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ONTOLOGY REPORT - ANNOTATIONS


Term:secretory vesicle
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Accession:GO:0099503 term browser browse the term
Definition:A cytoplasmic, membrane bound vesicle that is capable of fusing to the plasma membrane to release its contents into the extracellular space.


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secretory vesicle term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dnm1l dynamin 1-like JBrowse link 11 88,830,968 88,882,271 RGD:11535088
G Dynlt1 dynein light chain Tctex-type 1 JBrowse link 1 47,206,892 47,213,785 RGD:1624291
G Map6 microtubule-associated protein 6 JBrowse link 1 164,225,776 164,292,094 RGD:13441203
G Rab3d RAB3D, member RAS oncogene family JBrowse link 8 22,920,238 22,929,368 RGD:1624291
acrosomal lumen term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Spata31a5 SPATA31 subfamily A member 5 JBrowse link 17 2,417,700 2,423,486 RGD:1600115
G Zp3r zona pellucida 3 receptor JBrowse link 13 47,286,375 47,331,213 RGD:1600115
acrosomal matrix term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acr acrosin JBrowse link 7 130,541,320 130,548,356 RGD:8553887
G C4bpa complement component 4 binding protein, alpha JBrowse link 13 47,342,090 47,377,580 RGD:1624291
G Cylc1 cylicin 1 JBrowse link X 82,217,133 82,302,106 RGD:1624291
RGD:13792537
G Dld dihydrolipoamide dehydrogenase JBrowse link 6 50,597,677 50,618,694 RGD:1624291
G Spaca3 sperm acrosome associated 3 JBrowse link 10 68,227,736 68,235,295 RGD:1624291
G Zp3r zona pellucida 3 receptor JBrowse link 13 47,286,375 47,331,213 RGD:1299568
acrosomal membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acrbp acrosin binding protein JBrowse link 4 157,563,990 157,577,045 RGD:1600115
RGD:1624291
G Bsg basigin (Ok blood group) JBrowse link 7 12,875,536 12,882,753 RGD:1624291
G Cav1 caveolin 1 JBrowse link 4 44,597,123 44,630,206 RGD:1624291
RGD:1600115
G Cav2 caveolin 2 JBrowse link 4 44,573,264 44,580,640 RGD:1624291
RGD:1600115
G Ccdc136 coiled-coil domain containing 136 JBrowse link 4 56,674,737 56,704,501 RGD:1624291
G Eqtn equatorin JBrowse link 5 113,852,191 113,881,142 RGD:1624291
RGD:13792537
G Flot2 flotillin 2 JBrowse link 10 65,304,901 65,329,332 RGD:1624291
G Hyal3 hyaluronidase 3 JBrowse link 8 116,336,512 116,342,147 RGD:1600115
RGD:1624291
G Ift88 intraflagellar transport 88 JBrowse link 15 37,690,417 37,786,855 RGD:1624291
G Izumo1 izumo sperm-egg fusion 1 JBrowse link 1 101,603,222 101,608,977 RGD:1600115
RGD:1624291
G Pcsk4 proprotein convertase subtilisin/kexin type 4 JBrowse link 7 12,247,498 12,255,721 RGD:1624291
RGD:1600115
G Pla1a phospholipase A1 member A JBrowse link 11 64,882,024 64,919,714 RGD:1624291
G Serpina5 serpin family A member 5 JBrowse link 6 127,753,152 127,772,403 RGD:1624291
G Slc2a3 solute carrier family 2 member 3 JBrowse link 4 155,549,991 155,626,018 RGD:1624291
G Spaca1 sperm acrosome associated 1 JBrowse link 5 49,424,064 49,439,180 RGD:1624291
RGD:13792537
G Spaca3 sperm acrosome associated 3 JBrowse link 10 68,227,736 68,235,295 RGD:1624291
G Spata31a5 SPATA31 subfamily A member 5 JBrowse link 17 2,417,700 2,423,486 RGD:1600115
G Sun1 Sad1 and UNC84 domain containing 1 JBrowse link 12 17,488,482 17,533,334 RGD:1624291
G Tekt3 tektin 3 JBrowse link 10 49,472,520 49,506,473 RGD:8655532
G Tex101 testis expressed 101 JBrowse link 1 81,529,776 81,534,149 RGD:1624291
RGD:1600115
G Tmem225 transmembrane protein 225 JBrowse link 8 44,001,199 44,003,757 RGD:1600115
G Trip11 thyroid hormone receptor interactor 11 JBrowse link 6 125,741,520 125,812,926 RGD:1624291
acrosomal vesicle term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AABR07026557.1 RGD:1600115
G Abcc9 ATP binding cassette subfamily C member 9 JBrowse link 4 176,806,098 176,928,540 RGD:12792002
G Abhd2 abhydrolase domain containing 2, acylglycerol lipase JBrowse link 1 140,998,240 141,087,405 RGD:1624291
G Ace3 angiotensin I converting enzyme (peptidyl-dipeptidase A) 3 JBrowse link 10 94,191,699 94,206,276 RGD:1600115
G Acr acrosin JBrowse link 7 130,541,320 130,548,356 RGD:1299864
RGD:1600115
RGD:1624291
RGD:1598715
G Acrbp acrosin binding protein JBrowse link 4 157,563,990 157,577,045 RGD:1600115
RGD:1624291
RGD:13792537
G Acrv1 acrosomal vesicle protein 1 JBrowse link 8 39,164,991 39,170,568 RGD:1624291
G Adam15 ADAM metallopeptidase domain 15 JBrowse link 2 188,661,831 188,672,337 RGD:1600115
G Adam2 ADAM metallopeptidase domain 2 JBrowse link 15 42,708,536 42,751,281 RGD:68863
G Akap3 A-kinase anchoring protein 3 JBrowse link 4 159,399,686 159,425,512 RGD:1624291
G Arc activity-regulated cytoskeleton-associated protein JBrowse link 7 115,907,097 115,911,059 RGD:1600115
G Arsa arylsulfatase A JBrowse link 7 130,446,644 130,452,632 RGD:1599222
G Atp6v0a2 ATPase H+ transporting V0 subunit a2 JBrowse link 12 37,368,321 37,398,233 RGD:1624291
G Atp6v1e2 ATPase H+ transporting V1 subunit E2 JBrowse link 6 10,510,370 10,517,059 RGD:1624291
G Atp8b3 ATPase phospholipid transporting 8B3 JBrowse link 7 12,043,764 12,063,668 RGD:1624291
G Atp8b5p ATPase, class I, type 8B, member 5, pseudogene JBrowse link 5 58,717,375 58,830,617 RGD:1600115
G Bmf Bcl2 modifying factor JBrowse link 3 110,303,515 110,324,125 RGD:2314008
G C4bpa complement component 4 binding protein, alpha JBrowse link 13 47,342,090 47,377,580 RGD:1624291
G Calcr calcitonin receptor JBrowse link 4 28,627,439 28,702,559 RGD:1624291
RGD:1600115
G Calr calreticulin JBrowse link 19 25,956,771 25,961,666 RGD:2326229
G Capn11 calpain 11 JBrowse link 9 17,728,845 17,750,357 RGD:1624291
RGD:1600115
G Capza3 capping actin protein of muscle Z-line subunit alpha 3 JBrowse link 4 174,181,644 174,182,857 RGD:69796
RGD:1600115
RGD:1624291
G Capzb capping actin protein of muscle Z-line subunit beta JBrowse link 5 157,642,742 157,742,487 RGD:1624291
G Catsper3 cation channel, sperm associated 3 JBrowse link 17 8,900,034 8,925,385 RGD:1624291
G Catsper4 cation channel, sperm associated 4 JBrowse link 5 152,430,052 152,446,808 RGD:1624291
G Cct6a chaperonin containing TCP1 subunit 6A JBrowse link 12 30,491,584 30,501,813 RGD:1624291
G Cd46 CD46 molecule JBrowse link 13 113,786,525 113,818,741 RGD:2293573
G Cep131 centrosomal protein 131 JBrowse link 10 109,243,240 109,267,636 RGD:1624291
G Clk3 CDC-like kinase 3 JBrowse link 8 62,528,135 62,543,550 RGD:1600115
G Crcp CGRP receptor component JBrowse link 12 30,125,237 30,160,857 RGD:1624291
RGD:1600115
G Csnk2a2 casein kinase 2 alpha 2 JBrowse link 19 9,972,537 10,012,043 RGD:11565138
G Ctnna1 catenin alpha 1 JBrowse link 18 27,923,229 28,055,972 RGD:2289801
G Ctsh cathepsin H JBrowse link 8 97,439,155 97,458,293 RGD:5686399
G Cxadr CXADR, Ig-like cell adhesion molecule JBrowse link 11 16,826,269 16,873,564 RGD:1624291
RGD:1600115
G Dkkl1 dickkopf like acrosomal protein 1 JBrowse link 1 101,205,426 101,210,675 RGD:1624291
G Dnajb3 DnaJ heat shock protein family (Hsp40) member B3 JBrowse link 9 95,289,918 95,290,931 RGD:1624291
G Dpep3 dipeptidase 3 JBrowse link 19 37,946,516 37,955,199 RGD:1624291
RGD:1600115
G Drd2 dopamine receptor D2 JBrowse link 8 53,678,777 53,743,643 RGD:2311573
G Enkur enkurin, TRPC channel interacting protein JBrowse link 17 88,071,794 88,095,444 RGD:1624291
RGD:13792537
G Eppin epididymal peptidase inhibitor JBrowse link 3 161,043,761 161,050,550 RGD:1624291
G Fabp9 fatty acid binding protein 9 JBrowse link 2 93,803,503 93,807,069 RGD:634410
G Fam170b family with sequence similarity 170, member B JBrowse link 16 9,074,044 9,076,885 RGD:1624291
RGD:13792537
G Fndc3a fibronectin type III domain containing 3a JBrowse link 15 54,378,865 54,582,954 RGD:1624291
G Gapdhs glyceraldehyde-3-phosphate dehydrogenase, spermatogenic JBrowse link 1 89,180,063 89,195,347 RGD:1303349
G Glipr1l1 GLIPR1 like 1 JBrowse link 7 54,828,576 54,855,556 RGD:1624291
G Gnat3 G protein subunit alpha transducin 3 JBrowse link 4 13,827,764 13,878,126 RGD:2302145
G Hexb hexosaminidase subunit beta JBrowse link 2 27,983,925 28,003,260 RGD:1624291
RGD:1600115
G Hyal3 hyaluronidase 3 JBrowse link 8 116,336,512 116,342,147 RGD:1624291
RGD:1600115
G Hyal5 hyaluronoglucosaminidase 5 JBrowse link 4 52,232,565 52,319,777 RGD:1624291
G Ica1l islet cell autoantigen 1-like JBrowse link 9 66,788,094 66,848,958 RGD:1624291
RGD:1600115
G Iqcf1 IQ motif containing F1 JBrowse link 8 115,191,919 115,195,599 RGD:1624291
RGD:13792537
G Iqub IQ motif and ubiquitin domain containing JBrowse link 4 51,482,169 51,586,881 RGD:1624291
G Itga1 integrin subunit alpha 1 JBrowse link 2 47,127,403 47,281,387 RGD:1581320
G Itgb1 integrin subunit beta 1 JBrowse link 19 61,677,512 61,725,537 RGD:1581320
G Izumo1 izumo sperm-egg fusion 1 JBrowse link 1 101,603,222 101,608,977 RGD:1624291
G Kcnj11 potassium inwardly-rectifying channel, subfamily J, member 11 JBrowse link 1 102,103,093 102,107,134 RGD:12792002
G Kit KIT proto-oncogene receptor tyrosine kinase JBrowse link 14 35,072,131 35,149,638 RGD:2292533
G Klk1 kallikrein 1 JBrowse link 1 100,131,562 100,135,556 RGD:1641807
G LOC100910138 serine protease inhibitor Kazal-type 2-like JBrowse link 14 33,906,836 33,913,448 RGD:1600115
G LOC100911204 protein CASC5-like JBrowse link 3 112,531,429 112,560,698 RGD:1624291
G Loxl1 lysyl oxidase-like 1 JBrowse link 8 63,067,757 63,092,124 RGD:7394733
G Lrguk leucine-rich repeats and guanylate kinase domain containing JBrowse link 4 61,419,987 61,544,748 RGD:1624291
G Ly6k lymphocyte antigen 6 family member K JBrowse link 7 116,103,644 116,107,148 RGD:1624291
G Lyzl4 lysozyme-like 4 JBrowse link 8 130,219,984 130,228,066 RGD:1624291
RGD:1600115
G Mroh2b maestro heat-like repeat family member 2B JBrowse link 2 54,621,140 54,675,142 RGD:1624291
G Ncf2 neutrophil cytosolic factor 2 JBrowse link 13 70,226,441 70,259,019 RGD:1624291
G Notch1 notch receptor 1 JBrowse link 3 3,905,562 3,951,015 RGD:2302248
G Nudt1 nudix hydrolase 1 JBrowse link 12 16,391,578 16,398,771 RGD:633232
G Pate4 prostate and testis expressed 4 JBrowse link 8 36,815,007 36,817,747 RGD:1624291
G Pcsk4 proprotein convertase subtilisin/kexin type 4 JBrowse link 7 12,247,498 12,255,721 RGD:1624291
RGD:1600115
G Pdia3 protein disulfide isomerase family A, member 3 JBrowse link 3 113,376,983 113,400,707 RGD:9999140
G Pomt1 protein-O-mannosyltransferase 1 JBrowse link 3 11,253,424 11,271,873 RGD:1624291
G Ppfia3 PTPRF interacting protein alpha 3 JBrowse link 1 101,328,547 101,357,391 RGD:11344941
RGD:1624291
RGD:1600115
G Pramef27 PRAME family member 27 JBrowse link 5 162,158,000 162,165,475 RGD:1600115
G Prkaca protein kinase cAMP-activated catalytic subunit alpha JBrowse link 19 25,095,089 25,118,869 RGD:1600115
RGD:1624291
G Prkg1 protein kinase cGMP-dependent 1 JBrowse link 1 248,982,039 250,300,952 RGD:1599621
G Prss37 serine protease 37 JBrowse link 4 68,337,498 68,349,286 RGD:1624291
RGD:13792537
G Prss39 protease, serine, 39 JBrowse link 9 40,999,027 41,012,607 RGD:1600115
G Rab3a RAB3A, member RAS oncogene family JBrowse link 16 20,435,098 20,439,206 RGD:1624291
