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ONTOLOGY REPORT - ANNOTATIONS


Term:synaptic vesicle cycle
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Accession:GO:0099504 term browser browse the term
Definition:A biological process in which synaptic vesicles are loaded with neurotransmitters, move to the active zone, exocytose and are then recycled via endocytosis, ultimately leading to reloading with neurotransmitters.


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synaptic vesicle cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BRSK1 BR serine/threonine kinase 1 IEA Ensembl GO_REF:0000107 NCBI chr 6:59,468,289...59,499,062
Ensembl chr 6:59,468,146...59,501,129
JBrowse link
G STXBP5 syntaxin binding protein 5 ISO PMID:27807164 SynGO PMID:27807164 RGD:13702312 NCBI chr 1:18,343,826...18,512,750
Ensembl chr 1:18,345,363...18,513,252
JBrowse link
G SYN1 synapsin I ISO (MGI:MGI:63816|PMID:7902212) MGI PMID:7902212 MGI:MGI:63816 NCBI chr  X:42,090,245...42,142,254
Ensembl chr  X:42,090,245...42,142,224
JBrowse link
G SYN2 synapsin II ISO (MGI:MGI:74599|PMID:7777057) SynGO PMID:7777057 MGI:MGI:74599 NCBI chr13:68,050,015...68,221,504
Ensembl chr13:68,050,186...68,221,496
JBrowse link
G SYN3 synapsin III ISO (MGI:MGI:2180939|PMID:12040043) SynGO PMID:12040043 MGI:MGI:2180939 NCBI chr 5:12,017,741...12,501,995
Ensembl chr 5:12,017,784...12,578,953
JBrowse link
aminergic neurotransmitter loading into synaptic vesicle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DDC dopa decarboxylase ISO RGD PMID:19903816 RGD:5128868 NCBI chr 9:136,496,364...136,571,220
Ensembl chr 9:136,495,891...136,571,197
JBrowse link
G SLC18A1 solute carrier family 18 member A1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr14:4,243,553...4,279,341
Ensembl chr14:4,243,557...4,278,989
JBrowse link
G SLC18A2 solute carrier family 18 member A2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr14:127,357,605...127,394,242
Ensembl chr14:127,357,555...127,396,533
JBrowse link
G TH tyrosine hydroxylase ISO RGD PMID:19903816 RGD:5128868 NCBI chr 2:1,499,628...1,506,180
Ensembl chr 2:1,499,618...1,506,615
JBrowse link
calcium ion-regulated exocytosis of neurotransmitter term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CACNA1A calcium voltage-gated channel subunit alpha1 A ISO (MGI:MGI:1353373|PMID:10670432) MGI PMID:10670432 MGI:MGI:1353373 NCBI chr 2:65,491,784...65,871,068 JBrowse link
G DOC2B double C2 domain beta IEA Ensembl GO_REF:0000107 NCBI chr12:47,529,383...47,558,236
Ensembl chr12:47,529,566...47,562,373
JBrowse link
G RIMS1 regulating synaptic membrane exocytosis 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:51,785,140...52,246,456
Ensembl chr 1:51,785,495...52,244,934
JBrowse link
G RIMS2 regulating synaptic membrane exocytosis 2 IBA
IEA
(PMID:21873635) GO_Central
InterPro
PMID:21873635 GO_REF:0000002 NCBI chr 4:32,999,615...33,613,413
Ensembl chr 4:32,999,613...33,613,469
JBrowse link
G RIMS3 regulating synaptic membrane exocytosis 3 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:170,506,392...170,546,939
Ensembl chr 6:170,506,426...170,546,939
JBrowse link
G SNAP25 synaptosome associated protein 25 ISO RGD PMID:14980208 RGD:1581082 NCBI chr17:19,096,115...19,227,580
Ensembl chr17:19,096,140...19,227,576
JBrowse link
G STX1A syntaxin 1A ISO (MGI:MGI:3803800|PMID:18703708) ParkinsonsUK-UCL PMID:18703708 MGI:MGI:3803800 NCBI chr 3:10,974,127...10,991,846
Ensembl chr 3:10,974,126...10,991,874
JBrowse link
G STX1B syntaxin 1B IEA Ensembl GO_REF:0000107 NCBI chr 3:17,439,563...17,459,517
Ensembl chr 3:17,439,581...17,459,516
JBrowse link
G SYT1 synaptotagmin 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:101,871,313...102,394,310
Ensembl chr 5:101,871,312...102,020,847
JBrowse link
G SYT10 synaptotagmin 10 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:40,869,418...40,940,851
Ensembl chr 5:40,872,283...40,934,326
JBrowse link
G SYT12 synaptotagmin 12 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:5,410,605...5,434,492
Ensembl chr 2:5,410,624...5,433,929
JBrowse link
G SYT17 synaptotagmin 17 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 3:26,447,303...26,548,362
Ensembl chr 3:26,446,920...26,525,186
JBrowse link
G SYT2 synaptotagmin 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr10:24,638,645...24,727,198
Ensembl chr10:24,638,704...24,669,846
JBrowse link
G SYT3 synaptotagmin 3 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:55,417,949...55,449,322
Ensembl chr 6:55,417,950...55,449,322
JBrowse link
G SYT5 synaptotagmin 5 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:59,381,649...59,389,014
Ensembl chr 6:59,381,653...59,388,960
JBrowse link
G SYT6 synaptotagmin 6 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:106,420,614...106,485,468
Ensembl chr 4:106,425,692...106,486,931
JBrowse link
G SYT7 synaptotagmin 7 IEA Ensembl GO_REF:0000107 NCBI chr 2:9,947,962...10,012,713
Ensembl chr 2:9,947,925...10,012,521
JBrowse link
G SYT8 synaptotagmin 8 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:1,245,988...1,250,422
Ensembl chr 2:1,248,077...1,250,129
JBrowse link
G SYT9 synaptotagmin 9 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:2,191,757...2,395,157
Ensembl chr 9:2,191,751...2,394,103
JBrowse link
calcium-dependent activation of synaptic vesicle fusion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PRRT2 proline rich transmembrane protein 2 ISO (MGI:MGI:5792766|PMID:27052163) SynGO PMID:27052163 MGI:MGI:5792766 NCBI chr 3:18,048,614...18,052,481 JBrowse link
G SYT1 synaptotagmin 1 ISO (MGI:MGI:69538|PMID:7954835) SynGO PMID:7954835 MGI:MGI:69538 NCBI chr 5:101,871,313...102,394,310
Ensembl chr 5:101,871,312...102,020,847
JBrowse link
G SYT2 synaptotagmin 2 ISO (MGI:MGI:3695515|PMID:17192432) SynGO PMID:17192432 MGI:MGI:3695515 NCBI chr10:24,638,645...24,727,198
Ensembl chr10:24,638,704...24,669,846
JBrowse link
G SYT7 synaptotagmin 7 IEA Ensembl GO_REF:0000107 NCBI chr 2:9,947,962...10,012,713
Ensembl chr 2:9,947,925...10,012,521
JBrowse link
G SYT9 synaptotagmin 9 ISO (MGI:MGI:3714434|PMID:17521570) SynGO PMID:17521570 MGI:MGI:3714434 NCBI chr 9:2,191,757...2,395,157
