ONTOLOGY REPORT - ANNOTATIONS


Term:presynapse organization
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Accession:GO:0099172 term browser browse the term
Definition:A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a presynapse.
Synonyms:exact_synonym: presynapse development;   presynapse organisation
 related_synonym: presynapse morphogenesis;   presynapse organization and biogenesis


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presynapse organization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G C5ar1 complement C5a receptor 1 JBrowse link 1 78,186,777 78,195,132 RGD:1624291
G Ppfia2 PTPRF interacting protein alpha 2 JBrowse link 7 48,548,932 49,045,852 RGD:1600115
negative regulation of presynapse assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dkk1 dickkopf WNT signaling pathway inhibitor 1 JBrowse link 1 248,952,896 248,956,579 RGD:1624291
neurexin clustering involved in presynaptic membrane assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nlgn1 neuroligin 1 JBrowse link 2 111,057,291 111,973,681 RGD:1624291
RGD:1600115
positive regulation of presynaptic active zone assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nlgn1 neuroligin 1 JBrowse link 2 111,057,291 111,973,681 RGD:8554205
G Nrxn1 neurexin 1 JBrowse link 6 13,886,757 15,191,660 RGD:8554205
presynapse assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cadm1 cell adhesion molecule 1 JBrowse link 8 51,858,906 52,200,591 RGD:1624291
G Cntn5 contactin 5 JBrowse link 8 7,812,371 9,033,962 RGD:1600115
RGD:1624291
G Dvl1 dishevelled segment polarity protein 1 JBrowse link 5 173,295,948 173,308,014 RGD:1600115
RGD:1624291
G Efnb1 ephrin B1 JBrowse link X 68,891,227 68,904,034 RGD:13702172
G Efnb2 ephrin B2 JBrowse link 16 86,631,151 86,672,050 RGD:13702172
G Fzd5 frizzled class receptor 5 JBrowse link 9 71,443,784 71,445,541 RGD:13702329
G Lrrtm3 leucine rich repeat transmembrane neuronal 3 JBrowse link 20 25,990,304 26,163,656 RGD:1600115
RGD:1624291
G Nrxn1 neurexin 1 JBrowse link 6 13,886,757 15,191,660 RGD:13702298
G Sdcbp syndecan binding protein JBrowse link 5 19,471,664 19,498,499 RGD:13702172
presynaptic actin cytoskeleton organization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Arhgef7 Rho guanine nucleotide exchange factor 7 JBrowse link 16 83,006,732 83,117,065 RGD:13702413
presynaptic active zone assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bsn bassoon (presynaptic cytomatrix protein) JBrowse link 8 116,873,721 116,965,396 RGD:14390063
G Pcdh17 protocadherin 17 JBrowse link 15 67,555,835 67,647,990 RGD:1624291
RGD:1600115
G Pclo piccolo (presynaptic cytomatrix protein) JBrowse link 4 16,454,904 17,058,921 RGD:14390063
presynaptic membrane assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cel carboxyl ester lipase JBrowse link 3 7,134,021 7,141,522 RGD:13792537
G Il1rapl1 interleukin 1 receptor accessory protein-like 1 JBrowse link X 55,439,388 57,004,865 RGD:1624291
G Lrp4 LDL receptor related protein 4 JBrowse link 3 80,362,643 80,416,684 RGD:1624291
RGD:1600115
G Nlgn1 neuroligin 1 JBrowse link 2 111,057,291 111,973,681 RGD:8554205
RGD:13792537
RGD:1624291
RGD:8554379
G Nlgn2 neuroligin 2 JBrowse link 10 56,431,586 56,444,847 RGD:8554205
RGD:13792537
RGD:1624291
RGD:1600115
G Nlgn3 neuroligin 3 JBrowse link X 71,199,390 71,227,460 RGD:8554205
RGD:13792537
G Nrxn1 neurexin 1 JBrowse link 6 13,886,757 15,191,660 RGD:1624291
RGD:1600115
G Pten phosphatase and tensin homolog JBrowse link 1 251,421,814 251,487,634 RGD:1624291
RGD:1600115
G Ptprd protein tyrosine phosphatase, receptor type, D JBrowse link 5 92,862,229 93,514,071 RGD:1624291
regulation of presynapse assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G App amyloid beta precursor protein JBrowse link 11 24,425,013 24,641,872 RGD:1600115
RGD:1624291
G Arf6 ADP-ribosylation factor 6 JBrowse link 6 91,697,109 91,698,257 RGD:8554141
G Cbln1 cerebellin 1 precursor JBrowse link 19 20,607,507 20,611,316 RGD:1600115
RGD:1624291
G Cbln2 cerebellin 2 precursor JBrowse link 18 83,775,568 83,783,841 RGD:1600115
RGD:1624291
G Clstn3 calsyntenin 3 JBrowse link 4 157,044,736 157,078,013 RGD:1600115
RGD:1624291
G Eif4g1 eukaryotic translation initiation factor 4 gamma, 1 JBrowse link 11 83,907,659 83,927,683 RGD:1624291
RGD:1600115
G Farp1 FERM, ARH/RhoGEF and pleckstrin domain protein 1 JBrowse link 15 106,375,298 106,625,837 RGD:8554251
G Fzd1 frizzled class receptor 1 JBrowse link 4 26,470,864 26,475,262 RGD:1600115