G Rcbtb2 RCC1 and BTB domain containing protein 2 JBrowse link 15 55,029,388 55,074,728 RGD:1624291
G RGD1561445 similar to novel protein JBrowse link X 123,050,468 123,100,804 RGD:1624291
G Scnn1a sodium channel epithelial 1 subunit alpha JBrowse link 4 157,834,339 157,860,472 RGD:13514091
G Semg1 semenogelin 1 JBrowse link 3 160,627,609 160,630,457 RGD:1624291
G Sh3gl3 SH3 domain containing GRB2 like 3, endophilin A3 JBrowse link 1 144,069,641 144,200,402 RGD:13504859
G Skil SKI-like proto-oncogene JBrowse link 2 115,862,932 115,891,304 RGD:2308887
G Slirp SRA stem-loop interacting RNA binding protein JBrowse link 6 111,476,768 111,486,039 RGD:1624291
G Spaca3 sperm acrosome associated 3 JBrowse link 10 68,227,736 68,235,295 RGD:1624291
G Spaca7 sperm acrosome associated 7 JBrowse link 16 82,261,120 82,288,091 RGD:1624291
G Spaca9 sperm acrosome associated 9 JBrowse link 3 7,269,851 7,279,253 RGD:1624291
RGD:13792537
G Spam1 sperm adhesion molecule 1 JBrowse link 4 52,194,201 52,204,369 RGD:1624291
G Spata31a5 SPATA31 subfamily A member 5 JBrowse link 17 2,417,700 2,423,486 RGD:8553693
G Spesp1 sperm equatorial segment protein 1 JBrowse link 8 67,217,801 67,233,172 RGD:1624291
RGD:13792537
G Spink2 serine peptidase inhibitor, Kazal type 2 JBrowse link 14 33,247,278 33,253,913 RGD:1600115
RGD:1624291
G Stk31 serine threonine kinase 31 JBrowse link 4 79,055,493 79,153,849 RGD:1624291
G Stx1a syntaxin 1A JBrowse link 12 24,682,050 24,710,002 RGD:1624291
G Sv2b synaptic vesicle glycoprotein 2b JBrowse link 1 136,664,199 136,842,247 RGD:1600115
G Syt8 synaptotagmin 8 JBrowse link 1 215,605,408 215,607,602 RGD:1600115
G Tbc1d21 TBC1 domain family, member 21 JBrowse link 8 63,138,801 63,150,694 RGD:1624291
G Tbxa2r thromboxane A2 receptor JBrowse link 7 11,253,153 11,259,233 RGD:1601437
G Tcp1 t-complex 1 JBrowse link 1 48,025,664 48,033,343 RGD:1624291
G Tcp11 t-complex 11 JBrowse link 20 7,645,619 7,657,222 RGD:1624291
RGD:1600115
G Tctex1d4 Tctex1 domain containing 4 JBrowse link 5 135,995,128 135,997,807 RGD:1624291
G Tex101 testis expressed 101 JBrowse link 1 81,529,776 81,534,149 RGD:1600115
RGD:1624291
G Tex22 testis expressed 22 JBrowse link 6 137,889,197 137,903,312 RGD:1624291
G Trim36 tripartite motif-containing 36 JBrowse link 18 40,081,028 40,134,673 RGD:1624291
G Tssk2 testis-specific serine kinase 2 JBrowse link 11 87,235,058 87,236,413 RGD:1624291
RGD:1600115
G Txndc8 thioredoxin domain containing 8 JBrowse link 5 75,088,063 75,116,427 RGD:1303999
RGD:1624291
G Usp8 ubiquitin specific peptidase 8 JBrowse link 3 119,173,818 119,222,499 RGD:1624291
G Vdac2 voltage-dependent anion channel 2 JBrowse link 15 2,634,622 2,648,548 RGD:1624291
G Vezt vezatin, adherens junctions transmembrane protein JBrowse link 7 34,888,487 34,951,712 RGD:1600115
G Zpbp zona pellucida binding protein JBrowse link 14 91,360,670 91,556,406 RGD:1624291
RGD:13792537
G Zpbp2 zona pellucida binding protein 2 JBrowse link 10 86,513,645 86,523,375 RGD:1624291
RGD:13792537
alveolar lamellar body term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abca3 ATP binding cassette subfamily A member 3 JBrowse link 10 13,723,365 13,780,558 RGD:1624291
G Ctsh cathepsin H JBrowse link 8 97,439,155 97,458,293 RGD:727636
RGD:1600115
RGD:1624291
RGD:5686400
G Lamp1 lysosomal-associated membrane protein 1 JBrowse link 16 81,689,576 81,714,341 RGD:4892636
G Napsa napsin A aspartic peptidase JBrowse link 1 100,577,497 100,589,802 RGD:1624291
G Rab14 RAB14, member RAS oncogene family JBrowse link 3 14,373,270 14,395,357 RGD:2306298
G Rab7a RAB7A, member RAS oncogene family JBrowse link 4 119,910,461 119,963,065 RGD:4892636
G Sftpb surfactant protein B JBrowse link 4 100,166,855 100,175,941 RGD:4143471
RGD:13792537
G Sftpc surfactant protein C JBrowse link 15 52,211,538 52,214,480 RGD:4143485
alveolar lamellar body membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abca3 ATP binding cassette subfamily A member 3 JBrowse link 10 13,723,365 13,780,558 RGD:1598549
RGD:1624291
G Lamp3 lysosomal-associated membrane protein 3 JBrowse link 11 84,930,965 85,000,694 RGD:1624291
RGD:11041051
anchored component of synaptic vesicle membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cplx3 complexin 3 JBrowse link 8 62,379,502 62,386,264 RGD:1624291
G Dnajc5 DnaJ heat shock protein family (Hsp40) member C5 JBrowse link 3 177,012,714 177,047,787 RGD:13702369
RGD:632551
G Rab10 RAB10, member RAS oncogene family JBrowse link 6 27,668,387 27,721,120 RGD:13432355
G Rab11b RAB11B, member RAS oncogene family JBrowse link 7 18,598,991 18,612,132 RGD:12050113
RGD:13432355
G Rab14 RAB14, member RAS oncogene family JBrowse link 3 14,373,270 14,395,357 RGD:13432355
G Rab26 RAB26, member RAS oncogene family JBrowse link 10 13,894,271 13,898,578 RGD:1624291
G Rab27b RAB27B, member RAS oncogene family JBrowse link 18 68,486,006 68,644,595 RGD:13432355
G Rab2a RAB2A, member RAS oncogene family JBrowse link 5 21,632,654 21,696,721 RGD:13432355
G Rab35 RAB35, member RAS oncogene family JBrowse link 12 46,704,274 46,718,404 RGD:13432355
G Rab3a RAB3A, member RAS oncogene family JBrowse link 16 20,435,098 20,439,206 RGD:12050113
RGD:13792537
RGD:1624291
RGD:13432355
G Rab3b RAB3B, member RAS oncogene family JBrowse link 5 128,501,789 128,568,170 RGD:13432355
RGD:1624291
RGD:12050113
G Rab3c RAB3C, member RAS oncogene family JBrowse link 2 41,570,955 41,786,681 RGD:13702220
G Rab4a RAB4A, member RAS oncogene family JBrowse link 19 56,585,598 56,613,078 RGD:13432355
G Rab4b RAB4B, member RAS oncogene family JBrowse link 1 83,979,298 83,990,680 RGD:13432355
G Rab5a RAB5A, member RAS oncogene family JBrowse link 9 5,910 6,065 RGD:12050113
RGD:13432355
RGD:13792537
G Rab5al1 Rab5a, member RAS oncogene family-like 1 JBrowse link 14 72,889,022 72,891,156 RGD:12050113
RGD:13432355
RGD:13792537
G Rab5b RAB5B, member RAS oncogene family JBrowse link 7 3,104,530 3,123,384 RGD:13432355
G Rab5c RAB5C, member RAS oncogene family JBrowse link 10 88,621,924 88,645,364 RGD:13432355
G Rab7a RAB7A, member RAS oncogene family JBrowse link 4 119,910,461 119,963,065 RGD:1624291
RGD:13432355
G Syn1 synapsin I JBrowse link X 1,321,315 1,379,202 RGD:12050113
azurophil granule term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AABR07053516.1 RGD:1600115
G Anxa11 annexin A11 JBrowse link 16 3,867,193 3,912,043 RGD:1624291
G Hexa hexosaminidase subunit alpha JBrowse link 8 64,325,435 64,350,775 RGD:1624291
G Hexb hexosaminidase subunit beta JBrowse link 2 27,983,925 28,003,260 RGD:1600115
RGD:1624291
G Mpo myeloperoxidase JBrowse link 10 75,087,892 75,098,260 RGD:1624291
G Nos1 nitric oxide synthase 1 JBrowse link 12 44,214,949 44,405,530 RGD:1580263
G Np4 defensin NP-4 precursor JBrowse link 16 75,478,548 75,481,146 RGD:1624291
G Olfm4 olfactomedin 4 JBrowse link 15 62,384,263 62,429,450 RGD:1624291
G Snap23 synaptosome associated protein 23 JBrowse link 3 112,333,972 112,362,960 RGD:1624291
G Stx3 syntaxin 3 JBrowse link 1 228,137,781 228,195,004 RGD:1624291
G Stx7 syntaxin 7 JBrowse link 1 22,241,655 22,281,850 RGD:1624291
G Stxbp2 syntaxin binding protein 2 JBrowse link 12 2,180,101 2,191,863 RGD:1600115
RGD:1624291
azurophil granule lumen term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Prss57 serine protease 57 JBrowse link 7 12,798,310 12,804,668 RGD:1624291
RGD:1600115
G Prtn3 proteinase 3 JBrowse link 7 12,643,712 12,646,951 RGD:1624291
azurophil granule membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Vamp1 vesicle-associated membrane protein 1 JBrowse link 4 157,726,941 157,733,644 RGD:1624291
G Vamp7 vesicle-associated membrane protein 7 JBrowse link 12 18,996,566 19,033,714 RGD:1624291
G Vamp8 vesicle-associated membrane protein 8 JBrowse link 4 100,250,301 100,252,756 RGD:1600115
RGD:1624291
chromaffin granule term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Chga chromogranin A JBrowse link 6 126,434,226 126,445,569 RGD:2315552
RGD:13792537
G Clu clusterin JBrowse link 15 42,626,612 42,665,858 RGD:1600115
G Serpine1 serpin family E member 1 JBrowse link 12 22,641,104 22,651,482 RGD:8547918
chromaffin granule lumen term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dbh dopamine beta-hydroxylase JBrowse link 3 5,709,236 5,731,895 RGD:1600115
chromaffin granule membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Anxa7 annexin A7 JBrowse link 15 4,254,470 4,281,296 RGD:1624291
RGD:13792537
G Dbh dopamine beta-hydroxylase JBrowse link 3 5,709,236 5,731,895 RGD:1600115
G Sri sorcin JBrowse link 4 23,004,657 23,029,233 RGD:1624291
G Syt1 synaptotagmin 1 JBrowse link 7 50,084,063 50,638,996 RGD:1600115
G Syt2 synaptotagmin 2 JBrowse link 13 51,569,248 51,577,824 RGD:1600115
cortical granule term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Astl astacin like metalloendopeptidase JBrowse link 3 119,783,717 119,799,450 RGD:1624291
dense core granule term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bace2 beta-secretase 2 JBrowse link 11 37,798,397 37,880,624 RGD:13782168
G Baiap3 BAI1-associated protein 3 JBrowse link 10 14,601,133 14,613,881 RGD:1624291
G Cadps calcium dependent secretion activator JBrowse link 15 15,275,489 15,690,575 RGD:11535098
G Cpe carboxypeptidase E JBrowse link 16 26,906,716 27,014,811 RGD:6483099
G Crhbp corticotropin releasing hormone binding protein JBrowse link 2 25,141,471 25,153,334 RGD:5490549
G Ecrg4 ECRG4 augurin precursor JBrowse link 9 50,526,811 50,548,056 RGD:12907558
RGD:1624291
G Myrip myosin VIIA and Rab interacting protein JBrowse link 8 128,972,307 129,139,257 RGD:8554303
G Ncs1 neuronal calcium sensor 1 JBrowse link 3 10,556,250 10,602,672 RGD:2316314
G Scg2 secretogranin II JBrowse link 9 85,237,460 85,243,024 RGD:1624291
G Slc18a2 solute carrier family 18 member A2 JBrowse link 1 280,397,831 280,457,968 RGD:2317337
G Sod1 superoxide dismutase 1 JBrowse link 11 30,363,282 30,368,858 RGD:8657024
G Spx spexin hormone JBrowse link 4 176,629,597 176,635,698 RGD:1624291
RGD:12907558
G Syt1 synaptotagmin 1 JBrowse link 7 50,084,063 50,638,996 RGD:2311146
RGD:13792537
RGD:1624291
RGD:8553894
RGD:7205660
G Syt2 synaptotagmin 2 JBrowse link 13 51,569,248 51,577,824 RGD:13792537
G Syt4 synaptotagmin 4 JBrowse link 18 24,172,580 24,181,989 RGD:7205660
RGD:1624291
RGD:11535095
G Syt5 synaptotagmin 5 JBrowse link 1 72,859,806 72,867,934 RGD:1624291
RGD:13792537
G Syt7 synaptotagmin 7 JBrowse link 1 226,435,816 226,498,008 RGD:7205660
RGD:7241272
G Syt8 synaptotagmin 8 JBrowse link 1 215,605,408 215,607,602 RGD:13792537
G Syt9 synaptotagmin 9 JBrowse link 1 171,592,703 171,769,780 RGD:2311146
RGD:13792537
RGD:1624291
RGD:7205660
G Vps13a vacuolar protein sorting 13 homolog A JBrowse link 1 235,352,513 235,813,597 RGD:1624291
dense core granule membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adam8 ADAM metallopeptidase domain 8 JBrowse link 1 212,317,510 212,332,895 RGD:1624291
endosome to plasma membrane transport vesicle term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G App amyloid beta precursor protein JBrowse link 11 24,425,013 24,641,872 RGD:1624291
G Picalm phosphatidylinositol binding clathrin assembly protein JBrowse link 1 154,377,229 154,458,966 RGD:1600115