Ensembl chr 9:2,191,751...2,394,103
JBrowse link
clathrin-dependent synaptic vesicle endocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ITSN2 intersectin 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 3:114,363,319...114,508,447
Ensembl chr 3:114,363,528...114,508,445
JBrowse link
G KIAA1107 KIAA1107 ortholog IEA InterPro GO_REF:0000002 NCBI chr 4:124,859,271...124,950,420
Ensembl chr 4:124,858,099...124,950,427
JBrowse link
fast, calcium ion-dependent exocytosis of neurotransmitter term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SYT1 synaptotagmin 1 IEA Ensembl GO_REF:0000107 NCBI chr 5:101,871,313...102,394,310
Ensembl chr 5:101,871,312...102,020,847
JBrowse link
induction of synaptic vesicle exocytosis by positive regulation of presynaptic cytosolic calcium ion concentration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CACNA1D calcium voltage-gated channel subunit alpha1 D IEA GOC GO_REF:0000108 NCBI chr13:35,568,534...35,911,483
Ensembl chr13:35,436,519...35,909,662
JBrowse link
G CACNB2 calcium voltage-gated channel auxiliary subunit beta 2 IEA GOC GO_REF:0000108 NCBI chr10:44,321,954...44,887,410
Ensembl chr10:44,421,666...44,885,424
JBrowse link
negative regulation of synaptic vesicle clustering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PTEN phosphatase and tensin homolog ISO (MGI:MGI:3629385|PMID:16675393), (MGI:MGI:3772418|PMID:18082964) CACAO PMID:16675393, PMID:18082964 MGI:MGI:3629385, MGI:MGI:3772418 NCBI chr14:99,929,590...100,021,619 JBrowse link
negative regulation of synaptic vesicle endocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SYT11 synaptotagmin 11 ISO PMID:26589353 ParkinsonsUK-UCL PMID:26589353 RGD:11079192 NCBI chr 4:94,139,345...94,163,091
Ensembl chr 4:94,139,347...94,163,050
JBrowse link
negative regulation of synaptic vesicle exocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BRAF B-Raf proto-oncogene, serine/threonine kinase IEA Ensembl GO_REF:0000107 NCBI chr18:8,957,963...9,132,558
Ensembl chr18:8,957,959...9,132,553
JBrowse link
G FMR1 FMRP translational regulator 1 ISO PMID:24709664 UniProt PMID:24709664 RGD:11059581 NCBI chr  X:120,361,232...120,400,282
Ensembl chr  X:120,361,229...120,399,835
JBrowse link
G RAP1A RAP1A, member of RAS oncogene family IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:108,675,537...108,750,952
Ensembl chr 4:108,676,685...108,749,725
JBrowse link
G RAP1B RAP1B, member of RAS oncogene family IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr 5:32,910,181...32,961,972
Ensembl chr 5:32,910,259...32,964,879
JBrowse link
G SYT4 synaptotagmin 4 IEA Ensembl GO_REF:0000107 NCBI chr 6:127,382,248...127,392,258
Ensembl chr 6:127,382,260...127,392,167
JBrowse link
negative regulation of synaptic vesicle recycling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CYFIP1 cytoplasmic FMR1 interacting protein 1 ISO RGD PMID:26843638 RGD:11342679 NCBI chr15:32,064,431...32,175,095 JBrowse link
G STX1A syntaxin 1A ISO (MGI:MGI:5603022|PMID:24587181) ParkinsonsUK-UCL PMID:24587181 MGI:MGI:5603022 NCBI chr 3:10,974,127...10,991,846
Ensembl chr 3:10,974,126...10,991,874
JBrowse link
G STX1B syntaxin 1B IEA Ensembl GO_REF:0000107 NCBI chr 3:17,439,563...17,459,517
Ensembl chr 3:17,439,581...17,459,516
JBrowse link
neurotransmitter loading into synaptic vesicle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SLC17A6 solute carrier family 17 member 6 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:37,098,983...37,138,935
Ensembl chr 2:37,098,992...37,138,475
JBrowse link
G SLC17A7 solute carrier family 17 member 7 IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr 6:54,511,121...54,521,616
Ensembl chr 6:54,511,121...54,521,611
JBrowse link
G SLC17A8 solute carrier family 17 member 8 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:83,741,641...83,809,472
Ensembl chr 5:83,741,715...83,800,809
JBrowse link
G SLC18A2 solute carrier family 18 member A2 ISO (MGI:MGI:1194523|PMID:9427251) SynGO PMID:9427251 MGI:MGI:1194523 NCBI chr14:127,357,605...127,394,242
Ensembl chr14:127,357,555...127,396,533
JBrowse link
G SLC18A3 solute carrier family 18 member A3 ISO (MGI:MGI:6189683|PMID:4075114)
PMID:9182805
SynGO PMID:4075114, PMID:9182805 MGI:MGI:6189683, RGD:13702424 NCBI chr14:90,113,534...90,115,813
Ensembl chr14:90,113,844...90,115,430
JBrowse link
G SLC32A1 solute carrier family 32 member 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr17:41,689,479...41,694,560
Ensembl chr17:41,689,479...41,694,553
JBrowse link
positive regulation of calcium ion-dependent exocytosis of neurotransmitter term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SYT1 synaptotagmin 1 IEA Ensembl GO_REF:0000107 NCBI chr 5:101,871,313...102,394,310
Ensembl chr 5:101,871,312...102,020,847
JBrowse link
positive regulation of synaptic vesicle clustering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCL2L1 BCL2 like 1 ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr17:35,366,139...35,415,798
Ensembl chr17:35,366,141...35,415,359
JBrowse link
G CDH2 cadherin 2 IEA Ensembl GO_REF:0000107 NCBI chr 6:112,396,713...112,629,073
Ensembl chr 6:112,396,721...112,628,432
JBrowse link
G MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 IEA Ensembl GO_REF:0000107 NCBI chr 9:100,846,693...102,171,199
Ensembl chr 9:100,847,212...102,169,003
JBrowse link
G NLGN1 neuroligin 1 IEA Ensembl GO_REF:0000107 NCBI chr13:111,851,007...112,727,202
Ensembl chr13:112,036,053...112,725,618
JBrowse link
G NLGN3 neuroligin 3 IEA Ensembl GO_REF:0000107 NCBI chr  X:57,174,506...57,204,770
Ensembl chr  X:57,176,103...57,201,486
JBrowse link
G PICALM phosphatidylinositol binding clathrin assembly protein ISO RGD PMID:22851330 RGD:13506174 NCBI chr 9:19,835,934...19,947,239
Ensembl chr 9:19,835,938...20,104,632
JBrowse link
G SNAP91 synaptosome associated protein 91 ISO RGD PMID:22851330 RGD:13506174 NCBI chr 1:82,540,998...82,698,652
Ensembl chr 1:82,540,985...82,697,342
JBrowse link
positive regulation of synaptic vesicle endocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AP2M1 adaptor related protein complex 2 subunit mu 1 ISO RGD PMID:19762466 RGD:13461856 NCBI chr13:122,094,375...122,103,408
