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ONTOLOGY REPORT - ANNOTATIONS


Term:synaptic vesicle cycle
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Accession:GO:0099504 term browser browse the term
Definition:A biological process in which synaptic vesicles are loaded with neurotransmitters, move to the active zone, exocytose and are then recycled via endocytosis, ultimately leading to reloading with neurotransmitters.


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synaptic vesicle cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BRSK1 BR serine/threonine kinase 1 ISO (MGI:MGI:5707546|PMID:26444684) ARUK-UCL PMID:26444684 MGI:MGI:5707546 NCBI chr19:52,326,538...52,355,060
Ensembl chr19:61,021,493...61,045,659
JBrowse link
G STXBP5 syntaxin binding protein 5 ISO PMID:27807164 SynGO PMID:27807164 RGD:13702312 NCBI chr 6:145,006,696...145,192,467
Ensembl chr 6:149,719,064...149,902,662
JBrowse link
G SYN1 synapsin I ISO (MGI:MGI:63816|PMID:7902212) MGI PMID:7902212 MGI:MGI:63816 NCBI chr  X:40,007,777...40,055,801 JBrowse link
G SYN2 synapsin II ISO (MGI:MGI:74599|PMID:7777057) SynGO PMID:7777057 MGI:MGI:74599 NCBI chr 3:11,935,680...12,118,981
Ensembl chr 3:12,282,573...12,464,413
JBrowse link
G SYN3 synapsin III ISO (MGI:MGI:2180939|PMID:12040043) SynGO PMID:12040043 MGI:MGI:2180939 NCBI chr22:13,517,932...14,069,661
Ensembl chr22:31,373,604...31,866,798
JBrowse link
aminergic neurotransmitter loading into synaptic vesicle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DDC dopa decarboxylase ISO RGD PMID:19903816 RGD:5128868 NCBI chr 7:51,101,169...51,206,031
Ensembl chr 7:51,345,228...51,449,710
JBrowse link
G SLC18A2 solute carrier family 18 member A2 ISO RGD PMID:19903816 RGD:5128868 NCBI chr10:113,823,005...113,862,451
Ensembl chr10:117,250,639...117,290,064
JBrowse link
G TH tyrosine hydroxylase ISO RGD PMID:19903816 RGD:5128868 NCBI chr11:2,204,820...2,212,750
Ensembl chr11:2,231,248...2,242,433
JBrowse link
calcium ion-regulated exocytosis of neurotransmitter term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CACNA1A calcium voltage-gated channel subunit alpha1 A ISO (MGI:MGI:1353373|PMID:10670432) MGI PMID:10670432 MGI:MGI:1353373 NCBI chr19:12,769,586...13,189,022
Ensembl chr19:13,507,102...13,804,729
JBrowse link
G DOC2B double C2 domain beta ISO PMID:20150444
(MGI:MGI:4439222|PMID:20150444)
UniProt
UniProtKB
PMID:20150444 MGI:MGI:4439222, RGD:8554647 NCBI chr17:19,854...58,336 JBrowse link
G RIMS1 regulating synaptic membrane exocytosis 1 ISO (MGI:MGI:3703478|PMID:17124501) MGI PMID:17124501 MGI:MGI:3703478 NCBI chr 6:69,714,807...70,231,260
Ensembl chr 6:73,008,176...73,523,422
JBrowse link
G RIMS2 regulating synaptic membrane exocytosis 2 ISO (MGI:MGI:3703478|PMID:17124501) MGI PMID:17124501 MGI:MGI:3703478 NCBI chr 8:100,156,403...100,894,128 JBrowse link
G SNAP25 synaptosome associated protein 25 ISO RGD PMID:14980208 RGD:1581082 NCBI chr20:10,164,236...10,252,856
Ensembl chr20:10,218,358...10,252,841
JBrowse link
G STX1B syntaxin 1B ISO (MGI:MGI:3803800|PMID:18703708) ParkinsonsUK-UCL PMID:18703708 MGI:MGI:3803800 NCBI chr16:23,956,426...23,979,646
Ensembl chr16:31,356,907...31,378,870
JBrowse link
G SYT1 synaptotagmin 1 ISO (MGI:MGI:5141208|PMID:21521611) MGI PMID:21521611 MGI:MGI:5141208 NCBI chr12:76,392,955...76,981,800
Ensembl chr12:79,595,704...79,829,923
JBrowse link
G SYT7 synaptotagmin 7 ISO (MGI:MGI:5707519|PMID:26738595) UniProtKB PMID:26738595 MGI:MGI:5707519 NCBI chr11:56,814,694...56,880,439 JBrowse link
calcium-dependent activation of synaptic vesicle fusion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PRRT2 proline rich transmembrane protein 2 ISO (MGI:MGI:5792766|PMID:27052163) SynGO PMID:27052163 MGI:MGI:5792766 Ensembl chr16:30,183,352...30,187,862 JBrowse link
G SYT1 synaptotagmin 1 ISO (MGI:MGI:69538|PMID:7954835) SynGO PMID:7954835 MGI:MGI:69538 NCBI chr12:76,392,955...76,981,800
Ensembl chr12:79,595,704...79,829,923
JBrowse link
G SYT2 synaptotagmin 2 ISO (MGI:MGI:3695515|PMID:17192432) SynGO PMID:17192432 MGI:MGI:3695515 NCBI chr 1:178,187,872...178,308,522
Ensembl chr 1:182,490,401...182,538,123
JBrowse link
G SYT7 synaptotagmin 7 ISO (MGI:MGI:5554634|PMID:24267651) SynGO PMID:24267651 MGI:MGI:5554634 NCBI chr11:56,814,694...56,880,439 JBrowse link
G SYT9 synaptotagmin 9 ISO (MGI:MGI:3714434|PMID:17521570) SynGO PMID:17521570 MGI:MGI:3714434 NCBI chr11:7,350,612...7,565,272
Ensembl chr11:7,032,803...7,247,187
JBrowse link
clathrin-dependent synaptic vesicle endocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BTBD8 BTB domain containing 8 ISO (MGI:MGI:6104538|PMID:29262337) UniProt PMID:29262337 MGI:MGI:6104538 NCBI chr 1:94,739,780...94,843,172
Ensembl chr 1:93,569,680...93,587,229
JBrowse link
fast, calcium ion-dependent exocytosis of neurotransmitter term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SYT1 synaptotagmin 1 ISO (MGI:MGI:3040539|PMID:12526776)
(MGI:MGI:3653150|PMID:9194562), (MGI:MGI:69538|PMID:7954835)
ParkinsonsUK-UCL PMID:7954835, PMID:9194562, PMID:12526776 MGI:MGI:3040539, MGI:MGI:3653150, MGI:MGI:69538 NCBI chr12:76,392,955...76,981,800
Ensembl chr12:79,595,704...79,829,923
JBrowse link
negative regulation of synaptic vesicle clustering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PTEN phosphatase and tensin homolog ISO (MGI:MGI:3629385|PMID:16675393), (MGI:MGI:3772418|PMID:18082964) CACAO PMID:16675393, PMID:18082964 MGI:MGI:3629385, MGI:MGI:3772418 NCBI chr10:84,587,841...84,689,043
Ensembl chr10:88,093,539...88,194,605
JBrowse link
negative regulation of synaptic vesicle endocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SYT11 synaptotagmin 11 ISO PMID:26589353 ParkinsonsUK-UCL PMID:26589353 RGD:11079192 NCBI chr 1:131,193,999...131,218,752
Ensembl chr 1:135,026,032...135,046,943
JBrowse link
negative regulation of synaptic vesicle exocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BRAF B-Raf proto-oncogene, serine/threonine kinase ISO (MGI:MGI:5490391|PMID:23616533) MGI PMID:23616533 MGI:MGI:5490391 NCBI chr 7:132,651,908...132,855,422
Ensembl chr 7:145,138,510...145,327,115
JBrowse link
G FMR1 FMRP translational regulator 1 ISO PMID:24709664 UniProt PMID:24709664 RGD:11059581 NCBI chr  X:136,937,889...136,976,828
Ensembl chr  X:147,365,748...147,405,321
JBrowse link
G RAP1A RAP1A, member of RAS oncogene family ISO (MGI:MGI:5490391|PMID:23616533) MGI PMID:23616533 MGI:MGI:5490391 NCBI chr 1:114,279,255...114,376,977
Ensembl chr 1:125,971,598...125,994,813
JBrowse link
G RAP1B RAP1B, member of RAS oncogene family ISO (MGI:MGI:5490391|PMID:23616533) MGI PMID:23616533 MGI:MGI:5490391 NCBI chr12:66,122,212...66,172,450
Ensembl chr12:68,942,053...68,955,649
JBrowse link
G SYT4 synaptotagmin 4 ISO (MGI:MGI:4457852|PMID:19448629) SynGO-UCL PMID:19448629 MGI:MGI:4457852 NCBI chr18:36,540,756...36,550,439
Ensembl chr18:40,089,938...40,099,721
JBrowse link
negative regulation of synaptic vesicle recycling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CYFIP1 cytoplasmic FMR1 interacting protein 1 ISO RGD PMID:26843638 RGD:11342679 Ensembl chr15:20,462,811...20,573,684 JBrowse link
G STX1B syntaxin 1B ISO (MGI:MGI:5603022|PMID:24587181) ParkinsonsUK-UCL PMID:24587181 MGI:MGI:5603022 NCBI chr16:23,956,426...23,979,646
Ensembl chr16:31,356,907...31,378,870
JBrowse link
neurotransmitter loading into synaptic vesicle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SLC17A6 solute carrier family 17 member 6 ISO (PMID:11698620)
PMID:11502256
SynGO PMID:11502256, PMID:11698620 RGD:13702232 NCBI chr11:22,350,537...22,392,009
Ensembl chr11:22,258,011...22,301,944
JBrowse link
G SLC17A7 solute carrier family 17 member 7 ISO (MGI:MGI:3616153|PMID:15118123)
PMID:10938000
SynGO PMID:10938000, PMID:15118123 MGI:MGI:3616153, RGD:12050146 NCBI chr19:46,443,076...46,455,195
Ensembl chr19:55,365,811...55,377,438
JBrowse link
G SLC17A8 solute carrier family 17 member 8 ISO (PMID:12097496) SynGO PMID:12097496 NCBI chr12:97,935,177...98,001,240
Ensembl chr12:101,342,113...101,405,844
JBrowse link
G SLC18A2 solute carrier family 18 member A2 ISO (MGI:MGI:1194523|PMID:9427251) SynGO PMID:9427251 MGI:MGI:1194523 NCBI chr10:113,823,005...113,862,451
Ensembl chr10:117,250,639...117,290,064