RGD:1624291
G Rab6a RAB6A, member RAS oncogene family JBrowse link 1 165,624,973 165,664,201 RGD:1624291
RGD:1600115
epidermal lamellar body term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abca12 ATP binding cassette subfamily A member 12 JBrowse link 9 78,521,477 78,693,421 RGD:1624291
G Klk5 kallikrein related-peptidase 5 JBrowse link 1 99,781,291 99,793,745 RGD:1624291
G Klk7 kallikrein-related peptidase 7 JBrowse link 1 99,749,991 99,754,723 RGD:1624291
RGD:1600115
G Spink5 serine peptidase inhibitor, Kazal type 5 JBrowse link 18 35,118,300 35,190,458 RGD:1624291
exocytic vesicle term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Akap7 A-kinase anchoring protein 7 JBrowse link 1 21,129,213 21,263,850 RGD:1303982
G Anxa1 annexin A1 JBrowse link 1 237,893,983 237,910,002 RGD:1624291
G Anxa13 annexin A13 JBrowse link 7 98,217,642 98,270,442 RGD:1624291
G Anxa2 annexin A2 JBrowse link 8 75,687,134 75,723,589 RGD:1624291
G Aqp2 aquaporin 2 JBrowse link 7 141,237,802 141,242,837 RGD:1303982
G Arf3 ADP-ribosylation factor 3 JBrowse link 7 140,412,463 140,438,751 RGD:1624291
G Arf5 ADP-ribosylation factor 5 JBrowse link 4 55,715,744 55,718,670 RGD:1624291
G Arf6 ADP-ribosylation factor 6 JBrowse link 6 91,697,109 91,698,257 RGD:1624291
G Arl6ip5 ADP-ribosylation factor like GTPase 6 interacting protein 5 JBrowse link 4 129,574,363 129,598,240 RGD:1624291
G Atl3 atlastin GTPase 3 JBrowse link 1 222,746,023 222,788,439 RGD:1624291
G Atp1a1 ATPase Na+/K+ transporting subunit alpha 1 JBrowse link 2 204,003,742 204,032,023 RGD:1624291
G Atp1a2 ATPase Na+/K+ transporting subunit alpha 2 JBrowse link 13 90,651,682 90,676,629 RGD:1624291
G Cav1 caveolin 1 JBrowse link 4 44,597,123 44,630,206 RGD:1624291
G Cltc clathrin heavy chain JBrowse link 10 74,014,560 74,070,578 RGD:1624291
G Copa COPI coat complex subunit alpha JBrowse link 13 90,467,285 90,508,894 RGD:1624291
G Copb2 COPI coat complex subunit beta 2 JBrowse link 8 106,582,339 106,603,763 RGD:1624291
G Copg1 COPI coat complex subunit gamma 1 JBrowse link 4 119,815,041 119,840,997 RGD:1624291
G Copg2 COPI coat complex subunit gamma 2 JBrowse link 4 58,064,394 58,195,242 RGD:1624291
G Ctnnb1 catenin beta 1 JBrowse link 8 129,601,511 129,628,378 RGD:1624291
G Dpysl3 dihydropyrimidinase-like 3 JBrowse link 18 37,716,371 37,819,347 RGD:1298810
G Gnai2 G protein subunit alpha i2 JBrowse link 8 116,370,730 116,391,337 RGD:1624291
G Igf1 insulin-like growth factor 1 JBrowse link 7 28,412,123 28,491,815 RGD:1624291
RGD:1600115
G Ipo5 importin 5 JBrowse link 15 106,243,110 106,293,326 RGD:1624291
G Iqgap1 IQ motif containing GTPase activating protein 1 JBrowse link 1 142,525,041 142,615,673 RGD:1624291
G Iqgap2 IQ motif containing GTPase activating protein 2 JBrowse link 2 26,161,628 26,439,067 RGD:1624291
G Ktn1 kinectin 1 JBrowse link 15 24,465,761 24,552,833 RGD:1624291
G Lman2 lectin, mannose-binding 2 JBrowse link 17 9,798,136 9,815,820 RGD:1624291
G Mx2 MX dynamin like GTPase 2 JBrowse link 11 38,035,306 38,066,185 RGD:1624291
G Myh9 myosin, heavy chain 9 JBrowse link 7 118,740,005 118,792,507 RGD:1624291
G Nek9 NIMA-related kinase 9 JBrowse link 6 109,121,524 109,162,433 RGD:1624291
G Nkd2 NKD inhibitor of WNT signaling pathway 2 JBrowse link 1 32,054,390 32,085,416 RGD:1624291
G Phb2 prohibitin 2 JBrowse link 4 157,230,769 157,235,375 RGD:1624291
G Pi4k2a phosphatidylinositol 4-kinase type 2 alpha JBrowse link 1 261,337,594 261,362,509 RGD:2306407
G Rab10 RAB10, member RAS oncogene family JBrowse link 6 27,668,387 27,721,120 RGD:1600115
RGD:1624291
G Rab11a RAB11a, member RAS oncogene family JBrowse link 8 70,192,975 70,215,719 RGD:1624291
G Rab1a RAB1A, member RAS oncogene family JBrowse link 14 104,475,082 104,500,176 RGD:1624291
G Rab1b RAB1B, member RAS oncogene family JBrowse link 1 220,483,529 220,491,469 RGD:1624291
G Rab27a RAB27A, member RAS oncogene family JBrowse link 8 79,722,334 79,776,228 RGD:1624291
G Rab5a RAB5A, member RAS oncogene family JBrowse link 9 5,910 6,065 RGD:1624291
G Rab5b RAB5B, member RAS oncogene family JBrowse link 7 3,104,530 3,123,384 RGD:1624291
G Rab5c RAB5C, member RAS oncogene family JBrowse link 10 88,621,924 88,645,364 RGD:1624291
G Rab7a RAB7A, member RAS oncogene family JBrowse link 4 119,910,461 119,963,065 RGD:1624291
G Rab8a RAB8A, member RAS oncogene family JBrowse link 16 19,355,047 19,376,776 RGD:1624291
G Rack1 receptor for activated C kinase 1 JBrowse link 10 34,149,717 34,155,198 RGD:1624291
G Rap1b RAP1B, member of RAS oncogene family JBrowse link 7 60,850,406 60,878,226 RGD:1624291
G Sec22b SEC22 homolog B, vesicle trafficking protein JBrowse link 2 200,076,079 200,096,861 RGD:1624291
G Syt1 synaptotagmin 1 JBrowse link 7 50,084,063 50,638,996 RGD:13792537
G Syt10 synaptotagmin 10 JBrowse link 7 130,769,039 130,827,030 RGD:1624291
RGD:13792537
RGD:1600115
G Syt11 synaptotagmin 11 JBrowse link 2 188,112,301 188,138,180 RGD:13792537
G Syt12 synaptotagmin 12 JBrowse link 1 219,690,013 219,719,359 RGD:13792537
G Syt13 synaptotagmin 13 JBrowse link 3 81,814,287 81,852,454 RGD:13792537
G Syt15 synaptotagmin 15 JBrowse link 16 10,554,136 10,564,934 RGD:13792537
G Syt17 synaptotagmin 17 JBrowse link 1 188,034,614 188,101,590 RGD:13792537
G Syt2 synaptotagmin 2 JBrowse link 13 51,569,248 51,577,824 RGD:13792537
G Syt3 synaptotagmin 3 JBrowse link 1 100,379,236 100,407,862 RGD:13792537
G Syt4 synaptotagmin 4 JBrowse link 18 24,172,580 24,181,989 RGD:11535095
RGD:13792537
G Syt5 synaptotagmin 5 JBrowse link 1 72,859,806 72,867,934 RGD:13792537
G Syt6 synaptotagmin 6 JBrowse link 2 206,064,181 206,119,034 RGD:13792537
G Syt7 synaptotagmin 7 JBrowse link 1 226,435,816 226,498,008 RGD:13792537
G Syt8 synaptotagmin 8 JBrowse link 1 215,605,408 215,607,602 RGD:13792537
G Syt9 synaptotagmin 9 JBrowse link 1 171,592,703 171,769,780 RGD:13792537
G Sytl1 synaptotagmin-like 1 JBrowse link 5 151,448,639 151,459,870 RGD:13792537
G Sytl2 synaptotagmin-like 2 JBrowse link 1
1
154,536,592
156,334,298
154,599,515
156,440,327
RGD:1624291
RGD:13792537
G Sytl3 synaptotagmin-like 3 JBrowse link 1 47,216,988 47,287,372 RGD:13792537
G Sytl4 synaptotagmin-like 4 JBrowse link X 104,763,961 104,814,152 RGD:13792537
G Sytl5 synaptotagmin-like 5 JBrowse link X 13,857,669 14,109,592 RGD:13792537
G Tm9sf3 transmembrane 9 superfamily member 3 JBrowse link 1 260,464,935 260,517,997 RGD:1624291
G Tmed9 transmembrane p24 trafficking protein 9 JBrowse link 17 9,560,735 9,565,249 RGD:1624291
G Unc13d unc-13 homolog D JBrowse link 10 104,613,907 104,628,664 RGD:1600115
RGD:1624291
G Uso1 USO1 vesicle transport factor JBrowse link 14 17,371,451 17,436,948 RGD:1624291
G Vapa VAMP associated protein A JBrowse link 9 113,300,831 113,331,872 RGD:1624291
G Vdac1 voltage-dependent anion channel 1 JBrowse link 10 37,724,915 37,752,827 RGD:1624291
G Vdac2 voltage-dependent anion channel 2 JBrowse link 15 2,634,622 2,648,548 RGD:1624291
extrinsic component of neuronal dense core vesicle membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cadps calcium dependent secretion activator JBrowse link 15 15,275,489 15,690,575 RGD:13702263
G Kif1a kinesin family member 1A JBrowse link 9 100,171,851 100,253,626 RGD:14995321
G Stxbp5 syntaxin binding protein 5 JBrowse link 1 3,858,917 4,011,684 RGD:1624291
extrinsic component of synaptic vesicle membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Amph amphiphysin JBrowse link 17 48,304,324 48,562,838 RGD:13702221
G Atp6v1b1 ATPase H+ transporting V1 subunit B1 JBrowse link 4 115,417,100 115,435,754 RGD:12050113
G Bin1 bridging integrator 1 JBrowse link 18 25,163,575 25,222,139 RGD:631926
G Cltc clathrin heavy chain JBrowse link 10 74,014,560 74,070,578 RGD:13702292
G Doc2a double C2 domain alpha JBrowse link 1 198,282,828 198,288,611 RGD:1357915
G Rph3a rabphilin 3A JBrowse link 12 41,073,296 41,149,799 RGD:12050113
RGD:13702383
G Sgta small glutamine rich tetratricopeptide repeat containing alpha JBrowse link 7 11,521,949 11,538,691 RGD:13702369
G Syn1 synapsin I JBrowse link X 1,321,315 1,379,202 RGD:13702180
RGD:13702282
G Syn2 synapsin II JBrowse link 4 147,037,179 147,195,096 RGD:13702354
RGD:13702180
G Syn3 synapsin III JBrowse link 7 23,403,896 23,808,602 RGD:13702180
RGD:13702156
inner acrosomal membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cd46 CD46 molecule JBrowse link 13 113,786,525 113,818,741 RGD:2293559
G Eqtn equatorin JBrowse link 5 113,852,191 113,881,142 RGD:1600115
RGD:13792537
RGD:1624291
G Tmem190 transmembrane protein 190 JBrowse link 1 72,629,706 72,633,423 RGD:1624291
RGD:13792537
G Trip11 thyroid hormone receptor interactor 11 JBrowse link 6 125,741,520 125,812,926 RGD:8655529
insulin-responsive compartment term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Akt2 AKT serine/threonine kinase 2 JBrowse link 1 84,400,939 84,451,223 RGD:2306429
RGD:2306430
G Dennd4c DENN domain containing 4C JBrowse link 5 105,100,081 105,195,634 RGD:1624291
G Lnpep leucyl and cystinyl aminopeptidase JBrowse link 1 59,289,392 59,384,540 RGD:631975
RGD:2306434
G Lrp1 LDL receptor related protein 1 JBrowse link 7 70,846,313 70,927,028 RGD:13800551
G Myo5a myosin VA JBrowse link 8 82,038,966 82,156,507 RGD:1624291
RGD:1600115
G Pikfyve phosphoinositide kinase, FYVE-type zinc finger containing JBrowse link 9 71,911,744 72,005,816 RGD:1624291
G Rab10 RAB10, member RAS oncogene family JBrowse link 6 27,668,387 27,721,120 RGD:1600115
RGD:13792537
RGD:1624291
G Rab13 RAB13, member RAS oncogene family JBrowse link 2 189,581,209 189,586,358 RGD:8554419
G Rab4a RAB4A, member RAS oncogene family JBrowse link 19 56,585,598 56,613,078 RGD:2306265
G Rab4b RAB4B, member RAS oncogene family JBrowse link 1 83,979,298 83,990,680 RGD:1624291
RGD:13792537
G Slc2a4 solute carrier family 2 member 4 JBrowse link 10 56,552,921 56,558,562 RGD:2306265
RGD:1624291
RGD:2306434
RGD:2306430
RGD:2306429
integral component of neuronal dense core vesicle membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Slc18a2 solute carrier family 18 member A2 JBrowse link 1 280,397,831 280,457,968 RGD:2317337
G Syt4 synaptotagmin 4 JBrowse link 18 24,172,580 24,181,989 RGD:1624291
G Syt5 synaptotagmin 5 JBrowse link 1 72,859,806 72,867,934 RGD:1624291
integral component of synaptic vesicle membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atp6v0a1 ATPase H+ transporting V0 subunit a1 JBrowse link 10 88,914,264 88,967,736 RGD:12050113
G Atp6v1g2 ATPase H+ transporting V1 subunit G2 JBrowse link 20 4,821,265 4,824,829 RGD:1624291
G Atp8a1 ATPase phospholipid transporting 8A1 JBrowse link 14 41,972,398 42,210,555 RGD:13702180
G Clcn3 chloride voltage-gated channel 3 JBrowse link 16 32,448,821 32,520,649 RGD:1624291
G Gabra2 gamma-aminobutyric acid type A receptor subunit alpha 2 JBrowse link 14 39,662,411 39,801,082 RGD:1624291
G Lamp1 lysosomal-associated membrane protein 1 JBrowse link 16 81,689,576 81,714,341 RGD:12050113
G Mal2 mal, T-cell differentiation protein 2 JBrowse link 7 94,130,852 94,163,649 RGD:13702398
G Oprd1 opioid receptor, delta 1 JBrowse link 5 150,288,126 150,323,063 RGD:13702250