Ensembl chr13:122,089,938...122,104,805
JBrowse link
G BCL2L1 BCL2 like 1 ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr17:35,366,139...35,415,798
Ensembl chr17:35,366,141...35,415,359
JBrowse link
G DNM1 dynamin 1 ISO RGD PMID:17437541 RGD:8554440 NCBI chr 1:268,653,045...268,702,233
Ensembl chr 1:268,653,039...268,702,223
JBrowse link
G DNM1L dynamin 1 like ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr 5:41,571,054...41,636,058 JBrowse link
G LRRK2 leucine rich repeat kinase 2 ISO RGD PMID:18445495 RGD:13462049 NCBI chr 5:71,800,337...71,945,828
Ensembl chr 5:71,800,240...71,944,938
JBrowse link
G MFF mitochondrial fission factor ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr15:128,768,441...128,799,355
Ensembl chr15:128,768,348...128,799,345
JBrowse link
G NLGN1 neuroligin 1 IEA Ensembl GO_REF:0000107 NCBI chr13:111,851,007...112,727,202
Ensembl chr13:112,036,053...112,725,618
JBrowse link
G PICALM phosphatidylinositol binding clathrin assembly protein ISO RGD PMID:21808019 RGD:13506237 NCBI chr 9:19,835,934...19,947,239
Ensembl chr 9:19,835,938...20,104,632
JBrowse link
G PPP3CC protein phosphatase 3 catalytic subunit gamma ISO RGD PMID:26627835 RGD:11532172 NCBI chr14:6,711,789...6,799,318
Ensembl chr14:6,639,206...6,803,670
JBrowse link
G SH3GL1 SH3 domain containing GRB2 like 1, endophilin A2 ISO RGD PMID:14532001 RGD:13464359 NCBI chr 2:74,414,453...74,445,450
Ensembl chr 2:74,414,465...74,449,433
JBrowse link
G SNAP91 synaptosome associated protein 91 ISO RGD PMID:21808019 RGD:13506237 NCBI chr 1:82,540,998...82,698,652
Ensembl chr 1:82,540,985...82,697,342
JBrowse link
G TOR1A torsin family 1 member A IEA Ensembl GO_REF:0000107 NCBI chr 1:269,975,919...269,985,478
Ensembl chr 1:269,974,892...269,985,508
JBrowse link
positive regulation of synaptic vesicle exocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCL2L1 BCL2 like 1 ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr17:35,366,139...35,415,798
Ensembl chr17:35,366,141...35,415,359
JBrowse link
G DNM1L dynamin 1 like ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr 5:41,571,054...41,636,058 JBrowse link
G NLGN1 neuroligin 1 IEA Ensembl GO_REF:0000107 NCBI chr13:111,851,007...112,727,202
Ensembl chr13:112,036,053...112,725,618
JBrowse link
G SLC4A8 solute carrier family 4 member 8 IEA Ensembl GO_REF:0000107 NCBI chr 5:16,842,667...16,921,669
Ensembl chr 5:16,842,710...16,977,611
JBrowse link
positive regulation of synaptic vesicle priming term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RIMS1 regulating synaptic membrane exocytosis 1 ISO PMID:21262469 ParkinsonsUK-UCL PMID:21262469 RGD:10047275 NCBI chr 1:51,785,140...52,246,456
Ensembl chr 1:51,785,495...52,244,934
JBrowse link
G UNC13B unc-13 homolog B ISO PMID:21262469 ParkinsonsUK-UCL PMID:21262469 RGD:10047275 NCBI chr 1:235,918,751...236,158,098 JBrowse link
positive regulation of synaptic vesicle recycling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CAAP1 caspase activity and apoptosis inhibitor 1 IEA Ensembl GO_REF:0000107 NCBI chr 1:196,229,512...196,273,770
Ensembl chr 1:196,176,256...196,274,058
JBrowse link
G DNM1 dynamin 1 ISO RGD PMID:17880892 RGD:8553820 NCBI chr 1:268,653,045...268,702,233
Ensembl chr 1:268,653,039...268,702,223
JBrowse link
G DNM3 dynamin 3 ISO RGD PMID:23687302 RGD:13462065 NCBI chr 9:114,262,782...114,805,252
Ensembl chr 9:114,262,782...114,805,242
JBrowse link
G PLAA phospholipase A2 activating protein IEA Ensembl GO_REF:0000107 NCBI chr 1:196,176,004...196,219,614
Ensembl chr 1:196,176,256...196,274,058
JBrowse link
presynaptic dense core vesicle exocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CADPS calcium dependent secretion activator IEA Ensembl GO_REF:0000107 NCBI chr13:43,979,694...44,482,985 JBrowse link
G STXBP1 syntaxin binding protein 1 IEA Ensembl GO_REF:0000107 NCBI chr 1:268,116,124...268,205,805
Ensembl chr 1:268,116,118...268,213,921
JBrowse link
G SYT6 synaptotagmin 6 ISO PMID:26216953 SynGO PMID:26216953 RGD:13702162 NCBI chr 4:106,420,614...106,485,468
Ensembl chr 4:106,425,692...106,486,931
JBrowse link
G UNC13A unc-13 homolog A ISO (MGI:MGI:5819330|PMID:26575293) SynGO PMID:26575293 MGI:MGI:5819330 NCBI chr 2:60,057,926...60,130,015 JBrowse link
G UNC13B unc-13 homolog B IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:235,918,751...236,158,098 JBrowse link
regulation of calcium ion-dependent exocytosis of neurotransmitter term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP2A2 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2 IEA Ensembl GO_REF:0000107 NCBI chr14:31,674,659...31,744,981
Ensembl chr14:31,674,757...31,744,973
JBrowse link
G RAB3GAP1 RAB3 GTPase activating protein catalytic subunit 1 IEA Ensembl GO_REF:0000107 NCBI chr15:16,756,368...16,893,148
Ensembl chr15:16,753,877...16,816,754
JBrowse link
regulation of neurotransmitter loading into synaptic vesicle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SLC10A4 solute carrier family 10 member 4 ISO (MGI:MGI:5913479|PMID:25176177) SynGO PMID:25176177 MGI:MGI:5913479 NCBI chr 8:38,378,878...38,385,748
Ensembl chr 8:38,378,798...38,386,195
JBrowse link
regulation of presynaptic dense core granule exocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G P2RX7 purinergic receptor P2X 7 ISO PMID:24037803 SynGO PMID:24037803 RGD:13702177 NCBI chr14:31,415,188...31,476,502
Ensembl chr14:31,415,192...31,476,472
JBrowse link
G SYT4 synaptotagmin 4 ISO (MGI:MGI:4457852|PMID:19448629) SynGO PMID:19448629 MGI:MGI:4457852 NCBI chr 6:127,382,248...127,392,258
Ensembl chr 6:127,382,260...127,392,167
JBrowse link
regulation of recycling endosome localization within postsynapse term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GRIPAP1 GRIP1 associated protein 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:43,043,613...43,070,363
Ensembl chr  X:43,043,029...43,070,669
JBrowse link
regulation of synaptic vesicle budding from presynaptic endocytic zone membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SLC2A4 solute carrier family 2 member 4 ISO PMID:28111082 SynGO PMID:28111082 RGD:13702195 NCBI chr12:52,628,746...52,634,965
Ensembl chr12:52,628,450...52,634,967
