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ONTOLOGY REPORT - ANNOTATIONS


Term:lytic vacuole membrane
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Accession:GO:0098852 term browser browse the term
Definition:The lipid bilayer surrounding a lytic vacuole and separating its contents from the cytoplasm of the cell.


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azurophil granule membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Vamp1 vesicle-associated membrane protein 1 NOT ISO (PMID:11391393) UniProtKB PMID:11391393 NCBI chr 6:125,215,581...125,222,306
Ensembl chr 6:125,215,551...125,245,964
JBrowse link
G Vamp7 vesicle-associated membrane protein 7 ISO MGI GO_REF:0000096, MGI:MGI:4834177
G Vamp8 vesicle-associated membrane protein 8 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 6:72,385,221...72,390,667
Ensembl chr 6:72,385,223...72,390,703
JBrowse link
chaperone-mediated autophagy translocation complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lamp2 lysosomal-associated membrane protein 2 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr  X:38,399,647...38,456,460
Ensembl chr  X:38,401,357...38,456,454
JBrowse link
cytoplasmic side of lysosomal membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Borcs5 BLOC-1 related complex subunit 5 ISO
IBA
(MGI:MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000096, MGI:MGI:4834177, MGI:MGI:6201960 NCBI chr 6:134,639,512...134,711,184
Ensembl chr 6:134,639,510...134,711,187
JBrowse link
G Cdip1 cell death inducing Trp53 target 1 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr16:4,765,461...4,790,292
Ensembl chr16:4,750,348...4,790,292
JBrowse link
G Gfap glial fibrillary acidic protein ISO RGD GO_REF:0000096, MGI:MGI:4417868 NCBI chr11:102,887,336...102,897,200
Ensembl chr11:102,887,336...102,900,912
JBrowse link
G Litaf LPS-induced TN factor ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr16:10,959,273...10,993,121
Ensembl chr16:10,959,275...11,066,157
JBrowse link
endolysosome membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clec16a C-type lectin domain family 16, member A IDA
IBA
(MGI:MGI:5603233|PMID:24949970)
(MGI:MGI:6201960|PMID:21873635)
MGI
GO_Central
PMID:21873635, PMID:24949970 MGI:MGI:5603233, MGI:MGI:6201960 NCBI chr16:10,545,309...10,744,878
Ensembl chr16:10,545,339...10,744,878
JBrowse link
G Slc15a4 solute carrier family 15, member 4 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 5:127,594,545...127,633,292
Ensembl chr 5:127,595,664...127,632,897
JBrowse link
G Tasl TLR adaptor interacting with endolysosomal SLC15A4 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr  X:85,776,968...85,891,499
Ensembl chr  X:85,870,354...85,891,499
JBrowse link
extrinsic component of lysosome membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rab7 RAB7, member RAS oncogene family IDA (MGI:MGI:5689086|PMID:23708524) GO_Central PMID:23708524 MGI:MGI:5689086 NCBI chr 6:87,999,106...88,045,270
Ensembl chr 6:87,999,106...88,045,270
JBrowse link
integral component of lysosomal membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp13a2 ATPase type 13A2 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 4:140,986,216...141,007,330
Ensembl chr 4:140,986,873...141,007,330
JBrowse link
G Npc1 NPC intracellular cholesterol transporter 1 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr18:12,189,694...12,236,506
Ensembl chr18:12,189,692...12,236,400
JBrowse link
G Slc15a4 solute carrier family 15, member 4 IDA
ISO
(MGI:MGI:6112943|PMID:29155995), (MGI:MGI:6278628|PMID:21277849) UniProt
MGI
PMID:21277849, PMID:29155995 GO_REF:0000096, MGI:MGI:4834177, MGI:MGI:6112943, MGI:MGI:6278628 NCBI chr 5:127,594,545...127,633,292
Ensembl chr 5:127,595,664...127,632,897
JBrowse link
G Slc38a9 solute carrier family 38, member 9 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr13:112,656,189...112,738,752
Ensembl chr13:112,660,751...112,738,749
JBrowse link