G Oprk1 opioid receptor, kappa 1 JBrowse link 5 13,742,655 13,760,460 RGD:13702363
G Ptprn2 protein tyrosine phosphatase, receptor type N2 JBrowse link 6 144,384,773 145,133,042 RGD:13702180
G Ptprs protein tyrosine phosphatase, receptor type, S JBrowse link 9 10,585,360 10,646,205 RGD:12790648
G Scamp1 secretory carrier membrane protein 1 JBrowse link 2 23,858,021 23,941,128 RGD:68303
RGD:69975
G Scamp5 secretory carrier membrane protein 5 JBrowse link 8 62,221,820 62,266,269 RGD:68303
G Slc10a4 solute carrier family 10, member 4 JBrowse link 14 37,764,839 37,770,059 RGD:1624291
G Slc17a6 solute carrier family 17 member 6 JBrowse link 1 106,980,463 107,038,717 RGD:9999204
RGD:13792537
G Slc17a7 solute carrier family 17 member 7 JBrowse link 1 101,161,265 101,172,292 RGD:9999204
RGD:13792537
G Slc17a8 solute carrier family 17 member 8 JBrowse link 7 30,215,231 30,274,993 RGD:1624291
RGD:13792537
G Slc18a2 solute carrier family 18 member A2 JBrowse link 1 280,397,831 280,457,968 RGD:13702244
G Slc18a3 solute carrier family 18 member A3 JBrowse link 16 8,682,668 8,685,529 RGD:13702155
RGD:13702308
G Slc30a3 solute carrier family 30 member 3 JBrowse link 6 26,629,752 26,650,106 RGD:1624291
G Slc32a1 solute carrier family 32 member 1 JBrowse link 3 155,102,980 155,107,815 RGD:9999204
RGD:13792537
RGD:13702256
G Slc6a17 solute carrier family 6 member 17 JBrowse link 2 210,249,663 210,299,770 RGD:13702218
G Slc6a7 solute carrier family 6 member 7 JBrowse link 18 56,305,765 56,325,179 RGD:13702417
G Slc6a9 solute carrier family 6 member 9 JBrowse link 5 136,669,674 136,703,702 RGD:13702299
G Stx12 syntaxin 12 JBrowse link 5 151,044,050 151,072,893 RGD:12050113
RGD:13792537
RGD:12050136
G Stx16 syntaxin 16 JBrowse link 3 172,154,739 172,183,699 RGD:12050113
G Stx1a syntaxin 1A JBrowse link 12 24,682,050 24,710,002 RGD:13702228
G Stx6 syntaxin 6 JBrowse link 13 72,804,218 72,850,757 RGD:12050113
RGD:13792537
RGD:12050136
G Stx7 syntaxin 7 JBrowse link 1 22,241,655 22,281,850 RGD:12050113
G Sv2a synaptic vesicle glycoprotein 2a JBrowse link 2 198,321,100 198,336,889 RGD:12050113
RGD:13702180
G Sv2b synaptic vesicle glycoprotein 2b JBrowse link 1 136,664,199 136,842,247 RGD:13702180
G Sv2c synaptic vesicle glycoprotein 2c JBrowse link 2 26,495,757 26,707,691 RGD:13702180
G Syngr1 synaptogyrin 1 JBrowse link 7 121,311,008 121,334,437 RGD:12050113
G Synpr synaptoporin JBrowse link 15 14,558,613 14,885,790 RGD:13702286
G Syp synaptophysin JBrowse link X 15,694,699 15,709,244 RGD:730209
RGD:13702387
RGD:12050136
G Sypl1 synaptophysin-like 1 JBrowse link 6 52,265,920 52,286,037 RGD:12050113
G Syt1 synaptotagmin 1 JBrowse link 7 50,084,063 50,638,996 RGD:12050113
RGD:13702422
G Syt11 synaptotagmin 11 JBrowse link 2 188,112,301 188,138,180 RGD:11079184
G Syt2 synaptotagmin 2 JBrowse link 13 51,569,248 51,577,824 RGD:13702259
G Syt9 synaptotagmin 9 JBrowse link 1 171,592,703 171,769,780 RGD:1624291
G Tmem163 transmembrane protein 163 JBrowse link 13 44,166,306 44,345,735 RGD:8553964
RGD:1624291
G Vamp1 vesicle-associated membrane protein 1 JBrowse link 4 157,726,941 157,733,644 RGD:13702405
G Vamp2 vesicle-associated membrane protein 2 JBrowse link 10 55,675,171 55,679,405 RGD:12050113
G Vamp3 vesicle-associated membrane protein 3 JBrowse link 5 168,126,157 168,136,628 RGD:12050113
G Vamp4 vesicle-associated membrane protein 4 JBrowse link 13 80,460,699 80,483,597 RGD:12050136
G Vamp7 vesicle-associated membrane protein 7 JBrowse link 12 18,996,566 19,033,714 RGD:12050113
RGD:13702238
G Wfs1 wolframin ER transmembrane glycoprotein JBrowse link 14 78,640,707 78,665,224 RGD:12050113
intrinsic component of neuronal dense core vesicle membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Syt4 synaptotagmin 4 JBrowse link 18 24,172,580 24,181,989 RGD:14995321
lamellar body term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Clip2 CAP-GLY domain containing linker protein 2 JBrowse link 12 25,172,957 25,236,935 RGD:61566
G Krtdap keratinocyte differentiation associated protein JBrowse link 1 89,234,689 89,235,610 RGD:1624291
G Smpd1 sphingomyelin phosphodiesterase 1 JBrowse link 1 170,383,682 170,387,525 RGD:1601349
mucin granule term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Vamp8 vesicle-associated membrane protein 8 JBrowse link 4 100,250,301 100,252,756 RGD:1600115
RGD:13792537
RGD:1624291
neuronal dense core vesicle term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Chga chromogranin A JBrowse link 6 126,434,226 126,445,569 RGD:15023486
G Dmxl2 Dmx-like 2 JBrowse link 8 58,932,575 59,077,788 RGD:1624291
G Kif1a kinesin family member 1A JBrowse link 9 100,171,851 100,253,626 RGD:15023486
G LOC100912228 pro-neuropeptide Y-like JBrowse link 4 79,573,999 79,581,212 RGD:14995321
RGD:15023486
G Npy neuropeptide Y JBrowse link 4 79,557,856 79,565,059 RGD:14995321
RGD:15023486
G Oprd1 opioid receptor, delta 1 JBrowse link 5 150,288,126 150,323,063 RGD:13702250
G Plat plasminogen activator, tissue type JBrowse link 16 74,098,263 74,122,897 RGD:13702320
G Scg2 secretogranin II JBrowse link 9 85,237,460 85,243,024 RGD:1600115
RGD:1624291
G Slc18a2 solute carrier family 18 member A2 JBrowse link 1 280,397,831 280,457,968 RGD:13702244
G Stxbp5l syntaxin binding protein 5-like JBrowse link 11 66,246,624 66,566,331 RGD:1624291
G Syt4 synaptotagmin 4 JBrowse link 18 24,172,580 24,181,989 RGD:15023486
neuronal dense core vesicle lumen term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pdyn prodynorphin JBrowse link 3 122,194,327 122,206,671 RGD:13702229
G Penk proenkephalin JBrowse link 5 17,056,412 17,061,762 RGD:13702175
outer acrosomal membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G C4bpa complement component 4 binding protein, alpha JBrowse link 13 47,342,090 47,377,580 RGD:1624291
G Eqtn equatorin JBrowse link 5 113,852,191 113,881,142 RGD:1600115
RGD:13792537
RGD:1624291
G Fam170b family with sequence similarity 170, member B JBrowse link 16 9,074,044 9,076,885 RGD:1624291
G Ift88 intraflagellar transport 88 JBrowse link 15 37,690,417 37,786,855 RGD:8655529
G Tekt3 tektin 3 JBrowse link 10 49,472,520 49,506,473 RGD:1600115
G Trip11 thyroid hormone receptor interactor 11 JBrowse link 6 125,741,520 125,812,926 RGD:8655529
platelet alpha granule term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G F5 coagulation factor V JBrowse link 13 82,479,997 82,535,540 RGD:1624291
G Fga fibrinogen alpha chain JBrowse link 2 181,997,562 182,013,726 RGD:1624291
RGD:1600115
G Fgb fibrinogen beta chain JBrowse link 2 182,028,044 182,035,026 RGD:1624291
G Fgg fibrinogen gamma chain JBrowse link 2 181,987,080 181,994,523 RGD:1624291
G Igf1 insulin-like growth factor 1 JBrowse link 7 28,412,123 28,491,815 RGD:10402780
G Igfbp3 insulin-like growth factor binding protein 3 JBrowse link 14 87,457,647 87,465,374 RGD:10402780
G Pf4 platelet factor 4 JBrowse link 14 18,848,549 18,849,258 RGD:2316766
G Ppbp pro-platelet basic protein JBrowse link 14 18,852,433 18,853,237 RGD:1624291
G Serpina5 serpin family A member 5 JBrowse link 6 127,753,152 127,772,403 RGD:1624291
G Serpine2 serpin family E member 2 JBrowse link 9 85,560,852 85,629,410 RGD:1624291
RGD:1600115
G Sparc secreted protein acidic and cysteine rich JBrowse link 10 40,742,390 40,764,232 RGD:1624291
G Stxbp1 syntaxin binding protein 1 JBrowse link 3 11,823,779 11,885,479 RGD:1624291
G Stxbp3 syntaxin binding protein 3 JBrowse link 2 211,595,763 211,638,756 RGD:1624291
G Thbs1 thrombospondin 1 JBrowse link 3 109,862,120 109,873,466 RGD:1624291
G Thbs2 thrombospondin 2 JBrowse link 1 56,653,929 56,683,571 RGD:1624291
G Treml1 triggering receptor expressed on myeloid cells-like 1 JBrowse link 9 14,597,172 14,603,622 RGD:1624291
G Vamp7 vesicle-associated membrane protein 7 JBrowse link 12 18,996,566 19,033,714 RGD:1624291
G Vps33b VPS33B, late endosome and lysosome associated JBrowse link 1 142,060,955 142,083,955 RGD:1624291
platelet alpha granule membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Selp selectin P JBrowse link 13 82,428,914 82,464,629 RGD:1624291
RGD:1600115
G Snca synuclein alpha JBrowse link 4 90,782,412 90,883,236 RGD:1624291
G Sparc secreted protein acidic and cysteine rich JBrowse link 10 40,742,390 40,764,232 RGD:1624291
platelet dense granule term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hps4 HPS4, biogenesis of lysosomal organelles complex 3 subunit 2 JBrowse link 12 50,285,239 50,315,893 RGD:1624291
platelet dense granule membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abcc4 ATP binding cassette subfamily C member 4 JBrowse link 15 103,695,415 103,927,980 RGD:1624291
G Itpr1 inositol 1,4,5-trisphosphate receptor, type 1 JBrowse link 4 140,247,297 140,580,749 RGD:1624291
RGD:1600115
G Lamp2 lysosomal-associated membrane protein 2 JBrowse link X 124,722,628 124,766,079 RGD:1624291
secretory granule term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AABR07003241.2 RGD:13792537
G AABR07003244.1 RGD:13792537
G Acp3 acid phosphatase 3 JBrowse link 8 112,838,574 112,884,062 RGD:2299977
G Angptl6 angiopoietin-like 6 JBrowse link 8 21,895,523 21,902,002 RGD:1624291
G Arpc2 actin related protein 2/3 complex, subunit 2 JBrowse link 9 81,518,163 81,548,871 RGD:11575051
G Atp2c1 ATPase secretory pathway Ca2+ transporting 1 JBrowse link 8 113,953,959 114,039,965 RGD:1581798
G Atp7a ATPase copper transporting alpha JBrowse link X 77,076,085 77,193,644 RGD:1581811
G Avp arginine vasopressin JBrowse link 3 123,117,482 123,119,460 RGD:2301932
RGD:13792537
G Baiap2 BAR/IMD domain containing adaptor protein 2 JBrowse link 10 109,107,326 109,187,458 RGD:9684991
G Bdnf brain-derived neurotrophic factor JBrowse link 3 100,768,637 100,819,216 RGD:1624291
G Bpifa2 BPI fold containing family A, member 2 JBrowse link 3 149,492,612 149,501,614 RGD:633795
G Brca2 BRCA2, DNA repair associated JBrowse link 12 503,660 544,754 RGD:1600115
RGD:1624291
G Cabp1 calcium binding protein 1 JBrowse link 12 47,185,449 47,209,785 RGD:14399957
G Cartpt CART prepropeptide JBrowse link 2 30,125,249 30,127,408 RGD:1624291
G Cbarp CACN subunit beta associated regulatory protein JBrowse link 7 12,433,422 12,441,048 RGD:10047103
RGD:13792537
RGD:1624291
G Ccl28 C-C motif chemokine ligand 28 JBrowse link 2 52,379,341 52,403,979 RGD:1624291
G Cdc42 cell division cycle 42 JBrowse link 5 155,690,267 155,728,385 RGD:8554063
G Cfp complement factor properdin JBrowse link X 1,311,121 1,316,683 RGD:1624291
G Chga chromogranin A JBrowse link 6 126,434,226 126,445,569 RGD:6906913
RGD:13792537
RGD:1600115
G Chgb chromogranin B JBrowse link 3 125,428,050 125,441,601 RGD:727646
RGD:13792537
RGD:1624291
G Clca1 chloride channel accessory 1 JBrowse link 2 250,897,980 250,923,711 RGD:1624291
G Clcn3 chloride voltage-gated channel 3 JBrowse link 16 32,448,821 32,520,649 RGD:1624291
G Cma1 chymase 1 JBrowse link 15 34,601,037 34,603,819 RGD:1624291
G Col1a1 collagen type I alpha 1 chain JBrowse link 10 82,745,801 82,762,790 RGD:8552887
G Cpe carboxypeptidase E JBrowse link 16 26,906,716 27,014,811 RGD:1626225
G Crhbp corticotropin releasing hormone binding protein JBrowse link 2 25,141,471 25,153,334 RGD:1600115