JBrowse link
regulation of synaptic vesicle clustering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PCDH17 protocadherin 17 IEA Ensembl GO_REF:0000107 NCBI chr11:30,510,779...30,611,732
Ensembl chr11:30,511,261...30,611,727
JBrowse link
regulation of synaptic vesicle cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BSN bassoon presynaptic cytomatrix protein ISO (MGI:MGI:4879069|PMID:21092860) SynGO PMID:21092860 MGI:MGI:4879069 NCBI chr13:32,106,967...32,203,461
Ensembl chr13:32,107,077...32,203,459
JBrowse link
G CDK5R1 cyclin dependent kinase 5 regulatory subunit 1 ISO PMID:24254883 SynGO PMID:24254883 RGD:13702178 NCBI chr12:42,456,063...42,494,494
Ensembl chr12:42,493,321...42,494,659
JBrowse link
G DNAJC5 DnaJ heat shock protein family (Hsp40) member C5 IEA Ensembl GO_REF:0000107 NCBI chr17:62,754,630...62,780,470
Ensembl chr17:62,773,940...62,777,311
JBrowse link
G NRXN1 neurexin 1 ISO (MGI:MGI:4366191|PMID:19822762) SynGO PMID:19822762 MGI:MGI:4366191 NCBI chr 3:89,799,426...90,914,205
Ensembl chr 3:89,799,543...90,914,205
JBrowse link
G PLD1 phospholipase D1 IEA Ensembl GO_REF:0000107 NCBI chr13:110,152,268...110,376,319
Ensembl chr13:110,087,051...110,376,319
JBrowse link
G PLS3 plastin 3 ISO (MGI:MGI:5469774|PMID:23263861) SynGO PMID:23263861 MGI:MGI:5469774 NCBI chr  X:94,885,098...94,971,664
Ensembl chr  X:94,885,118...94,971,664
JBrowse link
G PRKAR1B protein kinase cAMP-dependent type I regulatory subunit beta IEA Ensembl GO_REF:0000107 NCBI chr 3:343,124...425,154
Ensembl chr 3:327,199...425,165
JBrowse link
G RAB3B RAB3B, member RAS oncogene family IEA Ensembl GO_REF:0000107 NCBI chr 6:160,194,488...160,255,635
Ensembl chr 6:160,202,562...160,255,632
JBrowse link
G RAPGEF4 Rap guanine nucleotide exchange factor 4 IEA Ensembl GO_REF:0000107 NCBI chr15:78,773,270...79,094,490
Ensembl chr15:78,773,285...79,095,041
JBrowse link
G SNAP29 synaptosome associated protein 29 ISO PMID:15890653 SynGO PMID:15890653 RGD:13702146 NCBI chr14:50,492,187...50,511,475
Ensembl chr14:50,492,154...50,511,456
JBrowse link
G SYN1 synapsin I IEA Ensembl GO_REF:0000107 NCBI chr  X:42,090,245...42,142,254
Ensembl chr  X:42,090,245...42,142,224
JBrowse link
regulation of synaptic vesicle docking term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CAMK2A calcium/calmodulin dependent protein kinase II alpha IEA Ensembl GO_REF:0000107 NCBI chr 2:151,248,356...151,353,907
Ensembl chr 2:151,248,356...151,308,658
JBrowse link
regulation of synaptic vesicle endocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BTBD9 BTB domain containing 9 IEA Ensembl GO_REF:0000107 NCBI chr 7:33,723,077...34,122,673
Ensembl chr 7:33,720,013...34,122,662
JBrowse link
G CALM1 calmodulin 1 ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr 7:112,160,823...112,171,754
Ensembl chr 7:112,154,880...112,171,744
JBrowse link
G CALM2 calmodulin 2 ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr 3:93,371,765...93,386,378
Ensembl chr 3:93,372,045...93,438,068
JBrowse link
G CALM3 calmodulin 3 ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr 6:52,506,979...52,516,704
Ensembl chr 6:52,506,674...52,516,703
JBrowse link
G DGKQ diacylglycerol kinase theta ISO (MGI:MGI:5807028|PMID:26748701) SynGO PMID:26748701 MGI:MGI:5807028 NCBI chr 8:313,325...325,089
Ensembl chr 8:313,327...325,095
JBrowse link
G DNM1 dynamin 1 ISO RGD PMID:16648848 RGD:13504740 NCBI chr 1:268,653,045...268,702,233
Ensembl chr 1:268,653,039...268,702,223
JBrowse link
G LRRK2 leucine rich repeat kinase 2 ISO (MGI:MGI:6189511|PMID:25501810) SynGO PMID:25501810 MGI:MGI:6189511 NCBI chr 5:71,800,337...71,945,828
Ensembl chr 5:71,800,240...71,944,938
JBrowse link
G PICALM phosphatidylinositol binding clathrin assembly protein ISO RGD PMID:18842885 RGD:8554167 NCBI chr 9:19,835,934...19,947,239
Ensembl chr 9:19,835,938...20,104,632
JBrowse link
G PIP5K1C phosphatidylinositol-4-phosphate 5-kinase type 1 gamma ISO (MGI:MGI:3054280|PMID:15386003) MGI PMID:15386003 MGI:MGI:3054280 NCBI chr 2:74,977,266...75,046,898
Ensembl chr 2:74,977,274...75,046,896
JBrowse link
G PPP3CB protein phosphatase 3 catalytic subunit beta IEA Ensembl GO_REF:0000107 NCBI chr14:76,239,497...76,305,345
Ensembl chr14:76,248,849...76,305,328
JBrowse link
G PPP3CC protein phosphatase 3 catalytic subunit gamma ISO PMID:26627835 SynGO PMID:26627835 RGD:11532172 NCBI chr14:6,711,789...6,799,318
Ensembl chr14:6,639,206...6,803,670
JBrowse link
G ROCK1 Rho associated coiled-coil containing protein kinase 1 IEA Ensembl GO_REF:0000107 NCBI chr 6:106,163,899...106,314,998
Ensembl chr 6:106,163,903...106,314,944
JBrowse link
G SCAMP5 secretory carrier membrane protein 5 ISO PMID:25057210 SynGO PMID:25057210 RGD:13702419 NCBI chr 7:58,550,190...58,577,894
Ensembl chr 7:58,550,197...58,608,056
JBrowse link
G SH3GL1 SH3 domain containing GRB2 like 1, endophilin A2 ISO RGD PMID:22750032 RGD:13463484 NCBI chr 2:74,414,453...74,445,450
Ensembl chr 2:74,414,465...74,449,433
JBrowse link
G SLC17A7 solute carrier family 17 member 7 ISO RGD PMID:16815333 RGD:13504741 NCBI chr 6:54,511,121...54,521,616
Ensembl chr 6:54,511,121...54,521,611
JBrowse link
G SNAP91 synaptosome associated protein 91 ISO RGD PMID:18842885 RGD:8554167 NCBI chr 1:82,540,998...82,698,652
Ensembl chr 1:82,540,985...82,697,342
JBrowse link
G SYT7 synaptotagmin 7 ISO (MGI:MGI:6189675|PMID:14532108) SynGO PMID:14532108 MGI:MGI:6189675 NCBI chr 2:9,947,962...10,012,713
Ensembl chr 2:9,947,925...10,012,521
JBrowse link
G VAMP4 vesicle associated membrane protein 4 ISO PMID:26607000 SynGO PMID:26607000 RGD:11058152 NCBI chr 9:114,138,350...114,174,996
Ensembl chr 9:114,138,330...114,175,364
JBrowse link
regulation of synaptic vesicle exocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADCY1 adenylate cyclase 1 IEA Ensembl GO_REF:0000107 NCBI chr18:50,043,572...50,143,549
Ensembl chr18:50,046,575...50,143,771
JBrowse link
G ADORA2A adenosine A2a receptor ISO PMID:15659214 SynGO PMID:15659214 RGD:1625642 NCBI chr14:49,467,186...49,485,845
Ensembl chr14:49,468,862...49,485,841
JBrowse link
G ADORA2B adenosine A2b receptor ISO (MGI:MGI:6108216|PMID:25704806) SynGO PMID:25704806 MGI:MGI:6108216 NCBI chr12:59,431,834...59,449,701