G Slc46a3 solute carrier family 46, member 3 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 5:147,875,897...147,894,861
Ensembl chr 5:147,878,437...147,894,815
JBrowse link
G Spaar small regulatory polypeptide of amino acid response ISO (PMID:28024296) UniProtKB PMID:28024296 NCBI chr 4:43,730,034...43,734,534
Ensembl chr 4:43,730,034...43,759,462
JBrowse link
lysosomal membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca2 ATP-binding cassette, sub-family A (ABC1), member 2 ISO MGI GO_REF:0000008, MGI:MGI:2154458 NCBI chr 2:25,428,599...25,448,544
Ensembl chr 2:25,428,703...25,448,540
JBrowse link
G Abcb9 ATP-binding cassette, sub-family B (MDR/TAP), member 9 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 5:124,061,857...124,095,955
Ensembl chr 5:124,061,530...124,095,798
JBrowse link
G Abcd1 ATP-binding cassette, sub-family D (ALD), member 1 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr  X:73,716,597...73,738,534
Ensembl chr  X:73,716,597...73,738,534
JBrowse link
G Abcd4 ATP-binding cassette, sub-family D (ALD), member 4 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr12:84,601,869...84,617,485
Ensembl chr12:84,601,464...84,617,413
JBrowse link
G Abhd6 abhydrolase domain containing 6 IDA (MGI:MGI:5700445|PMID:26491015) UniProt PMID:26491015 MGI:MGI:5700445 NCBI chr14:8,002,888...8,056,773
Ensembl chr14:8,002,902...8,056,763
JBrowse link
G Anxa2 annexin A2 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 9:69,453,683...69,491,792
Ensembl chr 9:69,453,620...69,491,795
JBrowse link
G Anxa6 annexin A6 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr11:54,978,953...55,033,471
Ensembl chr11:54,979,108...55,033,445
JBrowse link
G Arl8a ADP-ribosylation factor-like 8A IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr 1:135,146,834...135,156,268
Ensembl chr 1:135,146,824...135,156,269
JBrowse link
G Arl8b ADP-ribosylation factor-like 8B colocalizes_with ISO
IBA
(MGI:MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000096, MGI:MGI:4834177, MGI:MGI:6201960 NCBI chr 6:108,783,059...108,823,723
Ensembl chr 6:108,783,099...108,825,278
JBrowse link
G Atp13a2 ATPase type 13A2 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 4:140,986,216...141,007,330
Ensembl chr 4:140,986,873...141,007,330
JBrowse link
G Atp6v0d1 ATPase, H+ transporting, lysosomal V0 subunit D1 IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr 8:105,524,461...105,566,064
Ensembl chr 8:105,524,465...105,566,047
JBrowse link
G Atp6v0d2 ATPase, H+ transporting, lysosomal V0 subunit D2 IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr 4:19,876,838...19,922,566
Ensembl chr 4:19,876,841...19,922,605
JBrowse link
G Atp6v1g1 ATPase, H+ transporting, lysosomal V1 subunit G1 IDA (MGI:MGI:2387737|PMID:12133826) MGI PMID:12133826 MGI:MGI:2387737 NCBI chr 4:63,544,765...63,550,701
Ensembl chr 4:63,544,772...63,550,750
JBrowse link
G Atraid all-trans retinoic acid induced differentiation factor IDA (MGI:MGI:5641105|PMID:25839652) CACAO PMID:25839652 MGI:MGI:5641105 NCBI chr 5:31,048,640...31,054,633
Ensembl chr 5:31,048,312...31,054,623
JBrowse link
G Cd63 CD63 antigen ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr10:128,896,231...128,912,822
Ensembl chr10:128,900,989...128,912,822
JBrowse link
G Cd68 CD68 antigen RCA
IBA
(MGI:MGI:53228|PMID:8486654)
(MGI:MGI:6201960|PMID:21873635)
ARUK-UCL
GO_Central
PMID:8486654, PMID:21873635 MGI:MGI:53228, MGI:MGI:6201960 NCBI chr11:69,664,213...69,666,170
Ensembl chr11:69,664,213...69,666,153
JBrowse link
G Clcn3 chloride channel, voltage-sensitive 3 IDA (MGI:MGI:6414690|PMID:28972156), (MGI:MGI:6414716|PMID:26342074) UniProt PMID:26342074, PMID:28972156 MGI:MGI:6414690, MGI:MGI:6414716 NCBI chr 8:60,910,389...60,983,317
Ensembl chr 8:60,910,389...60,983,300
JBrowse link
G Clcn4 chloride channel, voltage-sensitive 4 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 7:7,282,309...7,300,916
Ensembl chr 7:7,282,309...7,300,851
JBrowse link
G Cln3 ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease) ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 7:126,571,207...126,585,817
