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ONTOLOGY REPORT - ANNOTATIONS


Term:lytic vacuole membrane
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Accession:GO:0098852 term browser browse the term
Definition:The lipid bilayer surrounding a lytic vacuole and separating its contents from the cytoplasm of the cell.


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azurophil granule membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Vamp1 vesicle-associated membrane protein 1 NOT ISO (PMID:11391393) RGD PMID:11391393 NCBI chr 4:157,726,941...157,733,644
Ensembl chr 4:157,726,941...157,733,643
JBrowse link
G Vamp7 vesicle-associated membrane protein 7 ISO (PMID:16677249) RGD PMID:16677249 NCBI chr12:18,996,566...19,033,714
Ensembl chr12:18,996,591...19,030,381
JBrowse link
G Vamp8 vesicle-associated membrane protein 8 IEA
ISO
GO_REF:0000107
(PMID:16677249)
Ensembl
RGD
PMID:16677249 GO_REF:0000107 NCBI chr 4:100,250,301...100,252,756
Ensembl chr 4:100,250,301...100,252,755
JBrowse link
chaperone-mediated autophagy translocation complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lamp2 lysosomal-associated membrane protein 2 ISO
ISS
(PMID:8662539)
GO_REF:0000024
RGD
ParkinsonsUK-UCL
PMID:8662539 GO_REF:0000024 NCBI chr  X:124,722,628...124,766,079
Ensembl chr  X:124,722,628...124,766,044
JBrowse link
cytoplasmic side of lysosomal membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Borcs5 BLOC-1 related complex subunit 5 ISO
IBA
(PMID:25898167)
PMID:21873635
RGD PMID:25898167, PMID:21873635 RGD:13792537 NCBI chr 4:168,396,034...168,466,968
Ensembl chr 4:168,396,775...168,464,352
JBrowse link
G Cdip1 cell death-inducing p53 target 1 ISO
ISS
(PMID:27582497)
GO_REF:0000024
RGD
UniProt
PMID:27582497 GO_REF:0000024 NCBI chr10:10,966,819...10,989,937
Ensembl chr10:10,967,658...10,989,936
JBrowse link
G Gfap glial fibrillary acidic protein IDA PMID:20797626 ParkinsonsUK-UCL PMID:20797626 RGD:10412296 NCBI chr10:90,990,762...90,999,435
Ensembl chr10:90,990,762...90,999,506
JBrowse link
G Litaf lipopolysaccharide-induced TNF factor ISO
ISS
(PMID:27582497)
GO_REF:0000024
RGD
UniProt
PMID:27582497 GO_REF:0000024 NCBI chr10:4,753,546...4,763,272
Ensembl chr10:4,719,713...4,763,510
JBrowse link
endolysosome membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clec16a C-type lectin domain containing 16A ISO
IBA
(MGI:MGI:5603233|PMID:24949970)
PMID:21873635
RGD PMID:24949970, PMID:21873635 MGI:MGI:5603233, RGD:13792537 NCBI chr10:5,002,196...5,196,914
Ensembl chr10:5,009,826...5,196,892
JBrowse link
G Slc15a4 solute carrier family 15 member 4 ISO
IEA
ISS
(PMID:32433612)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:32433612 GO_REF:0000024, GO_REF:0000107 NCBI chr12:32,753,824...32,773,277
Ensembl chr12:32,753,824...32,773,277
JBrowse link
G Tasl TLR adaptor interacting with endolysosomal SLC15A4 ISO
IEA
(PMID:32433612)
GO_REF:0000107
RGD
Ensembl
PMID:32433612 GO_REF:0000107 NCBI chr  X:54,390,733...54,409,466
Ensembl chr  X:54,390,733...54,409,466
JBrowse link
extrinsic component of lysosome membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rab7a RAB7A, member RAS oncogene family ISO
ISS
(MGI:MGI:5689086|PMID:23708524)
GO_REF:0000024
RGD
GO_Central
PMID:23708524 GO_REF:0000024, MGI:MGI:5689086 NCBI chr 4:119,910,461...119,963,065
Ensembl chr 4:119,910,478...119,959,173
JBrowse link
integral component of lysosomal membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp13a2 ATPase cation transporting 13A2 ISO (PMID:26134396) RGD PMID:26134396 NCBI chr 5:159,512,208...159,531,631
Ensembl chr 5:159,512,285...159,531,637
JBrowse link
G Npc1 NPC intracellular cholesterol transporter 1 ISO (PMID:28784760), (PMID:9927649) RGD PMID:9927649, PMID:28784760 NCBI chr18:3,616,878...3,662,656
Ensembl chr18:3,616,878...3,662,683
JBrowse link
G Slc15a4 solute carrier family 15 member 4 ISO
IEA
ISS
(PMID:25238095), (PMID:29224352)
(MGI:MGI:6112943|PMID:29155995), (MGI:MGI:6278628|PMID:21277849)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:21277849, PMID:25238095, PMID:29155995, PMID:29224352 GO_REF:0000024, GO_REF:0000107, MGI:MGI:6112943, MGI:MGI:6278628 NCBI chr12:32,753,824...32,773,277
Ensembl chr12:32,753,824...32,773,277
JBrowse link
G Slc38a9 solute carrier family 38, member 9 ISO (PMID:29053970) RGD PMID:29053970 NCBI chr 2:44,512,556...44,592,793
Ensembl chr 2:44,512,895...44,592,053
JBrowse link
G Slc46a3 solute carrier family 46, member 3 ISO (PMID:26631267) RGD PMID:26631267 NCBI chr12:8,725,479...8,741,944
Ensembl chr12:8,725,517...8,741,951
JBrowse link
lysosomal membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07008608.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 2:66,600,151...66,608,324 JBrowse link
G AABR07019209.2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr15:93,634,820...93,639,250 JBrowse link
G AABR07026294.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr16:70,905,993...70,909,439 JBrowse link
G AABR07029605.1 IEA GO_REF:0000107 Ensembl GO_REF:0000107 Ensembl chr10:39,850,818...39,870,188 JBrowse link
G AABR07041481.1 IEA GO_REF:0000044 UniProt GO_REF:0000044 Ensembl chr  X:131,381,134...131,382,011 JBrowse link
G Abca2 ATP binding cassette subfamily A member 2 ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 3:2,648,787...2,668,770
Ensembl chr 3:2,648,885...2,668,809
JBrowse link
G Abca5 ATP binding cassette subfamily A member 5 IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr10:98,573,226...98,645,028