RGD:1624291
G Ctsg cathepsin G JBrowse link 15 35,107,333 35,113,678 RGD:1624291
RGD:1600115
G Ctsl cathepsin L JBrowse link 17 1,873,105 1,879,266 RGD:2315552
RGD:2315564
G Cyss cystatin S JBrowse link 3 144,427,430 144,431,768 RGD:2306759
G Dmd dystrophin JBrowse link X 51,149,358 53,519,271 RGD:12880360
G Dynll1 dynein light chain LC8-type 1 JBrowse link 12 47,074,200 47,076,573 RGD:1642149
G Ebag9 estrogen receptor binding site associated, antigen, 9 JBrowse link 7 83,564,563 83,582,516 RGD:1579800
RGD:13792537
G Ece1 endothelin converting enzyme 1 JBrowse link 5 156,215,469 156,318,652 RGD:728806
G Elane elastase, neutrophil expressed JBrowse link 7 12,638,320 12,640,168 RGD:1624291
G Exoc3l1 exocyst complex component 3-like 1 JBrowse link 19 37,245,269 37,252,789 RGD:1624291
G Fas Fas cell surface death receptor JBrowse link 1 252,589,785 252,624,790 RGD:8686425
G Fstl3 follistatin like 3 JBrowse link 7 12,806,031 12,810,556 RGD:1302294
G Fstl4 follistatin-like 4 JBrowse link 10 38,104,344 38,532,216 RGD:1624291
G Gal galanin and GMAP prepropeptide JBrowse link 1 218,653,059 218,657,922 RGD:1624342
RGD:13792537
G Gars glycyl-tRNA synthetase JBrowse link 4 85,235,122 85,276,085 RGD:1624291
G Gck glucokinase JBrowse link 14 86,149,146 86,191,589 RGD:2301947
RGD:2301951
G Gh1 growth hormone 1 JBrowse link 10 94,486,204 94,488,181 RGD:2315687
RGD:1624291
G Ghrhr growth hormone releasing hormone receptor JBrowse link 4 85,587,321 85,602,389 RGD:1624291
G Gkn1 gastrokine 1 JBrowse link 4 119,143,070 119,148,358 RGD:1624291
G Hcrt hypocretin neuropeptide precursor JBrowse link 10 88,669,216 88,670,430 RGD:1298943
G Hgs hepatocyte growth factor-regulated tyrosine kinase substrate JBrowse link 10 109,638,944 109,657,460 RGD:632855
G Hilpda hypoxia inducible lipid droplet-associated JBrowse link 4 56,547,600 56,550,584 RGD:1624291
G Hspd1 heat shock protein family D (Hsp60) member 1 JBrowse link 9 61,680,529 61,691,202 RGD:1625123
RGD:1624291
G Iapp islet amyloid polypeptide JBrowse link 4 176,509,863 176,517,903 RGD:728955
G Il1b interleukin 1 beta JBrowse link 3 121,876,256 121,882,637 RGD:1624291
RGD:1600115
G Ins1 insulin 1 JBrowse link 1 272,799,784 272,800,351 RGD:1625123
G Ins2 insulin 2 JBrowse link 1 215,856,967 215,858,034 RGD:1625123
RGD:1624291
RGD:2308908
G Klk1 kallikrein 1 JBrowse link 1 100,131,562 100,135,556 RGD:13792537
G Klk11 kallikrein related-peptidase 11 JBrowse link 1 99,712,104 99,716,648 RGD:13792537
G Klk12 kallikrein related-peptidase 12 JBrowse link 1 99,706,148 99,711,004 RGD:13792537
G Klk13 kallikrein related-peptidase 13 JBrowse link 1 99,648,658 99,661,025 RGD:1624291
RGD:13792537
G Klk14 kallikrein related-peptidase 14 JBrowse link 1 99,616,153 99,621,425 RGD:13792537
G Klk15 kallikrein-related peptidase 15 JBrowse link 1 99,393,283 99,401,339 RGD:13792537
G Klk1b3 kallikrein 1-related peptidase B3 JBrowse link 1 100,199,057 100,203,260 RGD:13792537
G Klk1c10 kallikrein 1-related peptidase C10 JBrowse link 1 99,890,294 99,894,353 RGD:13792537
G Klk1c12 kallikrein 1-related peptidase C12 JBrowse link 1 99,298,965 99,303,048 RGD:13792537
G Klk1c2 kallikrein 1-related peptidase C2 JBrowse link 1 99,981,045 99,985,422 RGD:13792537
G Klk1c3 kallikrein 1-related peptidase C3 JBrowse link 1 100,141,205 100,163,945 RGD:13792537
G Klk1c6 kallikrein 1-related peptidase C6 JBrowse link 1 99,947,714 99,964,824 RGD:13792537
G Klk1c8 kallikrein 1-related peptidase C8 JBrowse link 1 99,352,114 99,355,976 RGD:13792537
G Klk1c9 kallikrein 1-related peptidase C9 JBrowse link 1 100,086,520 100,090,406 RGD:13792537
G Klk4 kallikrein-related peptidase 4 JBrowse link 1 99,828,944 99,834,642 RGD:13792537
G Klk5 kallikrein related-peptidase 5 JBrowse link 1 99,781,291 99,793,745 RGD:13792537
G Klk6 kallikrein related-peptidase 6 JBrowse link 1 99,762,195 99,769,486 RGD:13792537
G Klk8 kallikrein related-peptidase 8 JBrowse link 1 99,735,168 99,742,011 RGD:13792537
G Klk9 kallikrein related-peptidase 9 JBrowse link 1 99,729,704 99,733,996 RGD:13792537
G LOC100911689 glandular kallikrein-10-like JBrowse link 1 99,323,893 99,327,978 RGD:13792537
G LOC102553035 kallikrein-15-like JBrowse link 1 100,187,830 100,196,494 RGD:13792537
G LOC103690091 proSAAS JBrowse link X 15,324,261 15,328,617 RGD:1624291
G Ltf lactotransferrin JBrowse link 8 119,290,416 119,313,261 RGD:1624291
G Lyz2 lysozyme 2 JBrowse link 7 60,335,968 60,341,264 RGD:1599861
G Mpo myeloperoxidase JBrowse link 10 75,087,892 75,098,260 RGD:1624291
G Myo5a myosin VA JBrowse link 8 82,038,966 82,156,507 RGD:1298991
RGD:1624291
G Nos1 nitric oxide synthase 1 JBrowse link 12 44,214,949 44,405,530 RGD:13825134
G Nppc natriuretic peptide C JBrowse link 9 93,731,436 93,735,636 RGD:7327142
G Olfm4 olfactomedin 4 JBrowse link 15 62,384,263 62,429,450 RGD:1624291
G Oxt oxytocin/neurophysin I prepropeptide JBrowse link 3 123,106,694 123,107,534 RGD:2304235
RGD:13792537
G Pak2 p21 (RAC1) activated kinase 2 JBrowse link 11 72,829,407 72,865,815 RGD:9835039
G Pam peptidylglycine alpha-amidating monooxygenase JBrowse link 9 111,028,543 111,177,588 RGD:2302421
G Pcsk1 proprotein convertase subtilisin/kexin type 1 JBrowse link 2 91,450,162 91,497,091 RGD:1625123
RGD:2308908
G Pcsk2 proprotein convertase subtilisin/kexin type 2 JBrowse link 3 137,618,891 137,923,385 RGD:2308908
RGD:1625123
G Pcsk5 proprotein convertase subtilisin/kexin type 5 JBrowse link 1 236,031,988 236,313,858 RGD:1624291
G Pla2g1b phospholipase A2 group IB JBrowse link 12 46,879,346 46,890,234 RGD:2303763
G Pla2g2a phospholipase A2 group IIA JBrowse link 5 157,282,650 157,285,295 RGD:2303763
G Plat plasminogen activator, tissue type JBrowse link 16 74,098,263 74,122,897 RGD:1624291
G Pomc proopiomelanocortin JBrowse link 6 28,382,937 28,388,771 RGD:1600115
RGD:1624291
RGD:13792537
G Prl prolactin JBrowse link 17 39,814,236 39,824,299 RGD:1642573
RGD:1624291
G Prss37 serine protease 37 JBrowse link 4 68,337,498 68,349,286 RGD:13792537
G Prss51 serine protease 51 JBrowse link 15 47,453,206 47,459,554 RGD:13792537
G Prss58 serine protease 58 JBrowse link 4 69,145,435 69,152,111 RGD:13792537
G Ptprn protein tyrosine phosphatase, receptor type, N JBrowse link 9 82,446,626 82,462,314 RGD:10402034
G Ptprn2 protein tyrosine phosphatase, receptor type N2 JBrowse link 6 144,384,773 145,133,042 RGD:61724
RGD:1624291
G Rab11fip5 RAB11 family interacting protein 5 JBrowse link 4 117,113,067 117,154,495 RGD:1624291
G Rab12 RAB12, member RAS oncogene family JBrowse link 9 114,683,985 114,709,613 RGD:734515
G Rab27a RAB27A, member RAS oncogene family JBrowse link 8 79,722,334 79,776,228 RGD:1601609
RGD:13792537
RGD:14390061
RGD:1624291
G Rab27b RAB27B, member RAS oncogene family JBrowse link 18 68,486,006 68,644,595 RGD:13792537
G Rab37 RAB37, member RAS oncogene family JBrowse link 10 103,643,841 103,711,830 RGD:1624291
G Rab3a RAB3A, member RAS oncogene family JBrowse link 16 20,435,098 20,439,206 RGD:14390061
G Rab3b RAB3B, member RAS oncogene family JBrowse link 5 128,501,789 128,568,170 RGD:1624291
G Reg3g regenerating family member 3 gamma JBrowse link 4 109,529,679 109,532,234 RGD:1624291
G Resp18 regulated endocrine-specific protein 18 JBrowse link 9 82,470,794 82,477,136 RGD:2303781
G Rnpep arginyl aminopeptidase JBrowse link 13 52,092,863 52,124,006 RGD:2325936
RGD:13792537
G Rph3a rabphilin 3A JBrowse link 12 41,073,296 41,149,799 RGD:2314875
G Rph3al rabphilin 3A-like (without C2 domains) JBrowse link 10 63,989,556 64,140,584 RGD:1601610
G Scg2 secretogranin II JBrowse link 9 85,237,460 85,243,024 RGD:734490
RGD:13792537
RGD:8553933
G Scg5 secretogranin V JBrowse link 3 105,235,065 105,279,475 RGD:1600115
RGD:1624291
G Scgb1a1 secretoglobin family 1A member 1 JBrowse link 1 225,279,698 225,283,246 RGD:5144112
G Slc30a5 solute carrier family 30 member 5 JBrowse link 2 30,815,683 30,845,796 RGD:1624291
G Slc30a8 solute carrier family 30 member 8 JBrowse link 7 91,832,988 91,869,329 RGD:1624291
G Snapin SNAP-associated protein JBrowse link 2 189,878,159 189,880,743 RGD:8554821
G Snx10 sorting nexin 10 JBrowse link 4 81,311,490 81,375,248 RGD:1624291
G Sod1 superoxide dismutase 1 JBrowse link 11 30,363,282 30,368,858 RGD:8655973
G Spaca3 sperm acrosome associated 3 JBrowse link 10 68,227,736 68,235,295 RGD:1624291
G Srgn serglycin JBrowse link 20 32,120,317 32,158,071 RGD:13792537
G Stx1a syntaxin 1A JBrowse link 12 24,682,050 24,710,002 RGD:8554063
G Stx3 syntaxin 3 JBrowse link 1 228,137,781 228,195,004 RGD:1624291
G Stxbp2 syntaxin binding protein 2 JBrowse link 12 2,180,101 2,191,863 RGD:2312427
G Stxbp5 syntaxin binding protein 5 JBrowse link 1 3,858,917 4,011,684 RGD:8554552
G Sypl1 synaptophysin-like 1 JBrowse link 6 52,265,920 52,286,037 RGD:1624291
G Syt1 synaptotagmin 1 JBrowse link 7 50,084,063 50,638,996 RGD:7241274
RGD:1624291
G Syt9 synaptotagmin 9 JBrowse link 1 171,592,703 171,769,780 RGD:7241274
G Sytl4 synaptotagmin-like 4 JBrowse link X 104,763,961 104,814,152 RGD:1624291
RGD:1600115
G Tff3 trefoil factor 3 JBrowse link 20 9,850,800 9,855,481 RGD:1624291
RGD:1600115
G Tgfb1 transforming growth factor, beta 1 JBrowse link 1 82,480,875 82,497,196 RGD:1601584
G Tgfb2 transforming growth factor, beta 2 JBrowse link 13 105,039,639 105,142,010 RGD:1579782
G Tgfb3 transforming growth factor, beta 3 JBrowse link 6 109,913,757 109,936,217 RGD:1601584
G Thbs1 thrombospondin 1 JBrowse link 3 109,862,120 109,873,466 RGD:1624291
G Tmprss4 transmembrane serine protease 4 JBrowse link 8 49,469,804 49,503,304 RGD:1624291
G Tor1a torsin family 1, member A JBrowse link 3 9,800,322 9,807,318 RGD:8554821
G Trh thyrotropin releasing hormone JBrowse link 4 124,110,716 124,113,242 RGD:1600428
RGD:13792537
G Tryx5 trypsin X5 JBrowse link 4 69,156,269 69,164,906 RGD:13792537
G Vamp2 vesicle-associated membrane protein 2 JBrowse link 10 55,675,171 55,679,405 RGD:8554063
RGD:1624291
G Vamp3 vesicle-associated membrane protein 3 JBrowse link 5 168,126,157 168,136,628 RGD:1624291
G Vamp7 vesicle-associated membrane protein 7 JBrowse link 12 18,996,566 19,033,714 RGD:1624291
G Vamp8 vesicle-associated membrane protein 8 JBrowse link 4 100,250,301 100,252,756 RGD:1624291
G Vegfa vascular endothelial growth factor A JBrowse link 9 17,340,341 17,355,681 RGD:1624291
secretory granule lumen term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dbh dopamine beta-hydroxylase JBrowse link 3 5,709,236 5,731,895 RGD:1600115
RGD:1624291
G Grp gastrin releasing peptide JBrowse link 18 61,563,458 61,576,818 RGD:1600115
G Pcsk1 proprotein convertase subtilisin/kexin type 1 JBrowse link 2 91,450,162 91,497,091 RGD:1600115
G Pcsk2 proprotein convertase subtilisin/kexin type 2 JBrowse link 3 137,618,891 137,923,385 RGD:1600115
G Serpini1 serpin family I member 1 JBrowse link 2 174,013,058 174,111,693 RGD:1624291
secretory granule membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AABR07062512.1 RGD:13792537
G Ca4 carbonic anhydrase 4 JBrowse link 10 72,272,286 72,281,069 RGD:1624291
RGD:1600115
G Cd177 CD177 molecule JBrowse link 1 82,964,683 82,987,306 RGD:1624291
G Cd38 CD38 molecule JBrowse link 14 71,714,768 71,754,990 RGD:13506922