JBrowse link
G SLC18A3 solute carrier family 18 member A3 ISO (MGI:MGI:6189683|PMID:4075114)
PMID:9182805
SynGO PMID:4075114, PMID:9182805 MGI:MGI:6189683, RGD:13702424 NCBI chr10:44,630,006...44,632,419 JBrowse link
G SLC32A1 solute carrier family 32 member 1 ISO PMID:9349821 SynGO PMID:9349821 RGD:730037 NCBI chr20:35,049,115...35,054,347
Ensembl chr20:36,157,265...36,162,426
JBrowse link
positive regulation of calcium ion-dependent exocytosis of neurotransmitter term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SYT1 synaptotagmin 1 ISO (MGI:MGI:2179533|PMID:11242035) UniProt PMID:11242035 MGI:MGI:2179533 NCBI chr12:76,392,955...76,981,800
Ensembl chr12:79,595,704...79,829,923
JBrowse link
positive regulation of synaptic vesicle clustering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCL2L1 BCL2 like 1 ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr20:27,955,688...28,015,950
Ensembl chr20:29,088,055...29,146,585
JBrowse link
G CDH2 cadherin 2 ISO (MGI:MGI:4457945|PMID:20534458) BHF-UCL PMID:20534458 MGI:MGI:4457945 NCBI chr18:21,210,001...21,435,919
Ensembl chr18:24,812,019...25,008,325
JBrowse link
G MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 ISO (MGI:MGI:4457945|PMID:20534458) BHF-UCL PMID:20534458 MGI:MGI:4457945 NCBI chr 7:69,943,704...71,395,176
Ensembl chr 7:83,758,512...84,760,872
JBrowse link
G NLGN1 neuroligin 1 ISO (MGI:MGI:5284797|PMID:15620359) BHF-UCL PMID:15620359 MGI:MGI:5284797 NCBI chr 3:170,416,885...171,333,094
Ensembl chr 3:178,810,253...179,503,756
JBrowse link
G NLGN2 neuroligin 2 ISO (MGI:MGI:5284797|PMID:15620359) BHF-UCL PMID:15620359 MGI:MGI:5284797 NCBI chr17:7,438,853...7,454,014 JBrowse link
G NLGN3 neuroligin 3 ISO (MGI:MGI:5286761|PMID:21808020) CACAO PMID:21808020 MGI:MGI:5286761 NCBI chr  X:60,413,098...60,439,359
Ensembl chr  X:70,469,764...70,496,526
JBrowse link
G PICALM phosphatidylinositol binding clathrin assembly protein ISO RGD PMID:22851330 RGD:13506174 NCBI chr11:81,011,324...81,122,352
Ensembl chr11:84,619,241...84,730,684
JBrowse link
G SNAP91 synaptosome associated protein 91 ISO RGD PMID:22851330 RGD:13506174 NCBI chr 6:81,441,792...81,600,505
Ensembl chr 6:84,720,850...84,874,407
JBrowse link
positive regulation of synaptic vesicle endocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AP2M1 adaptor related protein complex 2 subunit mu 1 ISO RGD PMID:19762466 RGD:13461856 NCBI chr 3:181,210,045...181,219,327
Ensembl chr 3:189,692,898...189,702,261
JBrowse link
G BCL2L1 BCL2 like 1 ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr20:27,955,688...28,015,950
Ensembl chr20:29,088,055...29,146,585
JBrowse link
G DNM1 dynamin 1 ISO RGD PMID:17437541 RGD:8554440 NCBI chr 9:99,324,385...99,376,262
Ensembl chr 9:128,004,508...128,044,690
JBrowse link
G DNM1L dynamin 1 like ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr12:53,476,553...53,541,421
Ensembl chr12:56,077,504...56,142,376
JBrowse link
G LRRK2 leucine rich repeat kinase 2 ISO RGD PMID:18445495 RGD:13462049 NCBI chr12:48,343,621...48,488,337
Ensembl chr12:49,205,930...49,350,462
JBrowse link
G MFF mitochondrial fission factor ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr2B:114,569,893...114,602,158
Ensembl chr2B:233,381,466...233,413,778
JBrowse link
G NLGN1 neuroligin 1 ISO PMID:19628693
(MGI:MGI:4355770|PMID:19628693)
BHF-UCL PMID:19628693 MGI:MGI:4355770, RGD:8554760 NCBI chr 3:170,416,885...171,333,094
Ensembl chr 3:178,810,253...179,503,756
JBrowse link
G PICALM phosphatidylinositol binding clathrin assembly protein ISO RGD PMID:21808019 RGD:13506237 NCBI chr11:81,011,324...81,122,352
Ensembl chr11:84,619,241...84,730,684
JBrowse link
G PPP3CC protein phosphatase 3 catalytic subunit gamma ISO RGD PMID:26627835 RGD:11532172 NCBI chr 8:21,690,598...21,791,335
Ensembl chr 8:18,629,261...18,729,995
JBrowse link
G SH3GL1 SH3 domain containing GRB2 like 1, endophilin A2 ISO RGD PMID:14532001 RGD:13464359 NCBI chr19:3,383,267...3,423,165
Ensembl chr19:4,329,750...4,340,121
JBrowse link
G SNAP91 synaptosome associated protein 91 ISO RGD PMID:21808019 RGD:13506237 NCBI chr 6:81,441,792...81,600,505
Ensembl chr 6:84,720,850...84,874,407
JBrowse link
G TOR1A torsin family 1 member A ISO (PMID:21102408) UniProtKB PMID:21102408 NCBI chr 9:100,940,554...100,951,726 JBrowse link
positive regulation of synaptic vesicle exocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCL2L1 BCL2 like 1 ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr20:27,955,688...28,015,950
Ensembl chr20:29,088,055...29,146,585
JBrowse link
G DNM1L dynamin 1 like ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr12:53,476,553...53,541,421
Ensembl chr12:56,077,504...56,142,376
JBrowse link
G NLGN1 neuroligin 1 ISO (MGI:MGI:4355770|PMID:19628693) BHF-UCL PMID:19628693 MGI:MGI:4355770, RGD:8554760 NCBI chr 3:170,416,885...171,333,094
Ensembl chr 3:178,810,253...179,503,756
JBrowse link
G SLC4A8 solute carrier family 4 member 8 ISO (MGI:MGI:5013899|PMID:21593314) ARUK-UCL PMID:21593314 MGI:MGI:5013899 NCBI chr12:37,243,593...37,329,083
Ensembl chr12:38,134,574...38,214,036
JBrowse link
positive regulation of synaptic vesicle priming term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RIMS1 regulating synaptic membrane exocytosis 1 ISO PMID:21262469 ParkinsonsUK-UCL PMID:21262469 RGD:10047275 NCBI chr 6:69,714,807...70,231,260
Ensembl chr 6:73,008,176...73,523,422
JBrowse link
G UNC13B unc-13 homolog B ISO PMID:21262469 ParkinsonsUK-UCL PMID:21262469 RGD:10047275 NCBI chr 9:35,011,350...35,255,148 JBrowse link
positive regulation of synaptic vesicle recycling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DNM1 dynamin 1 ISO RGD PMID:17880892 RGD:8553820 NCBI chr 9:99,324,385...99,376,262
Ensembl chr 9:128,004,508...128,044,690
JBrowse link
G DNM3 dynamin 3 ISO RGD PMID:23687302 RGD:13462065 NCBI chr 1:147,339,773...147,916,513
Ensembl chr 1:151,049,346...151,615,808
JBrowse link
G PLAA phospholipase A2 activating protein ISO (MGI:MGI:5883825|PMID:28413018) UniProtKB PMID:28413018 MGI:MGI:5883825 NCBI chr 9:26,749,607...26,793,580
Ensembl chr 9:27,357,437...27,401,103
JBrowse link
presynaptic dense core vesicle exocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CADPS calcium dependent secretion activator ISO (MGI:MGI:5634021|PMID:25719439) MGI
SynGO
PMID:25719439 MGI:MGI:5634021 NCBI chr 3:62,321,496...62,797,298 JBrowse link
G STXBP1 syntaxin binding protein 1 ISO (MGI:MGI:3621672|PMID:11545717) SynGO PMID:11545717 MGI:MGI:3621672 NCBI chr 9:98,731,527...98,811,608
Ensembl chr 9:127,434,080...127,486,152
JBrowse link
G SYT6 synaptotagmin 6 ISO PMID:26216953 SynGO PMID:26216953 RGD:13702162 NCBI chr 1:88,397,809...88,467,493 JBrowse link
G UNC13A unc-13 homolog A ISO (MGI:MGI:5819330|PMID:26575293) SynGO PMID:26575293 MGI:MGI:5819330 NCBI chr19:17,088,654...17,175,559
Ensembl chr19:18,068,006...18,150,642
JBrowse link
G UNC13B unc-13 homolog B ISO (MGI:MGI:5819330|PMID:26575293) SynGO PMID:26575293 MGI:MGI:5819330 NCBI chr 9:35,011,350...35,255,148 JBrowse link
regulation of calcium ion-dependent exocytosis of neurotransmitter term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP2A2 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2 ISO (MGI:MGI:4866942|PMID:21106823) MGI PMID:21106823 MGI:MGI:4866942 NCBI chr12:107,857,009...107,924,938
Ensembl chr12:111,246,508...111,311,923
JBrowse link
G RAB3GAP1 RAB3 GTPase activating protein catalytic subunit 1 ISO (MGI:MGI:3652690|PMID:16782817) ParkinsonsUK-UCL PMID:16782817 MGI:MGI:3652690 NCBI chr2B:24,692,363...24,810,685
Ensembl chr2B:139,125,375...139,242,721
JBrowse link
regulation of neurotransmitter loading into synaptic vesicle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SLC10A4 solute carrier family 10 member 4 ISO (MGI:MGI:5913479|PMID:25176177) SynGO PMID:25176177 MGI:MGI:5913479 NCBI chr 4:73,663,681...73,669,852
Ensembl chr 4:84,391,103...84,402,422
JBrowse link
regulation of presynaptic dense core granule exocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G P2RX7 purinergic receptor P2X 7 ISO PMID:24037803 SynGO PMID:24037803 RGD:13702177 NCBI chr12:118,731,761...118,786,039
Ensembl chr12:122,102,888...122,154,068
JBrowse link
