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ONTOLOGY REPORT - ANNOTATIONS


Term:vesicle-mediated transport in synapse
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Accession:GO:0099003 term browser browse the term
Definition:Any vesicle-mediated transport that occurs in a synapse.


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vesicle-mediated transport in synapse term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ap3d1 adaptor related protein complex 3 subunit delta 1 JBrowse link 7 11,838,639 11,873,992 RGD:1624291
G Clstn1 calsyntenin 1 JBrowse link 5 166,533,262 166,601,686 RGD:1624291
G Cplx1 complexin 1 JBrowse link 14 2,194,895 2,226,610 RGD:1624291
G Grip1 glutamate receptor interacting protein 1 JBrowse link 7 64,672,723 64,854,939 RGD:1600115
RGD:1624291
G Grip2 glutamate receptor interacting protein 2 JBrowse link 4 123,585,184 123,636,040 RGD:1624291
G Mapk10 mitogen activated protein kinase 10 JBrowse link 14 8,079,955 8,371,508 RGD:13702338
G Myo5b myosin Vb JBrowse link 18 70,426,865 70,729,985 RGD:11533643
G Nsg1 neuronal vesicle trafficking associated 1 JBrowse link 14 77,380,264 77,402,007 RGD:1624291
G Rab11a RAB11a, member RAS oncogene family JBrowse link 8 70,192,975 70,215,719 RGD:2306457
G Rab8a RAB8A, member RAS oncogene family JBrowse link 16 19,355,047 19,376,776 RGD:2306456
RGD:2306457
G Scrib scribble planar cell polarity protein JBrowse link 7 117,105,810 117,128,802 RGD:12050130
G Snap23 synaptosome associated protein 23 JBrowse link 3 112,333,972 112,362,960 RGD:12050145
G Snap47 synaptosome associated protein 47 JBrowse link 10 45,757,196 45,798,734 RGD:1624291
G Stx3 syntaxin 3 JBrowse link 1 228,137,781 228,195,004 RGD:1624291
G Stx4 syntaxin 4 JBrowse link 1 199,287,384 199,295,606 RGD:13702188
G Vps35 VPS35 retromer complex component JBrowse link 19 27,464,937 27,500,636 RGD:1624291
aminergic neurotransmitter loading into synaptic vesicle term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ddc dopa decarboxylase JBrowse link 14 91,905,919 91,996,816 RGD:5128868
G Slc18a1 solute carrier family 18 member A1 JBrowse link 16 22,358,646 22,395,183 RGD:13792537
G Slc18a2 solute carrier family 18 member A2 JBrowse link 1 280,397,831 280,457,968 RGD:729674
RGD:13792537
RGD:5128868
G Th tyrosine hydroxylase JBrowse link 1 216,073,034 216,080,287 RGD:5128868
calcium ion-regulated exocytosis of neurotransmitter term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cacna1a calcium voltage-gated channel subunit alpha1 A JBrowse link 19 25,453,236 25,749,550 RGD:1624291
RGD:1600115
G Doc2b double C2 domain beta JBrowse link 10 63,921,255 63,952,944 RGD:8554647
RGD:1624291
RGD:1600115
G Rims1 regulating synaptic membrane exocytosis 1 JBrowse link 9 28,440,408 28,973,246 RGD:1624291
RGD:13792537
G Rims2 regulating synaptic membrane exocytosis 2 JBrowse link 7 78,091,998 78,594,164 RGD:1624291
RGD:13792537
RGD:1600115
G Rims3 regulating synaptic membrane exocytosis 3 JBrowse link 5 139,790,395 139,819,014 RGD:13792537
G Snap25 synaptosome associated protein 25 JBrowse link 3 129,697,408 129,788,417 RGD:1581082
G Stx1b syntaxin 1B JBrowse link 1 199,251,842 199,270,465 RGD:1624291
G Syt1 synaptotagmin 1 JBrowse link 7 50,084,063 50,638,996 RGD:1624291
RGD:13792537
G Syt10 synaptotagmin 10 JBrowse link 7 130,769,039 130,827,030 RGD:13792537
G Syt12 synaptotagmin 12 JBrowse link 1 219,690,013 219,719,359 RGD:13792537
G Syt17 synaptotagmin 17 JBrowse link 1 188,034,614 188,101,590 RGD:13792537
G Syt2 synaptotagmin 2 JBrowse link 13 51,569,248 51,577,824 RGD:13792537
G Syt3 synaptotagmin 3 JBrowse link 1 100,379,236 100,407,862 RGD:13792537
G Syt5 synaptotagmin 5 JBrowse link 1 72,859,806 72,867,934 RGD:13792537
G Syt6 synaptotagmin 6 JBrowse link 2 206,064,181 206,119,034 RGD:13792537
G Syt7 synaptotagmin 7 JBrowse link 1 226,435,816 226,498,008 RGD:1624291
RGD:1600115
G Syt8 synaptotagmin 8 JBrowse link 1 215,605,408 215,607,602 RGD:13792537
G Syt9 synaptotagmin 9 JBrowse link 1 171,592,703 171,769,780 RGD:13792537
calcium-dependent activation of synaptic vesicle fusion term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Prrt2 proline-rich transmembrane protein 2 JBrowse link 1 198,451,042 198,454,998 RGD:1624291
G Syt1 synaptotagmin 1 JBrowse link 7 50,084,063 50,638,996 RGD:1624291
G Syt2 synaptotagmin 2 JBrowse link 13 51,569,248 51,577,824 RGD:1624291
G Syt7 synaptotagmin 7 JBrowse link 1 226,435,816 226,498,008 RGD:1624291
G Syt9 synaptotagmin 9 JBrowse link 1 171,592,703 171,769,780 RGD:1624291
clathrin-dependent synaptic vesicle endocytosis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Btbd8 BTB domain containing 8 JBrowse link 14 3,282,422 3,351,740 RGD:1600115
RGD:1624291
G Itsn1 intersectin 1 JBrowse link 11 31,943,119 32,069,249 RGD:13792537
G Itsn2 intersectin 2 JBrowse link 6 30,098,378 30,208,694 RGD:13792537
fast, calcium ion-dependent exocytosis of neurotransmitter term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Syt1 synaptotagmin 1 JBrowse link 7 50,084,063 50,638,996 RGD:1600115
RGD:1624291
induction of synaptic vesicle exocytosis by positive regulation of presynaptic cytosolic calcium ion concentration term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cacna1b calcium voltage-gated channel subunit alpha1 B JBrowse link 3 1,740,026 1,924,959 RGD:1600115
G Cacna1d calcium voltage-gated channel subunit alpha1 D JBrowse link 16 6,110,294 6,405,022 RGD:1600115
G Cacnb2 calcium voltage-gated channel auxiliary subunit beta 2 JBrowse link 17 81,673,862 82,019,219 RGD:1600115
G Cacnb4 calcium voltage-gated channel auxiliary subunit beta 4 JBrowse link 3 37,950,846 38,211,478 RGD:1600115
G Cdk5 cyclin-dependent kinase 5 JBrowse link 4 7,282,945 7,287,427 RGD:1600115
G Cnr1 cannabinoid receptor 1 JBrowse link 5 49,307,584 49,333,064 RGD:1600115
G Erc1 ELKS/RAB6-interacting/CAST family member 1 JBrowse link 4 152,087,393 152,380,023 RGD:1600115