G Cpe carboxypeptidase E JBrowse link 16 26,906,716 27,014,811 RGD:6483330
RGD:1600115
RGD:1624291
G Dbh dopamine beta-hydroxylase JBrowse link 3 5,709,236 5,731,895 RGD:1600115
RGD:13792537
RGD:1624291
G Ica1 islet cell autoantigen 1 JBrowse link 4 34,635,509 34,780,187 RGD:1624291
RGD:1600115
G Itpr1 inositol 1,4,5-trisphosphate receptor, type 1 JBrowse link 4 140,247,297 140,580,749 RGD:1582340
RGD:13792537
G Itpr2 inositol 1,4,5-trisphosphate receptor, type 2 JBrowse link 4 180,423,452 180,800,088 RGD:13792537
G Itpr3 inositol 1,4,5-trisphosphate receptor, type 3 JBrowse link 20 5,645,894 5,711,702 RGD:13792537
G Moxd1 monooxygenase, DBH-like 1 JBrowse link 1 22,124,498 22,206,565 RGD:13792537
G Moxd2 monooxygenase, DBH-like 2 JBrowse link 4 69,117,477 69,125,972 RGD:13792537
G Msn moesin JBrowse link X 65,226,834 65,294,192 RGD:727296
G Myrip myosin VIIA and Rab interacting protein JBrowse link 8 128,972,307 129,139,257 RGD:4892230
G Pam peptidylglycine alpha-amidating monooxygenase JBrowse link 9 111,028,543 111,177,588 RGD:6483559
G Ptprn2 protein tyrosine phosphatase, receptor type N2 JBrowse link 6 144,384,773 145,133,042 RGD:1624291
RGD:1600115
G Rab26 RAB26, member RAS oncogene family JBrowse link 10 13,894,271 13,898,578 RGD:1624291
RGD:1600115
G Rab27a RAB27A, member RAS oncogene family JBrowse link 8 79,722,334 79,776,228 RGD:1601610
G Rab27b RAB27B, member RAS oncogene family JBrowse link 18 68,486,006 68,644,595 RGD:1601610
G Rph3al rabphilin 3A-like (without C2 domains) JBrowse link 10 63,989,556 64,140,584 RGD:1601610
G Scg3 secretogranin III JBrowse link 8 82,582,352 82,641,536 RGD:1600115
RGD:1624291
G Sycn syncollin JBrowse link 1 85,219,827 85,220,239 RGD:634177
RGD:13792537
G Syt4 synaptotagmin 4 JBrowse link 18 24,172,580 24,181,989 RGD:11535113
G Syt9 synaptotagmin 9 JBrowse link 1 171,592,703 171,769,780 RGD:2311147
G Sytl4 synaptotagmin-like 4 JBrowse link X 104,763,961 104,814,152 RGD:4892230
G Tcirg1 T-cell immune regulator 1, ATPase H+ transporting V0 subunit A3 JBrowse link 1 219,126,687 219,139,466 RGD:1624291
G Tmed10 transmembrane p24 trafficking protein 10 JBrowse link 6 109,169,739 109,205,004 RGD:1624291
RGD:1600115
G Tmem184a transmembrane protein 184A JBrowse link 12 16,906,863 16,924,143 RGD:1624291
RGD:1600115
G Vamp2 vesicle-associated membrane protein 2 JBrowse link 10 55,675,171 55,679,405 RGD:1624291
G Vamp7 vesicle-associated membrane protein 7 JBrowse link 12 18,996,566 19,033,714 RGD:1624291
G Vamp8 vesicle-associated membrane protein 8 JBrowse link 4 100,250,301 100,252,756 RGD:1624291
G Vgf VGF nerve growth factor inducible JBrowse link 12 22,677,302 22,680,630 RGD:2289058
specific granule term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AABR07053516.1 RGD:1600115
G Adam8 ADAM metallopeptidase domain 8 JBrowse link 1 212,317,510 212,332,895 RGD:1624291
G Anxa11 annexin A11 JBrowse link 16 3,867,193 3,912,043 RGD:1624291
G Anxa3 annexin A3 JBrowse link 14 14,371,921 14,426,503 RGD:1624291
G Camp cathelicidin antimicrobial peptide JBrowse link 8 117,930,557 117,932,371 RGD:1624291
RGD:13792537
G Clcn3 chloride voltage-gated channel 3 JBrowse link 16 32,448,821 32,520,649 RGD:1624291
RGD:1600115
G Crisp3 cysteine-rich secretory protein 3 JBrowse link 9 24,047,405 24,088,066 RGD:1624291
G Ltf lactotransferrin JBrowse link 8 119,290,416 119,313,261 RGD:1624291
G Ngp neutrophilic granule protein JBrowse link 8 118,662,335 118,665,699 RGD:13792537
G Olfm4 olfactomedin 4 JBrowse link 15 62,384,263 62,429,450 RGD:1624291
G Snap23 synaptosome associated protein 23 JBrowse link 3 112,333,972 112,362,960 RGD:1624291
G Stx3 syntaxin 3 JBrowse link 1 228,137,781 228,195,004 RGD:1624291
G Stx4 syntaxin 4 JBrowse link 1 199,287,384 199,295,606 RGD:1600115
RGD:1624291
G Stxbp2 syntaxin binding protein 2 JBrowse link 12 2,180,101 2,191,863 RGD:1600115
RGD:1624291
G Stxbp3 syntaxin binding protein 3 JBrowse link 2 211,595,763 211,638,756 RGD:1624291
specific granule membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Vamp1 vesicle-associated membrane protein 1 JBrowse link 4 157,726,941 157,733,644 RGD:1624291
synaptic vesicle term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AABR07002683.1 RGD:13792537
G AABR07043288.1 RGD:13792537
G Adam10 ADAM metallopeptidase domain 10 JBrowse link 8 77,107,355 77,237,483 RGD:13782154
G Amph amphiphysin JBrowse link 17 48,304,324 48,562,838 RGD:1624291
RGD:13792537
G Anxa5 annexin A5 JBrowse link 2 123,162,477 123,194,730 RGD:10053658
G Ap2a2 adaptor related protein complex 2 subunit alpha 2 JBrowse link 1 214,534,217 214,607,497 RGD:13452390
G Apba1 amyloid beta precursor protein binding family A member 1 JBrowse link 1 241,594,565 241,796,512 RGD:1600115
G Apba2 amyloid beta precursor protein binding family A member 2 JBrowse link 1 125,367,273 125,547,741 RGD:1600115
G Aph1a aph-1 homolog A, gamma secretase subunit JBrowse link 2 198,006,247 198,009,837 RGD:13702254
G App amyloid beta precursor protein JBrowse link 11 24,425,013 24,641,872 RGD:8661630
RGD:1624291
G Atg9a autophagy related 9A JBrowse link 9 82,382,800 82,393,429 RGD:13702180
G Atp6v0a1 ATPase H+ transporting V0 subunit a1 JBrowse link 10 88,914,264 88,967,736 RGD:12050113
G Atp6v0c ATPase H+ transporting V0 subunit C JBrowse link 10 13,537,031 13,543,407 RGD:2301258
G Atp6v0d1 ATPase H+ transporting V0 subunit D1 JBrowse link 19 37,481,782 37,525,762 RGD:2301259
G Atp6v1b1 ATPase H+ transporting V1 subunit B1 JBrowse link 4 115,417,100 115,435,754 RGD:12050113
G Atp6v1g1 ATPase H+ transporting V1 subunit G1 JBrowse link 5 79,367,663 79,373,843 RGD:1624291
G Bace1 beta-secretase 1 JBrowse link 8 50,140,092 50,162,388 RGD:13782154
G Bdnf brain-derived neurotrophic factor JBrowse link 3 100,768,637 100,819,216 RGD:1600576
RGD:13792537
G Bin1 bridging integrator 1 JBrowse link 18 25,163,575 25,222,139 RGD:631926
RGD:13792537
G Brsk1 BR serine/threonine kinase 1 JBrowse link 1 72,701,281 72,727,061 RGD:8553864
G Bsn bassoon (presynaptic cytomatrix protein) JBrowse link 8 116,873,721 116,965,396 RGD:13792549
G Btbd8 BTB domain containing 8 JBrowse link 14 3,282,422 3,351,740 RGD:13601995
G Cadm1 cell adhesion molecule 1 JBrowse link 8 51,858,906 52,200,591 RGD:1624291
G Cadps2 calcium dependent secretion activator 2 JBrowse link 4 50,326,447 50,861,161 RGD:1624291
G Cdk16 cyclin-dependent kinase 16 JBrowse link X 1,707,285 1,718,821 RGD:8553541
RGD:13792537
RGD:1624291
RGD:1600115
G Clcn3 chloride voltage-gated channel 3 JBrowse link 16 32,448,821 32,520,649 RGD:1624291
RGD:13792537
RGD:1600115
RGD:10047235
G Clcn4 chloride voltage-gated channel 4 JBrowse link X 25,016,177 25,082,563 RGD:13792537
G Clcn5 chloride voltage-gated channel 5 JBrowse link X 16,170,585 16,196,691 RGD:13792537
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin JBrowse link 1 197,986,384 197,999,726 RGD:1600115
RGD:1624291
G Cops4 COP9 signalosome subunit 4 JBrowse link 14 10,718,863 10,749,134 RGD:8554353
RGD:1624291
G Cops5 COP9 signalosome subunit 5 JBrowse link 5 8,876,090 8,894,345 RGD:1624291
G Cttnbp2 cortactin binding protein 2 JBrowse link 4 42,932,897 43,096,454 RGD:632437
G Cyp19a1 cytochrome P450, family 19, subfamily a, polypeptide 1 JBrowse link 8 58,744,849 58,772,408 RGD:1600839
G Dbi diazepam binding inhibitor, acyl-CoA binding protein JBrowse link 13 36,147,667 36,156,076 RGD:8554614
G Ddc dopa decarboxylase JBrowse link 14 91,905,919 91,996,816 RGD:5128868
G Dgki diacylglycerol kinase, iota JBrowse link 4 64,365,115 64,831,473 RGD:8554416
G Disc1 DISC1 scaffold protein JBrowse link 19 57,818,838 58,069,992 RGD:1624291
G Dlg4 discs large MAGUK scaffold protein 4 JBrowse link 10 56,625,845 56,655,543 RGD:1624291
RGD:1600115
G Dmxl2 Dmx-like 2 JBrowse link 8 58,932,575 59,077,788 RGD:1624291
RGD:11058596
G Dnajc5 DnaJ heat shock protein family (Hsp40) member C5 JBrowse link 3 177,012,714 177,047,787 RGD:1624291
G Dnm1 dynamin 1 JBrowse link 3 11,338,081 11,382,043 RGD:8554278
G Entpd1 ectonucleoside triphosphate diphosphohydrolase 1 JBrowse link 1 259,692,020 259,818,922 RGD:9685450
G Erc1 ELKS/RAB6-interacting/CAST family member 1 JBrowse link 4 152,087,393 152,380,023 RGD:13601985
G Exoc4 exocyst complex component 4 JBrowse link 4 60,549,128 61,358,305 RGD:12050113
G Gabbr1 gamma-aminobutyric acid type B receptor subunit 1 JBrowse link 20 1,955,344 1,984,907 RGD:2315465
G Gipc1 GIPC PDZ domain containing family, member 1 JBrowse link 19 24,786,604 24,798,231 RGD:1624291
G Gnas GNAS complex locus JBrowse link 3 172,374,957 172,434,988 RGD:1600115
G Gria1 glutamate ionotropic receptor AMPA type subunit 1 JBrowse link 10 42,441,723 42,760,200 RGD:1624291
RGD:1600115
G Gria2 glutamate ionotropic receptor AMPA type subunit 2 JBrowse link 2 179,584,302 179,704,629 RGD:1624291
G Grin1 glutamate ionotropic receptor NMDA type subunit 1 JBrowse link 3 2,507,745 2,534,664 RGD:1624291
RGD:1600115
G Grin2a glutamate ionotropic receptor NMDA type subunit 2A JBrowse link 10 5,707,806 6,123,568 RGD:1624291
RGD:1600115
G Grin2b glutamate ionotropic receptor NMDA type subunit 2B JBrowse link 4 169,541,620 170,000,216 RGD:1624291
G Hap1 huntingtin-associated protein 1 JBrowse link 10 88,257,975 88,266,210 RGD:1600115
G Hspa8 heat shock protein family A (Hsp70) member 8 JBrowse link 8 44,989,401 44,993,261 RGD:5130974
G Htr7 5-hydroxytryptamine receptor 7 JBrowse link 1 254,547,964 254,671,811 RGD:6480682
G Kcnc4 potassium voltage-gated channel subfamily C member 4 JBrowse link 2 210,220,908 210,241,447 RGD:10411903
G Kcnk9 potassium two pore domain channel subfamily K member 9 JBrowse link 7 113,894,918 113,938,397 RGD:2316531
G Kif1a kinesin family member 1A JBrowse link 9 100,171,851 100,253,626 RGD:12911232
G Kif1b kinesin family member 1B JBrowse link 5 165,994,803 166,133,497 RGD:1600115
G Kif3c kinesin family member 3C JBrowse link 6 27,768,943 27,815,611 RGD:729208
G Kirrel3 kirre like nephrin family adhesion molecule 3 JBrowse link 8 35,692,525 36,254,755 RGD:1600115
RGD:1624291
G Lamp1 lysosomal-associated membrane protein 1 JBrowse link 16 81,689,576 81,714,341 RGD:1624291
G Lgi3 leucine-rich repeat LGI family, member 3 JBrowse link 15 52,220,578 52,227,706 RGD:1624291
G LOC100910446 syntaxin-7-like JBrowse link 1 23,542,376 23,560,911 RGD:13792537
G LOC103690878 syntaxin-3-like JBrowse link X 79,742,224 79,743,117 RGD:13792537
G Lrrk2 leucine-rich repeat kinase 2 JBrowse link 7 132,857,311 133,018,549 RGD:1624291
G Madd MAP-kinase activating death domain JBrowse link 3 79,960,301 80,003,023 RGD:1354686
G Marcksl1 MARCKS-like 1 JBrowse link 5 147,714,163 147,716,486 RGD:13702350
G Mff mitochondrial fission factor JBrowse link 9 88,490,280 88,518,517 RGD:12793033
G Mme membrane metallo-endopeptidase JBrowse link 2 153,799,203 153,880,910 RGD:1624291
RGD:1600115
G Mt3 metallothionein 3 JBrowse link 19 11,324,708 11,326,112 RGD:9685810
RGD:1600115
RGD:1624291
G Mtmr2 myotubularin related protein 2 JBrowse link 8 12,283,471 12,334,014 RGD:8553482
G Mylk2 myosin light chain kinase 2 JBrowse link 3 148,386,185 148,397,851 RGD:1600505