Ensembl chr10:98,576,039...98,644,938
JBrowse link
G Abcb9 ATP binding cassette subfamily B member 9 IEA
ISO
GO_REF:0000107
(PMID:10748049), (PMID:17977821), (PMID:18952056)
Ensembl
RGD
PMID:10748049, PMID:17977821, PMID:18952056 GO_REF:0000107 NCBI chr12:37,923,974...37,956,678
Ensembl chr12:37,923,528...37,958,363
JBrowse link
G Abcd1 ATP binding cassette subfamily D member 1 ISO (PMID:16946495) RGD PMID:16946495 NCBI chr  X:157,073,860...157,095,652
Ensembl chr  X:157,072,736...157,095,274
JBrowse link
G Abcd4 ATP binding cassette subfamily D member 4 ISO (PMID:27456980) RGD PMID:27456980 NCBI chr 6:108,315,026...108,329,550
Ensembl chr 6:108,315,035...108,329,464
JBrowse link
G Abhd6 abhydrolase domain containing 6, acylglycerol lipase ISS
ISO
GO_REF:0000024
(MGI:MGI:5700445|PMID:26491015)
UniProt
RGD
PMID:26491015 GO_REF:0000024, MGI:MGI:5700445 NCBI chr15:18,647,903...18,695,133
Ensembl chr15:18,647,844...18,695,133
JBrowse link
G AC129395.1 IEA GO_REF:0000044 UniProt GO_REF:0000044 Ensembl chr10:7,026,301...7,029,136 JBrowse link
G Acp2 acid phosphatase 2, lysosomal IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 3:80,020,346...80,030,365
Ensembl chr 3:80,021,440...80,030,363
JBrowse link
G Acp3 acid phosphatase 3 IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 8:112,838,574...112,884,062
Ensembl chr 8:112,834,707...112,884,077
JBrowse link
G Anxa2 annexin A2 ISO (PMID:23360953) RGD PMID:23360953 NCBI chr 8:75,687,134...75,723,589
Ensembl chr 8:75,687,100...75,723,594
JBrowse link
G Anxa6 annexin A6 IEA
ISO
GO_REF:0000107
(PMID:23360953)
Ensembl
RGD
PMID:23360953 GO_REF:0000107 NCBI chr10:40,320,581...40,375,605
Ensembl chr10:40,320,581...40,375,605
JBrowse link
G Ap5m1 adaptor related protein complex 5 subunit mu 1 IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr15:25,933,483...25,955,745
Ensembl chr15:25,933,483...25,955,745
JBrowse link
G Arl8a ADP-ribosylation factor like GTPase 8A IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:51,972,974...51,981,976
Ensembl chr13:51,972,974...51,981,976
JBrowse link
G Arl8b ADP-ribosylation factor like GTPase 8B colocalizes_with ISO
IBA
ISS
(PMID:25898167)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:25898167, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 4:140,837,745...140,881,866
Ensembl chr 4:140,837,745...140,881,865
JBrowse link
G Atp13a2 ATPase cation transporting 13A2 ISO (PMID:23499937) RGD PMID:23499937 NCBI chr 5:159,512,208...159,531,631
Ensembl chr 5:159,512,285...159,531,637
JBrowse link
G Atp6ap2 ATPase H+ transporting accessory protein 2 IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr  X:11,137,889...11,164,854
Ensembl chr  X:11,136,939...11,164,915
JBrowse link
G Atp6v0d1 ATPase H+ transporting V0 subunit D1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:37,481,782...37,525,762
Ensembl chr19:37,481,782...37,525,762
JBrowse link
G Atp6v0d2 ATPase H+ transporting V0 subunit D2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:33,843,591...33,892,446
Ensembl chr 5:33,843,519...33,892,462
JBrowse link
G Atp6v1g1 ATPase H+ transporting V1 subunit G1 ISO (MGI:MGI:2387737|PMID:12133826) RGD PMID:12133826 MGI:MGI:2387737 NCBI chr 5:79,367,663...79,373,843
Ensembl chr 5:79,367,663...79,373,843
JBrowse link
G Atraid all-trans retinoic acid-induced differentiation factor ISO (MGI:MGI:5641105|PMID:25839652) RGD PMID:25839652 MGI:MGI:5641105 NCBI chr 6:26,680,628...26,685,185
Ensembl chr 6:26,680,598...26,685,235
JBrowse link
G Bloc1s1 biogenesis of lysosomal organelles complex-1, subunit 1 IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 7:3,342,630...3,346,238
Ensembl chr 7:3,342,630...3,346,238
JBrowse link
G Bloc1s2 biogenesis of lysosomal organelles complex-1, subunit 2 IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 1:263,913,901...263,920,989
Ensembl chr 1:263,913,854...263,920,962
JBrowse link
G Borcs6 BLOC-1 related complex subunit 6 IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr10:55,642,070...55,643,924
Ensembl chr10:55,642,070...55,643,923
JBrowse link
G Borcs8 BLOC-1 related complex subunit 8 IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr16:21,022,500...21,029,163
Ensembl chr16:21,023,996...21,029,134
JBrowse link
G Bri3 brain protein I3 IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr12:12,322,247...12,330,929
Ensembl chr12:12,322,243...12,330,939
JBrowse link
G Ccz1b CCZ1 homolog B, vacuolar protein trafficking and biogenesis associated IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr12:12,638,849...12,662,371
Ensembl chr12:12,638,864...12,662,371
JBrowse link
G Cd164 CD164 molecule IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr20:46,250,418...46,261,994
Ensembl chr20:46,250,363...46,261,994
JBrowse link
G Cd1d1 CD1d1 molecule IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 2:186,330,298...186,333,805
Ensembl chr 2:186,330,298...186,333,805
JBrowse link
G Cd63 Cd63 molecule ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000044
(PMID:22431521), (PMID:23632027)
UniProt
RGD
PMID:22431521, PMID:23632027 GO_REF:0000024, GO_REF:0000044 NCBI chr 7:3,320,250...3,335,583
Ensembl chr 7:3,320,103...3,335,582
JBrowse link
G Cd68 Cd68 molecule IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:56,268,726...56,270,605
Ensembl chr10:56,268,720...56,270,640
JBrowse link
G Clcn3 chloride voltage-gated channel 3 ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000044