Ensembl chr 7:126,571,207...126,585,817
JBrowse link
G Cln5 ceroid-lipofuscinosis, neuronal 5 ISO
IBA
(MGI:MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000096, MGI:MGI:4834177, MGI:MGI:6201960 NCBI chr14:103,070,216...103,077,630
Ensembl chr14:103,070,216...103,077,628
JBrowse link
G Ctns cystinosis, nephropathic ISO
IBA
(MGI:MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000096, MGI:MGI:4834177, MGI:MGI:6201960 NCBI chr11:73,183,133...73,199,115
Ensembl chr11:73,183,596...73,199,042
JBrowse link
G Ctsa cathepsin A ISO MGI GO_REF:0000096, MGI:MGI:4417868 NCBI chr 2:164,832,872...164,841,032
Ensembl chr 2:164,832,873...164,841,032
JBrowse link
G Ctsd cathepsin D ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 7:142,375,910...142,387,827
Ensembl chr 7:142,375,911...142,388,038
JBrowse link
G Cyb561 cytochrome b-561 IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr11:105,933,702...105,945,019
Ensembl chr11:105,933,702...105,953,336
JBrowse link
G Cyb561a3 cytochrome b561 family, member A3 IDA
IBA
(MGI:MGI:3695337|PMID:16996694)
(MGI:MGI:6201960|PMID:21873635)
UniProtKB
GO_Central
PMID:16996694, PMID:21873635 MGI:MGI:3695337, MGI:MGI:6201960 NCBI chr19:10,577,157...10,596,832
Ensembl chr19:10,577,172...10,595,961
JBrowse link
G Cybrd1 cytochrome b reductase 1 IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr 2:71,118,054...71,142,926
Ensembl chr 2:71,117,923...71,142,926
JBrowse link
G Depdc5 DEP domain containing 5 ISO
IBA
(MGI:MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000096, MGI:MGI:4834177, MGI:MGI:6201960 NCBI chr 5:32,863,646...32,994,233
Ensembl chr 5:32,863,701...32,994,236
JBrowse link
G Ffar4 free fatty acid receptor 4 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr19:38,097,079...38,114,263
Ensembl chr19:38,097,071...38,114,263
JBrowse link
G Flcn folliculin ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr11:59,791,408...59,810,039
Ensembl chr11:59,791,408...59,810,016
JBrowse link
G Fnip1 folliculin interacting protein 1 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr11:54,438,107...54,518,241
Ensembl chr11:54,438,199...54,518,235
JBrowse link
G Gba glucosidase, beta, acid IDA
ISO
(MGI:MGI:3773765|PMID:18022370) BHF-UCL
MGI
PMID:18022370 GO_REF:0000096, MGI:MGI:3773765, MGI:MGI:4834177 NCBI chr 3:89,202,905...89,208,873
Ensembl chr 3:89,202,928...89,208,966
JBrowse link
G Gpr137 G protein-coupled receptor 137 ISO
IBA
(MGI:MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000096, MGI:MGI:4834177, MGI:MGI:6201960 NCBI chr19:6,938,057...6,942,450
Ensembl chr19:6,938,057...6,942,480
JBrowse link
G Gpr137b G protein-coupled receptor 137B IMP
IBA
ISO
(MGI:MGI:6362357|PMID:31173907)
(MGI:MGI:6201960|PMID:21873635)
UniProt
GO_Central
MGI
PMID:21873635, PMID:31173907 GO_REF:0000096, MGI:MGI:4834177, MGI:MGI:6201960, MGI:MGI:6362357 NCBI chr13:13,357,620...13,393,644
Ensembl chr13:13,357,620...13,394,014
JBrowse link
G Gpr137c G protein-coupled receptor 137C ISO
IBA
(MGI:MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000096, MGI:MGI:4834177, MGI:MGI:6201960 NCBI chr14:45,219,685...45,282,735
Ensembl chr14:45,219,717...45,282,725
JBrowse link
G Gpr143 G protein-coupled receptor 143 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr  X:152,781,921...152,808,651
Ensembl chr  X:152,781,921...152,808,646
JBrowse link
G Grn granulin ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr11:102,430,507...102,436,809
Ensembl chr11:102,430,315...102,437,048
JBrowse link
G H2-DMa histocompatibility 2, class II, locus DMa IDA (MGI:MGI:3033762|PMID:7985028) MGI PMID:7985028 MGI:MGI:3033762 NCBI chr17:34,119,693...34,139,101
Ensembl chr17:34,119,541...34,139,101
JBrowse link
G H2-DMb2 histocompatibility 2, class II, locus Mb2 IDA (MGI:MGI:3033877|PMID:7584146) MGI PMID:7584146 MGI:MGI:3033877 NCBI chr17:34,143,229...34,151,553
Ensembl chr17:34,143,307...34,151,555
JBrowse link