negative regulation of synaptic vesicle clustering term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pten phosphatase and tensin homolog JBrowse link 1 251,421,814 251,487,634 RGD:1624291
negative regulation of synaptic vesicle endocytosis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Syt11 synaptotagmin 11 JBrowse link 2 188,112,301 188,138,180 RGD:11079192
negative regulation of synaptic vesicle exocytosis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Braf B-Raf proto-oncogene, serine/threonine kinase JBrowse link 4 67,389,331 67,520,549 RGD:1624291
G Fmr1 FMRP translational regulator 1 JBrowse link X 154,684,924 154,722,369 RGD:11059581
G Rap1a RAP1A, member of RAS oncogene family JBrowse link 2 208,193,950 208,215,186 RGD:1624291
RGD:13792537
G Rap1b RAP1B, member of RAS oncogene family JBrowse link 7 60,850,406 60,878,226 RGD:1624291
RGD:13792537
G Syt4 synaptotagmin 4 JBrowse link 18 24,172,580 24,181,989 RGD:1624291
negative regulation of synaptic vesicle recycling term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cyfip1 cytoplasmic FMR1 interacting protein 1 JBrowse link 1 114,258,773 114,347,138 RGD:11342679
G Stx1b syntaxin 1B JBrowse link 1 199,251,842 199,270,465 RGD:1624291
neurotransmitter loading into synaptic vesicle term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Slc17a6 solute carrier family 17 member 6 JBrowse link 1 106,980,463 107,038,717 RGD:1624291
RGD:13792537
RGD:13702232
RGD:1600115
G Slc17a7 solute carrier family 17 member 7 JBrowse link 1 101,161,265 101,172,292 RGD:12050146
RGD:13792537
RGD:1624291
G Slc17a8 solute carrier family 17 member 8 JBrowse link 7 30,215,231 30,274,993 RGD:1624291
RGD:13792537
G Slc18a2 solute carrier family 18 member A2 JBrowse link 1 280,397,831 280,457,968 RGD:1600115
RGD:1624291
G Slc18a3 solute carrier family 18 member A3 JBrowse link 16 8,682,668 8,685,529 RGD:13702424
RGD:1624291
G Slc32a1 solute carrier family 32 member 1 JBrowse link 3 155,102,980 155,107,815 RGD:730037
RGD:13792537
positive regulation of calcium ion-dependent exocytosis of neurotransmitter term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Syt1 synaptotagmin 1 JBrowse link 7 50,084,063 50,638,996 RGD:1600115
RGD:1624291
positive regulation of synaptic vesicle clustering term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bcl2l1 Bcl2-like 1 JBrowse link 3 148,259,594 148,314,191 RGD:12793033
G Cdh2 cadherin 2 JBrowse link 18 8,146,971 8,366,037 RGD:1624291
RGD:1600115
G Magi2 membrane associated guanylate kinase, WW and PDZ domain containing 2 JBrowse link 4 10,995,241 12,472,423 RGD:1624291
RGD:1600115
G Nlgn1 neuroligin 1 JBrowse link 2 111,057,291 111,973,681 RGD:1624291
G Nlgn2 neuroligin 2 JBrowse link 10 56,431,586 56,444,847 RGD:1624291
RGD:1600115
G Nlgn3 neuroligin 3 JBrowse link X 71,199,390 71,227,460 RGD:1624291
RGD:1600115
G Picalm phosphatidylinositol binding clathrin assembly protein JBrowse link 1 154,377,229 154,458,966 RGD:13506174
G Snap91 synaptosome associated protein 91 JBrowse link 8 94,447,558 94,564,772 RGD:13506174
positive regulation of synaptic vesicle endocytosis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ap2m1 adaptor related protein complex 2 subunit mu 1 JBrowse link 11 84,041,184 84,047,542 RGD:13461856
G Bcl2l1 Bcl2-like 1 JBrowse link 3 148,259,594 148,314,191 RGD:12793033
G Dnm1 dynamin 1 JBrowse link 3 11,338,081 11,382,043 RGD:8554440
G Dnm1l dynamin 1-like JBrowse link 11 88,830,968 88,882,271 RGD:12793033
G LOC102556337 mitochondrial fission factor-like JBrowse link 9 90,880,586 90,908,848 RGD:12793033
G Lrrk2 leucine-rich repeat kinase 2 JBrowse link 7 132,857,311 133,018,549 RGD:13462049
G Mff mitochondrial fission factor JBrowse link 9 88,490,280 88,518,517 RGD:12793033
G Nlgn1 neuroligin 1 JBrowse link 2 111,057,291 111,973,681 RGD:1624291
RGD:8554760
G Picalm phosphatidylinositol binding clathrin assembly protein JBrowse link 1 154,377,229 154,458,966 RGD:13506237
G Ppp3cc protein phosphatase 3 catalytic subunit gamma JBrowse link 15 51,896,427 51,968,075 RGD:11532172
G Sh3gl1 SH3 domain containing GRB2 like 1, endophilin A2 JBrowse link 9 11,031,847 11,055,285 RGD:13464359
G Snap91 synaptosome associated protein 91 JBrowse link 8 94,447,558 94,564,772 RGD:13506237
G Tor1a torsin family 1, member A JBrowse link 3 9,800,322 9,807,318 RGD:1624291
RGD:1600115
positive regulation of synaptic vesicle exocytosis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bcl2l1 Bcl2-like 1 JBrowse link 3 148,259,594 148,314,191 RGD:12793033
G Dnm1l dynamin 1-like JBrowse link 11 88,830,968 88,882,271 RGD:12793033
G Nlgn1 neuroligin 1 JBrowse link 2 111,057,291 111,973,681 RGD:1624291
RGD:8554760
G Slc4a8 solute carrier family 4 member 8 JBrowse link 7 142,397,352 142,467,398 RGD:1600115
RGD:1624291
positive regulation of synaptic vesicle fusion to presynaptic active zone membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Rims1 regulating synaptic membrane exocytosis 1 JBrowse link 9 28,440,408 28,973,246 RGD:633897
positive regulation of synaptic vesicle priming term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Rims1 regulating synaptic membrane exocytosis 1 JBrowse link 9 28,440,408 28,973,246 RGD:10047275
G Unc13b unc-13 homolog B JBrowse link 5 58,505,449 58,714,396 RGD:10047275
positive regulation of synaptic vesicle recycling term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dnm1 dynamin 1 JBrowse link 3 11,338,081 11,382,043 RGD:8553820
G Dnm3 dynamin 3 JBrowse link 13 79,906,711 80,379,967 RGD:13462065
G Plaa phospholipase A2, activating protein JBrowse link 5 113,548,913 113,578,928 RGD:1624291
RGD:1600115
postsynaptic neurotransmitter receptor internalization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ap2b1 adaptor related protein complex 2 subunit beta 1 JBrowse link 10 70,516,462 70,621,973 RGD:1624291
G Ap2m1 adaptor related protein complex 2 subunit mu 1 JBrowse link 11 84,041,184 84,047,542 RGD:13432317