Ensembl chr12:59,393,220...59,449,692
JBrowse link
G ADRA1A adrenoceptor alpha 1A ISO PMID:12548707 SynGO PMID:12548707 RGD:13702265 NCBI chr14:10,623,391...10,733,378
Ensembl chr14:10,626,293...10,733,069
JBrowse link
G ADRA2A adrenoceptor alpha 2A IEA Ensembl GO_REF:0000107 NCBI chr14:121,469,572...121,470,924
Ensembl chr14:121,469,527...121,470,924
JBrowse link
G ADRB2 adrenoceptor beta 2 ISO PMID:17175110 SynGO PMID:17175110 RGD:5129150 NCBI chr 2:150,032,649...150,035,591
Ensembl chr 2:150,032,782...150,035,591
JBrowse link
G APBA1 amyloid beta precursor protein binding family A member 1 IEA Ensembl GO_REF:0000107 NCBI chr 1:222,758,508...222,990,000
Ensembl chr 1:222,758,508...222,990,335
JBrowse link
G APBA2 amyloid beta precursor protein binding family A member 2 ISO (MGI:MGI:3691953|PMID:17167098) SynGO PMID:17167098 MGI:MGI:3691953 NCBI chr 1:144,183,148...144,315,154
Ensembl chr 1:144,071,859...144,315,154
JBrowse link
G BACE1 beta-secretase 1 IEA Ensembl GO_REF:0000107 NCBI chr 9:44,640,389...44,665,863
Ensembl chr 9:44,640,392...44,665,835
JBrowse link
G CACNB4 calcium voltage-gated channel auxiliary subunit beta 4 IEA Ensembl GO_REF:0000107 NCBI chr15:402,801...455,691
Ensembl chr15:186,315...459,856
JBrowse link
G CALM1 calmodulin 1 ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr 7:112,160,823...112,171,754
Ensembl chr 7:112,154,880...112,171,744
JBrowse link
G CALM2 calmodulin 2 ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr 3:93,371,765...93,386,378
Ensembl chr 3:93,372,045...93,438,068
JBrowse link
G CALM3 calmodulin 3 ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr 6:52,506,979...52,516,704
Ensembl chr 6:52,506,674...52,516,703
JBrowse link
G CASK calcium/calmodulin dependent serine protein kinase IEA Ensembl GO_REF:0000107 NCBI chr  X:37,166,973...37,535,723
Ensembl chr  X:37,167,577...37,536,160
JBrowse link
G CHRM2 cholinergic receptor muscarinic 2 ISO (MGI:MGI:2176006|PMID:11880500) SynGO PMID:11880500 MGI:MGI:2176006 NCBI chr18:12,455,139...12,600,314
Ensembl chr18:12,455,150...12,600,249
JBrowse link
G CHRNA3 cholinergic receptor nicotinic alpha 3 subunit ISO PMID:12065717 SynGO PMID:12065717 RGD:13702272 NCBI chr 7:47,361,710...47,382,743
Ensembl chr 7:47,361,778...47,384,303
JBrowse link
G CHRNA4 cholinergic receptor nicotinic alpha 4 subunit ISO (MGI:MGI:2673776|PMID:12944511) SynGO PMID:12944511 MGI:MGI:2673776 NCBI chr17:62,424,672...62,436,646
Ensembl chr17:62,420,546...62,436,165
JBrowse link
G CHRNA5 cholinergic receptor nicotinic alpha 5 subunit IEA Ensembl GO_REF:0000107 NCBI chr 7:47,382,860...47,425,871
Ensembl chr 7:47,382,764...47,425,950
JBrowse link
G CHRNA6 cholinergic receptor nicotinic alpha 6 subunit ISO (MGI:MGI:2673776|PMID:12944511) SynGO PMID:12944511 MGI:MGI:2673776 NCBI chr17:11,725,880...11,739,949
Ensembl chr17:11,725,375...11,739,747
JBrowse link
G CHRNA7 cholinergic receptor nicotinic alpha 7 subunit ISO PMID:21762741 SynGO PMID:21762741 RGD:13702307 NCBI chr 1:142,803,697...142,937,124
Ensembl chr 1:142,803,698...142,937,788
JBrowse link
G CHRNB2 cholinergic receptor nicotinic beta 2 subunit IEA Ensembl GO_REF:0000107 NCBI chr 4:95,196,992...95,211,084
Ensembl chr 4:95,198,717...95,211,037
JBrowse link
G CHRNB3 cholinergic receptor nicotinic beta 3 subunit ISO (MGI:MGI:3028759|PMID:14657161) SynGO PMID:14657161 MGI:MGI:3028759 NCBI chr17:11,687,646...11,714,357
Ensembl chr17:11,687,557...11,722,183
JBrowse link
G CSPG5 chondroitin sulfate proteoglycan 5 IEA Ensembl GO_REF:0000107 NCBI chr13:30,387,225...30,404,181
Ensembl chr13:30,385,505...30,411,880
JBrowse link
G CYTH1 cytohesin 1 ISO PMID:9927699 SynGO PMID:9927699 RGD:13702340 NCBI chr12:3,356,265...3,432,644
Ensembl chr12:3,355,954...3,432,644
JBrowse link
G DGKI diacylglycerol kinase iota IEA Ensembl GO_REF:0000107 NCBI chr18:11,705,055...12,187,098
Ensembl chr18:11,705,113...12,178,947
JBrowse link
G DRD1 dopamine receptor D1 IEA Ensembl GO_REF:0000107 NCBI chr16:49,189,555...49,193,722
Ensembl chr16:49,188,936...49,193,709
JBrowse link
G DRD2 dopamine receptor D2 IEA Ensembl GO_REF:0000107 NCBI chr 9:41,068,618...41,135,262
Ensembl chr 9:41,068,779...41,133,599
JBrowse link
G DRD4 dopamine receptor D4 ISO PMID:24155292 SynGO PMID:24155292 RGD:13702381 NCBI chr 2:398,766...401,539
Ensembl chr 2:398,766...401,432
JBrowse link
G DTNBP1 dystrobrevin binding protein 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:11,602,470...11,720,156
Ensembl chr 7:11,600,792...11,748,548
JBrowse link
G DVL1 dishevelled segment polarity protein 1 ISO (MGI:MGI:5699934|PMID:26400647) SynGO PMID:26400647 MGI:MGI:5699934 NCBI chr 6:63,617,787...63,628,965
Ensembl chr 6:63,617,789...63,629,229
JBrowse link
G FBXL20 F-box and leucine rich repeat protein 20 IEA Ensembl GO_REF:0000107 NCBI chr12:22,873,395...22,972,677
Ensembl chr12:22,874,160...22,970,412
JBrowse link
G GIPC1 GIPC PDZ domain containing family member 1 IEA Ensembl GO_REF:0000107 NCBI chr 2:64,780,447...64,794,922
Ensembl chr 2:64,780,442...64,798,783
JBrowse link
G GIT1 GIT ArfGAP 1 ISO (MGI:MGI:5708768|PMID:26637799) SynGO PMID:26637799 MGI:MGI:5708768 NCBI chr12:45,768,172...45,783,652
Ensembl chr12:45,768,174...45,783,747
JBrowse link
G GIT2 GIT ArfGAP 2 ISO (MGI:MGI:5708768|PMID:26637799) SynGO PMID:26637799 MGI:MGI:5708768 NCBI chr14:40,995,986...41,051,896
Ensembl chr14:40,995,727...41,051,895
JBrowse link
G GLRA3 glycine receptor alpha 3 ISO (MGI:MGI:5770489|PMID:26851771) SynGO PMID:26851771 MGI:MGI:5770489 NCBI chr14:15,120,091...15,603,509
Ensembl chr14:15,303,538...15,595,028
JBrowse link
G GRIN3A glutamate ionotropic receptor NMDA type subunit 3A IEA Ensembl GO_REF:0000107 NCBI chr 1:243,263,202...243,416,739
Ensembl chr 1:243,259,493...243,415,590
JBrowse link
G GRM4 glutamate metabotropic receptor 4 ISO (MGI:MGI:83238|PMID:8815915) MGI PMID:8815915 MGI:MGI:83238 NCBI chr 7:30,179,723...30,278,579
Ensembl chr 7:30,179,305...30,279,121
JBrowse link
G GRM7 glutamate metabotropic receptor 7 ISO (MGI:MGI:3690146|PMID:12065412) SynGO PMID:12065412 MGI:MGI:3690146 NCBI chr13:63,318,002...64,203,982
Ensembl chr13:63,318,096...64,203,300
JBrowse link