G Myo5a myosin VA JBrowse link 8 82,038,966 82,156,507 RGD:1581734
G Ncstn nicastrin JBrowse link 13 90,451,046 90,467,256 RGD:13702254
RGD:1624291
G Ndel1 nudE neurodevelopment protein 1-like 1 JBrowse link 10 55,398,919 55,456,654 RGD:1624291
G Ngf nerve growth factor JBrowse link 2 204,886,158 204,939,523 RGD:13792537
G Npy1r neuropeptide Y receptor Y1 JBrowse link 16 24,779,480 24,789,131 RGD:1642318
G Ntf3 neurotrophin 3 JBrowse link 4 158,636,883 158,705,886 RGD:13792537
G Ntf4 neurotrophin 4 JBrowse link 1 101,405,314 101,408,145 RGD:13792537
G Pde4b phosphodiesterase 4B JBrowse link 5 121,759,236 122,136,814 RGD:1624291
RGD:1600115
G Pdyn prodynorphin JBrowse link 3 122,194,327 122,206,671 RGD:13702229
G Pebp1 phosphatidylethanolamine binding protein 1 JBrowse link 12 45,026,948 45,031,148 RGD:2302814
G Picalm phosphatidylinositol binding clathrin assembly protein JBrowse link 1 154,377,229 154,458,966 RGD:8554206
RGD:13792537
G Pick1 protein interacting with PRKCA 1 JBrowse link 7 120,465,472 120,484,824 RGD:8554504
RGD:13792537
G Ppt1 palmitoyl-protein thioesterase 1 JBrowse link 5 140,538,260 140,558,163 RGD:633701
RGD:8553248
RGD:1624291
G Prkn parkin RBR E3 ubiquitin protein ligase JBrowse link 1 48,880,015 50,069,998 RGD:1599938
G Prrt2 proline-rich transmembrane protein 2 JBrowse link 1 198,451,042 198,454,998 RGD:1600115
RGD:1624291
G Psen1 presenilin 1 JBrowse link 6 107,169,514 107,221,000 RGD:13702254
G Psen2 presenilin 2 JBrowse link 13 98,513,600 98,539,347 RGD:13702254
G Ptpn5 protein tyrosine phosphatase, non-receptor type 5 JBrowse link 1 103,197,918 103,258,309 RGD:11574252
G Ptprn protein tyrosine phosphatase, receptor type, N JBrowse link 9 82,446,626 82,462,314 RGD:10402034
G Rab10 RAB10, member RAS oncogene family JBrowse link 6 27,668,387 27,721,120 RGD:13792537
G Rab11b RAB11B, member RAS oncogene family JBrowse link 7 18,598,991 18,612,132 RGD:8554199
RGD:12050113
G Rab12 RAB12, member RAS oncogene family JBrowse link 9 114,683,985 114,709,613 RGD:13792537
G Rab13 RAB13, member RAS oncogene family JBrowse link 2 189,581,209 189,586,358 RGD:13792537
G Rab15 RAB15, member RAS oncogene family JBrowse link 6 99,845,952 99,870,320 RGD:13792537
G Rab3a RAB3A, member RAS oncogene family JBrowse link 16 20,435,098 20,439,206 RGD:2306269
RGD:14397552
RGD:13792537
RGD:1624291
RGD:12050113
RGD:8693376
G Rab3b RAB3B, member RAS oncogene family JBrowse link 5 128,501,789 128,568,170 RGD:1624291
RGD:13792537
G Rab3c RAB3C, member RAS oncogene family JBrowse link 2 41,570,955 41,786,681 RGD:1624291
RGD:13792537
G Rab3d RAB3D, member RAS oncogene family JBrowse link 8 22,920,238 22,929,368 RGD:13792537
G Rab40b Rab40b, member RAS oncogene family JBrowse link 10 110,557,798 110,585,424 RGD:13792537
G Rab40c Rab40c, member RAS oncogene family JBrowse link 10 15,247,913 15,283,111 RGD:13792537
G Rab5a RAB5A, member RAS oncogene family JBrowse link 9 5,910 6,065 RGD:2306269
RGD:13792537
RGD:12050113
G Rab5al1 Rab5a, member RAS oncogene family-like 1 JBrowse link 14 72,889,022 72,891,156 RGD:2306269
RGD:13792537
RGD:12050113
G Rab8a RAB8A, member RAS oncogene family JBrowse link 16 19,355,047 19,376,776 RGD:13792537
G Rab8b RAB8B, member RAS oncogene family JBrowse link 8 72,641,680 72,714,646 RGD:13792537
G Rabac1 Rab acceptor 1 JBrowse link 1 81,843,667 81,846,765 RGD:1600115
G Rnf112 ring finger protein 112 JBrowse link 10 47,719,034 47,726,050 RGD:1600115
RGD:1624291
G Rogdi rogdi atypical leucine zipper JBrowse link 10 10,761,477 10,766,096 RGD:1600115
G Rph3a rabphilin 3A JBrowse link 12 41,073,296 41,149,799 RGD:2314877
RGD:14397552
RGD:2314902
G Scamp5 secretory carrier membrane protein 5 JBrowse link 8 62,221,820 62,266,269 RGD:68303
G Sec22b SEC22 homolog B, vesicle trafficking protein JBrowse link 2 200,076,079 200,096,861 RGD:12050113
G Septin1 septin 1 JBrowse link 1 198,658,744 198,662,610 RGD:13792537
G Septin4 septin 4 JBrowse link 10 74,860,068 74,884,196 RGD:13792537
G Septin5 septin 5 JBrowse link 11 86,516,377 86,522,169 RGD:1302866
RGD:13792537
RGD:1600115
RGD:1624291
G Septin6 septin 6 JBrowse link X 123,524,954 123,601,214 RGD:1624291
G Sh3glb1 SH3 domain -containing GRB2-like endophilin B1 JBrowse link 2 250,709,812 250,744,216 RGD:13504749
G Shh sonic hedgehog signaling molecule JBrowse link 4 718,538 727,691 RGD:12880019
G Slc17a6 solute carrier family 17 member 6 JBrowse link 1 106,980,463 107,038,717 RGD:628484
RGD:2324694
RGD:9999204
RGD:1624291
G Slc17a7 solute carrier family 17 member 7 JBrowse link 1 101,161,265 101,172,292 RGD:1624291
G Slc17a8 solute carrier family 17 member 8 JBrowse link 7 30,215,231 30,274,993 RGD:1624291
G Slc18a2 solute carrier family 18 member A2 JBrowse link 1 280,397,831 280,457,968 RGD:2317337
RGD:5128868
G Slc18a3 solute carrier family 18 member A3 JBrowse link 16 8,682,668 8,685,529 RGD:2317428
G Slc2a8 solute carrier family 2 member 8 JBrowse link 3 12,020,227 12,029,920 RGD:70577
G Slc30a3 solute carrier family 30 member 3 JBrowse link 6 26,629,752 26,650,106 RGD:1624291
RGD:1600115
G Slc32a1 solute carrier family 32 member 1 JBrowse link 3 155,102,980 155,107,815 RGD:2324694
RGD:10047235
RGD:9999204
G Slc40a1 solute carrier family 40 member 1 JBrowse link 9 52,819,451 52,830,461 RGD:1624291
G Slc4a8 solute carrier family 4 member 8 JBrowse link 7 142,397,352 142,467,398 RGD:15090838
G Slc5a7 solute carrier family 5 member 7 JBrowse link 9 5,294,377 5,330,822 RGD:9999388
G Slc6a17 solute carrier family 6 member 17 JBrowse link 2 210,249,663 210,299,770 RGD:8553691
RGD:13792537
RGD:8554196
G Snap25 synaptosome associated protein 25 JBrowse link 3 129,697,408 129,788,417 RGD:1624291
RGD:1600115
G Snap91 synaptosome associated protein 91 JBrowse link 8 94,447,558 94,564,772 RGD:8554206
RGD:13792537
G Snapin SNAP-associated protein JBrowse link 2 189,878,159 189,880,743 RGD:1624291
RGD:13792537
RGD:13702160
G Snca synuclein alpha JBrowse link 4 90,782,412 90,883,236 RGD:2291826
G Sphk1 sphingosine kinase 1 JBrowse link 10 105,498,728 105,504,401 RGD:2311366
G Sptbn2 spectrin, beta, non-erythrocytic 2 JBrowse link 1 219,964,429 220,006,811 RGD:70020
G Ston2 stonin 2 JBrowse link 6 115,398,586 115,547,552 RGD:1624291
G Stx11 syntaxin 11 JBrowse link 1 7,039,160 7,064,870 RGD:13792537
G Stx12 syntaxin 12 JBrowse link 5 151,044,050 151,072,893 RGD:12050113
RGD:13792537
G Stx1a syntaxin 1A JBrowse link 12 24,682,050 24,710,002 RGD:1624291
RGD:13792537
G Stx2 syntaxin 2 JBrowse link 12 31,324,203 31,360,249 RGD:13792537
G Stx3 syntaxin 3 JBrowse link 1 228,137,781 228,195,004 RGD:1624291
RGD:13792537
G Stx4 syntaxin 4 JBrowse link 1 199,287,384 199,295,606 RGD:13792537
G Stx6 syntaxin 6 JBrowse link 13 72,804,218 72,850,757 RGD:12050113
RGD:13792537
G Stx7 syntaxin 7 JBrowse link 1 22,241,655 22,281,850 RGD:13792537
G Stxbp5 syntaxin binding protein 5 JBrowse link 1 3,858,917 4,011,684 RGD:12050113
G Sv2a synaptic vesicle glycoprotein 2a JBrowse link 2 198,321,100 198,336,889 RGD:12050113
RGD:1624291
G Sv2b synaptic vesicle glycoprotein 2b JBrowse link 1 136,664,199 136,842,247 RGD:634183
RGD:1624291
G Sv2c synaptic vesicle glycoprotein 2c JBrowse link 2 26,495,757 26,707,691 RGD:634114
RGD:1624291
G Svop SV2 related protein JBrowse link 12 48,292,272 48,351,974 RGD:634114
G Syn1 synapsin I JBrowse link X 1,321,315 1,379,202 RGD:8553593
RGD:12050113
G Syn2 synapsin II JBrowse link 4 147,037,179 147,195,096 RGD:70028
RGD:8553593
G Syn3 synapsin III JBrowse link 7 23,403,896 23,808,602 RGD:8553593
G Syngr1 synaptogyrin 1 JBrowse link 7 121,311,008 121,334,437 RGD:8554439
G Syngr2 synaptogyrin 2 JBrowse link 10 106,812,740 106,816,675 RGD:1624291
RGD:634131
RGD:1600115
G Syngr3 synaptogyrin 3 JBrowse link 10 14,051,413 14,056,169 RGD:1624291
G Synpr synaptoporin JBrowse link 15 14,558,613 14,885,790 RGD:1600115
G Syp synaptophysin JBrowse link X 15,694,699 15,709,244 RGD:8554439
RGD:1624291
RGD:12050136
RGD:634537
G Syt1 synaptotagmin 1 JBrowse link 7 50,084,063 50,638,996 RGD:8553826
RGD:1624291
RGD:12050113
G Syt11 synaptotagmin 11 JBrowse link 2 188,112,301 188,138,180 RGD:11079184
RGD:1624291
RGD:1600115
G Syt12 synaptotagmin 12 JBrowse link 1 219,690,013 219,719,359 RGD:10047304
RGD:1624291
G Syt2 synaptotagmin 2 JBrowse link 13 51,569,248 51,577,824 RGD:1600115
G Syt4 synaptotagmin 4 JBrowse link 18 24,172,580 24,181,989 RGD:730180
RGD:1624291
RGD:11535095
G Syt7 synaptotagmin 7 JBrowse link 1 226,435,816 226,498,008 RGD:1624291
RGD:13792537
RGD:1600115
G Th tyrosine hydroxylase JBrowse link 1 216,073,034 216,080,287 RGD:1580025
RGD:5128868
G Tmed9 transmembrane p24 trafficking protein 9 JBrowse link 17 9,560,735 9,565,249 RGD:1624291
G Tmem230 transmembrane protein 230 JBrowse link 3 124,870,867 124,879,274 RGD:1624291
RGD:1600115
G Tor1a torsin family 1, member A JBrowse link 3 9,800,322 9,807,318 RGD:8554353
RGD:1624291
G Tprg1l tumor protein p63 regulated 1-like JBrowse link 5 171,456,299 171,459,488 RGD:8554155
RGD:13792549
RGD:13792537
G Trappc4 trafficking protein particle complex 4 JBrowse link 8 48,723,755 48,727,182 RGD:1600115
RGD:1624291
G Trim9 tripartite motif-containing 9 JBrowse link 6 92,660,026 92,760,036 RGD:631246
G Vamp2 vesicle-associated membrane protein 2 JBrowse link 10 55,675,171 55,679,405 RGD:634537
RGD:12050113
RGD:1624291
G Vamp4 vesicle-associated membrane protein 4 JBrowse link 13 80,460,699 80,483,597 RGD:12050136
G Vamp7 vesicle-associated membrane protein 7 JBrowse link 12 18,996,566 19,033,714 RGD:12050113
G Vdac1 voltage-dependent anion channel 1 JBrowse link 10 37,724,915 37,752,827 RGD:10003050
G Vdac2 voltage-dependent anion channel 2 JBrowse link 15 2,634,622 2,648,548 RGD:10003050
G Vdac3 voltage-dependent anion channel 3 JBrowse link 16 74,292,466 74,308,910 RGD:10003050
G Vps33b VPS33B, late endosome and lysosome associated JBrowse link 1 142,060,955 142,083,955 RGD:12050113
G Vps45 vacuolar protein sorting 45 homolog JBrowse link 2 198,123,747 198,184,739 RGD:13702180
G Vti1a vesicle transport through interaction with t-SNAREs 1A JBrowse link 1 276,310,072 276,508,635 RGD:634537
G Vti1a_v1 vesicle transport through interaction with t-SNAREs 1A, variant 1 RGD:634537
G Vti1b vesicle transport through interaction with t-SNAREs 1B JBrowse link 6 102,340,261 102,353,612 RGD:634537
G Wdr7 WD repeat domain 7 JBrowse link 18 59,096,636 59,396,312 RGD:1354686
synaptic vesicle lumen term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Penk proenkephalin JBrowse link 5 17,056,412 17,061,762 RGD:13702175
synaptic vesicle membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abcc8 ATP binding cassette subfamily C member 8 JBrowse link 1 102,110,708 102,191,287 RGD:1549870
G Bcl2l1 Bcl2-like 1 JBrowse link 3 148,259,594 148,314,191 RGD:12793033
G Borcs5 BLOC-1 related complex subunit 5 JBrowse link 4 168,396,034 168,466,968 RGD:13792537
G Bsn bassoon (presynaptic cytomatrix protein) JBrowse link 8 116,873,721 116,965,396 RGD:1600115
G Calm1 calmodulin 1 JBrowse link 6 124,217,241 124,225,292 RGD:12793033
G Calm2 calmodulin 2 JBrowse link 6 11,067,675 11,080,078 RGD:12793033
G Calm3 calmodulin 3 JBrowse link 1 78,844,520 78,851,628 RGD:12793033