G H2-Ea histocompatibility 2, class II antigen E alpha ISO (PMID:18305173) UniProtKB PMID:18305173 NCBI chr17:34,341,952...34,344,645
Ensembl chr17:34,341,959...34,344,645
JBrowse link
G H2-Eb1 histocompatibility 2, class II antigen E beta ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr17:34,305,867...34,316,674
Ensembl chr17:34,305,867...34,316,674
JBrowse link
G Hgsnat heparan-alpha-glucosaminide N-acetyltransferase ISO
IBA
(MGI:MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000096, MGI:MGI:4834177, MGI:MGI:6201960 NCBI chr 8:25,944,459...25,976,744
Ensembl chr 8:25,944,453...25,976,753
JBrowse link
G Hps4 HPS4, biogenesis of lysosomal organelles complex 3 subunit 2 IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr 5:112,342,983...112,378,424
Ensembl chr 5:112,343,083...112,378,414
JBrowse link
G Hps6 HPS6, biogenesis of lysosomal organelles complex 2 subunit 3 ISO
IBA
(MGI:MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000096, MGI:MGI:4834177, MGI:MGI:6201960 NCBI chr19:46,003,478...46,006,173
Ensembl chr19:46,003,508...46,006,173
JBrowse link
G Hsp90ab1 heat shock protein 90 alpha (cytosolic), class B member 1 ISO RGD GO_REF:0000096, MGI:MGI:4417868 NCBI chr17:45,567,778...45,573,261
Ensembl chr17:45,567,775...45,573,271
JBrowse link
G Hspa8 heat shock protein 8 ISO RGD
MGI
GO_REF:0000008, GO_REF:0000096, MGI:MGI:2154458, MGI:MGI:4417868 NCBI chr 9:40,801,276...40,805,202
Ensembl chr 9:40,800,984...40,810,087
JBrowse link
G Itfg2 integrin alpha FG-GAP repeat containing 2 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 6:128,409,047...128,424,927
Ensembl chr 6:128,409,444...128,424,931
JBrowse link
G Lamp1 lysosomal-associated membrane protein 1 IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr 8:13,159,161...13,175,338
Ensembl chr 8:13,159,161...13,175,338
JBrowse link
G Lamp2 lysosomal-associated membrane protein 2 ISO
IBA
IDA
(MGI:MGI:6201960|PMID:21873635)
(MGI:MGI:3773765|PMID:18022370), (MGI:MGI:5291841|PMID:21896273)
MGI
GO_Central
BHF-UCL
RGD
PMID:18022370, PMID:21873635, PMID:21896273 GO_REF:0000008, GO_REF:0000096, MGI:MGI:2154458, MGI:MGI:3773765, MGI:MGI:4417868, MGI:MGI:5291841, MGI:MGI:6201960 NCBI chr  X:38,399,647...38,456,460
Ensembl chr  X:38,401,357...38,456,454
JBrowse link
G Lamp3 lysosomal-associated membrane protein 3 IDA
IBA
(MGI:MGI:2675198|PMID:12938238)
(MGI:MGI:6201960|PMID:21873635)
MGI
GO_Central
PMID:12938238, PMID:21873635 MGI:MGI:2675198, MGI:MGI:6201960 NCBI chr16:19,653,381...19,706,365
Ensembl chr16:19,653,378...19,706,375
JBrowse link
G Lamp5 lysosomal-associated membrane protein family, member 5 IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr 2:136,052,025...136,069,917
Ensembl chr 2:136,052,239...136,069,917
JBrowse link
G Laptm4a lysosomal-associated protein transmembrane 4A ISO
IBA
(MGI:MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000096, MGI:MGI:4834177, MGI:MGI:6201960 NCBI chr12:8,921,307...8,938,742
Ensembl chr12:8,921,664...8,938,742
JBrowse link
G Laptm4b lysosomal-associated protein transmembrane 4B ISO
IBA
(MGI:MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000096, MGI:MGI:4834177, MGI:MGI:6201960 NCBI chr15:34,238,026...34,284,295
Ensembl chr15:34,238,028...34,284,302
JBrowse link
G Laptm5 lysosomal-associated protein transmembrane 5 IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr 4:130,912,890...130,936,148
Ensembl chr 4:130,913,125...130,936,141
JBrowse link
G Litaf LPS-induced TN factor ISO (MGI:MGI:2136495|PMID:11274176) MGI PMID:11274176 MGI:MGI:2136495 NCBI chr16:10,959,273...10,993,121
Ensembl chr16:10,959,275...11,066,157
JBrowse link
G Marchf1 membrane associated ring-CH-type finger 1 IDA (MGI:MGI:4430128|PMID:19880452) UniProtKB PMID:19880452 MGI:MGI:4430128 NCBI chr 8:65,618,009...66,472,841
Ensembl chr 8:65,617,900...66,471,637
JBrowse link
G Mcoln1 mucolipin 1 ISO
IBA
(MGI:MGI:6201960|PMID:21873635) RGD
GO_Central
PMID:21873635 GO_REF:0000096, MGI:MGI:4417868, MGI:MGI:6201960 NCBI chr 8:3,500,519...3,515,232
Ensembl chr 8:3,500,457...3,515,232