RGD:1624291
G Caly calcyon neuron-specific vesicular protein JBrowse link 1 212,537,851 212,549,040 RGD:1624291
G Dnm1 dynamin 1 JBrowse link 3 11,338,081 11,382,043 RGD:13792537
G Dnm2 dynamin 2 JBrowse link 8 22,458,869 22,540,649 RGD:13792537
G Dnm3 dynamin 3 JBrowse link 13 79,906,711 80,379,967 RGD:8553820
RGD:13792537
G Eps15 epidermal growth factor receptor pathway substrate 15 JBrowse link 5 128,923,809 129,022,268 RGD:13702241
G Mx1 myxovirus (influenza virus) resistance 1 JBrowse link 11 37,891,150 37,916,775 RGD:13792537
G Mx2 MX dynamin like GTPase 2 JBrowse link 11 38,035,306 38,066,185 RGD:13792537
G Myo6 myosin VI JBrowse link 8 87,583,649 87,731,271 RGD:1624291
G Synj1 synaptojanin 1 JBrowse link 11 31,105,784 31,181,573 RGD:1624291
presynaptic dense core vesicle exocytosis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cadps calcium dependent secretion activator JBrowse link 15 15,275,489 15,690,575 RGD:1600115
RGD:1624291
G Stxbp1 syntaxin binding protein 1 JBrowse link 3 11,823,779 11,885,479 RGD:1624291
G Syt6 synaptotagmin 6 JBrowse link 2 206,064,181 206,119,034 RGD:13702162
G Unc13a unc-13 homolog A JBrowse link 16 20,056,398 20,103,951 RGD:1600115
RGD:13792537
RGD:1624291
G Unc13b unc-13 homolog B JBrowse link 5 58,505,449 58,714,396 RGD:1624291
RGD:13792537
G Unc13c unc-13 homolog C JBrowse link 8 80,202,736 80,656,363 RGD:13792537
regulation of calcium ion-dependent exocytosis of neurotransmitter term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atp2a2 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2 JBrowse link 12 39,553,903 39,603,326 RGD:1624291
G Rab3gap1 RAB3 GTPase activating protein catalytic subunit 1 JBrowse link 13 44,578,208 44,649,876 RGD:1624291
RGD:1600115
regulation of neurotransmitter loading into synaptic vesicle term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Slc10a4 solute carrier family 10, member 4 JBrowse link 14 37,764,839 37,770,059 RGD:1624291
regulation of postsynaptic neurotransmitter receptor internalization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Akap5 A-kinase anchoring protein 5 JBrowse link 6 99,356,509 99,361,909 RGD:2313185
G Arc activity-regulated cytoskeleton-associated protein JBrowse link 7 115,907,097 115,911,059 RGD:1624291
G Atad1 ATPase family, AAA domain containing 1 JBrowse link 1 251,234,702 251,386,996 RGD:1624291
G Drd3 dopamine receptor D3 JBrowse link 11 61,819,102 61,883,223 RGD:13702467
G Drd4 dopamine receptor D4 JBrowse link 1 214,278,296 214,282,818 RGD:1600115
RGD:1624291
G Efnb2 ephrin B2 JBrowse link 16 86,631,151 86,672,050 RGD:1624291
G Gsg1l GSG1-like JBrowse link 1 197,271,704 197,482,776 RGD:1624291
G Hap1 huntingtin-associated protein 1 JBrowse link 10 88,257,975 88,266,210 RGD:13702182
G Hpca hippocalcin JBrowse link 5 147,295,124 147,305,757 RGD:13702412
G Iqsec1 IQ motif and Sec7 domain ArfGEF 1 JBrowse link 4 123,400,717 123,454,656 RGD:1624291
G Itgb3 integrin subunit beta 3 JBrowse link 10 92,667,869 92,783,413 RGD:1624291
G Nedd4 NEDD4 E3 ubiquitin protein ligase JBrowse link 8 79,323,408 79,408,842 RGD:13702142
G Nrg1 neuregulin 1 JBrowse link 16 62,969,573 64,065,063 RGD:1624291
G Numb NUMB, endocytic adaptor protein JBrowse link 6 107,279,917 107,325,345 RGD:1600115
RGD:1624291
G Ophn1 oligophrenin 1 JBrowse link X 68,185,865 68,579,518 RGD:1624291
G Pacsin1 protein kinase C and casein kinase substrate in neurons 1 JBrowse link 20 7,241,248 7,286,702 RGD:13702454
RGD:13702399
G Pick1 protein interacting with PRKCA 1 JBrowse link 7 120,465,472 120,484,824 RGD:13702248
G Pip5k1c phosphatidylinositol-4-phosphate 5-kinase type 1 gamma JBrowse link 7 11,267,207 11,294,291 RGD:1624291
G Ppp3r1 protein phosphatase 3, regulatory subunit B, alpha JBrowse link 14 100,311,224 100,360,879 RGD:1624291
G Scrib scribble planar cell polarity protein JBrowse link 7 117,105,810 117,128,802 RGD:12050130
G Sirt2 sirtuin 2 JBrowse link 1 86,948,866 86,971,954 RGD:13702139
G Syne1 spectrin repeat containing nuclear envelope protein 1 JBrowse link 1
1
41,608,287
41,844,840
41,763,591
42,086,662
RGD:13209020
G Synj1 synaptojanin 1 JBrowse link 11 31,105,784 31,181,573 RGD:1624291
G Usp46 ubiquitin specific peptidase 46 JBrowse link 14 36,687,134 36,755,360 RGD:11056935
regulation of presynaptic dense core granule exocytosis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G P2rx7 purinergic receptor P2X 7 JBrowse link 12 39,353,613 39,396,042 RGD:13702177
G Syt4 synaptotagmin 4 JBrowse link 18 24,172,580 24,181,989 RGD:1624291
regulation of recycling endosome localization within postsynapse term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gripap1 GRIP1 associated protein 1 JBrowse link X 15,523,929 15,553,702 RGD:12050105
RGD:13792537
regulation of synaptic vesicle budding from presynaptic endocytic zone membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Slc2a4 solute carrier family 2 member 4 JBrowse link 10 56,552,921 56,558,562 RGD:13702195
regulation of synaptic vesicle clustering term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pcdh17 protocadherin 17 JBrowse link 15 67,555,835 67,647,990 RGD:1624291
regulation of synaptic vesicle cycle term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bsn bassoon (presynaptic cytomatrix protein) JBrowse link 8 116,873,721 116,965,396 RGD:1600115
RGD:1624291
G Cdk5r1 cyclin-dependent kinase 5 regulatory subunit 1 JBrowse link 10 67,862,054 67,863,255 RGD:13702178
G Dnajc5 DnaJ heat shock protein family (Hsp40) member C5 JBrowse link 3 177,012,714 177,047,787 RGD:1624291
G Nrxn1 neurexin 1 JBrowse link 6 13,886,757 15,191,660 RGD:1624291
G Pld1 phospholipase D1 JBrowse link 2 113,651,967 113,849,403 RGD:1600115
RGD:1624291
G Pls3 plastin 3 JBrowse link X 119,030,311 119,124,268 RGD:1624291
G Prkar1b protein kinase cAMP-dependent type I regulatory subunit beta JBrowse link 12 17,614,536 17,713,567 RGD:1624291