(MGI:MGI:6414690|PMID:28972156), (MGI:MGI:6414716|PMID:26342074)
UniProt
RGD
PMID:26342074, PMID:28972156 GO_REF:0000024, GO_REF:0000044, MGI:MGI:6414690, MGI:MGI:6414716 NCBI chr16:32,448,821...32,520,649
Ensembl chr16:32,449,116...32,519,148
JBrowse link
G Clcn4 chloride voltage-gated channel 4 ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:28972156)
UniProt
Ensembl
RGD
PMID:28972156 GO_REF:0000024, GO_REF:0000107 NCBI chr  X:25,016,177...25,082,563
Ensembl chr  X:25,016,401...25,080,410
JBrowse link
G Clcn7 chloride voltage-gated channel 7 IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr10:14,492,844...14,518,167
Ensembl chr10:14,492,844...14,516,894
JBrowse link
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin ISS
ISO
GO_REF:0000024
(PMID:10332042), (PMID:15598649), (PMID:23840424), (PMID:9384607)
UniProt
RGD
PMID:9384607, PMID:10332042, PMID:15598649, PMID:23840424 GO_REF:0000024 NCBI chr 1:197,986,384...197,999,726
Ensembl chr 1:197,986,385...197,997,664
JBrowse link
G Cln5 CLN5, intracellular trafficking protein ISO (PMID:12134079) RGD PMID:12134079 NCBI chr15:93,634,815...93,644,146 JBrowse link
G Ctns cystinosin, lysosomal cystine transporter ISO
IBA
(PMID:11150305)
PMID:21873635
RGD PMID:11150305, PMID:21873635 RGD:13792537 NCBI chr10:59,749,250...59,772,475
Ensembl chr10:59,749,256...59,764,868
JBrowse link
G Ctsa cathepsin A IDA PMID:12505983 ParkinsonsUK-UCL PMID:12505983 RGD:10412300 NCBI chr 3:161,298,750...161,304,627
Ensembl chr 3:161,298,962...161,304,625
JBrowse link
G Ctsd cathepsin D ISO (PMID:17188016) RGD PMID:17188016 NCBI chr 1:215,541,570...215,553,446
Ensembl chr 1:215,541,542...215,553,451
JBrowse link
G Cubn cubilin IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr17:80,584,921...80,807,181
Ensembl chr17:80,584,878...80,807,243
JBrowse link
G Cyb561 cytochrome b-561 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:94,136,993...94,147,567
Ensembl chr10:94,136,993...94,147,621
JBrowse link
G Cyb561a3 cytochrome b561 family, member A3 ISO
IBA
ISS
(MGI:MGI:3695337|PMID:16996694)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:16996694, PMID:21873635 GO_REF:0000024, MGI:MGI:3695337, RGD:13792537 NCBI chr 1:226,620,933...226,642,246
Ensembl chr 1:226,634,009...226,642,243
JBrowse link
G Cybrd1 cytochrome b reductase 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:57,718,496...57,745,749
Ensembl chr 3:57,718,364...57,746,097
JBrowse link
G Depdc5 DEP domain containing 5, GATOR1 subcomplex subunit ISO
IBA
(PMID:28199306)
PMID:21873635
RGD PMID:28199306, PMID:21873635 RGD:13792537 NCBI chr14:83,089,000...83,219,576
Ensembl chr14:83,089,000...83,219,464
JBrowse link
G Dram2 DNA-damage regulated autophagy modulator 2 IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 2:209,160,901...209,189,641
Ensembl chr 2:209,161,047...209,188,622
JBrowse link
G Ffar4 free fatty acid receptor 4 ISO (PMID:22282525) RGD PMID:22282525 NCBI chr 1:256,786,124...256,804,156
Ensembl chr 1:256,786,124...256,804,156
JBrowse link
G Flcn folliculin ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000044
(PMID:24081491), (PMID:24095279), (PMID:27113757), (PMID:29848618), (PMID:31672913)
UniProt
RGD
PMID:24081491, PMID:24095279, PMID:27113757, PMID:29848618, PMID:31672913 GO_REF:0000024, GO_REF:0000044 NCBI chr10:46,153,185...46,172,331
Ensembl chr10:46,153,188...46,172,309
JBrowse link
G Fnip1 folliculin interacting protein 1 ISO (PMID:24081491), (PMID:29848618) RGD PMID:24081491, PMID:29848618 NCBI chr10:39,786,687...39,870,188 JBrowse link
G Fnip2 folliculin interacting protein 2 IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 2:178,223,561...178,334,925
Ensembl chr 2:178,225,915...178,334,900
JBrowse link
G Gaa glucosidase, alpha, acid IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr10:108,395,873...108,412,999
Ensembl chr10:108,395,860...108,413,059
JBrowse link
G Gba glucosylceramidase beta ISO (MGI:MGI:3773765|PMID:18022370)
(PMID:17187079)
RGD PMID:17187079, PMID:18022370 MGI:MGI:3773765 NCBI chr 2:188,511,781...188,522,602
Ensembl chr 2:188,516,582...188,522,601
JBrowse link
G Gimap5 GTPase, IMAP family member 5 IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 4:78,377,228...78,386,683
Ensembl chr 4:78,378,144...78,385,577
JBrowse link
G Glmp glycosylated lysosomal membrane protein IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 2:187,697,528...187,701,118
Ensembl chr 2:187,697,523...187,701,118
JBrowse link
G Gpr137 G protein-coupled receptor 137 ISO
IBA
(PMID:31036939)
PMID:21873635
RGD PMID:31036939, PMID:21873635 RGD:13792537 NCBI chr 1:222,194,266...222,197,252
Ensembl chr 1:222,194,266...222,197,252
JBrowse link
G Gpr137b G protein-coupled receptor 137B ISO
IBA
(PMID:31036939)
PMID:21873635
(MGI:MGI:6362357|PMID:31173907)
RGD PMID:31036939, PMID:31173907, PMID:21873635 MGI:MGI:6362357, RGD:13792537 NCBI chr17:90,670,852...90,709,003
Ensembl chr17:90,670,872...90,746,804
JBrowse link
G Gpr137c G protein-coupled receptor 137C ISO
IBA
(PMID:31036939)
PMID:21873635
RGD PMID:31036939, PMID:21873635 RGD:13792537 NCBI chr15:19,547,783...19,615,717
Ensembl chr15:19,547,871...19,614,805
JBrowse link
G Gpr143 G protein-coupled receptor 143 ISO (PMID:16621890) RGD PMID:16621890 NCBI chr  X:23,668,363...23,693,162
Ensembl chr  X:23,668,363...23,693,162
JBrowse link
G Grn granulin precursor ISS
ISO
IEA
GO_REF:0000024
(PMID:21092856)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:21092856 GO_REF:0000024, GO_REF:0000107 NCBI chr10:90,377,103...90,383,207