JBrowse link
G Mcoln2 mucolipin 2 NOT IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr 3:146,149,796...146,195,514
Ensembl chr 3:146,149,833...146,195,513
JBrowse link
G Mcoln3 mucolipin 3 IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr 3:146,093,277...146,141,808
Ensembl chr 3:146,117,450...146,141,806
JBrowse link
G Meak7 MTOR associated protein , eak-7 homolog ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 8:119,760,063...119,778,439
Ensembl chr 8:119,760,076...119,778,416
JBrowse link
G Mios meiosis regulator for oocyte development ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 6:8,209,111...8,240,573
Ensembl chr 6:8,209,222...8,236,274
JBrowse link
G Mtor mechanistic target of rapamycin kinase ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 4:148,448,582...148,557,685
Ensembl chr 4:148,448,611...148,557,683
JBrowse link
G Myo7a myosin VIIA ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 7:98,051,054...98,119,522
Ensembl chr 7:98,051,060...98,119,524
JBrowse link
G Ncstn nicastrin ISO RGD GO_REF:0000096, MGI:MGI:4417868 NCBI chr 1:172,066,013...172,082,789
Ensembl chr 1:172,066,013...172,082,795
JBrowse link
G Neu3 neuraminidase 3 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 7:99,811,434...99,828,457
Ensembl chr 7:99,811,439...99,828,417
JBrowse link
G Nprl2 NPR2 like, GATOR1 complex subunit ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 9:107,542,177...107,545,706
Ensembl chr 9:107,542,226...107,545,706
JBrowse link
G Nprl3 nitrogen permease regulator-like 3 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr11:32,231,963...32,267,707
Ensembl chr11:32,225,628...32,267,707
JBrowse link
G Oca2 oculocutaneous albinism II ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 7:56,239,593...56,536,518
Ensembl chr 7:56,239,760...56,536,518
JBrowse link
G Ocln occludin ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr13:100,496,504...100,552,718
Ensembl chr13:100,496,507...100,552,718
JBrowse link
G Pip4p1 phosphatidylinositol-4,5-bisphosphate 4-phosphatase 1 ISO
IDA
(MGI:MGI:6304515|PMID:29644770) MGI
UniProt
PMID:29644770 GO_REF:0000096, MGI:MGI:4834177, MGI:MGI:6304515 NCBI chr14:50,927,215...50,931,010
Ensembl chr14:50,926,068...50,930,856
JBrowse link
G Pip4p2 phosphatidylinositol-4,5-bisphosphate 4-phosphatase 2 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 4:14,864,219...14,915,260
Ensembl chr 4:14,864,076...14,915,176
JBrowse link
G Pla2g4e phospholipase A2, group IVE IDA (MGI:MGI:6161105|PMID:29447909) UniProt PMID:29447909 MGI:MGI:6161105 NCBI chr 2:120,166,412...120,245,630
Ensembl chr 2:120,166,412...120,245,335
JBrowse link
G Pld3 phospholipase D family, member 3 IDA (MGI:MGI:6115966|PMID:28128235) UniProt PMID:28128235 MGI:MGI:6115966 NCBI chr 7:27,531,367...27,553,229
Ensembl chr 7:27,532,000...27,553,218
JBrowse link
G Psen1 presenilin 1 ISO
IBA
(MGI:MGI:6201960|PMID:21873635) RGD
GO_Central
PMID:21873635 GO_REF:0000096, MGI:MGI:4417868, MGI:MGI:6201960 NCBI chr12:83,688,152...83,735,095
Ensembl chr12:83,688,152...83,735,199
JBrowse link
G Psen2 presenilin 2 IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr 1:180,227,004...180,263,467
Ensembl chr 1:180,227,004...180,263,438
JBrowse link
G Rnf13 ring finger protein 13 IDA
IBA
(MGI:MGI:3844769|PMID:19292867)
(MGI:MGI:6201960|PMID:21873635)
UniProtKB
GO_Central
PMID:19292867, PMID:21873635 MGI:MGI:3844769, MGI:MGI:6201960 NCBI chr 3:57,736,044...57,835,425
Ensembl chr 3:57,736,062...57,835,233
JBrowse link
G Rnf152 ring finger protein 152 ISO
IBA
(MGI:MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000096, MGI:MGI:4834177, MGI:MGI:6201960 NCBI chr 1:105,276,917...105,356,991
Ensembl chr 1:105,276,914...105,356,710
JBrowse link
G Rnf183 ring finger protein 183 IDA (MGI:MGI:6113025|PMID:29300766) UniProt PMID:29300766 MGI:MGI:6113025 NCBI chr 4:62,427,540...62,435,250
Ensembl chr 4:62,427,540...62,435,252
JBrowse link
