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ONTOLOGY REPORT - ANNOTATIONS


Term:anchored component of synaptic vesicle membrane
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Accession:GO:0098993 term browser browse the term
Definition:The component of the synaptic vesicle membrane consisting of the gene products that are tethered to the membrane only by a covalently attached anchor, such as a lipid group that is embedded in the membrane. Gene products with peptide sequences that are embedded in the membrane are excluded from this grouping.


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anchored component of synaptic vesicle membrane term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cplx3 complexin 3 ISO (MGI:3582382|PMID:15911881) RGD PMID:15911881 MGI:3582382 NCBI chr 8:62,379,502...62,386,264
Ensembl chr 8:62,379,502...62,386,264
JBrowse link
G Dnajc5 DnaJ heat shock protein family (Hsp40) member C5 IDA PMID:11580898
PMID:7535880
SynGO PMID:11580898, PMID:7535880 RGD:13702369, RGD:632551 NCBI chr 3:177,012,714...177,047,787
Ensembl chr 3:177,013,604...177,043,902
JBrowse link
G Rab10 RAB10, member RAS oncogene family EXP
IMP
IDA
PMID:20926670 SynGO PMID:20926670, PMID:20926670, PMID:20926670 RGD:13432355, RGD:13432355, RGD:13432355 NCBI chr 6:27,668,387...27,721,120
Ensembl chr 6:27,668,403...27,721,120
JBrowse link
G Rab11b RAB11B, member RAS oncogene family IDA
EXP
PMID:17110340
PMID:20926670
SynGO PMID:17110340, PMID:20926670, PMID:20926670 RGD:12050113, RGD:13432355, RGD:13432355 NCBI chr 7:18,598,991...18,612,132
Ensembl chr 7:18,598,880...18,612,147
JBrowse link
G Rab14 RAB14, member RAS oncogene family EXP
IMP
IDA
PMID:20926670 SynGO PMID:20926670, PMID:20926670, PMID:20926670 RGD:13432355, RGD:13432355, RGD:13432355 NCBI chr 3:14,373,270...14,395,357
Ensembl chr 3:14,373,275...14,395,362
JBrowse link
G Rab26 RAB26, member RAS oncogene family ISO (PMID:25643395) RGD PMID:25643395 NCBI chr10:13,894,271...13,898,578
Ensembl chr10:13,893,290...13,898,855
JBrowse link
G Rab27b RAB27B, member RAS oncogene family IDA
EXP
PMID:20926670 SynGO PMID:20926670, PMID:20926670 RGD:13432355, RGD:13432355 NCBI chr18:68,486,006...68,644,595
Ensembl chr18:68,488,942...68,551,558
JBrowse link
G Rab2a RAB2A, member RAS oncogene family EXP
IDA
PMID:20926670 SynGO PMID:20926670, PMID:20926670 RGD:13432355, RGD:13432355 NCBI chr 5:21,632,654...21,696,721
Ensembl chr 5:21,632,926...21,695,519
JBrowse link
G Rab35 RAB35, member RAS oncogene family IDA
EXP
PMID:20926670 SynGO PMID:20926670, PMID:20926670 RGD:13432355, RGD:13432355 NCBI chr12:46,704,274...46,718,404
Ensembl chr12:46,704,275...46,718,355
JBrowse link
G Rab3a RAB3A, member RAS oncogene family IDA
ISO
EXP
IBA
PMID:17110340
(MGI:2388866|PMID:12167638)
PMID:21873635
PMID:20926670
RGD PMID:12167638, PMID:17110340, PMID:17110340, PMID:21873635, PMID:20926670 MGI:2388866, RGD:12050113, RGD:12050113, RGD:13792537, RGD:13432355 NCBI chr16:20,435,098...20,439,206
Ensembl chr16:20,435,101...20,439,206
JBrowse link
G Rab3b RAB3B, member RAS oncogene family IDA
ISO
EXP
PMID:20926670
(PMID:20007772)
PMID:17110340