G GRM8 glutamate metabotropic receptor 8 ISO PMID:15275822 SynGO PMID:15275822 RGD:6484726 NCBI chr18:20,945,049...21,756,952
Ensembl chr18:20,950,532...21,758,170
JBrowse link
G GSK3B glycogen synthase kinase 3 beta IEA Ensembl GO_REF:0000107 NCBI chr13:140,136,109...140,370,197
Ensembl chr13:140,136,158...140,369,574
JBrowse link
G HTR1A 5-hydroxytryptamine receptor 1A ISO PMID:10381597 SynGO PMID:10381597 RGD:13702211 NCBI chr16:42,479,812...42,484,365 JBrowse link
G HTR1B 5-hydroxytryptamine receptor 1B ISO PMID:17067296 SynGO PMID:17067296 RGD:13702319 NCBI chr 1:88,597,510...88,598,682
Ensembl chr 1:88,596,215...88,601,047
JBrowse link
G HTR2A 5-hydroxytryptamine receptor 2A ISO PMID:12196574 SynGO PMID:12196574 RGD:13702246 NCBI chr11:20,555,939...20,620,225
Ensembl chr11:20,555,961...20,619,629
JBrowse link
G HTR7 5-hydroxytryptamine receptor 7 ISO PMID:26779891 SynGO PMID:26779891 RGD:13702205 NCBI chr14:102,443,312...102,548,894
Ensembl chr14:102,444,566...102,548,931
JBrowse link
G KCNH1 potassium voltage-gated channel subfamily H member 1 ISO (MGI:MGI:5917278|PMID:25556795) SynGO PMID:25556795 MGI:MGI:5917278 NCBI chr 9:131,960,566...132,336,029 JBrowse link
G LRRK2 leucine rich repeat kinase 2 IEA Ensembl GO_REF:0000107 NCBI chr 5:71,800,337...71,945,828
Ensembl chr 5:71,800,240...71,944,938
JBrowse link
G MYO6 myosin VI ISO (MGI:MGI:3654775|PMID:16819522) SynGO PMID:16819522 MGI:MGI:3654775 NCBI chr 1:89,992,860...90,137,767
Ensembl chr 1:89,992,866...90,137,734
JBrowse link
G NCS1 neuronal calcium sensor 1 ISO PMID:12947410 SynGO PMID:12947410 RGD:13702435 NCBI chr 1:270,274,504...270,334,908
Ensembl chr 1:270,274,499...270,334,907
JBrowse link
G NR3C2 nuclear receptor subfamily 3 group C member 2 ISO (MGI:MGI:3798112|PMID:18547242) SynGO PMID:18547242 MGI:MGI:3798112 NCBI chr 8:80,303,172...80,669,050
Ensembl chr 8:80,290,715...80,669,404
JBrowse link
G NRN1 neuritin 1 ISO (MGI:MGI:5908484|PMID:28475719) SynGO PMID:28475719 MGI:MGI:5908484 NCBI chr 7:3,682,568...3,691,328
Ensembl chr 7:3,682,567...3,691,421
JBrowse link
G NRXN3 neurexin 3 IEA Ensembl GO_REF:0000107 NCBI chr 7:101,132,780...102,779,809
Ensembl chr 7:101,132,830...102,777,822
JBrowse link
G P2RX1 purinergic receptor P2X 1 ISO PMID:16000618 SynGO PMID:16000618 RGD:1581702 NCBI chr12:49,956,329...49,974,789
Ensembl chr12:49,956,323...49,974,671
JBrowse link
G P2RX2 purinergic receptor P2X 2 ISO PMID:16000618 SynGO PMID:16000618 RGD:1581702 NCBI chr14:22,854,828...22,858,574
Ensembl chr14:22,854,828...22,858,386
JBrowse link
G P2RY1 purinergic receptor P2Y1 ISO PMID:16000618 SynGO PMID:16000618 RGD:1581702 NCBI chr13:92,991,150...92,997,702
Ensembl chr13:92,991,043...92,997,700
JBrowse link
G P2RY2 purinergic receptor P2Y2 ISO PMID:16000618 SynGO PMID:16000618 RGD:1581702 NCBI chr 9:7,672,294...7,695,085
Ensembl chr 9:7,672,401...7,695,163
JBrowse link
G P2RY4 pyrimidinergic receptor P2Y4 ISO PMID:16000618 SynGO PMID:16000618 RGD:1581702 NCBI chr  X:56,284,736...56,285,833
Ensembl chr  X:56,279,346...56,286,400
JBrowse link
G PFN2 profilin 2 IEA Ensembl GO_REF:0000107 NCBI chr13:90,177,534...90,185,978
Ensembl chr13:90,177,540...90,183,742
JBrowse link
G PPFIA2 PTPRF interacting protein alpha 2 ISO PMID:23751498 SynGO PMID:23751498 RGD:13702233 NCBI chr 5:99,818,591...100,279,029
Ensembl chr 5:99,819,405...100,279,028
JBrowse link
G PREPL prolyl endopeptidase like IEA Ensembl GO_REF:0000107 NCBI chr 3:96,092,314...96,159,533
Ensembl chr 3:96,092,334...96,159,531
JBrowse link
G PRKCA protein kinase C alpha ISO (MGI:MGI:5141567|PMID:21658591) SynGO PMID:21658591 MGI:MGI:5141567 NCBI chr12:12,882,287...13,268,647
Ensembl chr12:12,882,064...13,263,554
JBrowse link
G PRKCB protein kinase C beta IEA Ensembl GO_REF:0000107 NCBI chr 3:21,995,227...22,383,628
Ensembl chr 3:21,995,231...22,383,264
JBrowse link
G PRKCE protein kinase C epsilon ISO PMID:26625935 SynGO PMID:26625935 RGD:11353024 NCBI chr 3:94,351,277...94,864,549
Ensembl chr 3:94,349,889...94,909,020
JBrowse link
G PRKCG protein kinase C gamma IEA Ensembl GO_REF:0000107 NCBI chr 6:56,213,479...56,235,683
Ensembl chr 6:56,213,483...56,234,656
JBrowse link
G RAB3A RAB3A, member RAS oncogene family ISO PMID:28057568 UniProt PMID:28057568 RGD:14390053 NCBI chr 2:59,603,090...59,609,773
Ensembl chr 2:59,603,117...59,609,767
JBrowse link
G RAB5A RAB5A, member RAS oncogene family IEA Ensembl GO_REF:0000107 NCBI chr13:6,905,302...6,940,165
Ensembl chr13:6,905,348...6,941,553
JBrowse link
G RIMS1 regulating synaptic membrane exocytosis 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:51,785,140...52,246,456
Ensembl chr 1:51,785,495...52,244,934
JBrowse link
G RIMS2 regulating synaptic membrane exocytosis 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:32,999,615...33,613,413
Ensembl chr 4:32,999,613...33,613,469
JBrowse link
G RIMS3 regulating synaptic membrane exocytosis 3 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:170,506,392...170,546,939
Ensembl chr 6:170,506,426...170,546,939
JBrowse link
G RIMS4 regulating synaptic membrane exocytosis 4 ISO PMID:20452978 MGI PMID:20452978 RGD:8554325 NCBI chr17:47,167,302...47,235,237
Ensembl chr17:47,167,305...47,235,476
JBrowse link
G SNAPIN SNAP associated protein IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:95,987,524...95,989,527
Ensembl chr 4:95,984,358...95,989,474
JBrowse link
G STXBP5 syntaxin binding protein 5 ISO (MGI:MGI:3814264|PMID:18936251) SynGO PMID:18936251 MGI:MGI:3814264 NCBI chr 1:18,343,826...18,512,750
Ensembl chr 1:18,345,363...18,513,252
JBrowse link
G STXBP5L syntaxin binding protein 5 like IEA Ensembl GO_REF:0000107 NCBI chr13:139,116,931...139,491,227
Ensembl chr13:139,116,923...139,539,881
JBrowse link
G SYP synaptophysin ISO (MGI:MGI:1349221|PMID:10595519) SynGO PMID:10595519 MGI:MGI:1349221 NCBI chr  X:43,232,190...43,246,764
Ensembl chr  X:43,232,195...43,246,682
JBrowse link
G SYT1 synaptotagmin 1 ISO PMID:28057568 UniProt PMID:28057568 RGD:14390053 NCBI chr 5:101,871,313...102,394,310
Ensembl chr 5:101,871,312...102,020,847
JBrowse link
G VPS18 VPS18 core subunit of CORVET and HOPS complexes IEA Ensembl GO_REF:0000107 NCBI chr 1:130,409,121...130,420,467