G SYT4 synaptotagmin 4 ISO (MGI:MGI:4457852|PMID:19448629) SynGO PMID:19448629 MGI:MGI:4457852 NCBI chr18:36,540,756...36,550,439
Ensembl chr18:40,089,938...40,099,721
JBrowse link
regulation of recycling endosome localization within postsynapse term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GRIPAP1 GRIP1 associated protein 1 ISO PMID:20098723 SynGO PMID:20098723 RGD:12050105 NCBI chr  X:41,271,762...41,300,327
Ensembl chr  X:49,128,760...49,157,059
JBrowse link
regulation of synaptic vesicle budding from presynaptic endocytic zone membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SLC2A4 solute carrier family 2 member 4 ISO PMID:28111082 SynGO PMID:28111082 RGD:13702195 NCBI chr17:7,312,605...7,319,430
Ensembl chr17:7,299,966...7,306,344
JBrowse link
regulation of synaptic vesicle clustering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PCDH17 protocadherin 17 ISO (MGI:MGI:5514320|PMID:23684785) MGI PMID:23684785 MGI:MGI:5514320 NCBI chr13:38,801,514...38,900,811
Ensembl chr13:57,532,850...57,631,725
JBrowse link
regulation of synaptic vesicle cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BSN bassoon presynaptic cytomatrix protein ISO (MGI:MGI:4879069|PMID:21092860) SynGO PMID:21092860 MGI:MGI:4879069 NCBI chr 3:49,483,652...49,603,928
Ensembl chr 3:50,790,552...50,841,178
JBrowse link
G CDK5R1 cyclin dependent kinase 5 regulatory subunit 1 ISO PMID:24254883 SynGO PMID:24254883 RGD:13702178 NCBI chr17:24,285,069...24,289,311
Ensembl chr17:24,577,537...24,579,232
JBrowse link
G DNAJC5 DnaJ heat shock protein family (Hsp40) member C5 ISO (MGI:MGI:5440402|PMID:22500637) MGI PMID:22500637 MGI:MGI:5440402 Ensembl chr20:61,848,236...61,856,265 JBrowse link
G NRXN1 neurexin 1 ISO (MGI:MGI:4366191|PMID:19822762) SynGO PMID:19822762 MGI:MGI:4366191 NCBI chr2A:50,063,398...51,178,659
Ensembl chr2A:50,985,067...52,091,277
JBrowse link
G PLD1 phospholipase D1 ISO (PMID:11752468) SynGO PMID:11752468 NCBI chr 3:168,606,342...168,816,383
Ensembl chr 3:176,790,753...176,961,033
JBrowse link
G PLS3 plastin 3 ISO (MGI:MGI:5469774|PMID:23263861) SynGO PMID:23263861 MGI:MGI:5469774 NCBI chr  X:104,656,110...104,745,702
Ensembl chr  X:115,160,032...115,250,144
JBrowse link
G PRKAR1B protein kinase cAMP-dependent type I regulatory subunit beta ISO (MGI:MGI:77916|PMID:8548807) SynGO PMID:8548807 MGI:MGI:77916 NCBI chr 7:700,691...876,497
Ensembl chr 7:923,668...1,097,456
JBrowse link
G RAB3B RAB3B, member RAS oncogene family ISO (PMID:20007772) SynGO PMID:20007772 NCBI chr 1:51,170,956...51,242,828
Ensembl chr 1:52,666,713...52,723,975
JBrowse link
G RAPGEF4 Rap guanine nucleotide exchange factor 4 ISO (MGI:MGI:5641291|PMID:25904804) SynGO PMID:25904804 MGI:MGI:5641291 NCBI chr2B:60,022,738...60,339,981
Ensembl chr2B:177,655,733...177,793,644
JBrowse link
G SNAP29 synaptosome associated protein 29 ISO PMID:15890653 SynGO PMID:15890653 RGD:13702146 NCBI chr22:3,082,622...3,115,325
Ensembl chr22:19,572,618...19,605,931
JBrowse link
G SYN1 synapsin I ISO (MGI:MGI:82574|PMID:8794863) SynGO PMID:8794863 MGI:MGI:82574 NCBI chr  X:40,007,777...40,055,801 JBrowse link
regulation of synaptic vesicle docking term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CAMK2A calcium/calmodulin dependent protein kinase II alpha ISO (MGI:MGI:3763684|PMID:17660813) MGI PMID:17660813 MGI:MGI:3763684 NCBI chr 5:145,644,164...145,714,143
Ensembl chr 5:151,649,062...151,719,373
JBrowse link
regulation of synaptic vesicle endocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BTBD9 BTB domain containing 9 ISO (MGI:MGI:5438074|PMID:22536397) MGI PMID:22536397 MGI:MGI:5438074 NCBI chr 6:37,733,575...38,211,857
Ensembl chr 6:38,928,879...39,358,424
JBrowse link
G CALM1 calmodulin 1 ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr14:71,015,099...71,026,322
Ensembl chr19:52,121,687...52,131,135
JBrowse link
G CALM2 calmodulin 2 ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr2A:47,274,722...47,290,861 JBrowse link
G CALM3 calmodulin 3 ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr19:43,593,069...43,602,550
Ensembl chr19:52,121,687...52,131,135
JBrowse link
G DGKQ diacylglycerol kinase theta ISO (MGI:MGI:5807028|PMID:26748701) SynGO PMID:26748701 MGI:MGI:5807028 NCBI chr 4:1,075,133...1,090,081
Ensembl chr 4:994,985...1,007,724
JBrowse link
G DNM1 dynamin 1 ISO RGD PMID:16648848 RGD:13504740 NCBI chr 9:99,324,385...99,376,262
Ensembl chr 9:128,004,508...128,044,690
JBrowse link
G LRRK2 leucine rich repeat kinase 2 ISO (MGI:MGI:6189511|PMID:25501810) SynGO PMID:25501810 MGI:MGI:6189511 NCBI chr12:48,343,621...48,488,337
Ensembl chr12:49,205,930...49,350,462
JBrowse link
G PICALM phosphatidylinositol binding clathrin assembly protein ISO RGD PMID:18842885 RGD:8554167 NCBI chr11:81,011,324...81,122,352
Ensembl chr11:84,619,241...84,730,684
JBrowse link
G PIP5K1C phosphatidylinositol-4-phosphate 5-kinase type 1 gamma ISO (MGI:MGI:3054280|PMID:15386003) MGI PMID:15386003 MGI:MGI:3054280 NCBI chr19:2,655,674...2,727,454
Ensembl chr19:3,606,279...3,641,933
JBrowse link
G PPP3CB protein phosphatase 3 catalytic subunit beta ISO (MGI:MGI:4830393|PMID:20810903) MGI PMID:20810903 MGI:MGI:4830393 NCBI chr10:69,984,241...70,043,352
Ensembl chr10:72,443,051...72,501,752
JBrowse link
G PPP3CC protein phosphatase 3 catalytic subunit gamma ISO PMID:26627835 SynGO PMID:26627835 RGD:11532172 NCBI chr 8:21,690,598...21,791,335
Ensembl chr 8:18,629,261...18,729,995
JBrowse link
G ROCK1 Rho associated coiled-coil containing protein kinase 1 ISO (PMID:27160703) ARUK-UCL PMID:27160703 NCBI chr18:14,192,293...14,352,357
Ensembl chr18:17,833,047...17,990,086
JBrowse link
G SCAMP5 secretory carrier membrane protein 5 ISO PMID:25057210 SynGO PMID:25057210 RGD:13702419 NCBI chr15:53,935,756...53,961,611
Ensembl chr15:73,565,906...73,577,524
JBrowse link
G SH3GL1 SH3 domain containing GRB2 like 1, endophilin A2 ISO RGD PMID:22750032 RGD:13463484 NCBI chr19:3,383,267...3,423,165
Ensembl chr19:4,329,750...4,340,121
JBrowse link
G SLC17A7 solute carrier family 17 member 7 ISO RGD PMID:16815333 RGD:13504741 NCBI chr19:46,443,076...46,455,195
Ensembl chr19:55,365,811...55,377,438
JBrowse link
G SNAP91 synaptosome associated protein 91 ISO RGD PMID:18842885 RGD:8554167 NCBI chr 6:81,441,792...81,600,505
Ensembl chr 6:84,720,850...84,874,407
JBrowse link
G SYT7 synaptotagmin 7 ISO (MGI:MGI:6189675|PMID:14532108) SynGO PMID:14532108 MGI:MGI:6189675 NCBI chr11:56,814,694...56,880,439 JBrowse link
G VAMP4 vesicle associated membrane protein 4 ISO PMID:26607000 SynGO PMID:26607000 RGD:11058152 NCBI chr 1:147,192,001...147,233,945
Ensembl chr 1:150,903,134...150,944,815
JBrowse link
regulation of synaptic vesicle exocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADCY1 adenylate cyclase 1 ISO (MGI:MGI:1202483|PMID:9547227) MGI PMID:9547227 MGI:MGI:1202483 NCBI chr 7:46,289,042...46,436,839
Ensembl chr 7:46,354,640...46,492,549
JBrowse link
G ADORA2A adenosine A2a receptor ISO PMID:15659214 SynGO PMID:15659214 RGD:1625642 NCBI chr22:5,233,876...5,248,622
Ensembl chr22:22,104,253...22,114,189
JBrowse link
G ADORA2B adenosine A2b receptor ISO (MGI:MGI:6108216|PMID:25704806) SynGO PMID:25704806 MGI:MGI:6108216 NCBI chr17:34,849,466...34,880,088 JBrowse link
G ADRA1A adrenoceptor alpha 1A ISO PMID:12548707 SynGO PMID:12548707 RGD:13702265 NCBI chr 8:25,947,996...26,138,022
Ensembl chr 8:22,853,677...23,044,388
JBrowse link
G ADRA2A adrenoceptor alpha 2A ISO (MGI:MGI:3761775|PMID:11927164) MGI PMID:11927164 MGI:MGI:3761775 NCBI chr10:107,669,860...107,673,685 JBrowse link
G ADRB2 adrenoceptor beta 2 ISO PMID:17175110 SynGO PMID:17175110 RGD:5129150 NCBI chr 5:144,259,756...144,398,421
Ensembl chr 5:150,267,554...150,315,892
JBrowse link
G APBA1 amyloid beta precursor protein binding family A member 1 ISO (MGI:MGI:2450068|PMID:12547917), (MGI:MGI:3691953|PMID:17167098) SynGO PMID:12547917, PMID:17167098 MGI:MGI:2450068, MGI:MGI:3691953 NCBI chr 9:55,124,040...55,365,521
Ensembl chr 9:68,191,877...68,275,554
JBrowse link
G APBA2 amyloid beta precursor protein binding family A member 2 ISO (MGI:MGI:3691953|PMID:17167098) SynGO PMID:17167098 MGI:MGI:3691953 NCBI chr15:167,863...400,296
Ensembl chr15:27,174,217...27,241,529
JBrowse link