Ensembl chr10:90,376,933...90,383,205
JBrowse link
G Hgsnat heparan-alpha-glucosaminide N-acetyltransferase ISO (PMID:19823584), (PMID:20650889) RGD PMID:19823584, PMID:20650889 NCBI chr16:70,876,557...70,909,443 JBrowse link
G Hps4 HPS4, biogenesis of lysosomal organelles complex 3 subunit 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:50,285,239...50,315,893
Ensembl chr12:50,285,278...50,314,406
JBrowse link
G Hps6 HPS6, biogenesis of lysosomal organelles complex 2 subunit 3 ISO
IBA
ISS
(PMID:25189619)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:25189619, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 1:265,761,818...265,764,427
Ensembl chr 1:265,761,738...265,764,437
JBrowse link
G Hpse heparanase IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr14:10,534,358...10,576,686
Ensembl chr14:10,534,423...10,575,224
JBrowse link
G Hsp90aa1 heat shock protein 90 alpha family class A member 1 NAS PMID:18644871 ParkinsonsUK-UCL PMID:18644871 RGD:10412301 NCBI chr 6:135,107,262...135,112,793
Ensembl chr 6:135,107,271...135,112,775
JBrowse link
G Hsp90ab1 heat shock protein 90 alpha family class B member 1 IDA PMID:18644871 ParkinsonsUK-UCL PMID:18644871 RGD:10412301 NCBI chr 9:17,817,791...17,823,163
Ensembl chr 9:17,817,721...17,823,243
JBrowse link
G Hspa8 heat shock protein family A (Hsp70) member 8 IDA PMID:18644871 RGD
ParkinsonsUK-UCL
PMID:9038169, PMID:18644871 RGD:10059368, RGD:10412301 NCBI chr 8:44,989,401...44,993,261
Ensembl chr 8:44,990,014...44,993,179
JBrowse link
G Ifitm3 interferon induced transmembrane protein 3 IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 1:213,810,712...213,811,821
Ensembl chr 1:213,810,696...213,811,901
JBrowse link
G Itfg2 integrin alpha FG-GAP repeat containing 2 ISO (PMID:28199306) RGD PMID:28199306 NCBI chr 4:161,730,643...161,744,281
Ensembl chr 4:161,730,641...161,743,896
JBrowse link
G Itm2c integral membrane protein 2C IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 9:92,916,469...92,930,306
Ensembl chr 9:92,916,469...92,930,279
JBrowse link
G Kxd1 KxDL motif containing 1 IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr16:20,652,863...20,666,581
Ensembl chr16:20,657,099...20,666,579
JBrowse link
G Lamp1 lysosomal-associated membrane protein 1 ISS
IEA
IBA
GO_REF:0000024
GO_REF:0000044
PMID:21873635
UniProt PMID:21873635 GO_REF:0000024, GO_REF:0000044, RGD:13792537 NCBI chr16:81,689,576...81,714,341
Ensembl chr16:81,689,335...81,714,419
JBrowse link
G Lamp2 lysosomal-associated membrane protein 2 IDA
IBA
ISO
PMID:11082038
PMID:21873635
(MGI:MGI:3773765|PMID:18022370), (MGI:MGI:5291841|PMID:21896273)
(PMID:15297306), (PMID:21896273)
PMID:8662539
PMID:18644871
RGD PMID:15297306, PMID:18022370, PMID:21896273, PMID:11082038, PMID:21873635, PMID:8662539, PMID:18644871 MGI:MGI:3773765, MGI:MGI:5291841, RGD:1581607, RGD:13792537, RGD:10412302, RGD:10412301 NCBI chr  X:124,722,628...124,766,079
Ensembl chr  X:124,722,628...124,766,044
JBrowse link
G Lamp3 lysosomal-associated membrane protein 3 ISO
IBA
(MGI:MGI:2675198|PMID:12938238)
PMID:21873635
RGD PMID:12938238, PMID:21873635 MGI:MGI:2675198, RGD:13792537 NCBI chr11:84,930,965...85,000,694
Ensembl chr11:84,972,132...85,000,681
JBrowse link
G Lamp5 lysosomal-associated membrane protein family, member 5 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:129,012,677...129,031,522
Ensembl chr 3:129,018,592...129,031,521
JBrowse link
G Lamtor1 late endosomal/lysosomal adaptor, MAPK and MTOR activator 1 IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 1:166,991,474...166,997,045
Ensembl chr 1:166,991,474...166,997,045
JBrowse link
G Lamtor2 late endosomal/lysosomal adaptor, MAPK and MTOR activator 2 IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 2:187,911,530...187,914,930
Ensembl chr 2:187,911,533...187,915,596
JBrowse link
G Laptm4a lysosomal protein transmembrane 4 alpha ISO
IBA
ISS
(PMID:22096579)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:22096579, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 6:34,042,132...34,059,960
Ensembl chr 6:34,028,936...34,059,961
JBrowse link
G Laptm4b lysosomal protein transmembrane 4 beta ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(PMID:21224396), (PMID:22096579)
UniProt
RGD
PMID:21224396, PMID:22096579, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 7:72,924,911...72,968,099
Ensembl chr 7:72,924,799...72,968,101
JBrowse link
G Laptm5 lysosomal protein transmembrane 5 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:149,015,793...149,069,719
Ensembl chr 5:149,047,681...149,069,719
JBrowse link
G Litaf lipopolysaccharide-induced TNF factor ISO (PMID:11274176) RGD PMID:11274176 NCBI chr10:4,753,546...4,763,272
Ensembl chr10:4,719,713...4,763,510
JBrowse link
G Lmbrd1 LMBR1 domain containing 1 IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 9:30,939,555...31,038,381
Ensembl chr 9:30,939,555...31,038,379
JBrowse link
G LOC100361543 RhoA activator C11orf59-like IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr  X:37,261,428...37,262,470
Ensembl chr 1:166,991,474...166,997,045
JBrowse link
G LOC100909548 cation-dependent mannose-6-phosphate receptor-like IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr  X:88,312,689...88,321,836
Ensembl chr  X:88,312,675...88,321,834
JBrowse link
G LOC100909593 class II histocompatibility antigen, M alpha chain-like ISO (MGI:MGI:3033762|PMID:7985028) RGD PMID:7985028 MGI:MGI:3033762 NCBI chr20:3,935,501...3,938,915 JBrowse link