Ensembl chr 1:130,409,122...130,420,450
JBrowse link
G WNT7A Wnt family member 7A IEA Ensembl GO_REF:0000107 NCBI chr13:70,538,802...70,602,464
Ensembl chr13:70,538,894...70,602,455
JBrowse link
regulation of synaptic vesicle fusion to presynaptic active zone membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CPLX1 complexin 1 ISO (MGI:MGI:2679622|PMID:11163241) SynGO PMID:11163241 MGI:MGI:2679622 NCBI chr 8:197,876...231,721
Ensembl chr 8:197,881...232,038
JBrowse link
G CPLX2 complexin 2 IEA Ensembl GO_REF:0000107 NCBI chr 2:81,732,527...81,813,189
Ensembl chr 2:81,732,528...81,813,271
JBrowse link
G CPLX3 complexin 3 IEA Ensembl GO_REF:0000107 NCBI chr 7:58,712,743...58,717,028
Ensembl chr 7:58,712,744...58,716,997
JBrowse link
G GRIK5 glutamate ionotropic receptor kainate type subunit 5 IEA Ensembl GO_REF:0000107 NCBI chr 6:49,840,671...49,901,656
Ensembl chr 6:49,844,879...49,901,186
JBrowse link
G RAB3A RAB3A, member RAS oncogene family IEA Ensembl GO_REF:0000107 NCBI chr 2:59,603,090...59,609,773
Ensembl chr 2:59,603,117...59,609,767
JBrowse link
G VAMP1 vesicle associated membrane protein 1 ISO (MGI:MGI:5427815|PMID:21282288) SynGO PMID:21282288 MGI:MGI:5427815 NCBI chr 5:64,181,496...64,188,275 JBrowse link
regulation of synaptic vesicle priming term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NAPA NSF attachment protein alpha IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr 6:53,249,330...53,275,304
Ensembl chr 6:53,238,678...53,275,230
JBrowse link
G NAPB NSF attachment protein beta IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr17:30,361,439...30,396,105
Ensembl chr17:30,359,420...30,396,078
JBrowse link
G RAB3A RAB3A, member RAS oncogene family ISO PMID:21689256 UniProt PMID:21689256 RGD:14390056 NCBI chr 2:59,603,090...59,609,773
Ensembl chr 2:59,603,117...59,609,767
JBrowse link
G STX1A syntaxin 1A IEA Ensembl GO_REF:0000107 NCBI chr 3:10,974,127...10,991,846
Ensembl chr 3:10,974,126...10,991,874
JBrowse link
G STX1B syntaxin 1B IEA Ensembl GO_REF:0000107 NCBI chr 3:17,439,563...17,459,517
Ensembl chr 3:17,439,581...17,459,516
JBrowse link
G STXBP1 syntaxin binding protein 1 ISO PMID:21689256 UniProt
RGD
PMID:19255244, PMID:21689256 RGD:14390056, RGD:2311128 NCBI chr 1:268,116,124...268,205,805
Ensembl chr 1:268,116,118...268,213,921
JBrowse link
G STXBP5 syntaxin binding protein 5 ISO (MGI:MGI:3814264|PMID:18936251) SynGO PMID:18936251 MGI:MGI:3814264 NCBI chr 1:18,343,826...18,512,750
Ensembl chr 1:18,345,363...18,513,252
JBrowse link
G UNC13A unc-13 homolog A ISO PMID:21689256 UniProt PMID:21689256 RGD:14390056 NCBI chr 2:60,057,926...60,130,015 JBrowse link
regulation of synaptic vesicle recycling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FGF14 fibroblast growth factor 14 ISO PMID:23831029 MGI PMID:23831029 RGD:10047342 NCBI chr11:70,251,374...70,861,941
Ensembl chr11:70,251,375...70,861,064
JBrowse link
G VAMP2 vesicle associated membrane protein 2 ISO RGD PMID:21808019 RGD:13506237 NCBI chr12:53,378,407...53,382,243 JBrowse link
spontaneous exocytosis of neurotransmitter term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PRKACA protein kinase cAMP-activated catalytic subunit alpha ISO PMID:17190793 UniProt PMID:17190793 RGD:10047304 NCBI chr 2:65,074,876...65,095,564
Ensembl chr 2:65,074,870...65,095,553
JBrowse link
G SYT12 synaptotagmin 12 ISO PMID:17190793 GO_Central PMID:17190793 RGD:10047304 NCBI chr 2:5,410,605...5,434,492
Ensembl chr 2:5,410,624...5,433,929
JBrowse link
synaptic vesicle budding from endosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AP1S2 adaptor related protein complex 1 subunit sigma 2 ISO (MGI:MGI:5617942|PMID:20203623) SynGO PMID:20203623 MGI:MGI:5617942 NCBI chr  X:12,367,785...12,397,672
Ensembl chr  X:12,367,156...12,398,496
JBrowse link
G AP3B1 adaptor related protein complex 3 subunit beta 1 ISO (MGI:MGI:6189637|PMID:11588176) SynGO PMID:11588176 MGI:MGI:6189637 NCBI chr 2:86,875,922...87,142,722
Ensembl chr 2:86,873,081...87,142,744
JBrowse link
G AP3D1 adaptor related protein complex 3 subunit delta 1 IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr 2:76,428,443...76,471,266
Ensembl chr 2:76,428,436...76,471,258
JBrowse link
G KIAA1107 KIAA1107 ortholog ISO (MGI:MGI:6104538|PMID:29262337) MGI PMID:29262337 MGI:MGI:6104538 NCBI chr 4:124,859,271...124,950,420
Ensembl chr 4:124,858,099...124,950,427
JBrowse link
synaptic vesicle budding from presynaptic endocytic zone membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DNM1 dynamin 1 IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr 1:268,653,045...268,702,233
Ensembl chr 1:268,653,039...268,702,223
JBrowse link
G DNM2 dynamin 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:69,474,011...69,574,427
Ensembl chr 2:69,474,031...69,574,424
JBrowse link
G DNM3 dynamin 3 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:114,262,782...114,805,252
Ensembl chr 9:114,262,782...114,805,242
JBrowse link
G MX1 MX dynamin like GTPase 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr13:204,843,049...204,868,927
Ensembl chr13:204,843,754...204,868,922
JBrowse link
G MX2 myxovirus (influenza virus) resistance 2 (mouse) IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr13:204,798,633...204,821,612
Ensembl chr13:204,798,630...204,831,957
JBrowse link
G PICALM phosphatidylinositol binding clathrin assembly protein IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:19,835,934...19,947,239
Ensembl chr 9:19,835,938...20,104,632
JBrowse link
G SNAP91 synaptosome associated protein 91 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:82,540,998...82,698,652
Ensembl chr 1:82,540,985...82,697,342
JBrowse link
synaptic vesicle clustering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTNNB1 catenin beta 1 IEA Ensembl GO_REF:0000107 NCBI chr13:25,163,550...25,208,314
Ensembl chr13:25,137,173...25,208,311
JBrowse link
G NLGN1 neuroligin 1 IEA Ensembl GO_REF:0000107 NCBI chr13:111,851,007...112,727,202
Ensembl chr13:112,036,053...112,725,618
JBrowse link
G NRXN1 neurexin 1 ISO (MGI:MGI:2665153|PMID:12796785) BHF-UCL PMID:12796785 MGI:MGI:2665153 NCBI chr 3:89,799,426...90,914,205
Ensembl chr 3:89,799,543...90,914,205
JBrowse link