G BACE1 beta-secretase 1 ISO (MGI:MGI:3806404|PMID:18753368) MGI PMID:18753368 MGI:MGI:3806404 NCBI chr11:112,120,950...112,151,505
Ensembl chr11:116,054,303...116,084,812
JBrowse link
G CACNB4 calcium voltage-gated channel auxiliary subunit beta 4 ISO (MGI:MGI:1340444|PMID:10322048) SynGO PMID:10322048 MGI:MGI:1340444 NCBI chr2B:39,137,777...39,399,007 JBrowse link
G CALM1 calmodulin 1 ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr14:71,015,099...71,026,322
Ensembl chr19:52,121,687...52,131,135
JBrowse link
G CALM2 calmodulin 2 ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr2A:47,274,722...47,290,861 JBrowse link
G CALM3 calmodulin 3 ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr19:43,593,069...43,602,550
Ensembl chr19:52,121,687...52,131,135
JBrowse link
G CASK calcium/calmodulin dependent serine protein kinase ISO (MGI:MGI:3698294|PMID:17287346) SynGO PMID:17287346 MGI:MGI:3698294 NCBI chr  X:33,967,329...34,374,385
Ensembl chr  X:41,659,295...42,066,570
JBrowse link
G CHRM2 cholinergic receptor muscarinic 2 ISO (MGI:MGI:2176006|PMID:11880500) SynGO PMID:11880500 MGI:MGI:2176006 NCBI chr 7:128,827,089...128,978,496
Ensembl chr 7:141,466,396...141,467,796
JBrowse link
G CHRNA3 cholinergic receptor nicotinic alpha 3 subunit ISO PMID:12065717 SynGO PMID:12065717 RGD:13702272 NCBI chr15:57,523,553...57,550,228
Ensembl chr15:76,487,710...76,512,044
JBrowse link
G CHRNA4 cholinergic receptor nicotinic alpha 4 subunit ISO (MGI:MGI:2673776|PMID:12944511) SynGO PMID:12944511 MGI:MGI:2673776 NCBI chr20:59,730,759...59,748,678
Ensembl chr20:61,270,631...61,283,005
JBrowse link
G CHRNA5 cholinergic receptor nicotinic alpha 5 subunit ISO (MGI:MGI:6191866|PMID:19693710) SynGO PMID:19693710 MGI:MGI:6191866 NCBI chr15:57,493,730...57,530,463
Ensembl chr15:76,455,165...76,486,376
JBrowse link
G CHRNA6 cholinergic receptor nicotinic alpha 6 subunit ISO (MGI:MGI:2673776|PMID:12944511) SynGO PMID:12944511 MGI:MGI:2673776 NCBI chr 8:42,000,748...42,016,913
Ensembl chr 8:39,444,447...39,460,569
JBrowse link
G CHRNA7 cholinergic receptor nicotinic alpha 7 subunit ISO PMID:21762741 SynGO PMID:21762741 RGD:13702307 NCBI chr15:10,525,535...10,667,227
Ensembl chr15:29,565,885...29,705,194
JBrowse link
G CHRNB2 cholinergic receptor nicotinic beta 2 subunit ISO (MGI:MGI:2673776|PMID:12944511), (MGI:MGI:6189689|PMID:11145999) SynGO PMID:11145999, PMID:12944511 MGI:MGI:2673776, MGI:MGI:6189689 NCBI chr 1:129,922,740...129,931,582
Ensembl chr 1:133,535,023...133,547,361
JBrowse link
G CHRNB3 cholinergic receptor nicotinic beta 3 subunit ISO (MGI:MGI:3028759|PMID:14657161) SynGO PMID:14657161 MGI:MGI:3028759 NCBI chr 8:41,947,062...41,987,159
Ensembl chr 8:39,391,001...39,429,926
JBrowse link
G CSPG5 chondroitin sulfate proteoglycan 5 ISO (MGI:MGI:3583729|PMID:15848802) SynGO PMID:15848802 MGI:MGI:3583729 NCBI chr 3:47,464,341...47,482,910
Ensembl chr 3:48,564,199...48,580,048
JBrowse link
G CYTH1 cytohesin 1 ISO PMID:9927699 SynGO PMID:9927699 RGD:13702340 NCBI chr17:72,749,310...72,857,992
Ensembl chr17:78,295,437...78,358,735
JBrowse link
G DGKI diacylglycerol kinase iota ISO (MGI:MGI:4936793|PMID:21119615) MGI PMID:21119615 MGI:MGI:4936793 NCBI chr 7:129,339,330...129,812,443
Ensembl chr 7:141,841,852...142,142,310
JBrowse link
G DRD1 dopamine receptor D1 ISO (MGI:MGI:5506871|PMID:22586226) SynGO PMID:22586226 MGI:MGI:5506871 NCBI chr 5:170,787,115...170,792,383
Ensembl chr 5:177,688,917...177,690,257
JBrowse link
G DRD2 dopamine receptor D2 ISO (MGI:MGI:2387277|PMID:12223553)
(MGI:MGI:2387277|PMID:12223553), (MGI:MGI:5506871|PMID:22586226)
SynGO PMID:12223553, PMID:22586226 MGI:MGI:2387277, MGI:MGI:5506871 NCBI chr11:108,289,838...108,357,174
Ensembl chr11:112,132,703...112,198,935
JBrowse link
G DRD4 dopamine receptor D4 ISO PMID:24155292 SynGO PMID:24155292 RGD:13702381 NCBI chr11:640,401...646,775 JBrowse link
G DTNBP1 dystrobrevin binding protein 1 ISO (MGI:MGI:3797662|PMID:18504299) SynGO PMID:18504299 MGI:MGI:3797662 NCBI chr 6:15,377,263...15,523,317
Ensembl chr 6:15,741,698...15,887,256
JBrowse link
G DVL1 dishevelled segment polarity protein 1 ISO (MGI:MGI:5699934|PMID:26400647) SynGO PMID:26400647 MGI:MGI:5699934 NCBI chr 1:92,469...106,748
Ensembl chr 1:1,292,052...1,301,008
JBrowse link
G FBXL20 F-box and leucine rich repeat protein 20 ISO (MGI:MGI:3765255|PMID:17803915) MGI PMID:17803915 MGI:MGI:3765255 NCBI chr17:17,885,351...18,018,891
Ensembl chr17:18,098,172...18,285,524
JBrowse link
G GIPC1 GIPC PDZ domain containing family member 1 ISO (MGI:MGI:3654775|PMID:16819522) SynGO PMID:16819522 MGI:MGI:3654775 NCBI chr19:14,041,192...14,059,402
Ensembl chr19:14,885,185...14,889,701
JBrowse link
G GIT1 GIT ArfGAP 1 ISO (MGI:MGI:5708768|PMID:26637799) SynGO PMID:26637799 MGI:MGI:5708768 NCBI chr17:27,185,025...27,201,146
Ensembl chr17:27,706,776...27,717,857
JBrowse link
G GIT2 GIT ArfGAP 2 ISO (MGI:MGI:5708768|PMID:26637799) SynGO PMID:26637799 MGI:MGI:5708768 NCBI chr12:107,505,791...107,572,641
Ensembl chr12:110,901,303...110,967,489
JBrowse link
G GLRA3 glycine receptor alpha 3 ISO (MGI:MGI:5770489|PMID:26851771) SynGO PMID:26851771 MGI:MGI:5770489 NCBI chr 4:166,865,061...167,045,844
Ensembl chr 4:179,083,211...179,279,232
JBrowse link
G GRIN3A glutamate ionotropic receptor NMDA type subunit 3A ISO (MGI:MGI:6109389|PMID:25144876) SynGO PMID:25144876 MGI:MGI:6109389 NCBI chr 9:72,773,866...72,943,790
Ensembl chr 9:100,767,715...100,941,323
JBrowse link
G GRM4 glutamate metabotropic receptor 4 ISO (MGI:MGI:83238|PMID:8815915) MGI PMID:8815915 MGI:MGI:83238 NCBI chr 6:33,592,030...33,718,712
Ensembl chr 6:34,696,058...34,830,868
JBrowse link
G GRM7 glutamate metabotropic receptor 7 ISO (MGI:MGI:3690146|PMID:12065412) SynGO PMID:12065412 MGI:MGI:3690146 NCBI chr 3:6,811,005...7,691,344
Ensembl chr 3:6,907,180...7,933,536
JBrowse link
G GRM8 glutamate metabotropic receptor 8 ISO PMID:15275822 SynGO PMID:15275822 RGD:6484726 NCBI chr 7:118,430,086...119,249,147 JBrowse link
G GSK3B glycogen synthase kinase 3 beta ISO (PMID:17989287) SynGO PMID:17989287 NCBI chr 3:116,943,205...117,215,001
Ensembl chr 3:123,861,379...124,126,771
JBrowse link
G HTR1A 5-hydroxytryptamine receptor 1A ISO PMID:10381597 SynGO PMID:10381597 RGD:13702211 NCBI chr 5:50,045,266...50,049,636
Ensembl chr 5:51,692,416...51,693,684
JBrowse link
G HTR1B 5-hydroxytryptamine receptor 1B ISO PMID:17067296 SynGO PMID:17067296 RGD:13702319 NCBI chr 6:75,309,078...75,313,747
Ensembl chr 6:78,596,408...78,597,580
JBrowse link
G HTR2A 5-hydroxytryptamine receptor 2A ISO PMID:12196574 SynGO PMID:12196574 RGD:13702246 NCBI chr13:27,976,415...28,042,941
Ensembl chr13:46,694,273...46,759,826
JBrowse link
G HTR7 5-hydroxytryptamine receptor 7 ISO PMID:26779891 SynGO PMID:26779891 RGD:13702205 NCBI chr10:87,480,970...87,598,212
Ensembl chr10:91,009,941...91,125,158
JBrowse link
G KCNH1 potassium voltage-gated channel subfamily H member 1 ISO (MGI:MGI:5917278|PMID:25556795) SynGO PMID:25556795 MGI:MGI:5917278 NCBI chr 1:186,233,881...186,696,509
Ensembl chr 1:191,107,256...191,562,766
JBrowse link
G LRRK2 leucine rich repeat kinase 2 ISO (PMID:23949442) ParkinsonsUK-UCL PMID:23949442 NCBI chr12:48,343,621...48,488,337
Ensembl chr12:49,205,930...49,350,462
JBrowse link
G MYO6 myosin VI ISO (MGI:MGI:3654775|PMID:16819522) SynGO PMID:16819522 MGI:MGI:3654775 NCBI chr 6:73,593,794...73,764,352
Ensembl chr 6:76,951,634...77,048,796
JBrowse link
G NCS1 neuronal calcium sensor 1 ISO PMID:12947410 SynGO PMID:12947410 RGD:13702435 NCBI chr 9:101,299,724...101,364,897
Ensembl chr 9:129,950,921...130,016,257
JBrowse link
G NR3C2 nuclear receptor subfamily 3 group C member 2 ISO (MGI:MGI:3798112|PMID:18547242) SynGO PMID:18547242 MGI:MGI:3798112 NCBI chr 4:140,418,624...140,785,180
Ensembl chr 4:152,108,508...152,430,298
JBrowse link
G NRN1 neuritin 1 ISO (MGI:MGI:5908484|PMID:28475719) SynGO PMID:28475719 MGI:MGI:5908484 NCBI chr 6:5,832,603...5,841,975
Ensembl chr 6:6,014,000...6,022,870
JBrowse link
G NRXN3 neurexin 3 ISO (MGI:MGI:5662329|PMID:26030848) SynGO PMID:26030848 MGI:MGI:5662329 NCBI chr14:58,729,335...60,444,769
Ensembl chr14:78,002,036...79,619,696
JBrowse link
G P2RX1 purinergic receptor P2X 1 ISO PMID:16000618 SynGO PMID:16000618 RGD:1581702 NCBI chr17:3,944,636...3,965,260