G Rab3b RAB3B, member RAS oncogene family JBrowse link 5 128,501,789 128,568,170 RGD:1624291
G Rapgef4 Rap guanine nucleotide exchange factor 4 JBrowse link 3 58,632,338 58,925,127 RGD:1600115
RGD:1624291
G Snap29 synaptosome associated protein 29 JBrowse link 11 87,827,633 87,858,107 RGD:13702146
G Syn1 synapsin I JBrowse link X 1,321,315 1,379,202 RGD:1624291
regulation of synaptic vesicle docking term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Camk2a calcium/calmodulin-dependent protein kinase II alpha JBrowse link 18 56,193,978 56,295,869 RGD:1600115
RGD:1624291
G Septin5 septin 5 JBrowse link 11 86,516,377 86,522,169 RGD:1624291
regulation of synaptic vesicle endocytosis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Btbd9 BTB domain containing 9 JBrowse link 20 8,899,286 9,253,936 RGD:1624291
G Calm1 calmodulin 1 JBrowse link 6 124,217,241 124,225,292 RGD:12793033
G Calm2 calmodulin 2 JBrowse link 6 11,067,675 11,080,078 RGD:12793033
G Calm3 calmodulin 3 JBrowse link 1 78,844,520 78,851,628 RGD:12793033
G Dgkq diacylglycerol kinase, theta JBrowse link 14 2,069,409 2,083,370 RGD:1624291
G Dnm1 dynamin 1 JBrowse link 3 11,338,081 11,382,043 RGD:13504740
G Lrrk2 leucine-rich repeat kinase 2 JBrowse link 7 132,857,311 133,018,549 RGD:1624291
G Picalm phosphatidylinositol binding clathrin assembly protein JBrowse link 1 154,377,229 154,458,966 RGD:8554167
G Pip5k1c phosphatidylinositol-4-phosphate 5-kinase type 1 gamma JBrowse link 7 11,267,207 11,294,291 RGD:1624291
G Ppp3cb protein phosphatase 3 catalytic subunit beta JBrowse link 15 4,209,702 4,236,895 RGD:1600115
RGD:1624291
G Ppp3cc protein phosphatase 3 catalytic subunit gamma JBrowse link 15 51,896,427 51,968,075 RGD:11532172
G Rock1 Rho-associated coiled-coil containing protein kinase 1 JBrowse link 18 1,273,490 1,390,790 RGD:1624291
RGD:1600115
G Scamp5 secretory carrier membrane protein 5 JBrowse link 8 62,221,820 62,266,269 RGD:13702419
G Sh3gl1 SH3 domain containing GRB2 like 1, endophilin A2 JBrowse link 9 11,031,847 11,055,285 RGD:13463484
G Slc17a7 solute carrier family 17 member 7 JBrowse link 1 101,161,265 101,172,292 RGD:13504741
G Snap91 synaptosome associated protein 91 JBrowse link 8 94,447,558 94,564,772 RGD:8554167
G Syt7 synaptotagmin 7 JBrowse link 1 226,435,816 226,498,008 RGD:1624291
G Vamp4 vesicle-associated membrane protein 4 JBrowse link 13 80,460,699 80,483,597 RGD:11058152
regulation of synaptic vesicle exocytosis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adcy1 adenylate cyclase 1 JBrowse link 14 87,311,970 87,429,880 RGD:1624291
G Adora2a adenosine A2a receptor JBrowse link 20 14,265,251 14,282,873 RGD:1625642
G Adora2b adenosine A2B receptor JBrowse link 10 48,569,563 48,586,366 RGD:1600115
RGD:1624291
G Adora3 adenosine A3 receptor JBrowse link 2 208,336,909 208,379,217 RGD:13702310
G Adra1a adrenoceptor alpha 1A JBrowse link 15 43,296,997 43,398,314 RGD:13702265
G Adra2a adrenoceptor alpha 2A JBrowse link 1 274,766,283 274,769,083 RGD:1624291
G Adrb2 adrenoceptor beta 2 JBrowse link 18 57,513,792 57,515,834 RGD:5129150
G Apba1 amyloid beta precursor protein binding family A member 1 JBrowse link 1 241,594,565 241,796,512 RGD:1600115
RGD:1624291
G Apba2 amyloid beta precursor protein binding family A member 2 JBrowse link 1 125,367,273 125,547,741 RGD:1624291
G Bace1 beta-secretase 1 JBrowse link 8 50,140,092 50,162,388 RGD:1624291
G Cacnb4 calcium voltage-gated channel auxiliary subunit beta 4 JBrowse link 3 37,950,846 38,211,478 RGD:1624291
G Calm1 calmodulin 1 JBrowse link 6 124,217,241 124,225,292 RGD:12793033
G Calm2 calmodulin 2 JBrowse link 6 11,067,675 11,080,078 RGD:12793033
G Calm3 calmodulin 3 JBrowse link 1 78,844,520 78,851,628 RGD:12793033
G Cask calcium/calmodulin dependent serine protein kinase JBrowse link X 9,815,652 10,156,155 RGD:1624291
G Chrm2 cholinergic receptor, muscarinic 2 JBrowse link 4 64,089,028 64,091,090 RGD:1624291
G Chrna3 cholinergic receptor nicotinic alpha 3 subunit JBrowse link 8 59,594,007 59,607,122 RGD:13702272
G Chrna4 cholinergic receptor nicotinic alpha 4 subunit JBrowse link 3 176,533,182 176,547,965 RGD:1600115
RGD:1624291
G Chrna5 cholinergic receptor nicotinic alpha 5 subunit JBrowse link 8 59,561,817 59,590,172 RGD:1600115
RGD:1624291
G Chrna6 cholinergic receptor nicotinic alpha 6 subunit JBrowse link 16 68,860,018 68,866,718 RGD:1600115
RGD:1624291
G Chrna7 cholinergic receptor nicotinic alpha 7 subunit JBrowse link 1 123,897,341 124,039,263 RGD:13702307
G Chrnb2 cholinergic receptor nicotinic beta 2 subunit JBrowse link 2 189,088,570 189,096,785 RGD:1624291
G Chrnb3 cholinergic receptor nicotinic beta 3 subunit JBrowse link 16 68,876,442 68,913,628 RGD:1624291
G Cspg5 chondroitin sulfate proteoglycan 5 JBrowse link 8 118,333,695 118,348,040 RGD:1600115
RGD:1624291
G Cyth1 cytohesin 1 JBrowse link 10 107,197,983 107,281,285 RGD:13702340
G Dgki diacylglycerol kinase, iota JBrowse link 4 64,365,115 64,831,473 RGD:1624291
G Drd1 dopamine receptor D1 JBrowse link 17 11,099,736 11,104,352 RGD:1600115
RGD:1624291
G Drd2 dopamine receptor D2 JBrowse link 8 53,678,777 53,743,643 RGD:1624291
G Drd4 dopamine receptor D4 JBrowse link 1 214,278,296 214,282,818 RGD:13702381
G Dtnbp1 dystrobrevin binding protein 1 JBrowse link 17 20,090,136 20,182,332 RGD:13792537
RGD:1624291
G Dvl1 dishevelled segment polarity protein 1 JBrowse link 5 173,295,948 173,308,014 RGD:1624291
G Fbxl20 F-box and leucine-rich repeat protein 20 JBrowse link 10 86,036,745 86,099,699 RGD:1600115
RGD:1624291
G Gipc1 GIPC PDZ domain containing family, member 1 JBrowse link 19 24,786,604 24,798,231 RGD:1624291
G Git1 GIT ArfGAP 1 JBrowse link 10 62,656,000 62,664,467 RGD:1600115
RGD:1624291
G Git2 GIT ArfGAP 2 JBrowse link 12 47,590,110 47,630,991 RGD:1624291
G Glra3 glycine receptor, alpha 3 JBrowse link 16 37,676,959 37,908,221 RGD:1624291
