,062,217...41,110,500
Ensembl chrNW_004955407:41,057,941...41,110,668
JBrowse link
G Uba1 ubiquitin like modifier activating enzyme 1 colocalizes_with ISO (PMID:1376922) UniProtKB PMID:1376922 NCBI chrNW_004955516:876,542...898,763
Ensembl chrNW_004955516:876,354...891,206
JBrowse link
G Ubxn6 UBX domain protein 6 ISO (PMID:21822278) UniProtKB PMID:21822278 NCBI chrNW_004955495:4,456,182...4,465,954
Ensembl chrNW_004955495:4,456,308...4,466,254
JBrowse link
G Vamp7 vesicle associated membrane protein 7 ISO PMID:10459012 RGD
UniProt
PMID:10459012, PMID:15133481 RGD:4892614, RGD:8554473 NCBI chrNW_004955594:20,496...72,648
Ensembl chrNW_004955594:18,727...72,654
JBrowse link
G Vamp8 vesicle associated membrane protein 8 ISO (PMID:23217709) RGD
UniProtKB
PMID:15133481, PMID:23217709 RGD:4892614 NCBI chrNW_004955424:1,922,830...1,926,844
Ensembl chrNW_004955424:1,923,092...1,926,728
JBrowse link
G Vps13a vacuolar protein sorting 13 homolog A ISO (PMID:30709847) UniProt PMID:30709847 NCBI chrNW_004955512:2,037,803...2,267,197
Ensembl chrNW_004955512:2,039,115...2,267,099
JBrowse link
G Vps39 VPS39 subunit of HOPS complex ISO (PMID:23167963) UniProtKB PMID:23167963 NCBI chrNW_004955416:8,893,249...8,936,351
Ensembl chrNW_004955416:8,893,249...8,936,351
JBrowse link
G Vps41 VPS41 subunit of HOPS complex ISO (PMID:23167963) UniProtKB PMID:23167963 NCBI chrNW_004955460:4,555,870...4,749,154
Ensembl chrNW_004955460:4,555,870...4,749,153
JBrowse link
G Vti1b vesicle transport through interaction with t-SNAREs 1B ISO (PMID:18033301), (PMID:23217709) UniProtKB PMID:18033301, PMID:23217709 NCBI chrNW_004955466:2,527,750...2,549,599
Ensembl chrNW_004955466:2,527,753...2,549,568
JBrowse link
G Wdr24 WD repeat domain 24 ISO (PMID:28199306) UniProtKB PMID:28199306 NCBI chrNW_004955442:16,513,074...16,519,296
Ensembl chrNW_004955442:16,513,448...16,519,296
JBrowse link
G Wdr59 WD repeat domain 59 ISO (PMID:28199306) UniProtKB PMID:28199306 NCBI chrNW_004955484:2,576,505...2,668,001
Ensembl chrNW_004955484:2,576,208...2,670,324
JBrowse link
G Wdr81 WD repeat domain 81 ISO (PMID:27126989) UniProtKB PMID:27126989 NCBI chrNW_004955481:1,450,127...1,462,564
Ensembl chrNW_004955481:1,449,350...1,462,555
JBrowse link
phagolysosome membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hrg histidine rich glycoprotein ISO (MGI:MGI:5527134|PMID:23395172) MGI PMID:23395172 MGI:MGI:5527134 NCBI chrNW_004955420:21,020,938...21,033,022
Ensembl chrNW_004955420:21,019,212...21,032,976
JBrowse link
G Lamp1 lysosomal associated membrane protein 1 ISO (MGI:MGI:5527134|PMID:23395172) MGI PMID:23395172 MGI:MGI:5527134 NCBI chrNW_004955404:557,090...573,532
Ensembl chrNW_004955404:557,862...573,379
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 12025
    cellular anatomical entity 11935
      cytoplasm 7908
        vacuole 401
          vacuolar membrane 153
            lytic vacuole membrane 121
              fungal-type vacuole membrane + 0
              lysosomal membrane + 121
Path 2
Term Annotations click to browse term
  cellular_component 12025
    cellular anatomical entity 11935
      organelle 9322
        membrane-bounded organelle 8266
          intracellular membrane-bounded organelle 7658
            vacuole 401
              vacuolar membrane 153
                lytic vacuole membrane 121
                  fungal-type vacuole membrane + 0
                  lysosomal membrane + 121
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.