G LOC103692716 heat shock protein HSP 90-alpha NAS PMID:18644871 ParkinsonsUK-UCL PMID:18644871 RGD:10412301 NCBI chr 6:135,044,833...135,050,417
Ensembl chr 6:135,045,363...135,049,728
JBrowse link
G M6pr mannose-6-phosphate receptor, cation dependent IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 4:155,084,755...155,093,896
Ensembl chr 4:155,088,317...155,092,827
JBrowse link
G Marchf1 membrane associated ring-CH-type finger 1 ISO (MGI:MGI:4430128|PMID:19880452) RGD PMID:19880452 MGI:MGI:4430128 NCBI chr16:24,998,709...25,856,327
Ensembl chr16:25,001,666...25,192,675
JBrowse link
G Marchf2 membrane associated ring-CH-type finger 2 IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 7:18,559,301...18,585,351
Ensembl chr 7:18,559,205...18,585,313
JBrowse link
G Mcoln1 mucolipin 1 IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:17613490, PMID:21873635 RGD:7205504, RGD:13792537 NCBI chr12:2,054,629...2,068,682
Ensembl chr12:2,054,680...2,068,682
JBrowse link
G Mcoln2 mucolipin 2 NOT IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:252,018,594...252,068,209
Ensembl chr 2:252,018,597...252,068,271
JBrowse link
G Mcoln3 mucolipin 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:251,930,532...252,007,722
Ensembl chr 2:251,983,339...252,007,560
JBrowse link
G Meak7 MTOR associated protein, eak-7 homolog ISO (PMID:29750193) RGD PMID:29750193 NCBI chr19:52,408,700...52,430,198
Ensembl chr19:52,408,917...52,424,318
JBrowse link
G Mios meiosis regulator for oocyte development ISO (PMID:28199306) RGD PMID:28199306 NCBI chr 4:34,238,370...34,264,015
Ensembl chr 4:34,237,762...34,264,015
JBrowse link
G Mmd monocyte to macrophage differentiation-associated IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr10:77,687,964...77,783,737
Ensembl chr10:77,755,216...77,783,779
JBrowse link
G Mtor mechanistic target of rapamycin kinase ISO
ISS
(PMID:30956113)
GO_REF:0000024
RGD
UniProt
PMID:30956113 GO_REF:0000024 NCBI chr 5:165,263,813...165,373,967
Ensembl chr 5:165,263,800...165,373,967
JBrowse link
G Myo7a myosin VIIA ISO
ISS
(PMID:16001398)
GO_REF:0000024
RGD
UniProt
PMID:16001398 GO_REF:0000024 NCBI chr 1:163,001,313...163,071,545
Ensembl chr 1:163,001,875...163,071,508
JBrowse link
G Ncstn nicastrin IDA RGD PMID:12736250 RGD:724403 NCBI chr13:90,451,046...90,467,256
Ensembl chr13:90,451,044...90,467,256
JBrowse link
G Neu1 neuraminidase 1 IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr20:4,610,995...4,615,258
Ensembl chr20:4,610,995...4,615,247
JBrowse link
G Neu3 neuraminidase 3 ISO
IEA
(PMID:26251452)
GO_REF:0000044
RGD
UniProt
PMID:26251452 GO_REF:0000044 NCBI chr 1:164,803,574...164,814,777
Ensembl chr 1:164,803,574...164,814,651
JBrowse link
G Nprl2 NPR2-like, GATOR1 complex subunit ISO (PMID:28199306) RGD PMID:28199306 NCBI chr 8:116,297,950...116,301,123
Ensembl chr 8:116,297,950...116,301,122
JBrowse link
G Nprl3 NPR3-like, GATOR1 complex subunit ISO (PMID:28199306) RGD PMID:28199306 NCBI chr10:15,620,824...15,661,332
Ensembl chr10:15,620,871...15,661,331
JBrowse link
G Oca2 OCA2 melanosomal transmembrane protein ISO (PMID:19116314) RGD PMID:19116314 NCBI chr 1:114,661,970...114,987,433
Ensembl chr 1:114,679,537...114,987,433
JBrowse link
G Ocln occludin ISO (PMID:28718701) RGD PMID:28718701 NCBI chr 2:30,527,327...30,577,218
Ensembl chr 2:30,527,715...30,577,218
JBrowse link
G Pip4p1 phosphatidylinositol-4,5-bisphosphate 4-phosphatase 1 ISO
ISS
(PMID:16365287), (PMID:29146937)
(MGI:MGI:6304515|PMID:29644770)
GO_REF:0000024
RGD
UniProt
PMID:16365287, PMID:29146937, PMID:29644770 GO_REF:0000024, MGI:MGI:6304515 NCBI chr15:27,852,152...27,855,999
Ensembl chr15:27,852,154...27,855,999
JBrowse link
G Pip4p2 phosphatidylinositol-4,5-bisphosphate 4-phosphatase 2 ISO (PMID:16365287) RGD PMID:16365287 NCBI chr 5:28,395,517...28,442,924
Ensembl chr 5:28,395,296...28,442,924
JBrowse link
G Pla2g4e phospholipase A2, group IVE ISO (MGI:MGI:6161105|PMID:29447909) RGD PMID:29447909 MGI:MGI:6161105 NCBI chr 3:111,952,396...112,018,470
Ensembl chr 3:111,952,348...111,994,337
JBrowse link
G Pld3 phospholipase D family, member 3 ISO (MGI:MGI:6115966|PMID:28128235) RGD PMID:28128235 MGI:MGI:6115966 NCBI chr 1:84,339,269...84,361,686
Ensembl chr 1:84,339,261...84,353,725
JBrowse link
G Plekhm1 pleckstrin homology and RUN domain containing M1 IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr10:91,451,890...91,500,675
Ensembl chr10:91,451,865...91,500,661
JBrowse link
G Psen1 presenilin 1 IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:12736250, PMID:21873635 RGD:724403, RGD:13792537 NCBI chr 6:107,169,514...107,221,000
Ensembl chr 6:107,169,528...107,216,798
JBrowse link
G Psen2 presenilin 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:98,513,600...98,539,347
Ensembl chr13:98,513,570...98,530,724
JBrowse link
G Rab12 RAB12, member RAS oncogene family IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 9:114,683,985...114,709,613
Ensembl chr 9:114,684,039...114,709,546
JBrowse link
G Rnf13 ring finger protein 13 ISO
IBA
ISS
(MGI:MGI:3844769|PMID:19292867)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:19292867, PMID:21873635 GO_REF:0000024, MGI:MGI:3844769, RGD:13792537 NCBI chr 2:147,853,423...147,948,277
Ensembl chr 2:147,853,423...148,039,132
JBrowse link
G Rnf152 ring finger protein 152 ISO
IBA
ISS