G Grin3a glutamate ionotropic receptor NMDA type subunit 3A JBrowse link 5 64,928,620 65,073,012 RGD:1624291
G Grm4 glutamate metabotropic receptor 4 JBrowse link 20 6,745,682 6,791,521 RGD:1624291
G Grm7 glutamate metabotropic receptor 7 JBrowse link 4 142,452,616 143,368,460 RGD:1624291
G Grm8 glutamate metabotropic receptor 8 JBrowse link 4 54,474,344 55,409,526 RGD:6484726
G Gsk3b glycogen synthase kinase 3 beta JBrowse link 11 65,060,884 65,208,842 RGD:1600115
RGD:1624291
G Htr1a 5-hydroxytryptamine receptor 1A JBrowse link 2 36,246,628 36,247,896 RGD:13702211
G Htr1b 5-hydroxytryptamine receptor 1B JBrowse link 8 89,113,984 89,130,830 RGD:13702319
G Htr2a 5-hydroxytryptamine receptor 2A JBrowse link 15 56,666,152 56,732,469 RGD:13702246
G Htr7 5-hydroxytryptamine receptor 7 JBrowse link 1 254,547,964 254,671,811 RGD:13702205
G Kcnh1 potassium voltage-gated channel subfamily H member 1 JBrowse link 13 110,920,712 111,232,291 RGD:1624291
G LOC100909840 profilin-2-like JBrowse link 2 148,044,714 148,050,464 RGD:1600115
G LOC100910506 peripheral plasma membrane protein CASK-like JBrowse link X 9,412,679 9,472,935 RGD:1600115
G LOC100911796 adenosine receptor A3-like JBrowse link 2 208,492,231 208,536,910 RGD:13702310
G LOC103694905 5-hydroxytryptamine receptor 7 RGD:13702205
G Lrrk2 leucine-rich repeat kinase 2 JBrowse link 7 132,857,311 133,018,549 RGD:1624291
G Myo6 myosin VI JBrowse link 8 87,583,649 87,731,271 RGD:1624291
G Ncs1 neuronal calcium sensor 1 JBrowse link 3 10,556,250 10,602,672 RGD:13702435
G Nr3c2 nuclear receptor subfamily 3, group C, member 2 JBrowse link 19 34,408,275 34,761,003 RGD:1624291
G Nrn1 neuritin 1 JBrowse link 17 27,925,054 28,002,946 RGD:1624291
G Nrxn3 neurexin 3 JBrowse link 6 112,133,204 114,069,589 RGD:1624291
G P2rx1 purinergic receptor P2X 1 JBrowse link 10 59,566,268 59,581,328 RGD:1581702
G P2rx2 purinergic receptor P2X 2 JBrowse link 12 52,397,666 52,401,005 RGD:1581702
G P2ry1 purinergic receptor P2Y1 JBrowse link 2 151,314,818 151,320,312 RGD:1581702
G P2ry2 purinergic receptor P2Y2 JBrowse link 1 166,031,228 166,045,423 RGD:1581702
G P2ry4 pyrimidinergic receptor P2Y4 JBrowse link X 70,421,599 70,447,109 RGD:1581702
G Pfn2 profilin 2 JBrowse link 2 147,953,858 147,959,692 RGD:1624291
RGD:1600115
G Ppfia2 PTPRF interacting protein alpha 2 JBrowse link 7 48,548,932 49,045,852 RGD:13702233
G Prepl prolyl endopeptidase-like JBrowse link 6 8,316,861 8,346,293 RGD:1600115
RGD:1624291
G Prkca protein kinase C, alpha JBrowse link 10 96,186,509 96,585,168 RGD:1624291
G Prkcb protein kinase C, beta JBrowse link 1 192,233,569 192,575,339 RGD:1600115
RGD:1624291
G Prkce protein kinase C, epsilon JBrowse link 6 9,483,400 9,973,396 RGD:11353024
G Prkcg protein kinase C, gamma JBrowse link 1 64,407,098 64,433,698 RGD:1624291
G Rab3a RAB3A, member RAS oncogene family JBrowse link 16 20,435,098 20,439,206 RGD:14390053
G Rab5a RAB5A, member RAS oncogene family JBrowse link 9 5,910 6,065 RGD:1624291
RGD:1600115
G Rab5al1 Rab5a, member RAS oncogene family-like 1 JBrowse link 14 72,889,022 72,891,156 RGD:1600115
G Rims1 regulating synaptic membrane exocytosis 1 JBrowse link 9 28,440,408 28,973,246 RGD:13792537
G Rims2 regulating synaptic membrane exocytosis 2 JBrowse link 7 78,091,998 78,594,164 RGD:13792537
G Rims3 regulating synaptic membrane exocytosis 3 JBrowse link 5 139,790,395 139,819,014 RGD:8554325
RGD:13792537
G Rims4 regulating synaptic membrane exocytosis 4 JBrowse link 3 160,237,659 160,301,792 RGD:8554325
G Snapin SNAP-associated protein JBrowse link 2 189,878,159 189,880,743 RGD:1624291
RGD:13792537
G Stxbp5 syntaxin binding protein 5 JBrowse link 1 3,858,917 4,011,684 RGD:1624291
G Stxbp5l syntaxin binding protein 5-like JBrowse link 11 66,246,624 66,566,331 RGD:1624291
G Syp synaptophysin JBrowse link X 15,694,699 15,709,244 RGD:1600115
RGD:1624291
G Syt1 synaptotagmin 1 JBrowse link 7 50,084,063 50,638,996 RGD:14390053
G Vps18 VPS18 core subunit of CORVET and HOPS complexes JBrowse link 3 111,097,352 111,108,206 RGD:1624291
G Wnt7a Wnt family member 7A JBrowse link 4 122,994,425 123,040,609 RGD:1624291
regulation of synaptic vesicle fusion to presynaptic active zone membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cplx1 complexin 1 JBrowse link 14 2,194,895 2,226,610 RGD:1624291
G Cplx2 complexin 2 JBrowse link 17 10,756,871 10,828,811 RGD:1624291
G Cplx3 complexin 3 JBrowse link 8 62,379,502 62,386,264 RGD:1624291
G Grik5 glutamate ionotropic receptor kainate type subunit 5 JBrowse link 1 81,885,516 81,946,731 RGD:1624291
G Rab3a RAB3A, member RAS oncogene family JBrowse link 16 20,435,098 20,439,206 RGD:1600115
RGD:1624291
RGD:13792537
G Vamp1 vesicle-associated membrane protein 1 JBrowse link 4 157,726,941 157,733,644 RGD:1600115
regulation of synaptic vesicle priming term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Napa NSF attachment protein alpha JBrowse link 1 77,994,227 78,012,846 RGD:1624291
RGD:13792537
G Napb NSF attachment protein beta JBrowse link 3 143,017,571 143,063,904 RGD:1624291
RGD:13792537
RGD:1600115
G Rab3a RAB3A, member RAS oncogene family JBrowse link 16 20,435,098 20,439,206 RGD:14390056
G Stx1a syntaxin 1A JBrowse link 12 24,682,050 24,710,002 RGD:1624291
G Stx1b syntaxin 1B JBrowse link 1 199,251,842 199,270,465 RGD:1624291
RGD:1600115
G Stxbp1 syntaxin binding protein 1 JBrowse link 3 11,823,779 11,885,479 RGD:2311128
RGD:14390056
G Stxbp5 syntaxin binding protein 5 JBrowse link 1 3,858,917 4,011,684 RGD:1624291
G Unc13a unc-13 homolog A JBrowse link 16 20,056,398 20,103,951 RGD:14390056
regulation of synaptic vesicle recycling term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fgf14 fibroblast growth factor 14 JBrowse link 15 110,382,274 111,077,027 RGD:10047342
G Vamp2 vesicle-associated membrane protein 2 JBrowse link 10 55,675,171 55,679,405 RGD:13506237
spontaneous exocytosis of neurotransmitter term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Prkaca protein kinase cAMP-activated catalytic subunit alpha JBrowse link 19 25,095,089 25,118,869 RGD:10047304