Ensembl chr17:3,935,982...3,956,595
JBrowse link
G P2RX2 purinergic receptor P2X 2 ISO PMID:16000618 SynGO PMID:16000618 RGD:1581702 NCBI chr12:129,969,793...129,974,399 JBrowse link
G P2RY1 purinergic receptor P2Y1 ISO PMID:16000618 SynGO PMID:16000618 RGD:1581702 NCBI chr 3:149,859,748...149,865,873
Ensembl chr 3:157,426,692...157,427,813
JBrowse link
G P2RY2 purinergic receptor P2Y2 ISO PMID:16000618 SynGO PMID:16000618 RGD:1581702 NCBI chr11:68,294,366...68,319,118
Ensembl chr11:71,532,958...71,534,091
JBrowse link
G P2RY4 pyrimidinergic receptor P2Y4 ISO PMID:16000618 SynGO PMID:16000618 RGD:1581702 NCBI chr  X:59,526,621...59,528,248
Ensembl chr  X:69,586,340...69,587,437
JBrowse link
G PFN2 profilin 2 ISO (MGI:MGI:3714870|PMID:17541406) MGI PMID:17541406 MGI:MGI:3714870 NCBI chr 3:146,986,364...146,992,558 JBrowse link
G PPFIA2 PTPRF interacting protein alpha 2 ISO PMID:23751498 SynGO PMID:23751498 RGD:13702233 NCBI chr12:78,768,756...79,271,630
Ensembl chr12:81,879,812...82,376,917
JBrowse link
G PREPL prolyl endopeptidase like ISO (PMID:24610330) UniProtKB PMID:24610330 NCBI chr2A:44,417,735...44,463,542
Ensembl chr2A:45,353,326...45,397,903
JBrowse link
G PRKCA protein kinase C alpha ISO (MGI:MGI:5141567|PMID:21658591) SynGO PMID:21658591 MGI:MGI:5141567 NCBI chr17:60,246,485...60,747,158
Ensembl chr17:65,454,907...65,947,903
JBrowse link
G PRKCB protein kinase C beta ISO (MGI:MGI:5141567|PMID:21658591) MGI PMID:21658591 MGI:MGI:5141567 NCBI chr16:13,888,936...14,268,759
Ensembl chr16:24,091,289...24,466,203
JBrowse link
G PRKCE protein kinase C epsilon ISO PMID:26625935 SynGO PMID:26625935 RGD:11353024 NCBI chr2A:45,757,629...46,294,064
Ensembl chr2A:46,688,436...47,220,313
JBrowse link
G PRKCG protein kinase C gamma ISO (MGI:MGI:5637456|PMID:24794094) SynGO PMID:24794094 MGI:MGI:5637456 NCBI chr19:50,823,372...50,849,003
Ensembl chr19:59,672,097...59,695,977
JBrowse link
G RAB3A RAB3A, member RAS oncogene family ISO PMID:28057568 UniProt PMID:28057568 RGD:14390053 NCBI chr19:17,672,661...17,679,541
Ensembl chr19:18,649,166...18,656,768
JBrowse link
G RAB5A RAB5A, member RAS oncogene family ISO (PMID:16141272) ParkinsonsUK-UCL PMID:16141272 NCBI chr 3:19,866,110...19,903,701
Ensembl chr 3:20,197,067...20,234,579
JBrowse link
G RIMS3 regulating synaptic membrane exocytosis 3 ISO PMID:20452978 MGI PMID:20452978 RGD:8554325 NCBI chr 1:39,886,961...39,958,519
Ensembl chr 1:41,239,798...41,278,282
JBrowse link
G RIMS4 regulating synaptic membrane exocytosis 4 ISO PMID:20452978 MGI PMID:20452978 RGD:8554325 NCBI chr20:41,082,200...41,141,119
Ensembl chr20:42,180,764...42,234,847
JBrowse link
G SNAPIN SNAP associated protein ISO (MGI:MGI:4430710|PMID:19217378) SynGO PMID:19217378 MGI:MGI:4430710 NCBI chr 1:129,014,668...129,018,428
Ensembl chr 1:132,644,320...132,647,095
JBrowse link
G STXBP5 syntaxin binding protein 5 ISO (MGI:MGI:3814264|PMID:18936251) SynGO PMID:18936251 MGI:MGI:3814264 NCBI chr 6:145,006,696...145,192,467
Ensembl chr 6:149,719,064...149,902,662
JBrowse link
G STXBP5L syntaxin binding protein 5 like ISO (MGI:MGI:6189626|PMID:24744148) MGI PMID:24744148 MGI:MGI:6189626 NCBI chr 3:118,022,061...118,529,311
Ensembl chr 3:124,932,110...125,434,515
JBrowse link
G SYP synaptophysin ISO (MGI:MGI:1349221|PMID:10595519) SynGO PMID:10595519 MGI:MGI:1349221 NCBI chr  X:41,487,538...41,500,039
Ensembl chr  X:49,340,021...49,352,420
JBrowse link
G SYT1 synaptotagmin 1 ISO PMID:28057568 UniProt PMID:28057568 RGD:14390053 NCBI chr12:76,392,955...76,981,800
Ensembl chr12:79,595,704...79,829,923
JBrowse link
G VPS18 VPS18 core subunit of CORVET and HOPS complexes ISO (PMID:17027648) SynGO PMID:17027648 NCBI chr15:19,836,707...19,846,231
Ensembl chr15:38,086,518...38,095,835
JBrowse link
G WNT7A Wnt family member 7A ISO (MGI:MGI:5699934|PMID:26400647) SynGO PMID:26400647 MGI:MGI:5699934 NCBI chr 3:13,733,487...13,797,189
Ensembl chr 3:14,077,839...14,138,386
JBrowse link
regulation of synaptic vesicle fusion to presynaptic active zone membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CPLX1 complexin 1 ISO (MGI:MGI:2679622|PMID:11163241) SynGO PMID:11163241 MGI:MGI:2679622 NCBI chr 4:889,037...930,046
Ensembl chr 4:819,833...858,953
JBrowse link
G CPLX2 complexin 2 ISO (MGI:MGI:2679622|PMID:11163241) SynGO PMID:11163241 MGI:MGI:2679622 NCBI chr 5:171,144,671...171,233,028
Ensembl chr 5:178,115,947...178,128,595
JBrowse link
G CPLX3 complexin 3 ISO (MGI:MGI:5818105|PMID:27239031) MGI PMID:27239031 MGI:MGI:5818105 NCBI chr15:53,769,138...53,774,330
Ensembl chr15:73,386,826...73,391,991
JBrowse link
G GRIK5 glutamate ionotropic receptor kainate type subunit 5 ISO (MGI:MGI:2449894|PMID:12533602) MGI PMID:12533602 MGI:MGI:2449894 NCBI chr19:38,886,108...38,956,938
Ensembl chr19:47,389,804...47,544,604
JBrowse link
G RAB3A RAB3A, member RAS oncogene family ISO (MGI:MGI:3762126|PMID:11359932)
(MGI:MGI:3653150|PMID:9194562)
MGI
ParkinsonsUK-UCL
PMID:9194562, PMID:11359932 MGI:MGI:3653150, MGI:MGI:3762126 NCBI chr19:17,672,661...17,679,541
Ensembl chr19:18,649,166...18,656,768
JBrowse link
regulation of synaptic vesicle priming term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NAPA NSF attachment protein alpha ISO (MGI:MGI:4879076|PMID:21040848) MGI
SynGO
PMID:21040848 MGI:MGI:4879076 NCBI chr19:44,479,871...44,507,315
Ensembl chr19:53,135,166...53,162,757
JBrowse link
G NAPB NSF attachment protein beta ISO (MGI:MGI:4879076|PMID:21040848) MGI
SynGO
PMID:21040848 MGI:MGI:4879076 NCBI chr20:23,316,153...23,363,142
Ensembl chr20:23,667,469...23,713,935
JBrowse link
G RAB3A RAB3A, member RAS oncogene family ISO PMID:21689256 UniProt PMID:21689256 RGD:14390056 NCBI chr19:17,672,661...17,679,541
Ensembl chr19:18,649,166...18,656,768
JBrowse link
G STX1A syntaxin 1A ISO (MGI:MGI:5521403|PMID:24133272) ParkinsonsUK-UCL PMID:24133272 MGI:MGI:5521403 Ensembl chr 7:80,852,495...80,862,255 JBrowse link
G STX1B syntaxin 1B ISO (MGI:MGI:5521403|PMID:24133272) ParkinsonsUK-UCL PMID:24133272 MGI:MGI:5521403 NCBI chr16:23,956,426...23,979,646
Ensembl chr16:31,356,907...31,378,870
JBrowse link
G STXBP1 syntaxin binding protein 1 ISO PMID:21689256 RGD
UniProt
PMID:19255244, PMID:21689256 RGD:14390056, RGD:2311128 NCBI chr 9:98,731,527...98,811,608
Ensembl chr 9:127,434,080...127,486,152
JBrowse link
G STXBP5 syntaxin binding protein 5 ISO (MGI:MGI:3814264|PMID:18936251) SynGO PMID:18936251 MGI:MGI:3814264 NCBI chr 6:145,006,696...145,192,467
Ensembl chr 6:149,719,064...149,902,662
JBrowse link
G UNC13A unc-13 homolog A ISO PMID:21689256 UniProt PMID:21689256 RGD:14390056 NCBI chr19:17,088,654...17,175,559
Ensembl chr19:18,068,006...18,150,642
JBrowse link
regulation of synaptic vesicle recycling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FGF14 fibroblast growth factor 14 ISO PMID:23831029 MGI PMID:23831029 RGD:10047342 NCBI chr13:82,869,491...83,563,099 JBrowse link
G VAMP2 vesicle associated membrane protein 2 ISO RGD PMID:21808019 RGD:13506237 NCBI chr17:43,495,464...43,499,348 JBrowse link
spontaneous exocytosis of neurotransmitter term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PRKACA protein kinase cAMP-activated catalytic subunit alpha ISO PMID:17190793 UniProt PMID:17190793 RGD:10047304 NCBI chr19:13,657,344...13,683,864
Ensembl chr19:14,385,191...14,406,205
JBrowse link
G SYT12 synaptotagmin 12 ISO PMID:17190793 GO_Central PMID:17190793 RGD:10047304 NCBI chr11:62,383,485...62,412,451
Ensembl chr11:65,709,808...65,733,010
JBrowse link
synaptic vesicle budding from endosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AP1S2 adaptor related protein complex 1 subunit sigma 2 ISO (MGI:MGI:5617942|PMID:20203623) SynGO PMID:20203623 MGI:MGI:5617942 NCBI chr  X:8,449,885...8,478,932
Ensembl chr  X:15,807,476...15,836,172
JBrowse link
G AP3B1 adaptor related protein complex 3 subunit beta 1 ISO (MGI:MGI:6189637|PMID:11588176) SynGO PMID:11588176 MGI:MGI:6189637 NCBI chr 5:37,015,518...37,305,769
Ensembl chr 5:37,503,162...37,840,205
JBrowse link
G AP3D1 adaptor related protein complex 3 subunit delta 1 ISO (MGI:MGI:6189637|PMID:11588176)
PMID:22539861
SynGO PMID:11588176, PMID:22539861 MGI:MGI:6189637, RGD:12050120 NCBI chr19:1,110,419...1,161,826