(PMID:25936802)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:25936802, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr13:25,183,295...25,262,785
Ensembl chr13:25,186,106...25,262,469
JBrowse link
G Rnf183 ring finger protein 183 ISO (MGI:MGI:6113025|PMID:29300766) RGD PMID:29300766 MGI:MGI:6113025 NCBI chr 5:78,283,722...78,292,729
Ensembl chr 5:78,284,879...78,285,451
JBrowse link
G RT1-CE5 RT1 class I, locus CE5 ISO (PMID:23851683) RGD PMID:23851683 NCBI chr20:4,892,702...4,896,993
Ensembl chr20:4,892,702...4,896,991
JBrowse link
G RT1-Da RT1 class II, locus Da ISO (PMID:18305173) RGD PMID:18305173 NCBI chr20:4,127,644...4,132,616
Ensembl chr20:4,127,644...4,132,616
JBrowse link
G RT1-Db1 RT1 class II, locus Db1 ISO (PMID:18305173) RGD PMID:18305173 NCBI chr20:4,087,621...4,097,190
Ensembl chr20:4,087,618...4,097,190
JBrowse link
G RT1-DMa RT1 class II, locus DMa ISO (MGI:MGI:3033762|PMID:7985028) RGD PMID:7985028 MGI:MGI:3033762 NCBI chr20:3,935,512...3,938,915
Ensembl chr20:5,240,975...5,244,386
JBrowse link
G RT1-DMb RT1 class II, locus DMb ISO (MGI:MGI:3033877|PMID:7584146) RGD PMID:7584146 MGI:MGI:3033877 NCBI chr20:3,945,383...3,952,838
Ensembl chr20:5,227,045...5,234,290
JBrowse link
G Scarb2 scavenger receptor class B, member 2 TAS
ISS
ISO
GO_REF:0000024
(MGI:MGI:3773765|PMID:18022370)
UniProt
RGD
PMID:18022370, PMID:1715871 GO_REF:0000024, MGI:MGI:3773765, RGD:632394 NCBI chr14:17,064,173...17,115,620
Ensembl chr14:17,064,353...17,115,963
JBrowse link
G Sec13 SEC13 homolog, nuclear pore and COPII coat complex component ISO
ISS
(PMID:28199306)
GO_REF:0000024
RGD
UniProt
PMID:28199306 GO_REF:0000024 NCBI chr 4:145,686,186...145,699,577
Ensembl chr 4:145,686,193...145,699,577
JBrowse link
G Seh1l SEH1-like nucleoporin ISO (PMID:28199306) RGD PMID:28199306 NCBI chr18:63,545,150...63,568,101 JBrowse link
G Sidt2 SID1 transmembrane family, member 2 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(MGI:MGI:4867132|PMID:20965152)
(PMID:17897319)
Ensembl
UniProt
RGD
PMID:17897319, PMID:20965152 GO_REF:0000024, GO_REF:0000107, MGI:MGI:4867132 NCBI chr 8:50,230,335...50,246,979
Ensembl chr 8:50,230,339...50,246,656
JBrowse link
G Slc11a2 solute carrier family 11 member 2 IDA
IBA
IEA
ISO
PMID:21873635
GO_REF:0000107
(PMID:10751401)
Ensembl
RGD
PMID:10751401, PMID:16449358, PMID:21873635 GO_REF:0000107, RGD:1580424, RGD:13792537 NCBI chr 7:142,025,812...142,062,892
Ensembl chr 7:142,025,815...142,063,212
JBrowse link
G Slc15a3 solute carrier family 15 member 3 IDA
ISO
IBA
(MGI:MGI:5571205|PMID:24695226)
PMID:21873635
RGD PMID:24695226, PMID:11336635, PMID:21873635 MGI:MGI:5571205, RGD:633591, RGD:13792537 NCBI chr 1:226,896,387...226,912,644
Ensembl chr 1:226,897,625...226,912,708
JBrowse link
G Slc15a4 solute carrier family 15 member 4 ISO (MGI:MGI:5571205|PMID:24695226) RGD PMID:24695226 MGI:MGI:5571205 NCBI chr12:32,753,824...32,773,277
Ensembl chr12:32,753,824...32,773,277
JBrowse link
G Slc17a5 solute carrier family 17 member 5 ISO (PMID:3961501) RGD PMID:3961501 NCBI chr 8:85,891,245...85,926,466
Ensembl chr 8:85,891,257...85,926,450
JBrowse link
G Slc26a11 solute carrier family 26 member 11 ISO (PMID:20957757) RGD PMID:20957757 NCBI chr10:108,479,105...108,504,188
Ensembl chr10:108,480,368...108,503,706
JBrowse link
G Slc29a3 solute carrier family 29 member 3 IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr20:30,289,527...30,327,343
Ensembl chr20:30,287,424...30,327,361
JBrowse link
G Slc2a6 solute carrier family 2 member 6 ISO (PMID:30431159) RGD PMID:30431159 NCBI chr 3:5,567,729...5,575,144
Ensembl chr 3:5,568,321...5,575,136
JBrowse link
G Slc30a3 solute carrier family 30 member 3 IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 6:26,629,752...26,650,106
Ensembl chr 6:26,642,783...26,650,105
JBrowse link
G Slc30a4 solute carrier family 30 member 4 IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 3:114,805,919...114,828,154
Ensembl chr 3:114,805,922...114,828,154
JBrowse link
G Slc35f6 solute carrier family 35, member F6 ISO
ISS
(PMID:20957757)
GO_REF:0000024
RGD
UniProt
PMID:20957757 GO_REF:0000024 NCBI chr 6:27,095,144...27,106,982
Ensembl chr 6:27,095,141...27,107,030
JBrowse link
G Slc36a1 solute carrier family 36 member 1 IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr10:40,538,013...40,573,304
Ensembl chr10:40,543,288...40,574,444
JBrowse link
G Slc38a9 solute carrier family 38, member 9 ISO
ISS
(PMID:30956113)
GO_REF:0000024
RGD
UniProt
PMID:30956113 GO_REF:0000024 NCBI chr 2:44,512,556...44,592,793
Ensembl chr 2:44,512,895...44,592,053
JBrowse link
G Slc39a14 solute carrier family 39 member 14 ISO (PMID:20682781) RGD PMID:20682781 NCBI chr15:51,982,872...52,029,841
Ensembl chr15:51,982,982...52,029,816
JBrowse link
G Slc39a8 solute carrier family 39 member 8 ISO
ISS
(PMID:18390834), (PMID:19401385)
GO_REF:0000024
RGD
UniProt
PMID:18390834, PMID:19401385 GO_REF:0000024 NCBI chr 2:241,028,851...241,092,584
Ensembl chr 2:241,029,693...241,092,582
JBrowse link
G Slc3a2 solute carrier family 3 member 2 IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 1:224,906,566...224,921,029
Ensembl chr 1:224,906,554...224,921,092
JBrowse link
G Slc48a1 solute carrier family 48 member 1 ISO
IBA
(PMID:18418376)
PMID:21873635
RGD PMID:18418376, PMID:21873635 RGD:13792537 NCBI chr 7:139,271,698...139,279,499
Ensembl chr 7:139,271,698...139,279,499
JBrowse link
G Slc49a4 solute carrier family 49 member 4 IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr11:68,198,709...68,272,766