G Scarb2 scavenger receptor class B, member 2 IDA (MGI:MGI:3773765|PMID:18022370) BHF-UCL PMID:18022370 MGI:MGI:3773765 NCBI chr 5:92,441,311...92,505,657
Ensembl chr 5:92,441,314...92,506,833
JBrowse link
G Sec13 SEC13 homolog, nuclear pore and COPII coat complex component ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 6:113,728,052...113,740,681
Ensembl chr 6:113,728,062...113,740,743
JBrowse link
G Seh1l SEH1-like (S. cerevisiae ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr18:67,774,876...67,795,487
Ensembl chr18:67,774,876...67,795,487
JBrowse link
G Sidt2 SID1 transmembrane family, member 2 IDA
ISO
(MGI:MGI:4867132|PMID:20965152) UniProtKB
MGI
PMID:20965152 GO_REF:0000096, MGI:MGI:4834177, MGI:MGI:4867132 NCBI chr 9:45,937,857...45,958,000
Ensembl chr 9:45,937,857...45,955,258
JBrowse link
G Slc11a2 solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2 ISO
IBA
(MGI:MGI:6201960|PMID:21873635) MGI
GO_Central
RGD
PMID:21873635 GO_REF:0000096, MGI:MGI:4417868, MGI:MGI:4834177, MGI:MGI:6201960 NCBI chr15:100,387,898...100,424,209
Ensembl chr15:100,387,898...100,425,072
JBrowse link
G Slc15a3 solute carrier family 15, member 3 ISO
IDA
IBA
(MGI:MGI:5571205|PMID:24695226)
(MGI:MGI:6201960|PMID:21873635)
RGD
UniProt
GO_Central
PMID:21873635, PMID:24695226 GO_REF:0000096, MGI:MGI:4417868, MGI:MGI:5571205, MGI:MGI:6201960 NCBI chr19:10,842,544...10,857,915
Ensembl chr19:10,839,727...10,859,362
JBrowse link
G Slc15a4 solute carrier family 15, member 4 IDA (MGI:MGI:5571205|PMID:24695226) UniProt PMID:24695226 MGI:MGI:5571205 NCBI chr 5:127,594,545...127,633,292
Ensembl chr 5:127,595,664...127,632,897
JBrowse link
G Slc17a5 solute carrier family 17 (anion/sugar transporter), member 5 ISO MGI GO_REF:0000008, MGI:MGI:2154458 NCBI chr 9:78,536,487...78,588,045
Ensembl chr 9:78,536,488...78,588,041
JBrowse link
G Slc26a11 solute carrier family 26, member 11 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr11:119,355,509...119,381,076
Ensembl chr11:119,355,557...119,381,079
JBrowse link
G Slc29a3 solute carrier family 29 (nucleoside transporters), member 3 IEA UniProtKB GO_REF:0000002, MGI:MGI:2152098 NCBI chr10:60,712,072...60,752,849
Ensembl chr10:60,712,072...60,752,794
JBrowse link
G Slc2a6 solute carrier family 2 (facilitated glucose transporter), member 6 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 2:27,021,363...27,028,000
Ensembl chr 2:27,021,363...27,027,998
JBrowse link
G Slc35f6 solute carrier family 35, member F6 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 5:30,647,939...30,659,729
Ensembl chr 5:30,647,933...30,659,729
JBrowse link
G Slc38a9 solute carrier family 38, member 9 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr13:112,656,189...112,738,752
Ensembl chr13:112,660,751...112,738,749
JBrowse link
G Slc39a14 solute carrier family 39 (zinc transporter), member 14 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr14:70,303,467...70,351,452
Ensembl chr14:70,303,469...70,351,425
JBrowse link
G Slc39a8 solute carrier family 39 (metal ion transporter), member 8 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 3:135,816,882...135,888,572
Ensembl chr 3:135,825,279...135,888,572
JBrowse link
G Slc48a1 solute carrier family 48 (heme transporter), member 1 ISO
IBA
(MGI:MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000096, MGI:MGI:4834177, MGI:MGI:6201960 NCBI chr15:97,784,365...97,792,692
Ensembl chr15:97,778,520...97,792,692
JBrowse link
G Slc66a1 solute carrier family 66 member 1 ISO
IBA
(MGI:MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000096, MGI:MGI:4834177, MGI:MGI:6201960 NCBI chr 4:139,294,030...139,310,760
Ensembl chr 4:139,294,029...139,310,708
JBrowse link
G Spag9 sperm associated antigen 9 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr11:93,996,046...94,126,093
Ensembl chr11:93,996,091...94,126,085
JBrowse link
G Sppl2a signal peptide peptidase like 2A IDA
IBA
(MGI:MGI:5291841|PMID:21896273)
(MGI:MGI:6201960|PMID:21873635)
MGI
GO_Central
PMID:21873635, PMID:21896273 MGI:MGI:5291841, MGI:MGI:6201960 NCBI chr 2:126,890,391...126,933,791