Ensembl chr19:2,085,540...2,137,593
JBrowse link
G BTBD8 BTB domain containing 8 ISO (MGI:MGI:6104538|PMID:29262337) MGI PMID:29262337 MGI:MGI:6104538 NCBI chr 1:94,739,780...94,843,172
Ensembl chr 1:93,569,680...93,587,229
JBrowse link
synaptic vesicle budding from presynaptic endocytic zone membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DNM1 dynamin 1 ISO (MGI:MGI:5285027|PMID:21689597) SynGO PMID:21689597 MGI:MGI:5285027 NCBI chr 9:99,324,385...99,376,262
Ensembl chr 9:128,004,508...128,044,690
JBrowse link
G DNM3 dynamin 3 ISO (MGI:MGI:5285027|PMID:21689597) SynGO PMID:21689597 MGI:MGI:5285027 NCBI chr 1:147,339,773...147,916,513
Ensembl chr 1:151,049,346...151,615,808
JBrowse link
G SNAP91 synaptosome associated protein 91 ISO (MGI:MGI:5707086|PMID:26412491) SynGO PMID:26412491 MGI:MGI:5707086 NCBI chr 6:81,441,792...81,600,505
Ensembl chr 6:84,720,850...84,874,407
JBrowse link
synaptic vesicle clustering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTNNB1 catenin beta 1 ISO (MGI:MGI:2680876|PMID:14622577) MGI PMID:14622577 MGI:MGI:2680876 NCBI chr 3:41,104,940...41,145,934
Ensembl chr 3:41,373,726...41,414,030
JBrowse link
G NLGN1 neuroligin 1 ISO (MGI:MGI:2665153|PMID:12796785), (MGI:MGI:3694190|PMID:10892652)
PMID:20534458
PMID:19628693
BHF-UCL PMID:10892652, PMID:12796785, PMID:19628693, PMID:20534458 MGI:MGI:2665153, MGI:MGI:3694190, RGD:10047242, RGD:8554760 NCBI chr 3:170,416,885...171,333,094
Ensembl chr 3:178,810,253...179,503,756
JBrowse link
G NRXN1 neurexin 1 ISO (MGI:MGI:2665153|PMID:12796785) BHF-UCL PMID:12796785 MGI:MGI:2665153 NCBI chr2A:50,063,398...51,178,659
Ensembl chr2A:50,985,067...52,091,277
JBrowse link
G PCLO piccolo presynaptic cytomatrix protein ISO (MGI:MGI:4442284|PMID:20332206) SynGO PMID:20332206 MGI:MGI:4442284 NCBI chr 7:74,714,364...75,126,518 JBrowse link
G RAB3A RAB3A, member RAS oncogene family ISO (MGI:MGI:4830800|PMID:20338242) UniProt PMID:20338242 MGI:MGI:4830800 NCBI chr19:17,672,661...17,679,541
Ensembl chr19:18,649,166...18,656,768
JBrowse link
G SYN1 synapsin I ISO (MGI:MGI:76610|PMID:7568108) SynGO PMID:7568108 MGI:MGI:76610 NCBI chr  X:40,007,777...40,055,801 JBrowse link
G SYN2 synapsin II ISO (MGI:MGI:3831450|PMID:18945891), (MGI:MGI:4830800|PMID:20338242) UniProt
SynGO
PMID:18945891, PMID:20338242 MGI:MGI:3831450, MGI:MGI:4830800 NCBI chr 3:11,935,680...12,118,981
Ensembl chr 3:12,282,573...12,464,413
JBrowse link
G SYN3 synapsin III ISO (MGI:MGI:2180939|PMID:12040043) SynGO PMID:12040043 MGI:MGI:2180939 NCBI chr22:13,517,932...14,069,661
Ensembl chr22:31,373,604...31,866,798
JBrowse link
G SYNDIG1 synapse differentiation inducing 1 ISO PMID:20152115 UniProt PMID:20152115 RGD:8554654 NCBI chr20:24,402,471...24,629,365
Ensembl chr20:24,825,380...24,947,370
JBrowse link
synaptic vesicle docking term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC100983301 C-terminal-binding protein 2 ISO (MGI:MGI:5784793|PMID:26929012) SynGO PMID:26929012 MGI:MGI:5784793 NCBI chr10:121,550,194...121,722,828
Ensembl chr10:125,814,926...125,901,248
JBrowse link
G PPFIA3 PTPRF interacting protein alpha 3 ISO (MGI:MGI:6120581|PMID:29439199) SynGO PMID:29439199 MGI:MGI:6120581 NCBI chr19:46,130,396...46,162,065
Ensembl chr19:55,056,824...55,089,124
JBrowse link
G RIMS1 regulating synaptic membrane exocytosis 1 ISO (MGI:MGI:4939085|PMID:21241895) MGI PMID:21241895 MGI:MGI:4939085 NCBI chr 6:69,714,807...70,231,260
Ensembl chr 6:73,008,176...73,523,422
JBrowse link
G RIMS2 regulating synaptic membrane exocytosis 2 ISO (MGI:MGI:4939085|PMID:21241895) MGI PMID:21241895 MGI:MGI:4939085 NCBI chr 8:100,156,403...100,894,128 JBrowse link
G STX1A syntaxin 1A ISO PMID:1321498 UniProt PMID:1321498 RGD:8553325 Ensembl chr 7:80,852,495...80,862,255 JBrowse link
G STX1B syntaxin 1B ISO (MGI:MGI:5603022|PMID:24587181)
(MGI:MGI:5521403|PMID:24133272)
ParkinsonsUK-UCL PMID:24133272, PMID:24587181 MGI:MGI:5521403, MGI:MGI:5603022 NCBI chr16:23,956,426...23,979,646
Ensembl chr16:31,356,907...31,378,870
JBrowse link
G STX4 syntaxin 4 ISO RGD PMID:7690687 RGD:68313 NCBI chr16:23,917,576...23,933,884
Ensembl chr16:31,400,915...31,411,364
JBrowse link
G SYDE1 synapse defective Rho GTPase homolog 1 ISO (MGI:MGI:5515279|PMID:23791195) MGI PMID:23791195 MGI:MGI:5515279 NCBI chr19:14,640,493...14,648,080
Ensembl chr19:15,625,096...15,631,600
JBrowse link
G UNC13A unc-13 homolog A ISO (MGI:MGI:4354715|PMID:19558619) MGI PMID:19558619 MGI:MGI:4354715 NCBI chr19:17,088,654...17,175,559
Ensembl chr19:18,068,006...18,150,642
JBrowse link
G UNC13B unc-13 homolog B ISO (MGI:MGI:4354715|PMID:19558619) MGI PMID:19558619 MGI:MGI:4354715 NCBI chr 9:35,011,350...35,255,148 JBrowse link
G VAMP2 vesicle associated membrane protein 2 ISO (MGI:MGI:5617001|PMID:25374362) SynGO PMID:25374362 MGI:MGI:5617001 NCBI chr17:43,495,464...43,499,348 JBrowse link
synaptic vesicle endocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTG1 actin gamma 1 ISO (MGI:MGI:6189485|PMID:27840001) SynGO PMID:27840001 MGI:MGI:6189485 NCBI chr17:75,965,911...75,968,822
Ensembl chr17:81,668,221...81,671,087
JBrowse link
G AMPH amphiphysin ISO (MGI:MGI:2176305|PMID:11879655) MGI PMID:11879655 MGI:MGI:2176305 NCBI chr 7:39,015,699...39,262,120
Ensembl chr 7:39,250,081...39,495,844
JBrowse link
G AP2B1 adaptor related protein complex 2 subunit beta 1 ISO (PMID:11102472) SynGO PMID:11102472 NCBI chr17:21,070,132...21,208,610
Ensembl chr17:21,363,121...21,501,721
JBrowse link
G AP2M1 adaptor related protein complex 2 subunit mu 1 ISO PMID:19321783 SynGO PMID:19321783 RGD:12050109 NCBI chr 3:181,210,045...181,219,327
Ensembl chr 3:189,692,898...189,702,261
JBrowse link
G ARF6 ADP ribosylation factor 6 ISO PMID:26731518 SynGO PMID:26731518 RGD:11556875 NCBI chr14:30,482,191...30,486,741
Ensembl chr14:48,789,329...48,789,856
JBrowse link
G BIN1 bridging integrator 1 ISO PMID:9348539 SynGO PMID:9348539 RGD:631926 NCBI chr2B:33,168,767...33,228,075
Ensembl chr2B:127,716,550...127,775,378
JBrowse link
G BTBD8 BTB domain containing 8 ISO (MGI:MGI:6104538|PMID:29262337) MGI PMID:29262337 MGI:MGI:6104538 NCBI chr 1:94,739,780...94,843,172
Ensembl chr 1:93,569,680...93,587,229
JBrowse link
G CANX calnexin ISO (MGI:MGI:5288282|PMID:21747946) SynGO PMID:21747946 MGI:MGI:5288282 NCBI chr 5:174,832,964...174,884,804
Ensembl chr 5:182,167,012...182,197,403
JBrowse link
G CD24 CD24 molecule ISO (MGI:MGI:3625625|PMID:16606832) MGI PMID:16606832 MGI:MGI:3625625 NCBI chr 6:104,783,720...104,789,509
Ensembl chr 6:108,655,624...108,657,847
JBrowse link
G CDK5 cyclin dependent kinase 5 ISO RGD PMID:12855954 RGD:1358501 NCBI chr 7:142,640,630...142,644,785
Ensembl chr 7:154,793,344...154,797,499
JBrowse link
G CLTC clathrin heavy chain ISO PMID:16982422 SynGO PMID:16982422 RGD:13702168 NCBI chr17:53,685,865...53,761,008
Ensembl chr17:58,529,750...58,603,636
JBrowse link
G DENND1A DENN domain containing 1A ISO (MGI:MGI:3694831|PMID:17182770) MGI PMID:17182770 MGI:MGI:3694831 NCBI chr 9:94,511,281...95,053,490
Ensembl chr 9:123,037,217...123,532,037
JBrowse link
G DNM1 dynamin 1 ISO (MGI:MGI:3709249|PMID:17463283) SynGO PMID:17463283 MGI:MGI:3709249 NCBI chr 9:99,324,385...99,376,262
Ensembl chr 9:128,004,508...128,044,690
JBrowse link
G DNM1L dynamin 1 like ISO PMID:23792689 SynGO PMID:23792689 RGD:12793033 NCBI chr12:53,476,553...53,541,421
Ensembl chr12:56,077,504...56,142,376
JBrowse link
G DNM2 dynamin 2 ISO (MGI:MGI:5285027|PMID:21689597) SynGO PMID:21689597 MGI:MGI:5285027 NCBI chr19:10,272,172...10,386,032
Ensembl chr19:10,933,672...11,106,478
JBrowse link
G DNM3 dynamin 3 ISO (MGI:MGI:5285027|PMID:21689597) SynGO PMID:21689597 MGI:MGI:5285027 NCBI chr 1:147,339,773...147,916,513
Ensembl chr 1:151,049,346...151,615,808
JBrowse link
G FCHO2 FCH and mu domain containing endocytic adaptor 2 ISO (MGI:MGI:5320276|PMID:20448150) ParkinsonsUK-UCL
SynGO
PMID:20448150 MGI:MGI:5320276, RGD:12050101 NCBI chr 5:42,223,201...42,361,317
Ensembl chr 5:42,824,621...42,958,565
JBrowse link
G GRN granulin precursor ISO RGD PMID:21813674 RGD:5509044 NCBI chr17:13,046,329...13,054,236
Ensembl chr17:13,211,784...13,219,609
JBrowse link
G ITSN1 intersectin 1 ISO (MGI:MGI:3811659|PMID:18676989) MGI PMID:18676989 MGI:MGI:3811659 NCBI chr21:20,009,385...20,266,835