Ensembl chr11:68,198,709...68,272,758
JBrowse link
G Slc66a1 solute carrier family 66 member 1 IDA
IBA
ISO
PMID:23169667
PMID:21873635
(PMID:22822152)
RGD PMID:22822152, PMID:23169667, PMID:21873635 RGD:8553575, RGD:13792537 NCBI chr 5:157,744,945...157,759,370
Ensembl chr 5:157,745,490...157,759,322
JBrowse link
G Slc7a5 solute carrier family 7 member 5 IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr19:54,693,959...54,722,563
Ensembl chr19:54,693,959...54,722,563
JBrowse link
G Snapin SNAP-associated protein IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 2:189,878,159...189,880,743
Ensembl chr 2:189,878,168...189,880,743
JBrowse link
G Sort1 sortilin 1 IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 2:211,078,092...211,156,312
Ensembl chr 2:211,078,334...211,156,312
JBrowse link
G Spag9 sperm associated antigen 9 ISO (PMID:29146937) RGD PMID:29146937 NCBI chr10:81,693,736...81,827,562
Ensembl chr10:81,693,770...81,827,562
JBrowse link
G Sppl2a signal peptide peptidase-like 2A ISO
IBA
(MGI:MGI:5291841|PMID:21896273)
PMID:21873635
RGD PMID:21896273, PMID:21873635 MGI:MGI:5291841, RGD:13792537 NCBI chr 3:119,361,651...119,405,453
Ensembl chr 3:119,361,655...119,405,453
JBrowse link
G Sppl2b signal peptide peptidase-like 2B ISO
IBA
ISS
(PMID:15998642)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:15998642, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 7:11,712,187...11,724,915
Ensembl chr 7:11,712,188...11,724,843
JBrowse link
G Sppl2c signal peptide peptidase like 2C IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:92,245,434...92,248,758
Ensembl chr10:92,245,442...92,248,756
JBrowse link
G Stx17 syntaxin 17 NOT ISO (PMID:10930465) RGD PMID:10930465 NCBI chr 5:63,866,346...63,926,276
Ensembl chr 5:63,870,432...63,922,730
JBrowse link
G Stx7 syntaxin 7 IDA RGD PMID:15133481 RGD:4892614 NCBI chr 1:22,241,655...22,281,850
Ensembl chr 1:22,241,661...22,281,788
JBrowse link
G Stx8 syntaxin 8 IDA RGD PMID:15133481 RGD:4892614 NCBI chr10:54,512,922...54,753,302
Ensembl chr10:54,512,983...54,753,302
JBrowse link
G Syt11 synaptotagmin 11 IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 2:188,112,301...188,138,180
Ensembl chr 2:188,112,286...188,138,177
JBrowse link
G Syt7 synaptotagmin 7 IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 1:226,435,816...226,498,008
Ensembl chr 1:226,435,979...226,493,377
JBrowse link
G Szt2 SZT2 subunit of KICSTOR complex ISO (PMID:28199315) RGD PMID:28199315 NCBI chr 5:137,192,120...137,238,384
Ensembl chr 5:137,190,875...137,238,354
JBrowse link
G Tecpr1 tectonin beta-propeller repeat containing 1 ISO
IBA
ISS
(PMID:22342342)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:22342342, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr12:12,374,132...12,403,382
Ensembl chr12:12,374,790...12,402,552
JBrowse link
G Tfeb transcription factor EB ISO (PMID:22343943), (PMID:22692423) RGD PMID:22343943, PMID:22692423 NCBI chr 9:15,208,141...15,264,101
Ensembl chr 9:15,207,822...15,214,596
JBrowse link
G Tm4sf5 transmembrane 4 L six family member 5 ISO (PMID:30956113) RGD PMID:30956113 NCBI chr10:57,111,907...57,118,299
Ensembl chr10:57,111,907...57,118,299
JBrowse link
G Tm6sf1 transmembrane 6 superfamily member 1 ISO
IBA
(MGI:MGI:5619893|PMID:25422095)
PMID:21873635
RGD PMID:25422095, PMID:21873635 MGI:MGI:5619893, RGD:13792537 NCBI chr 1:143,657,607...143,703,829
Ensembl chr 1:143,661,521...143,703,759
JBrowse link
G Tm9sf1 transmembrane 9 superfamily member 1 IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr15:34,314,645...34,322,172
Ensembl chr15:34,314,656...34,322,115
JBrowse link
G Tmbim1 transmembrane BAX inhibitor motif containing 1 ISO (PMID:16607040) RGD PMID:16607040 NCBI chr 9:81,569,289...81,586,469
Ensembl chr 9:81,569,289...81,586,553
JBrowse link
G Tmem106b transmembrane protein 106B ISO
IBA
ISS
(PMID:24357581)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:24357581, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 4:39,517,679...39,534,491
Ensembl chr 4:39,517,548...39,535,169
JBrowse link
G Tmem150c transmembrane protein 150C IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr14:11,094,655...11,166,323
Ensembl chr14:11,095,163...11,166,428
JBrowse link
G Tmem165 transmembrane protein 165 ISO
ISS
(PMID:23575229)
GO_REF:0000024
RGD
UniProt
PMID:23575229 GO_REF:0000024 NCBI chr14:34,503,037...34,528,262
Ensembl chr14:34,503,038...34,528,262
JBrowse link
G Tmem175 transmembrane protein 175 IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr14:2,083,745...2,100,006
Ensembl chr14:2,083,712...2,100,005
JBrowse link
G Tmem192 transmembrane protein 192 ISO
IBA
(PMID:20370317)
PMID:21873635
RGD PMID:20370317, PMID:21873635 RGD:13792537 NCBI chr16:26,620,525...26,642,537
Ensembl chr16:26,619,598...26,633,796
JBrowse link
G Tmem63a transmembrane protein 63a ISO (PMID:20957757) RGD PMID:20957757 NCBI chr13:99,219,585...99,253,176
Ensembl chr13:99,220,510...99,253,316
JBrowse link
G Tmem79 transmembrane protein 79 ISO
IBA
ISS
(MGI:MGI:5518480|PMID:24060273)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:24060273, PMID:21873635 GO_REF:0000024, MGI:MGI:5518480, RGD:13792537 NCBI chr 2:187,701,522...187,706,452
Ensembl chr 2:187,697,509...187,706,321
JBrowse link
G Tmem9 transmembrane protein 9 ISO (PMID:30374053) RGD PMID:30374053 NCBI chr13:52,854,031...52,871,300
Ensembl chr13:52,854,031...52,871,297
JBrowse link
G Tpcn1 two pore segment channel 1 IEA
IBA
ISS
ISO