RGD PMID:20007772, PMID:20926670, PMID:17110340, PMID:17110340 RGD:13432355, RGD:12050113, RGD:12050113 NCBI chr 5:128,501,789...128,568,170
Ensembl chr 5:128,501,847...128,568,188
JBrowse link
G Rab3c RAB3C, member RAS oncogene family IDA PMID:8157621 SynGO PMID:8157621 RGD:13702220 NCBI chr 2:41,570,955...41,786,681
Ensembl chr 2:41,570,597...41,785,792
JBrowse link
G Rab4a RAB4A, member RAS oncogene family IDA PMID:20926670 SynGO PMID:20926670 RGD:13432355 NCBI chr19:56,585,598...56,613,078
Ensembl chr19:56,585,767...56,613,075
JBrowse link
G Rab4b RAB4B, member RAS oncogene family EXP
IMP
IDA
PMID:20926670 SynGO PMID:20926670, PMID:20926670, PMID:20926670 RGD:13432355, RGD:13432355, RGD:13432355 NCBI chr 1:83,979,298...83,990,680
Ensembl chr 1:83,979,298...83,990,588
JBrowse link
G Rab5a RAB5A, member RAS oncogene family IDA
IMP
IBA
EXP
PMID:17110340
PMID:20926670
PMID:21873635
SynGO
GO_Central
PMID:17110340, PMID:20926670, PMID:21873635, PMID:20926670, PMID:20926670 RGD:12050113, RGD:13432355, RGD:13792537, RGD:13432355, RGD:13432355 NCBI chr 9:5,910...6,065 JBrowse link
G Rab5al1 Rab5a, member RAS oncogene family-like 1 IDA
EXP
IBA
IMP
PMID:17110340
PMID:20926670
PMID:21873635
SynGO
GO_Central
PMID:17110340, PMID:20926670, PMID:20926670, PMID:21873635, PMID:20926670 RGD:12050113, RGD:13432355, RGD:13432355, RGD:13792537, RGD:13432355 NCBI chr14:72,889,022...72,891,156 JBrowse link
G Rab5b RAB5B, member RAS oncogene family IDA
EXP
PMID:20926670 SynGO PMID:20926670, PMID:20926670 RGD:13432355, RGD:13432355 NCBI chr 7:3,104,530...3,123,384
Ensembl chr 7:3,104,551...3,123,297
JBrowse link
G Rab5c RAB5C, member RAS oncogene family IDA
EXP
PMID:20926670 SynGO PMID:20926670, PMID:20926670 RGD:13432355, RGD:13432355 NCBI chr10:88,621,924...88,645,364
Ensembl chr10:88,621,925...88,645,364
JBrowse link
G Rab7a RAB7A, member RAS oncogene family ISO
IMP
IDA
EXP
(PMID:20926670) RGD PMID:20926670, PMID:20926670, PMID:20926670, PMID:20926670 RGD:13432355, RGD:13432355, RGD:13432355 NCBI chr 4:119,910,461...119,963,065
Ensembl chr 4:119,910,478...119,959,173
JBrowse link
G Syn1 synapsin I IDA PMID:17110340 SynGO PMID:17110340 RGD:12050113 NCBI chr  X:1,321,315...1,379,202
Ensembl chr  X:1,321,315...1,379,198
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 20602
    cellular anatomical entity 20292
      intrinsic component of membrane 6969
        anchored component of membrane 162
          anchored component of synaptic vesicle membrane 20
Path 2
Term Annotations click to browse term
  cellular_component 20602
    cellular anatomical entity 20292
      organelle 13274
        membrane-bounded organelle 11259
          vesicle 2065
            intracellular vesicle 1906
              cytoplasmic vesicle 1900
                transport vesicle 440
                  transport vesicle membrane 195
                    exocytic vesicle membrane 133
                      synaptic vesicle membrane 133
                        intrinsic component of synaptic vesicle membrane 67
                          anchored component of synaptic vesicle membrane 20
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.