G Syt12 synaptotagmin 12 JBrowse link 1 219,690,013 219,719,359 RGD:10047304
synaptic vesicle budding from endosome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ap1s2 adaptor related protein complex 1 subunit sigma 2 JBrowse link X 32,329,883 32,376,301 RGD:1624291
G Ap3b1 adaptor related protein complex 3 subunit beta 1 JBrowse link 2 24,022,815 24,227,522 RGD:1624291
G Ap3d1 adaptor related protein complex 3 subunit delta 1 JBrowse link 7 11,838,639 11,873,992 RGD:12050120
RGD:13792537
RGD:1624291
G Btbd8 BTB domain containing 8 JBrowse link 14 3,282,422 3,351,740 RGD:1624291
synaptic vesicle budding from presynaptic endocytic zone membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dnm1 dynamin 1 JBrowse link 3 11,338,081 11,382,043 RGD:1624291
RGD:13792537
G Dnm2 dynamin 2 JBrowse link 8 22,458,869 22,540,649 RGD:13792537
G Dnm3 dynamin 3 JBrowse link 13 79,906,711 80,379,967 RGD:1624291
RGD:13792537
G Eps15 epidermal growth factor receptor pathway substrate 15 JBrowse link 5 128,923,809 129,022,268 RGD:9685531
G Mx1 myxovirus (influenza virus) resistance 1 JBrowse link 11 37,891,150 37,916,775 RGD:13792537
G Mx2 MX dynamin like GTPase 2 JBrowse link 11 38,035,306 38,066,185 RGD:13792537
G Picalm phosphatidylinositol binding clathrin assembly protein JBrowse link 1 154,377,229 154,458,966 RGD:13792537
G Snap91 synaptosome associated protein 91 JBrowse link 8 94,447,558 94,564,772 RGD:1624291
RGD:13792537
synaptic vesicle clustering term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ctnnb1 catenin beta 1 JBrowse link 8 129,601,511 129,628,378 RGD:1600115
RGD:1624291
G Nlgn1 neuroligin 1 JBrowse link 2 111,057,291 111,973,681 RGD:8554760
RGD:1624291
RGD:1600115
RGD:10047242
G Nrxn1 neurexin 1 JBrowse link 6 13,886,757 15,191,660 RGD:1624291
RGD:1600115
G Pclo piccolo (presynaptic cytomatrix protein) JBrowse link 4 16,454,904 17,058,921 RGD:1624291
G Rab3a RAB3A, member RAS oncogene family JBrowse link 16 20,435,098 20,439,206 RGD:1624291
G Syn1 synapsin I JBrowse link X 1,321,315 1,379,202 RGD:1624291
G Syn2 synapsin II JBrowse link 4 147,037,179 147,195,096 RGD:1600115
RGD:1624291
G Syn3 synapsin III JBrowse link 7 23,403,896 23,808,602 RGD:1600115
RGD:1624291
G Syndig1 synapse differentiation inducing 1 JBrowse link 3 145,031,427 145,199,273 RGD:8554654
synaptic vesicle coating term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cltb clathrin, light chain B JBrowse link 17 10,537,348 10,554,999 RGD:70686
synaptic vesicle cycle term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Brsk1 BR serine/threonine kinase 1 JBrowse link 1 72,701,281 72,727,061 RGD:1624291
G Stxbp5 syntaxin binding protein 5 JBrowse link 1 3,858,917 4,011,684 RGD:13702312
G Syn1 synapsin I JBrowse link X 1,321,315 1,379,202 RGD:1624291
G Syn2 synapsin II JBrowse link 4 147,037,179 147,195,096 RGD:1624291
G Syn3 synapsin III JBrowse link 7 23,403,896 23,808,602 RGD:1624291
synaptic vesicle docking term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ctbp2 C-terminal binding protein 2 JBrowse link 1 205,001,354 205,030,565 RGD:1624291
G Ppfia3 PTPRF interacting protein alpha 3 JBrowse link 1 101,328,547 101,357,391 RGD:1600115
RGD:1624291
G Rims1 regulating synaptic membrane exocytosis 1 JBrowse link 9 28,440,408 28,973,246 RGD:1624291
G Rims2 regulating synaptic membrane exocytosis 2 JBrowse link 7 78,091,998 78,594,164 RGD:1624291
G Sptbn2 spectrin, beta, non-erythrocytic 2 JBrowse link 1 219,964,429 220,006,811 RGD:70020
G Stx1a syntaxin 1A JBrowse link 12 24,682,050 24,710,002 RGD:8553325
G Stx1b syntaxin 1B JBrowse link 1 199,251,842 199,270,465 RGD:1600115
RGD:1624291
G Stx3 syntaxin 3 JBrowse link 1 228,137,781 228,195,004 RGD:68313
G Stx4 syntaxin 4 JBrowse link 1 199,287,384 199,295,606 RGD:68313
G Syde1 synapse defective Rho GTPase homolog 1 JBrowse link 7 14,037,646 14,043,632 RGD:1624291
G Unc13a unc-13 homolog A JBrowse link 16 20,056,398 20,103,951 RGD:1624291
RGD:13792537
RGD:1600115
G Unc13b unc-13 homolog B JBrowse link 5 58,505,449 58,714,396 RGD:1624291
RGD:13792537
G Unc13c unc-13 homolog C JBrowse link 8 80,202,736 80,656,363 RGD:13792537
G Vamp2 vesicle-associated membrane protein 2 JBrowse link 10 55,675,171 55,679,405 RGD:1624291
synaptic vesicle endocytosis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Actb actin, beta JBrowse link 12 13,715,843 13,718,813 RGD:1600115
RGD:1624291
G Actg1 actin, gamma 1 JBrowse link 10 109,518,429 109,521,288 RGD:1624291
G Amph amphiphysin JBrowse link 17 48,304,324 48,562,838 RGD:1624291
RGD:13792537
G Ap2b1 adaptor related protein complex 2 subunit beta 1 JBrowse link 10 70,516,462 70,621,973 RGD:1624291
G Ap2m1 adaptor related protein complex 2 subunit mu 1 JBrowse link 11 84,041,184 84,047,542 RGD:12050109
G Arf6 ADP-ribosylation factor 6 JBrowse link 6 91,697,109 91,698,257 RGD:11556875
G Bin1 bridging integrator 1 JBrowse link 18 25,163,575 25,222,139 RGD:631926
G Btbd8 BTB domain containing 8 JBrowse link 14 3,282,422 3,351,740 RGD:1624291
G Canx calnexin JBrowse link 10 35,800,942 35,833,939 RGD:1600115
RGD:1624291
G Cd24 CD24 molecule JBrowse link 20 48,335,540 48,340,847 RGD:1624291
G Cdk5 cyclin-dependent kinase 5 JBrowse link 4 7,282,945 7,287,427 RGD:1358501
G Cel carboxyl ester lipase JBrowse link 3 7,134,021 7,141,522 RGD:13792537
G Cltc clathrin heavy chain JBrowse link 10 74,014,560 74,070,578 RGD:13702168
G Dennd1a DENN domain containing 1A JBrowse link 3 22,061,120 22,501,502 RGD:1624291
G Dnm1 dynamin 1 JBrowse link 3 11,338,081 11,382,043 RGD:1624291
G Dnm1l dynamin 1-like JBrowse link 11 88,830,968 88,882,271 RGD:12793033
G Dnm2 dynamin 2 JBrowse link 8 22,458,869 22,540,649 RGD:1624291
G Dnm3 dynamin 3 JBrowse link 13 79,906,711 80,379,967 RGD:1624291
G Fcho2 FCH and mu domain containing endocytic adaptor 2 JBrowse link 2 28,927,918 29,029,271 RGD:1624291