GO_REF:0000107
PMID:21873635
GO_REF:0000024
(PMID:19620632)
Ensembl
UniProt
RGD
PMID:19620632, PMID:21873635 GO_REF:0000024, GO_REF:0000107, RGD:13792537 NCBI chr12:41,507,784...41,566,847
Ensembl chr12:41,543,696...41,566,847
JBrowse link
G Tpcn2 two pore segment channel 2 ISO (MGI:MGI:5285171|PMID:19557428)
(PMID:19387438), (PMID:19620632)
RGD PMID:19387438, PMID:19557428, PMID:19620632 MGI:MGI:5285171 NCBI chr 1:218,419,182...218,448,902
Ensembl chr 1:218,419,184...218,448,877
JBrowse link
G Treml4 triggering receptor expressed on myeloid cells-like 4 colocalizes_with ISO (MGI:MGI:5775261|PMID:25848864) RGD PMID:25848864 MGI:MGI:5775261 NCBI chr 9:14,668,691...14,707,122
Ensembl chr 9:14,685,900...14,706,557
JBrowse link
G Trim23 tripartite motif-containing 23 ISO
IBA
ISS
IEA
(PMID:9671726)
PMID:21873635
GO_REF:0000024
GO_REF:0000107
RGD
HGNC
Ensembl
PMID:9671726, PMID:21873635 GO_REF:0000024, GO_REF:0000107, RGD:13792537 NCBI chr 2:34,255,300...34,288,140
Ensembl chr 2:34,255,305...34,288,139
JBrowse link
G Trpm2 transient receptor potential cation channel, subfamily M, member 2 ISO
ISS
(MGI:MGI:5298324|PMID:21753080)
GO_REF:0000024
RGD
UniProt
PMID:21753080 GO_REF:0000024, MGI:MGI:5298324 NCBI chr20:11,434,062...11,482,880
Ensembl chr20:11,436,267...11,482,051
JBrowse link
G Tspan1 tetraspanin 1 IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 5:135,019,206...135,032,412
Ensembl chr 5:135,019,778...135,025,084
JBrowse link
G Uba1 ubiquitin-like modifier activating enzyme 1 colocalizes_with ISO (PMID:1376922) RGD PMID:1376922 NCBI chr  X:1,723,135...1,745,147
Ensembl chr  X:1,723,174...1,741,701
JBrowse link
G Ubxn6 UBX domain protein 6 ISO (PMID:21822278) RGD PMID:21822278 NCBI chr 9:10,995,516...11,000,643
Ensembl chr 9:10,995,198...11,000,642
JBrowse link
G Vamp7 vesicle-associated membrane protein 7 IDA PMID:10459012 RGD
UniProt
PMID:15133481, PMID:10459012 RGD:4892614, RGD:8554473 NCBI chr12:18,996,566...19,033,714
Ensembl chr12:18,996,591...19,030,381
JBrowse link
G Vamp8 vesicle-associated membrane protein 8 IDA
ISO
(PMID:23217709) RGD PMID:23217709, PMID:15133481 RGD:4892614 NCBI chr 4:100,250,301...100,252,756
Ensembl chr 4:100,250,301...100,252,755
JBrowse link
G Vps11 VPS11 core subunit of CORVET and HOPS complexes IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 8:48,677,492...48,692,295
Ensembl chr 8:48,677,492...48,692,295
JBrowse link
G Vps13a vacuolar protein sorting 13 homolog A ISO (PMID:30709847) RGD PMID:30709847 NCBI chr 1:235,352,513...235,813,597
Ensembl chr 1:235,653,121...235,813,030
JBrowse link
G Vps16 VPS16 core subunit of CORVET and HOPS complexes IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 3:122,947,887...122,969,543
Ensembl chr 3:122,947,913...122,969,541
JBrowse link
G Vps33a VPS33A core subunit of CORVET and HOPS complexes IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr12:38,459,816...38,482,903
Ensembl chr12:38,459,832...38,484,512
JBrowse link
G Vps33b VPS33B, late endosome and lysosome associated IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 1:142,060,955...142,083,955
Ensembl chr 1:142,060,955...142,083,953
JBrowse link
G Vps39 VPS39 subunit of HOPS complex ISO (PMID:23167963) RGD PMID:23167963 NCBI chr 3:112,087,213...112,125,307
Ensembl chr 3:112,087,677...112,125,318
JBrowse link
G Vps41 VPS41 subunit of HOPS complex ISO (PMID:23167963) RGD PMID:23167963 NCBI chr17:48,643,754...48,810,633
Ensembl chr17:48,648,879...48,810,991
JBrowse link
G Vti1b vesicle transport through interaction with t-SNAREs 1B ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:18033301), (PMID:23217709)
UniProt
Ensembl
RGD
PMID:18033301, PMID:23217709 GO_REF:0000024, GO_REF:0000107 NCBI chr 6:102,340,261...102,353,612
Ensembl chr 6:102,339,857...102,353,403
JBrowse link
G Wdr24 WD repeat domain 24 ISO (PMID:28199306) RGD PMID:28199306 NCBI chr10:15,191,078...15,195,860
Ensembl chr10:15,191,078...15,195,860
JBrowse link
G Wdr59 WD repeat domain 59 ISO (PMID:28199306) RGD PMID:28199306 NCBI chr19:43,651,686...43,714,391
Ensembl chr19:43,651,148...43,714,418
JBrowse link
G Wdr81 WD repeat domain 81 ISO (PMID:27126989) RGD PMID:27126989 NCBI chr10:62,273,817...62,287,213
Ensembl chr10:62,273,800...62,287,189
JBrowse link
phagolysosome membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hrg histidine-rich glycoprotein ISO (MGI:MGI:5527134|PMID:23395172) RGD PMID:23395172 MGI:MGI:5527134 NCBI chr11:81,621,274...81,639,938
Ensembl chr11:81,621,283...81,639,952
JBrowse link
G Lamp1 lysosomal-associated membrane protein 1 ISO (MGI:MGI:5527134|PMID:23395172) RGD PMID:23395172 MGI:MGI:5527134 NCBI chr16:81,689,576...81,714,341
Ensembl chr16:81,689,335...81,714,419
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 20610
    cellular anatomical entity 20359
      cytoplasm 11459
        vacuole 585
          vacuolar membrane 267
            lytic vacuole membrane 202
              fungal-type vacuole membrane + 0
              lysosomal membrane + 202
Path 2
Term Annotations click to browse term
  cellular_component 20610
    cellular anatomical entity 20359
      organelle 13271
        membrane-bounded organelle 11249
          intracellular membrane-bounded organelle 10505
            vacuole 585
              vacuolar membrane 267
                lytic vacuole membrane 202
                  fungal-type vacuole membrane + 0
                  lysosomal membrane + 202
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.