RGD:1624291
G Gpc4 glypican 4 JBrowse link X 139,354,325 139,464,876 RGD:13702303
RGD:13792537
G Grid2 glutamate ionotropic receptor delta type subunit 2 JBrowse link 4 94,068,112 95,476,864 RGD:13702347
RGD:13702257
G Il1rap interleukin 1 receptor accessory protein JBrowse link 11 77,456,648 77,593,208 RGD:1624291
RGD:1600115
G Il1rapl1 interleukin 1 receptor accessory protein-like 1 JBrowse link X 55,439,388 57,004,865 RGD:1600115
RGD:1624291
G Il1rapl2 interleukin 1 receptor accessory protein-like 2 JBrowse link X 108,287,034 109,851,075 RGD:1600115
RGD:1624291
G Lrfn3 leucine rich repeat and fibronectin type III domain containing 3 JBrowse link 1 88,819,439 88,827,002 RGD:13702184
RGD:13792537
G Lrfn4 leucine rich repeat and fibronectin type III domain containing 4 JBrowse link 1 219,850,037 219,855,771 RGD:1624291
RGD:13792537
G Lrfn5 leucine rich repeat and fibronectin type III domain containing 5 JBrowse link 6 83,082,593 83,438,601 RGD:1624291
RGD:13792537
G Lrrc4b leucine rich repeat containing 4B JBrowse link 1 100,434,418 100,468,914 RGD:13702321
G LRRTM1 leucine rich repeat transmembrane neuronal 1 JBrowse link 4 108,300,927 108,316,373 RGD:8554788
G Mdga1 MAM domain containing glycosylphosphatidylinositol anchor 1 JBrowse link 20 8,515,142 8,574,632 RGD:1600115
RGD:1624291
G Mdga2 MAM domain containing glycosylphosphatidylinositol anchor 2 JBrowse link 6 88,442,620 89,292,454 RGD:1624291
G Nlgn2 neuroligin 2 JBrowse link 10 56,431,586 56,444,847 RGD:13702379
G Nrxn1 neurexin 1 JBrowse link 6 13,886,757 15,191,660 RGD:1624291
G Ntng2 netrin G2 JBrowse link 3 7,742,511 7,800,834 RGD:1600115
RGD:1624291
G Ntrk3 neurotrophic receptor tyrosine kinase 3 JBrowse link 1 139,890,537 140,262,503 RGD:13702219
G Ptprd protein tyrosine phosphatase, receptor type, D JBrowse link 5 92,862,229 93,514,071 RGD:1600115
RGD:1624291
G Ptprs protein tyrosine phosphatase, receptor type, S JBrowse link 9 10,585,360 10,646,205 RGD:13702219
G Slitrk1 SLIT and NTRK-like family, member 1 JBrowse link 15 93,303,382 93,307,420 RGD:1600115
RGD:1624291
G Slitrk2 SLIT and NTRK-like family, member 2 JBrowse link X 151,099,388 151,111,816 RGD:1624291
G Slitrk3 SLIT and NTRK-like family, member 3 JBrowse link 2 170,446,582 170,461,513 RGD:1600115
RGD:1624291
G Snca synuclein alpha JBrowse link 4 90,782,412 90,883,236 RGD:1624291
RGD:1600115
G Wnt3a Wnt family member 3A JBrowse link 10 45,598,898 45,643,151 RGD:1600115
RGD:1624291
G Wnt7a Wnt family member 7A JBrowse link 4 122,994,425 123,040,609 RGD:1600115
RGD:1624291
regulation of presynapse organization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nlgn1 neuroligin 1 JBrowse link 2 111,057,291 111,973,681 RGD:13702379
regulation of terminal button organization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nlgn3 neuroligin 3 JBrowse link X 71,199,390 71,227,460 RGD:1624291
RGD:8553412
RGD:1600115
G Picalm phosphatidylinositol binding clathrin assembly protein JBrowse link 1 154,377,229 154,458,966 RGD:13506174
G Snap91 synaptosome associated protein 91 JBrowse link 8 94,447,558 94,564,772 RGD:13506174
G Vps35 VPS35 retromer complex component JBrowse link 19 27,464,937 27,500,636 RGD:1624291
RGD:1600115
terminal button organization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Chd4 chromodomain helicase DNA binding protein 4 JBrowse link 4 157,612,531 157,645,660 RGD:9587770
G Nlgn1 neuroligin 1 JBrowse link 2 111,057,291 111,973,681 RGD:1624291
RGD:8554760
G Nlgn2 neuroligin 2 JBrowse link 10 56,431,586 56,444,847 RGD:8554527
G Snapin SNAP-associated protein JBrowse link 2 189,878,159 189,880,743 RGD:1624291
RGD:1600115

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17928
    cellular process 16079
      cellular component organization 6055
        presynapse organization 57
          presynapse assembly + 49
          presynaptic cytoskeleton organization + 1
          regulation of presynapse organization + 38
          terminal button organization + 8
Path 2
Term Annotations click to browse term
  biological_process 17928
    cellular process 16079
      cellular component organization 6055
        synapse organization 475
          presynapse organization 57
            presynapse assembly + 49
            presynaptic cytoskeleton organization + 1
            regulation of presynapse organization + 38
            terminal button organization + 8
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.