RGD:13792537
RGD:12050101
G Grn granulin precursor JBrowse link 10 90,377,103 90,383,207 RGD:5509044
G Itsn1 intersectin 1 JBrowse link 11 31,943,119 32,069,249 RGD:1624291
G LOC100910792 amphiphysin-like JBrowse link 17 47,716,143 47,817,243 RGD:13792537
G Nlgn1 neuroligin 1 JBrowse link 2 111,057,291 111,973,681 RGD:13792537
G Nlgn2 neuroligin 2 JBrowse link 10 56,431,586 56,444,847 RGD:13792537
G Nlgn3 neuroligin 3 JBrowse link X 71,199,390 71,227,460 RGD:13792537
G Ophn1 oligophrenin 1 JBrowse link X 68,185,865 68,579,518 RGD:1624291
RGD:13792537
G Pacsin1 protein kinase C and casein kinase substrate in neurons 1 JBrowse link 20 7,241,248 7,286,702 RGD:1600115
RGD:1624291
G Picalm phosphatidylinositol binding clathrin assembly protein JBrowse link 1 154,377,229 154,458,966 RGD:13506237
RGD:13792537
G Rab27b RAB27B, member RAS oncogene family JBrowse link 18 68,486,006 68,644,595 RGD:13432355
G RGD1307100 similar to RIKEN cDNA D630029K19 JBrowse link 2 123,555,742 123,766,675 RGD:13792537
G Scrib scribble planar cell polarity protein JBrowse link 7 117,105,810 117,128,802 RGD:1624291
G Sh3gl2 SH3 domain containing GRB2 like 2, endophilin A1 JBrowse link 5 103,479,767 103,654,507 RGD:1624291
RGD:13702445
G Snap91 synaptosome associated protein 91 JBrowse link 8 94,447,558 94,564,772 RGD:13506237
RGD:13792537
G Snca synuclein alpha JBrowse link 4 90,782,412 90,883,236 RGD:1624291
G Sncb synuclein, beta JBrowse link 17 10,384,472 10,392,776 RGD:1600115
RGD:1624291
G Ston1 stonin 1 JBrowse link 6 12,332,465 12,379,783 RGD:13792537
G Ston2 stonin 2 JBrowse link 6 115,398,586 115,547,552 RGD:12050122
RGD:13792537
RGD:1600115
RGD:1624291
G Stx1a syntaxin 1A JBrowse link 12 24,682,050 24,710,002 RGD:1624291
G Synj1 synaptojanin 1 JBrowse link 11 31,105,784 31,181,573 RGD:1624291
RGD:13792537
RGD:1600115
G Synj2 synaptojanin 2 JBrowse link 1 46,835,922 46,932,544 RGD:13792537
G Syp synaptophysin JBrowse link X 15,694,699 15,709,244 RGD:1600115
RGD:1624291
G Syt1 synaptotagmin 1 JBrowse link 7 50,084,063 50,638,996 RGD:13792537
G Syt2 synaptotagmin 2 JBrowse link 13 51,569,248 51,577,824 RGD:13792537
G Syt5 synaptotagmin 5 JBrowse link 1 72,859,806 72,867,934 RGD:13792537
G Syt8 synaptotagmin 8 JBrowse link 1 215,605,408 215,607,602 RGD:13792537
G Tbc1d24 TBC1 domain family, member 24 JBrowse link 10 13,551,100 13,576,739 RGD:1624291
G Vamp2 vesicle-associated membrane protein 2 JBrowse link 10 55,675,171 55,679,405 RGD:1600115
RGD:1624291
synaptic vesicle exocytosis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Apba1 amyloid beta precursor protein binding family A member 1 JBrowse link 1 241,594,565 241,796,512 RGD:727250
G Apba2 amyloid beta precursor protein binding family A member 2 JBrowse link 1 125,367,273 125,547,741 RGD:727250
G Cplx1 complexin 1 JBrowse link 14 2,194,895 2,226,610 RGD:727333
RGD:13792537
RGD:1624291
G Cplx2 complexin 2 JBrowse link 17 10,756,871 10,828,811 RGD:727333
RGD:13792537
G Cplx3 complexin 3 JBrowse link 8 62,379,502 62,386,264 RGD:1624291
RGD:13792537
G Cplx4 complexin 4 JBrowse link 18 61,657,216 61,672,641 RGD:13792537
G Doc2a double C2 domain alpha JBrowse link 1 198,282,828 198,288,611 RGD:1357914
G Otof otoferlin JBrowse link 6 27,328,343 27,424,864 RGD:1600115
RGD:1624291
G P2rx7 purinergic receptor P2X 7 JBrowse link 12 39,353,613 39,396,042 RGD:1624291
G Ppfia3 PTPRF interacting protein alpha 3 JBrowse link 1 101,328,547 101,357,391 RGD:1624291
G Rab3a RAB3A, member RAS oncogene family JBrowse link 16 20,435,098 20,439,206 RGD:8693376
RGD:1624291
G Snap25 synaptosome associated protein 25 JBrowse link 3 129,697,408 129,788,417 RGD:13702457
RGD:1624291
G Snapin SNAP-associated protein JBrowse link 2 189,878,159 189,880,743 RGD:1624291
RGD:13792537
G Snca synuclein alpha JBrowse link 4 90,782,412 90,883,236 RGD:1624291
G Sptbn2 spectrin, beta, non-erythrocytic 2 JBrowse link 1 219,964,429 220,006,811 RGD:8553838
G Stx1a syntaxin 1A JBrowse link 12 24,682,050 24,710,002 RGD:13702440
RGD:1624291
G Stx1b syntaxin 1B JBrowse link 1 199,251,842 199,270,465 RGD:1624291
G Stx7 syntaxin 7 JBrowse link 1 22,241,655 22,281,850 RGD:634188
G Stxbp2 syntaxin binding protein 2 JBrowse link 12 2,180,101 2,191,863 RGD:730001
G Syt1 synaptotagmin 1 JBrowse link 7 50,084,063 50,638,996 RGD:729959
RGD:13792537
RGD:1624291
G Syt10 synaptotagmin 10 JBrowse link 7 130,769,039 130,827,030 RGD:1624291
RGD:1600115
G Syt2 synaptotagmin 2 JBrowse link 13 51,569,248 51,577,824 RGD:729949
RGD:13792537
G Syt3 synaptotagmin 3 JBrowse link 1 100,379,236 100,407,862 RGD:61762
G Syt5 synaptotagmin 5 JBrowse link 1 72,859,806 72,867,934 RGD:13792537
G Syt8 synaptotagmin 8 JBrowse link 1 215,605,408 215,607,602 RGD:13792537
G Trim9 tripartite motif-containing 9 JBrowse link 6 92,660,026 92,760,036 RGD:631246
G Unc13a unc-13 homolog A JBrowse link 16 20,056,398 20,103,951 RGD:1624291
G Unc13b unc-13 homolog B JBrowse link 5 58,505,449 58,714,396 RGD:1624291
G Unc13c unc-13 homolog C JBrowse link 8 80,202,736 80,656,363 RGD:1600115
RGD:1624291
G Vamp2 vesicle-associated membrane protein 2 JBrowse link 10 55,675,171 55,679,405 RGD:13702243
RGD:1624291
RGD:1600115
synaptic vesicle fusion to presynaptic active zone membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AABR07053516.1 RGD:13792537
G LOC103690878 syntaxin-3-like JBrowse link X 79,742,224 79,743,117 RGD:13792537
G Prrt2 proline-rich transmembrane protein 2 JBrowse link 1 198,451,042 198,454,998 RGD:1600115
RGD:1624291
G Snap23 synaptosome associated protein 23 JBrowse link 3 112,333,972 112,362,960 RGD:13792537
G Snap25 synaptosome associated protein 25 JBrowse link 3 129,697,408 129,788,417 RGD:13792537
G Snap29 synaptosome associated protein 29 JBrowse link 11 87,827,633 87,858,107 RGD:13792537
G Snap47 synaptosome associated protein 47 JBrowse link 10 45,757,196 45,798,734 RGD:13792537
G Snapin SNAP-associated protein JBrowse link 2 189,878,159 189,880,743 RGD:1624291