Ensembl chr21:33,457,081...33,625,248
JBrowse link
G OPHN1 oligophrenin 1 ISO (MGI:MGI:4359148|PMID:19481455) MGI PMID:19481455 MGI:MGI:4359148 NCBI chr  X:57,288,297...57,674,685
Ensembl chr  X:67,359,364...67,739,114
JBrowse link
G PACSIN1 protein kinase C and casein kinase substrate in neurons 1 ISO (MGI:MGI:5304995|PMID:21926968) MGI PMID:21926968 MGI:MGI:5304995 NCBI chr 6:34,030,769...34,100,029
Ensembl chr 6:35,180,099...35,201,440
JBrowse link
G PICALM phosphatidylinositol binding clathrin assembly protein ISO PMID:21808019 SynGO PMID:21808019 RGD:13506237 NCBI chr11:81,011,324...81,122,352
Ensembl chr11:84,619,241...84,730,684
JBrowse link
G RAB27B RAB27B, member RAS oncogene family ISO PMID:20926670 SynGO PMID:20926670 RGD:13432355 NCBI chr18:48,099,912...48,274,416
Ensembl chr18:51,542,842...51,604,061
JBrowse link
G SCRIB scribble planar cell polarity protein ISO (MGI:MGI:4365512|PMID:19458197) SynGO PMID:19458197 MGI:MGI:4365512 NCBI chr 8:140,544,797...140,571,078
Ensembl chr 8:143,557,722...143,582,353
JBrowse link
G SH3GL2 SH3 domain containing GRB2 like 2, endophilin A1 ISO PMID:22099461
(MGI:MGI:4359148|PMID:19481455)
SynGO
MGI
PMID:19481455, PMID:22099461 MGI:MGI:4359148, RGD:13702445 NCBI chr 9:17,386,298...17,605,722
Ensembl chr 9:18,045,198...18,097,579
JBrowse link
G SNAP91 synaptosome associated protein 91 ISO PMID:21808019 SynGO PMID:21808019 RGD:13506237 NCBI chr 6:81,441,792...81,600,505
Ensembl chr 6:84,720,850...84,874,407
JBrowse link
G SNCA synuclein alpha ISO (MGI:MGI:5605098|PMID:25009269)
(MGI:MGI:3850310|PMID:18980610), (MGI:MGI:5605098|PMID:25009269)
SynGO PMID:18980610, PMID:25009269 MGI:MGI:3850310, MGI:MGI:5605098 NCBI chr 4:82,018,585...82,132,938
Ensembl chr 4:92,737,608...92,850,600
JBrowse link
G SNCB synuclein beta ISO (MGI:MGI:5605098|PMID:25009269) SynGO PMID:25009269 MGI:MGI:5605098 NCBI chr 5:171,918,297...171,928,672
Ensembl chr 5:178,988,439...178,998,800
JBrowse link
G STON2 stonin 2 ISO PMID:22727701
(PMID:21102408)
SynGO
UniProtKB
PMID:21102408, PMID:22727701 RGD:12050122 NCBI chr14:61,837,145...62,013,251
Ensembl chr14:81,037,200...81,210,807
JBrowse link
G STX1A syntaxin 1A ISO (PMID:26635000) UniProt PMID:26635000 Ensembl chr 7:80,852,495...80,862,255 JBrowse link
G SYNJ1 synaptojanin 1 ISO (MGI:MGI:3797309|PMID:18093523)
(PMID:18093523)
MGI
ParkinsonsUK-UCL
PMID:18093523 MGI:MGI:3797309 NCBI chr21:18,990,526...19,088,839
Ensembl chr21:32,368,949...32,466,994
JBrowse link
G SYP synaptophysin ISO (MGI:MGI:5141572|PMID:21658579) SynGO PMID:21658579 MGI:MGI:5141572 NCBI chr  X:41,487,538...41,500,039
Ensembl chr  X:49,340,021...49,352,420
JBrowse link
G TBC1D24 TBC1 domain family member 24 ISO (MGI:MGI:6279048|PMID:30335140) MGI PMID:30335140 MGI:MGI:6279048 NCBI chr16:1,331,630...1,362,320
Ensembl chr16:2,581,835...2,603,912
JBrowse link
G VAMP2 vesicle associated membrane protein 2 ISO (MGI:MGI:3573806|PMID:15475946) UniProt PMID:15475946 MGI:MGI:3573806 NCBI chr17:43,495,464...43,499,348 JBrowse link
synaptic vesicle exocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CPLX1 complexin 1 ISO (MGI:MGI:3688343|PMID:15126625) UniProtKB
RGD
PMID:11751907, PMID:15126625 MGI:MGI:3688343, RGD:727333 NCBI chr 4:889,037...930,046
Ensembl chr 4:819,833...858,953
JBrowse link
G CPLX2 complexin 2 ISO RGD PMID:11751907 RGD:727333 NCBI chr 5:171,144,671...171,233,028
Ensembl chr 5:178,115,947...178,128,595
JBrowse link
G CPLX3 complexin 3 ISO (MGI:MGI:3582382|PMID:15911881) UniProtKB PMID:15911881 MGI:MGI:3582382 NCBI chr15:53,769,138...53,774,330
Ensembl chr15:73,386,826...73,391,991
JBrowse link
G DOC2A double C2 domain alpha ISO RGD PMID:10651871 RGD:1357914 Ensembl chr16:30,378,922...30,384,142 JBrowse link
G OTOF otoferlin ISO (MGI:MGI:3774237|PMID:18287496)
(MGI:MGI:5660467|PMID:25609709)
(MGI:MGI:3692845|PMID:17055430)
UniProtKB
MGI
PMID:17055430, PMID:18287496, PMID:25609709 MGI:MGI:3692845, MGI:MGI:3774237, MGI:MGI:5660467 NCBI chr2A:26,454,010...26,555,642
Ensembl chr2A:26,546,959...26,647,278
JBrowse link
G P2RX7 purinergic receptor P2X 7 ISO (MGI:MGI:3529714|PMID:15713258) MGI PMID:15713258 MGI:MGI:3529714 NCBI chr12:118,731,761...118,786,039
Ensembl chr12:122,102,888...122,154,068
JBrowse link
G PPFIA3 PTPRF interacting protein alpha 3 ISO (MGI:MGI:6120581|PMID:29439199) SynGO PMID:29439199 MGI:MGI:6120581 NCBI chr19:46,130,396...46,162,065
Ensembl chr19:55,056,824...55,089,124
JBrowse link
G RAB3A RAB3A, member RAS oncogene family ISO PMID:16141272
(MGI:MGI:3762126|PMID:11359932)
ParkinsonsUK-UCL
MGI
PMID:11359932, PMID:16141272 MGI:MGI:3762126, RGD:8693376 NCBI chr19:17,672,661...17,679,541
Ensembl chr19:18,649,166...18,656,768
JBrowse link
G SNAP25 synaptosome associated protein 25 ISO (MGI:MGI:6189328|PMID:17728451)
PMID:8103915
SynGO PMID:8103915, PMID:17728451 MGI:MGI:6189328, RGD:13702457 NCBI chr20:10,164,236...10,252,856
Ensembl chr20:10,218,358...10,252,841
JBrowse link
G SNAPIN SNAP associated protein ISO (PMID:10195194) MGI PMID:10195194 NCBI chr 1:129,014,668...129,018,428
Ensembl chr 1:132,644,320...132,647,095
JBrowse link
G SNCA synuclein alpha ISO (PMID:28288128) UniProt PMID:28288128 NCBI chr 4:82,018,585...82,132,938
Ensembl chr 4:92,737,608...92,850,600
JBrowse link
G SPTBN2 spectrin beta, non-erythrocytic 2 ISO PMID:9826670 UniProt PMID:9826670 RGD:8553838 NCBI chr11:62,042,617...62,086,634
Ensembl chr11:65,365,588...65,409,207
JBrowse link
G STX1A syntaxin 1A ISO PMID:7901002
(MGI:MGI:5790510|PMID:27466336)
(PMID:26635000)
SynGO
UniProt
PMID:7901002, PMID:26635000, PMID:27466336 MGI:MGI:5790510, RGD:13702440 Ensembl chr 7:80,852,495...80,862,255 JBrowse link
G STX1B syntaxin 1B ISO (MGI:MGI:5790510|PMID:27466336) SynGO PMID:27466336 MGI:MGI:5790510 NCBI chr16:23,956,426...23,979,646
Ensembl chr16:31,356,907...31,378,870
JBrowse link
G SYT1 synaptotagmin 1 ISO (MGI:MGI:4879076|PMID:21040848) MGI PMID:21040848 MGI:MGI:4879076 NCBI chr12:76,392,955...76,981,800
Ensembl chr12:79,595,704...79,829,923
JBrowse link
G SYT10 synaptotagmin 10 NOT ISO (MGI:MGI:5751674|PMID:21496647) UniProtKB PMID:21496647 MGI:MGI:5751674 NCBI chr12:52,761,294...52,830,221
Ensembl chr12:55,364,714...55,429,298
JBrowse link
G TRIM9 tripartite motif containing 9 ISO RGD PMID:11524423 RGD:631246 NCBI chr14:31,577,859...31,844,298
Ensembl chr14:49,863,433...49,986,212
JBrowse link
G UNC13A unc-13 homolog A ISO (MGI:MGI:1341485|PMID:10440375) SynGO PMID:10440375 MGI:MGI:1341485 NCBI chr19:17,088,654...17,175,559
Ensembl chr19:18,068,006...18,150,642
JBrowse link
G UNC13B unc-13 homolog B ISO (MGI:MGI:5795822|PMID:19700493) SynGO PMID:19700493 MGI:MGI:5795822 NCBI chr 9:35,011,350...35,255,148 JBrowse link
G UNC13C unc-13 homolog C ISO (MGI:MGI:1929572|PMID:11150314) SynGO PMID:11150314 MGI:MGI:1929572 NCBI chr15:32,914,784...33,563,610 JBrowse link
G VAMP2 vesicle associated membrane protein 2 ISO (MGI:MGI:3573806|PMID:15475946)
PMID:1331807
(MGI:MGI:2153431|PMID:11691998)
UniProt
SynGO
MGI
PMID:1331807, PMID:11691998, PMID:15475946 MGI:MGI:2153431, MGI:MGI:3573806, RGD:13702243 NCBI chr17:43,495,464...43,499,348 JBrowse link
synaptic vesicle fusion to presynaptic active zone membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PRRT2 proline rich transmembrane protein 2 ISO (MGI:MGI:5792766|PMID:27052163) UniProtKB PMID:27052163 MGI:MGI:5792766 Ensembl chr16:30,183,352...30,187,862 JBrowse link
G SNAPIN SNAP associated protein ISO (MGI:MGI:4430710|PMID:19217378) MGI PMID:19217378 MGI:MGI:4430710 NCBI chr 1:129,014,668...129,018,428
Ensembl chr 1:132,644,320...132,647,095
JBrowse link
G STX1A syntaxin 1A ISO PMID:18703708 SynGO PMID:18703708 RGD:11535099 Ensembl chr 7:80,852,495...80,862,255 JBrowse link
G STX1B syntaxin 1B ISO (MGI:MGI:3803800|PMID:18703708), (MGI:MGI:5603022|PMID:24587181)
(MGI:MGI:5603022|PMID:24587181)
SynGO PMID:18703708, PMID:24587181 MGI:MGI:3803800, MGI:MGI:5603022 NCBI chr16:23,956,426...23,979,646
Ensembl chr16:31,356,907...31,378,870
JBrowse link
synaptic vesicle lumen acidification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CLCN3 chloride voltage-gated channel 3 ISO (MGI:MGI:2182197|PMID:11182090)
(MGI:MGI:5006894|PMID:21378974)
SynGO
MGI
PMID:11182090, PMID:21378974 MGI:MGI:2182197, MGI:MGI:5006894 NCBI chr 4:161,838,061...161,943,072