Ensembl chr 2:126,890,391...126,933,235
JBrowse link
G Sppl2b signal peptide peptidase like 2B ISO
IBA
(MGI:MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000096, MGI:MGI:4834177, MGI:MGI:6201960 NCBI chr10:80,855,242...80,868,708
Ensembl chr10:80,855,275...80,868,708
JBrowse link
G Sppl2c signal peptide peptidase 2C IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr11:104,186,327...104,191,166
Ensembl chr11:104,186,327...104,191,163
JBrowse link
G Stx17 syntaxin 17 NOT ISO (PMID:10930465) UniProtKB PMID:10930465 NCBI chr 4:48,124,906...48,186,507
Ensembl chr 4:48,124,915...48,186,507
JBrowse link
G Stx7 syntaxin 7 ISO RGD GO_REF:0000096, MGI:MGI:4417868 NCBI chr10:24,149,289...24,188,961
Ensembl chr10:24,149,302...24,190,222
JBrowse link
G Stx8 syntaxin 8 ISO RGD GO_REF:0000096, MGI:MGI:4417868 NCBI chr11:67,966,411...68,207,148
Ensembl chr11:67,966,193...68,207,148
JBrowse link
G Szt2 SZT2 subunit of KICSTOR complex ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 4:118,362,740...118,409,286
Ensembl chr 4:118,362,743...118,409,273
JBrowse link
G Tecpr1 tectonin beta-propeller repeat containing 1 ISO
IBA
(MGI:MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000096, MGI:MGI:4834177, MGI:MGI:6201960 NCBI chr 5:144,194,442...144,223,615
Ensembl chr 5:144,194,442...144,223,615
JBrowse link
G Tfeb transcription factor EB ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr17:47,737,037...47,792,416
Ensembl chr17:47,737,030...47,792,419
JBrowse link
G Tm4sf5 transmembrane 4 superfamily member 5 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr11:70,505,274...70,511,183
Ensembl chr11:70,505,244...70,511,178
JBrowse link
G Tm6sf1 transmembrane 6 superfamily member 1 IDA
IBA
(MGI:MGI:5619893|PMID:25422095)
(MGI:MGI:6201960|PMID:21873635)
UniProtKB
GO_Central
PMID:21873635, PMID:25422095 MGI:MGI:5619893, MGI:MGI:6201960 NCBI chr 7:81,858,718...81,884,079
Ensembl chr 7:81,859,001...81,884,434
JBrowse link
G Tmbim1 transmembrane BAX inhibitor motif containing 1 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 1:74,288,247...74,304,336
Ensembl chr 1:74,288,247...74,305,622
JBrowse link
G Tmem106b transmembrane protein 106B ISO
IBA
(MGI:MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000096, MGI:MGI:4834177, MGI:MGI:6201960 NCBI chr 6:13,069,759...13,089,269
Ensembl chr 6:13,069,759...13,089,269
JBrowse link
G Tmem165 transmembrane protein 165 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 5:76,183,880...76,209,244
Ensembl chr 5:76,183,880...76,209,245
JBrowse link
G Tmem192 transmembrane protein 192 ISO
IBA
(MGI:MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000096, MGI:MGI:4834177, MGI:MGI:6201960 NCBI chr 8:64,947,149...64,969,036
Ensembl chr 8:64,947,185...64,969,033
JBrowse link
G Tmem63a transmembrane protein 63a ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 1:180,942,286...180,975,106
Ensembl chr 1:180,942,344...180,975,112
JBrowse link
G Tmem79 transmembrane protein 79 IDA
IBA
(MGI:MGI:5518480|PMID:24060273)
(MGI:MGI:6201960|PMID:21873635)
UniProtKB
GO_Central
PMID:21873635, PMID:24060273 MGI:MGI:5518480, MGI:MGI:6201960 NCBI chr 3:88,328,653...88,334,433
Ensembl chr 3:88,328,655...88,336,148
JBrowse link
G Tmem9 transmembrane protein 9 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 1:136,008,219...136,035,030
Ensembl chr 1:136,008,150...136,035,342
JBrowse link
G Tpcn1 two pore channel 1 ISO
IBA
(MGI:MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000096, MGI:MGI:4834177, MGI:MGI:6201960 NCBI chr 5:120,534,157...120,588,678
Ensembl chr 5:120,534,153...120,588,673
JBrowse link
G Tpcn2 two pore segment channel 2 IDA
ISO
(MGI:MGI:5285171|PMID:19557428) UniProtKB
MGI
PMID:19557428 GO_REF:0000096, MGI:MGI:4834177, MGI:MGI:5285171 NCBI chr 7:145,181,633...145,284,011
Ensembl chr 7:145,186,524...145,284,011
JBrowse link
G Treml4 triggering receptor expressed on myeloid cells-like 4 colocalizes_with IDA (MGI:MGI:5775261|PMID:25848864) UniProtKB PMID:25848864 MGI:MGI:5775261 NCBI chr17:48,264,200...48,275,607