G Stx11 syntaxin 11 JBrowse link 1 7,039,160 7,064,870 RGD:13792537
G Stx1a syntaxin 1A JBrowse link 12 24,682,050 24,710,002 RGD:11535099
RGD:13792537
G Stx1b syntaxin 1B JBrowse link 1 199,251,842 199,270,465 RGD:13792537
RGD:1624291
G Stx2 syntaxin 2 JBrowse link 12 31,324,203 31,360,249 RGD:13792537
G Stx3 syntaxin 3 JBrowse link 1 228,137,781 228,195,004 RGD:13792537
G Stx4 syntaxin 4 JBrowse link 1 199,287,384 199,295,606 RGD:13792537
synaptic vesicle lumen acidification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atp6v1b1 ATPase H+ transporting V1 subunit B1 JBrowse link 4 115,417,100 115,435,754 RGD:1600115
G Clcn3 chloride voltage-gated channel 3 JBrowse link 16 32,448,821 32,520,649 RGD:1624291
G Slc17a7 solute carrier family 17 member 7 JBrowse link 1 101,161,265 101,172,292 RGD:1624291
synaptic vesicle priming term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AABR07053516.1 RGD:13792537
G Cadps calcium dependent secretion activator JBrowse link 15 15,275,489 15,690,575 RGD:1600115
RGD:1624291
G Cadps2 calcium dependent secretion activator 2 JBrowse link 4 50,326,447 50,861,161 RGD:1624291
G Erc1 ELKS/RAB6-interacting/CAST family member 1 JBrowse link 4 152,087,393 152,380,023 RGD:1624291
G Erc2 ELKS/RAB6-interacting/CAST family member 2 JBrowse link 16 3,258,580 4,283,592 RGD:1624291
G Napa NSF attachment protein alpha JBrowse link 1 77,994,227 78,012,846 RGD:1624291
G Otof otoferlin JBrowse link 6 27,328,343 27,424,864 RGD:1624291
RGD:13792537
G Rims1 regulating synaptic membrane exocytosis 1 JBrowse link 9 28,440,408 28,973,246 RGD:1624291
G Rims2 regulating synaptic membrane exocytosis 2 JBrowse link 7 78,091,998 78,594,164 RGD:1624291
G Snap23 synaptosome associated protein 23 JBrowse link 3 112,333,972 112,362,960 RGD:13792537
G Snap25 synaptosome associated protein 25 JBrowse link 3 129,697,408 129,788,417 RGD:13792537
G Snap29 synaptosome associated protein 29 JBrowse link 11 87,827,633 87,858,107 RGD:13792537
G Snap47 synaptosome associated protein 47 JBrowse link 10 45,757,196 45,798,734 RGD:13792537
G Snca synuclein alpha JBrowse link 4 90,782,412 90,883,236 RGD:1624291
G Stxbp1 syntaxin binding protein 1 JBrowse link 3 11,823,779 11,885,479 RGD:1624291
G Sv2a synaptic vesicle glycoprotein 2a JBrowse link 2 198,321,100 198,336,889 RGD:1624291
G Synj1 synaptojanin 1 JBrowse link 11 31,105,784 31,181,573 RGD:1624291
G Unc13a unc-13 homolog A JBrowse link 16 20,056,398 20,103,951 RGD:5686389
RGD:13792537
RGD:1624291
RGD:1600115
G Unc13b unc-13 homolog B JBrowse link 5 58,505,449 58,714,396 RGD:11535109
RGD:13792537
RGD:1624291
RGD:1600115
G Unc13c unc-13 homolog C JBrowse link 8 80,202,736 80,656,363 RGD:11535109
RGD:13792537
G Vamp1 vesicle-associated membrane protein 1 JBrowse link 4 157,726,941 157,733,644 RGD:1600115
synaptic vesicle recycling term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ap1s2 adaptor related protein complex 1 subunit sigma 2 JBrowse link X 32,329,883 32,376,301 RGD:1624291
G Rab3a RAB3A, member RAS oncogene family JBrowse link 16 20,435,098 20,439,206 RGD:8693376
G Rab5a RAB5A, member RAS oncogene family JBrowse link 9 5,910 6,065 RGD:1624291
G Syt7 synaptotagmin 7 JBrowse link 1 226,435,816 226,498,008 RGD:1624291
RGD:1600115
synaptic vesicle recycling via endosome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bcl2l1 Bcl2-like 1 JBrowse link 3 148,259,594 148,314,191 RGD:12793033
G Btbd8 BTB domain containing 8 JBrowse link 14 3,282,422 3,351,740 RGD:1600115
RGD:1624291
G Dnm1l dynamin 1-like JBrowse link 11 88,830,968 88,882,271 RGD:12793033
synaptic vesicle targeting term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nlgn1 neuroligin 1 JBrowse link 2 111,057,291 111,973,681 RGD:1624291
RGD:1600115
G Pclo piccolo (presynaptic cytomatrix protein) JBrowse link 4 16,454,904 17,058,921 RGD:69383
G Psen1 presenilin 1 JBrowse link 6 107,169,514 107,221,000 RGD:1624291
G Scrib scribble planar cell polarity protein JBrowse link 7 117,105,810 117,128,802 RGD:1624291
synaptic vesicle uncoating term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dnajc6 DnaJ heat shock protein family (Hsp40) member C6 JBrowse link 5 120,330,372 120,492,515 RGD:13792537
RGD:1624291
G Hspa8 heat shock protein family A (Hsp70) member 8 JBrowse link 8 44,989,401 44,993,261 RGD:10059325
G Sh3gl1 SH3 domain containing GRB2 like 1, endophilin A2 JBrowse link 9 11,031,847 11,055,285 RGD:1624291
G Sh3gl2 SH3 domain containing GRB2 like 2, endophilin A1 JBrowse link 5 103,479,767 103,654,507 RGD:1624291
G Sh3gl3 SH3 domain containing GRB2 like 3, endophilin A3 JBrowse link 1 144,069,641 144,200,402 RGD:1624291
G Synj1 synaptojanin 1 JBrowse link 11 31,105,784 31,181,573 RGD:1624291

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19858
    cellular process 18618
      vesicle-mediated transport 1651
        vesicle-mediated transport in synapse 281
          endocytosed synaptic vesicle processing via endosome 0
          postsynaptic dense core vesicle exocytosis + 0
          postsynaptic endocytosis + 34
          presynaptic endocytosis + 76
          synaptic vesicle budding from endosome 4
          synaptic vesicle cycle + 253
          synaptic vesicle exocytosis + 159
Path 2
Term Annotations click to browse term
  biological_process 19858
    localization 6457
      establishment of localization 4905
        transport 4762
          vesicle-mediated transport 1651
            vesicle-mediated transport in synapse 281
              endocytosed synaptic vesicle processing via endosome 0
              postsynaptic dense core vesicle exocytosis + 0
              postsynaptic endocytosis + 34
              presynaptic endocytosis + 76
              synaptic vesicle budding from endosome 4
              synaptic vesicle cycle + 253
              synaptic vesicle exocytosis + 159
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.