Ensembl chr 4:173,925,474...174,011,681
JBrowse link
G SLC17A7 solute carrier family 17 member 7 ISO (MGI:MGI:3836822|PMID:19169251) MGI PMID:19169251 MGI:MGI:3836822 NCBI chr19:46,443,076...46,455,195
Ensembl chr19:55,365,811...55,377,438
JBrowse link
synaptic vesicle priming term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CADPS calcium dependent secretion activator ISO (MGI:MGI:3773298|PMID:18022372)
(MGI:MGI:5617001|PMID:25374362)
(MGI:MGI:4879076|PMID:21040848)
SynGO
MGI
PMID:18022372, PMID:21040848, PMID:25374362 MGI:MGI:3773298, MGI:MGI:4879076, MGI:MGI:5617001 NCBI chr 3:62,321,496...62,797,298 JBrowse link
G CADPS2 calcium dependent secretion activator 2 ISO (MGI:MGI:6189303|PMID:25437547)
(MGI:MGI:5617001|PMID:25374362)
(MGI:MGI:4879076|PMID:21040848)
SynGO
MGI
PMID:21040848, PMID:25374362, PMID:25437547 MGI:MGI:4879076, MGI:MGI:5617001, MGI:MGI:6189303 NCBI chr 7:114,328,933...114,896,388
Ensembl chr 7:127,014,772...127,579,249
JBrowse link
G ERC1 ELKS/RAB6-interacting/CAST family member 1 ISO (MGI:MGI:5882646|PMID:27253063) SynGO PMID:27253063 MGI:MGI:5882646 NCBI chr12:1,066,034...1,597,562
Ensembl chr12:1,027,967...1,545,431
JBrowse link
G ERC2 ELKS/RAB6-interacting/CAST family member 2 ISO (MGI:MGI:4415657|PMID:19874790) SynGO PMID:19874790 MGI:MGI:4415657 NCBI chr 3:55,438,875...56,417,072
Ensembl chr 3:56,836,941...57,599,248
JBrowse link
G NAPA NSF attachment protein alpha ISO (MGI:MGI:4879076|PMID:21040848) MGI PMID:21040848 MGI:MGI:4879076 NCBI chr19:44,479,871...44,507,315
Ensembl chr19:53,135,166...53,162,757
JBrowse link
G OTOF otoferlin ISO (MGI:MGI:4461353|PMID:20562868) CACAO PMID:20562868 MGI:MGI:4461353 NCBI chr2A:26,454,010...26,555,642
Ensembl chr2A:26,546,959...26,647,278
JBrowse link
G RIMS1 regulating synaptic membrane exocytosis 1 ISO (MGI:MGI:4887275|PMID:21262469)
(MGI:MGI:4887275|PMID:21262469), (MGI:MGI:5432438|PMID:22753485)
SynGO PMID:21262469, PMID:22753485 MGI:MGI:4887275, MGI:MGI:5432438 NCBI chr 6:69,714,807...70,231,260
Ensembl chr 6:73,008,176...73,523,422
JBrowse link
G RIMS2 regulating synaptic membrane exocytosis 2 ISO (MGI:MGI:5432438|PMID:22753485) SynGO PMID:22753485 MGI:MGI:5432438 NCBI chr 8:100,156,403...100,894,128 JBrowse link
G SNCA synuclein alpha ISO (PMID:30404828) UniProt PMID:30404828 NCBI chr 4:82,018,585...82,132,938
Ensembl chr 4:92,737,608...92,850,600
JBrowse link
G STXBP1 syntaxin binding protein 1 ISO (MGI:MGI:3695670|PMID:17110441) SynGO PMID:17110441 MGI:MGI:3695670 NCBI chr 9:98,731,527...98,811,608
Ensembl chr 9:127,434,080...127,486,152
JBrowse link
G SV2A synaptic vesicle glycoprotein 2A ISO (MGI:MGI:3831988|PMID:19176798) SynGO PMID:19176798 MGI:MGI:3831988 NCBI chr 1:125,247,429...125,262,041
Ensembl chr 1:128,904,151...128,918,829
JBrowse link
G SYNJ1 synaptojanin 1 ISO (MGI:MGI:2447947|PMID:12481038) MGI PMID:12481038 MGI:MGI:2447947 NCBI chr21:18,990,526...19,088,839
Ensembl chr21:32,368,949...32,466,994
JBrowse link
G UNC13A unc-13 homolog A ISO (MGI:MGI:2158113|PMID:11832228)
(MGI:MGI:5617001|PMID:25374362)
ParkinsonsUK-UCL
SynGO
RGD
PMID:11832228, PMID:21499244, PMID:25374362 MGI:MGI:2158113, MGI:MGI:5617001, RGD:5686389 NCBI chr19:17,088,654...17,175,559
Ensembl chr19:18,068,006...18,150,642
JBrowse link
G UNC13B unc-13 homolog B ISO PMID:22966208
(MGI:MGI:5617001|PMID:25374362)
(MGI:MGI:2181453|PMID:12070347)
(MGI:MGI:2158113|PMID:11832228)
ParkinsonsUK-UCL
SynGO
MGI
PMID:11832228, PMID:12070347, PMID:22966208, PMID:25374362 MGI:MGI:2158113, MGI:MGI:2181453, MGI:MGI:5617001, RGD:11535109 NCBI chr 9:35,011,350...35,255,148 JBrowse link
G UNC13C unc-13 homolog C ISO PMID:22966208 ParkinsonsUK-UCL PMID:22966208 RGD:11535109 NCBI chr15:32,914,784...33,563,610 JBrowse link
synaptic vesicle recycling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AP1S2 adaptor related protein complex 1 subunit sigma 2 ISO (MGI:MGI:5617942|PMID:20203623) MGI PMID:20203623 MGI:MGI:5617942 NCBI chr  X:8,449,885...8,478,932
Ensembl chr  X:15,807,476...15,836,172
JBrowse link
G RAB3A RAB3A, member RAS oncogene family ISO PMID:16141272 ParkinsonsUK-UCL PMID:16141272 RGD:8693376 NCBI chr19:17,672,661...17,679,541
Ensembl chr19:18,649,166...18,656,768
JBrowse link
G RAB5A RAB5A, member RAS oncogene family ISO (PMID:16141272) ParkinsonsUK-UCL PMID:16141272 NCBI chr 3:19,866,110...19,903,701
Ensembl chr 3:20,197,067...20,234,579
JBrowse link
G SYT7 synaptotagmin 7 ISO (MGI:MGI:5560382|PMID:24569478) UniProtKB PMID:24569478 MGI:MGI:5560382 NCBI chr11:56,814,694...56,880,439 JBrowse link
synaptic vesicle recycling via endosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCL2L1 BCL2 like 1 ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr20:27,955,688...28,015,950
Ensembl chr20:29,088,055...29,146,585
JBrowse link
G BTBD8 BTB domain containing 8 ISO (MGI:MGI:6104538|PMID:29262337) UniProt PMID:29262337 MGI:MGI:6104538 NCBI chr 1:94,739,780...94,843,172
Ensembl chr 1:93,569,680...93,587,229
JBrowse link
G DNM1L dynamin 1 like ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr12:53,476,553...53,541,421
Ensembl chr12:56,077,504...56,142,376
JBrowse link
synaptic vesicle targeting term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NLGN1 neuroligin 1 ISO (MGI:MGI:3694190|PMID:10892652) UniProtKB PMID:10892652 MGI:MGI:3694190 NCBI chr 3:170,416,885...171,333,094
Ensembl chr 3:178,810,253...179,503,756
JBrowse link
G PSEN1 presenilin 1 ISO (MGI:MGI:2664026|PMID:12805290) MGI PMID:12805290 MGI:MGI:2664026 NCBI chr14:53,718,299...53,802,684
Ensembl chr14:72,579,024...72,663,876
JBrowse link
G SCRIB scribble planar cell polarity protein ISO (MGI:MGI:4365512|PMID:19458197) UniProtKB PMID:19458197 MGI:MGI:4365512 NCBI chr 8:140,544,797...140,571,078
Ensembl chr 8:143,557,722...143,582,353
JBrowse link
synaptic vesicle uncoating term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DNAJC6 DnaJ heat shock protein family (Hsp40) member C6 ISO (MGI:MGI:4439191|PMID:20160091) SynGO PMID:20160091 MGI:MGI:4439191 NCBI chr 1:64,501,805...64,662,999
Ensembl chr 1:66,399,968...66,550,879
JBrowse link
G SH3GL1 SH3 domain containing GRB2 like 1, endophilin A2 ISO (MGI:MGI:5300660|PMID:22099461) SynGO PMID:22099461 MGI:MGI:5300660 NCBI chr19:3,383,267...3,423,165
Ensembl chr19:4,329,750...4,340,121
JBrowse link
G SH3GL2 SH3 domain containing GRB2 like 2, endophilin A1 ISO (MGI:MGI:5300660|PMID:22099461) SynGO PMID:22099461 MGI:MGI:5300660 NCBI chr 9:17,386,298...17,605,722
Ensembl chr 9:18,045,198...18,097,579
JBrowse link
G SH3GL3 SH3 domain containing GRB2 like 3, endophilin A3 ISO (MGI:MGI:5300660|PMID:22099461) SynGO PMID:22099461 MGI:MGI:5300660 NCBI chr15:61,988,584...62,153,543
Ensembl chr15:81,337,529...81,501,770
JBrowse link
G SYNJ1 synaptojanin 1 ISO (MGI:MGI:1346710|PMID:10535736), (MGI:MGI:5300660|PMID:22099461)
(MGI:MGI:2447947|PMID:12481038)
MGI
SynGO
PMID:10535736, PMID:12481038, PMID:22099461 MGI:MGI:1346710, MGI:MGI:2447947, MGI:MGI:5300660 NCBI chr21:18,990,526...19,088,839
Ensembl chr21:32,368,949...32,466,994
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12561
    localization 4922
      establishment of localization 3510
        establishment of localization in cell 1681
          synaptic vesicle cycle 212
            neurotransmitter loading into synaptic vesicle + 9
            regulation of synaptic vesicle cycle + 12
            synaptic vesicle clustering + 18
            synaptic vesicle exocytosis + 130
            synaptic vesicle lumen acidification + 2
            synaptic vesicle recycling + 67
Path 2
Term Annotations click to browse term
  biological_process 12561
    localization 4922
      establishment of localization 3510
        transport 3358
          vesicle-mediated transport 1145
            vesicle-mediated transport in synapse 244
              synaptic vesicle cycle 212
                neurotransmitter loading into synaptic vesicle + 9
                regulation of synaptic vesicle cycle + 12
                synaptic vesicle clustering + 18
                synaptic vesicle exocytosis + 130
                synaptic vesicle lumen acidification + 2
                synaptic vesicle recycling + 67
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.