G Clta clathrin, light chain A JBrowse link 5 59,490,689 59,509,139 RGD:12793033
RGD:13792537
RGD:13702292
G Cltb clathrin, light chain B JBrowse link 17 10,537,348 10,554,999 RGD:13702292
RGD:13792537
G Dmd dystrophin JBrowse link X 51,149,358 53,519,271 RGD:12880362
G Dnm1l dynamin 1-like JBrowse link 11 88,830,968 88,882,271 RGD:12793033
G Drd2 dopamine receptor D2 JBrowse link 8 53,678,777 53,743,643 RGD:2311574
RGD:13792537
G Drd3 dopamine receptor D3 JBrowse link 11 61,819,102 61,883,223 RGD:13792537
G Dtnbp1 dystrobrevin binding protein 1 JBrowse link 17 20,090,136 20,182,332 RGD:8554107
RGD:1600115
RGD:1624291
G Gad2 glutamate decarboxylase 2 JBrowse link 17 89,171,576 89,234,770 RGD:1625237
G Gria2 glutamate ionotropic receptor AMPA type subunit 2 JBrowse link 2 179,584,302 179,704,629 RGD:728773
G Ica1 islet cell autoantigen 1 JBrowse link 4 34,635,509 34,780,187 RGD:1600115
RGD:1624291
G Lamp5 lysosomal-associated membrane protein family, member 5 JBrowse link 3 129,012,677 129,031,522 RGD:1600115
G LOC102556337 mitochondrial fission factor-like JBrowse link 9 90,880,586 90,908,848 RGD:12793033
G LOC500460 similar to olfactory receptor Olr841 JBrowse link 5 64,614,755 64,615,714 RGD:13792537
G Mctp1 multiple C2 and transmembrane domain containing 1 JBrowse link 2 3,400,883 4,089,949 RGD:13210552
RGD:13792537
G Mctp2 multiple C2 and transmembrane domain containing 2 JBrowse link 1 133,324,881 133,559,644 RGD:13792537
G Mff mitochondrial fission factor JBrowse link 9 88,490,280 88,518,517 RGD:12793033
G Olr1257 olfactory receptor 1257 JBrowse link 8 42,429,993 42,430,928 RGD:13792537
G Olr1320 olfactory receptor 1320 JBrowse link 8 43,628,182 43,629,120 RGD:13792537
G Olr533 olfactory receptor 533 JBrowse link 3 74,574,075 74,575,010 RGD:13792537
G Olr841 olfactory receptor 841 JBrowse link 5 64,621,407 64,622,359 RGD:13792537
G Otof otoferlin JBrowse link 6 27,328,343 27,424,864 RGD:1624291
RGD:13792537
RGD:1600115
G Pi4k2a phosphatidylinositol 4-kinase type 2 alpha JBrowse link 1 261,337,594 261,362,509 RGD:2306405
G Prkn parkin RBR E3 ubiquitin protein ligase JBrowse link 1 48,880,015 50,069,998 RGD:10413884
G Prrt2 proline-rich transmembrane protein 2 JBrowse link 1 198,451,042 198,454,998 RGD:1600115
G Ptprn2 protein tyrosine phosphatase, receptor type N2 JBrowse link 6 144,384,773 145,133,042 RGD:1624291
RGD:1600115
G RGD621098 similar to RIKEN cDNA D230025D16Rik JBrowse link 19 37,179,850 37,207,714 RGD:1302287
RGD:13792537
G Rph3a rabphilin 3A JBrowse link 12 41,073,296 41,149,799 RGD:729719
G Scamp1 secretory carrier membrane protein 1 JBrowse link 2 23,858,021 23,941,128 RGD:1624291
RGD:1600115
G Sema4c semaphorin 4C JBrowse link 9 43,129,413 43,140,442 RGD:1624291
G Septin8 septin 8 JBrowse link 10 38,877,422 38,906,480 RGD:1600115
G Sh3gl2 SH3 domain containing GRB2 like 2, endophilin A1 JBrowse link 5 103,479,767 103,654,507 RGD:10047209
G Slc17a6 solute carrier family 17 member 6 JBrowse link 1 106,980,463 107,038,717 RGD:13792537
G Slc17a7 solute carrier family 17 member 7 JBrowse link 1 101,161,265 101,172,292 RGD:1624291
RGD:13792537
RGD:9999204
G Slc17a8 solute carrier family 17 member 8 JBrowse link 7 30,215,231 30,274,993 RGD:1624291
RGD:13792537
G Slc18a1 solute carrier family 18 member A1 JBrowse link 16 22,358,646 22,395,183 RGD:13792537
G Slc18a2 solute carrier family 18 member A2 JBrowse link 1 280,397,831 280,457,968 RGD:5130996
RGD:13792537
G Slc2a3 solute carrier family 2 member 3 JBrowse link 4 155,549,991 155,626,018 RGD:1642814
G Slc30a3 solute carrier family 30 member 3 JBrowse link 6 26,629,752 26,650,106 RGD:1624291
G Slc9b2 solute carrier family 9 member B2 JBrowse link 2 240,485,254 240,519,166 RGD:1624291
RGD:1600115
G Snap47 synaptosome associated protein 47 JBrowse link 10 45,757,196 45,798,734 RGD:1624291
G Snapin SNAP-associated protein JBrowse link 2 189,878,159 189,880,743 RGD:1600115
G Snca synuclein alpha JBrowse link 4 90,782,412 90,883,236 RGD:1624291
G Stx1a syntaxin 1A JBrowse link 12 24,682,050 24,710,002 RGD:1624291
RGD:1549870
G Sv2a synaptic vesicle glycoprotein 2a JBrowse link 2 198,321,100 198,336,889 RGD:634182
RGD:13792537
G Sv2b synaptic vesicle glycoprotein 2b JBrowse link 1 136,664,199 136,842,247 RGD:13792537
G Sv2c synaptic vesicle glycoprotein 2c JBrowse link 2 26,495,757 26,707,691 RGD:13792537
G Svop SV2 related protein JBrowse link 12 48,292,272 48,351,974 RGD:1600115
G Syn1 synapsin I JBrowse link X 1,321,315 1,379,202 RGD:1624291
RGD:13792537
G Syn2 synapsin II JBrowse link 4 147,037,179 147,195,096 RGD:1624291
RGD:13792537
RGD:1600115
G Syn3 synapsin III JBrowse link 7 23,403,896 23,808,602 RGD:1624291
RGD:13792537
RGD:1600115
G Syngr1 synaptogyrin 1 JBrowse link 7 121,311,008 121,334,437 RGD:70030
RGD:13792537
G Syngr2 synaptogyrin 2 JBrowse link 10 106,812,740 106,816,675 RGD:8554439
RGD:13792537
G Syngr3 synaptogyrin 3 JBrowse link 10 14,051,413 14,056,169 RGD:13792537
G Syngr4 synaptogyrin 4 JBrowse link 1 101,872,541 101,883,897 RGD:13792537
G Synpr synaptoporin JBrowse link 15 14,558,613 14,885,790 RGD:1302376
RGD:13792537
G Syp synaptophysin JBrowse link X 15,694,699 15,709,244 RGD:1600115
RGD:13792537
RGD:1624291
RGD:12793033
G Sypl1 synaptophysin-like 1 JBrowse link 6 52,265,920 52,286,037 RGD:13792537
G Sypl2 synaptophysin-like 2 JBrowse link 2 211,003,046 211,017,778 RGD:13792537
G Syt1 synaptotagmin 1 JBrowse link 7 50,084,063 50,638,996 RGD:729959
RGD:13792537
RGD:12793033
RGD:1624291
G Syt12 synaptotagmin 12 JBrowse link 1 219,690,013 219,719,359 RGD:1600115
G Syt2 synaptotagmin 2 JBrowse link 13 51,569,248 51,577,824 RGD:729949
RGD:13792537
G Syt5 synaptotagmin 5 JBrowse link 1 72,859,806 72,867,934 RGD:13792537
G Syt6 synaptotagmin 6 JBrowse link 2 206,064,181 206,119,034 RGD:1600115
G Syt7 synaptotagmin 7 JBrowse link 1 226,435,816 226,498,008 RGD:1600115
G Syt8 synaptotagmin 8 JBrowse link 1 215,605,408 215,607,602 RGD:13792537
G Tprg1l tumor protein p63 regulated 1-like JBrowse link 5 171,456,299 171,459,488 RGD:1600115
G Trpm7 transient receptor potential cation channel, subfamily M, member 7 JBrowse link 3 119,258,189 119,347,084 RGD:5684965
G Unc13a unc-13 homolog A JBrowse link 16 20,056,398 20,103,951 RGD:13792537
G Unc13b unc-13 homolog B JBrowse link 5 58,505,449 58,714,396 RGD:13792537
G Unc13c unc-13 homolog C JBrowse link 8 80,202,736 80,656,363 RGD:11535093
RGD:13792537
G Vamp2 vesicle-associated membrane protein 2 JBrowse link 10 55,675,171 55,679,405 RGD:634537
RGD:1624291
RGD:12793033
G Vti1a vesicle transport through interaction with t-SNAREs 1A JBrowse link 1 276,310,072 276,508,635 RGD:1600115
tertiary granule term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adam8 ADAM metallopeptidase domain 8 JBrowse link 1 212,317,510 212,332,895 RGD:1624291
G Stx7 syntaxin 7 JBrowse link 1 22,241,655 22,281,850 RGD:1624291
G Stxbp2 syntaxin binding protein 2 JBrowse link 12 2,180,101 2,191,863 RGD:1600115
RGD:1624291
G Stxbp3 syntaxin binding protein 3 JBrowse link 2 211,595,763 211,638,756 RGD:1624291
tertiary granule membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cd177 CD177 molecule JBrowse link 1 82,964,683 82,987,306 RGD:1624291
G Slc11a1 solute carrier family 11 member 1 JBrowse link 9 81,655,590 81,666,697 RGD:1624291
RGD:1600115
G Vamp1 vesicle-associated membrane protein 1 JBrowse link 4 157,726,941 157,733,644 RGD:1624291
Weibel-Palade body term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ece1 endothelin converting enzyme 1 JBrowse link 5 156,215,469 156,318,652 RGD:1624291
RGD:1600115
G Edn1 endothelin 1 JBrowse link 17 22,136,814 22,143,745 RGD:8662311
G Rab27a RAB27A, member RAS oncogene family JBrowse link 8 79,722,334 79,776,228 RGD:10047177
G Unc13d unc-13 homolog D JBrowse link 10 104,613,907 104,628,664 RGD:1600115
RGD:1624291
G Vwf von Willebrand factor JBrowse link 4 158,085,059 158,219,525 RGD:1600115
RGD:1624291
zymogen granule term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cel carboxyl ester lipase JBrowse link 3 7,134,021 7,141,522 RGD:2313571
G Cuzd1 CUB and zona pellucida-like domains 1 JBrowse link 1 201,881,846 201,894,970 RGD:1624291
G Gnai3 G protein subunit alpha i3 JBrowse link 2 210,896,779 210,934,733 RGD:728690
G Hspd1 heat shock protein family D (Hsp60) member 1 JBrowse link 9 61,680,529 61,691,202 RGD:2298714
G Ogt O-linked N-acetylglucosamine (GlcNAc) transferase JBrowse link X 71,540,870 71,585,906 RGD:9590169
G Pla2g4a phospholipase A2 group IVA JBrowse link 13 67,062,252 67,206,688 RGD:1642447
G Rab3d RAB3D, member RAS oncogene family JBrowse link 8 22,920,238 22,929,368 RGD:1624291
G Reg1a regenerating family member 1 alpha JBrowse link 4 109,497,962 109,500,626 RGD:9831428
G Reg3b regenerating family member 3 beta JBrowse link 4 109,467,272 109,470,510 RGD:9831428
G Srgn serglycin JBrowse link 20 32,120,317 32,158,071 RGD:2316805
G Vamp8 vesicle-associated membrane protein 8 JBrowse link 4 100,250,301 100,252,756 RGD:1624291
zymogen granule membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Clca1 chloride channel accessory 1 JBrowse link 2 250,897,980 250,923,711 RGD:4188872
G Cuzd1 CUB and zona pellucida-like domains 1 JBrowse link 1 201,881,846 201,894,970 RGD:1624291
RGD:1600115
G Dmbt1 deleted in malignant brain tumors 1 JBrowse link 1
1
201,620,642
203,149,414
201,689,905
203,228,705
RGD:1624291
RGD:1600115
G Kcnq1 potassium voltage-gated channel subfamily Q member 1 JBrowse link 1 216,293,087 216,630,339 RGD:2317969
G Pnliprp2 pancreatic lipase related protein 2 JBrowse link 1 279,896,973 279,927,600 RGD:633718
G Rab27b RAB27B, member RAS oncogene family JBrowse link 18 68,486,006 68,644,595 RGD:1303344
G Rab5a RAB5A, member RAS oncogene family JBrowse link 9 5,910 6,065 RGD:2306267
G Scamp1 secretory carrier membrane protein 1 JBrowse link 2 23,858,021 23,941,128 RGD:1624291
RGD:1600115
G Stx3 syntaxin 3 JBrowse link 1 228,137,781 228,195,004 RGD:1624291
G Stxbp2 syntaxin binding protein 2 JBrowse link 12 2,180,101 2,191,863 RGD:1624291
RGD:1600115
G Tmed10 transmembrane p24 trafficking protein 10 JBrowse link 6 109,169,739 109,205,004 RGD:68840
RGD:1624291
RGD:2317246
G Tmed2 transmembrane p24 trafficking protein 2 JBrowse link 12 37,471,259 37,480,344 RGD:68840
G Vamp2 vesicle-associated membrane protein 2 JBrowse link 10 55,675,171 55,679,405 RGD:1624291
G Zg16 zymogen granule protein 16 JBrowse link 1 198,483,800 198,486,157 RGD:727222

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 19737
    intracellular 13718
      cytoplasm 10517
        cytoplasmic vesicle 1811
          secretory vesicle 648
            exocytic vesicle + 313
            secretory granule + 392
Path 2
Term Annotations click to browse term
  cellular_component 19737
    cellular anatomical entity 19353
      organelle 12456
        membrane-bounded organelle 10810
          vesicle 1961
            intracellular vesicle 1816
              cytoplasmic vesicle 1811
                secretory vesicle 648
                  exocytic vesicle + 313
                  secretory granule + 392
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.