Ensembl chr17:48,264,295...48,275,360
JBrowse link
G Trim23 tripartite motif-containing 23 ISO
IBA
(MGI:MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000096, MGI:MGI:4834177, MGI:MGI:6201960 NCBI chr13:104,178,839...104,203,475
Ensembl chr13:104,178,797...104,203,372
JBrowse link
G Trpm2 transient receptor potential cation channel, subfamily M, member 2 IDA (MGI:MGI:5298324|PMID:21753080) UniProtKB PMID:21753080 MGI:MGI:5298324 NCBI chr10:77,907,722...77,969,909
Ensembl chr10:77,907,722...77,970,563
JBrowse link
G Uba1 ubiquitin-like modifier activating enzyme 1 colocalizes_with ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr  X:20,658,302...20,683,179
Ensembl chr  X:20,658,326...20,683,179
JBrowse link
G Ubxn6 UBX domain protein 6 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr17:56,067,045...56,079,333
Ensembl chr17:56,067,045...56,075,028
JBrowse link
G Vamp7 vesicle-associated membrane protein 7 ISS
ISO
(MGI:MGI:3773774|PMID:10459012) UniProtKB
RGD
PMID:10459012 GO_REF:0000096, MGI:MGI:3773774, MGI:MGI:4417868
G Vamp8 vesicle-associated membrane protein 8 ISO MGI
RGD
GO_REF:0000096, MGI:MGI:4417868, MGI:MGI:4834177 NCBI chr 6:72,385,221...72,390,667
Ensembl chr 6:72,385,223...72,390,703
JBrowse link
G Vps13a vacuolar protein sorting 13A ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr19:16,615,366...16,781,071
Ensembl chr19:16,615,366...16,780,933
JBrowse link
G Vps39 VPS39 HOPS complex subunit ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 2:120,316,461...120,353,142
Ensembl chr 2:120,316,461...120,353,137
JBrowse link
G Vps41 VPS41 HOPS complex subunit ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr13:18,717,292...18,866,811
Ensembl chr13:18,717,286...18,866,811
JBrowse link
G Vti1b vesicle transport through interaction with t-SNAREs 1B ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr12:79,156,017...79,172,685
Ensembl chr12:79,156,017...79,172,667
JBrowse link
G Wdr24 WD repeat domain 24 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr17:25,823,627...25,828,730
Ensembl chr17:25,823,627...25,828,730
JBrowse link
G Wdr59 WD repeat domain 59 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 8:111,448,781...111,522,128
Ensembl chr 8:111,448,797...111,522,092
JBrowse link
G Wdr81 WD repeat domain 81 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr11:75,440,943...75,454,808
Ensembl chr11:75,440,944...75,454,717
JBrowse link
lysosomal proton-transporting V-type ATPase complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Spaar small regulatory polypeptide of amino acid response colocalizes_with ISO (PMID:28024296) UniProtKB PMID:28024296 NCBI chr 4:43,730,034...43,734,534
Ensembl chr 4:43,730,034...43,759,462
JBrowse link
phagolysosome membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hrg histidine-rich glycoprotein IDA (MGI:MGI:5527134|PMID:23395172) MGI PMID:23395172 MGI:MGI:5527134 NCBI chr16:22,951,072...22,961,659
Ensembl chr16:22,951,072...22,961,656
JBrowse link
G Lamp1 lysosomal-associated membrane protein 1 IDA (MGI:MGI:5527134|PMID:23395172) MGI PMID:23395172 MGI:MGI:5527134 NCBI chr 8:13,159,161...13,175,338
Ensembl chr 8:13,159,161...13,175,338
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 23195
    cellular anatomical entity 19140
      cytoplasm 11306
        vacuole 565
          vacuolar membrane 194
            lytic vacuole membrane 140
              fungal-type vacuole membrane + 0
              lysosomal membrane + 140
Path 2
Term Annotations click to browse term
  cellular_component 23195
    cellular anatomical entity 19140
      organelle 12896
        membrane-bounded organelle 11529
          intracellular membrane-bounded organelle 10790
            vacuole 565
              vacuolar membrane 194
                lytic vacuole membrane 140
                  fungal-type vacuole membrane + 0
                  lysosomal membrane + 140
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.