G PCLO piccolo presynaptic cytomatrix protein ISO (MGI:MGI:4442284|PMID:20332206) SynGO PMID:20332206 MGI:MGI:4442284 NCBI chr 9:97,114,503...97,513,081
Ensembl chr 9:97,114,511...97,513,072
JBrowse link
G RAB3A RAB3A, member RAS oncogene family IEA Ensembl GO_REF:0000107 NCBI chr 2:59,603,090...59,609,773
Ensembl chr 2:59,603,117...59,609,767
JBrowse link
G SYN1 synapsin I IEA Ensembl GO_REF:0000107 NCBI chr  X:42,090,245...42,142,254
Ensembl chr  X:42,090,245...42,142,224
JBrowse link
G SYN2 synapsin II IEA Ensembl GO_REF:0000107 NCBI chr13:68,050,015...68,221,504
Ensembl chr13:68,050,186...68,221,496
JBrowse link
G SYN3 synapsin III ISO (MGI:MGI:2180939|PMID:12040043) SynGO PMID:12040043 MGI:MGI:2180939 NCBI chr 5:12,017,741...12,501,995
Ensembl chr 5:12,017,784...12,578,953
JBrowse link
G SYNDIG1 synapse differentiation inducing 1 ISO PMID:20152115 UniProt PMID:20152115 RGD:8554654 NCBI chr17:30,621,622...30,709,387
Ensembl chr17:30,638,039...30,709,382
JBrowse link
synaptic vesicle docking term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTBP2 C-terminal binding protein 2 IEA Ensembl GO_REF:0000107 NCBI chr14:134,329,312...134,488,805
Ensembl chr14:134,329,941...134,487,755
JBrowse link
G PPFIA3 PTPRF interacting protein alpha 3 ISO (MGI:MGI:6120581|PMID:29439199) SynGO PMID:29439199 MGI:MGI:6120581 NCBI chr 6:54,313,981...54,337,345
Ensembl chr 6:54,313,981...54,337,345
JBrowse link
G RIMS1 regulating synaptic membrane exocytosis 1 ISO (MGI:MGI:4939085|PMID:21241895) SynGO PMID:21241895 MGI:MGI:4939085 NCBI chr 1:51,785,140...52,246,456
Ensembl chr 1:51,785,495...52,244,934
JBrowse link
G RIMS2 regulating synaptic membrane exocytosis 2 ISO (MGI:MGI:4939085|PMID:21241895) MGI PMID:21241895 MGI:MGI:4939085 NCBI chr 4:32,999,615...33,613,413
Ensembl chr 4:32,999,613...33,613,469
JBrowse link
G STX1A syntaxin 1A ISO (MGI:MGI:5603022|PMID:24587181)
(MGI:MGI:5521403|PMID:24133272)
ParkinsonsUK-UCL PMID:24133272, PMID:24587181 MGI:MGI:5521403, MGI:MGI:5603022 NCBI chr 3:10,974,127...10,991,846
Ensembl chr 3:10,974,126...10,991,874
JBrowse link
G STX1B syntaxin 1B IEA Ensembl GO_REF:0000107 NCBI chr 3:17,439,563...17,459,517
Ensembl chr 3:17,439,581...17,459,516
JBrowse link
G STX3 syntaxin 3 IEA InterPro GO_REF:0000002 NCBI chr 2:11,694,788...11,739,858
Ensembl chr 2:11,694,859...11,740,744
JBrowse link
G STX4 syntaxin 4 ISO RGD PMID:7690687 RGD:68313 NCBI chr 3:17,422,266...17,431,377
Ensembl chr 3:17,416,842...17,431,053
JBrowse link
G SYDE1 synapse defective Rho GTPase homolog 1 ISO (MGI:MGI:5515279|PMID:23791195) MGI PMID:23791195 MGI:MGI:5515279 NCBI chr 2:62,447,030...62,453,944
Ensembl chr 2:62,447,036...62,453,949
JBrowse link
G UNC13A unc-13 homolog A ISO (MGI:MGI:4354715|PMID:19558619) MGI PMID:19558619 MGI:MGI:4354715 NCBI chr 2:60,057,926...60,130,015 JBrowse link
G UNC13B unc-13 homolog B IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:235,918,751...236,158,098 JBrowse link
G VAMP2 vesicle associated membrane protein 2 ISO (MGI:MGI:5617001|PMID:25374362) SynGO PMID:25374362 MGI:MGI:5617001 NCBI chr12:53,378,407...53,382,243 JBrowse link
synaptic vesicle endocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTB actin beta ISO (MGI:MGI:6189485|PMID:27840001) SynGO PMID:27840001 MGI:MGI:6189485 NCBI chr 3:4,084,275...4,090,383
Ensembl chr 3:4,082,216...4,090,356
JBrowse link
G ACTG1 actin gamma 1 ISO (MGI:MGI:6189485|PMID:27840001) SynGO PMID:27840001 MGI:MGI:6189485 NCBI chr12:1,320,355...1,323,219
Ensembl chr12:1,160,350...1,323,217
JBrowse link
G AMPH amphiphysin IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:108,800,718...108,971,575
Ensembl chr 9:108,799,793...108,971,668
JBrowse link
G AP2B1 adaptor related protein complex 2 subunit beta 1 ISO (PMID:11102472) SynGO PMID:11102472 NCBI chr12:39,803,105...39,940,801
Ensembl chr12:39,787,533...39,940,780
JBrowse link
G AP2M1 adaptor related protein complex 2 subunit mu 1 ISO PMID:19321783 SynGO PMID:19321783 RGD:12050109 NCBI chr13:122,094,375...122,103,408
Ensembl chr13:122,089,938...122,104,805
JBrowse link
G ARF6 ADP ribosylation factor 6 ISO PMID:26731518 SynGO PMID:26731518 RGD:11556875 NCBI chr 1:179,697,582...179,717,299
Ensembl chr 1:179,697,615...179,717,844
JBrowse link
G BIN1 bridging integrator 1 ISO PMID:9348539 SynGO PMID:9348539 RGD:631926 NCBI chr15:25,328,679...25,379,675
Ensembl chr15:25,328,674...25,383,652
JBrowse link
G CANX calnexin IEA Ensembl GO_REF:0000107 NCBI chr 2:78,879,031...78,915,828
Ensembl chr 2:78,879,031...78,915,816
JBrowse link
G CDK5 cyclin dependent kinase 5 ISO RGD PMID:12855954 RGD:1358501 NCBI chr18:6,166,914...6,171,157 JBrowse link
G CEL carboxyl ester lipase IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:272,763,203...272,770,259
Ensembl chr 1:272,763,226...272,770,255
JBrowse link
G CLTC clathrin heavy chain ISO PMID:16982422 SynGO PMID:16982422 RGD:13702168 NCBI chr12:35,848,894...35,926,028
Ensembl chr12:35,849,136...35,926,023
JBrowse link
G DENND1A DENN domain containing 1A IEA Ensembl GO_REF:0000107 NCBI chr 1:264,300,989...264,823,351
Ensembl chr 1:264,300,343...264,824,193
JBrowse link
G DNM1 dynamin 1 ISO (MGI:MGI:3709249|PMID:17463283) SynGO PMID:17463283 MGI:MGI:3709249 NCBI chr 1:268,653,045...268,702,233
Ensembl chr 1:268,653,039...268,702,223
JBrowse link
G DNM1L dynamin 1 like ISO PMID:23792689 SynGO PMID:23792689 RGD:12793033 NCBI chr 5:41,571,054...41,636,058 JBrowse link
G DNM2 dynamin 2 ISO (MGI:MGI:5285027|PMID:21689597) SynGO PMID:21689597 MGI:MGI:5285027 NCBI chr 2:69,474,011...69,574,427
Ensembl chr 2:69,474,031...69,574,424
JBrowse link
G DNM3 dynamin 3 ISO (MGI:MGI:5285027|PMID:21689597) SynGO PMID:21689597 MGI:MGI:5285027 NCBI chr 9:114,262,782...114,805,252
Ensembl chr 9:114,262,782...114,805,242
JBrowse link
G FCHO2 FCH and mu domain containing endocytic adaptor 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:82,101,283...82,248,410
Ensembl chr 2:82,101,283...82,248,825
JBrowse link
G GRN granulin precursor ISO RGD PMID:21813674 RGD:5509044 NCBI chr12:18,893,772...18,900,444
Ensembl chr12:18,893,770...18,900,446
JBrowse link
G ITSN1 intersectin 1 ISO (MGI:MGI:3811659|PMID:18676989) MGI PMID:18676989 MGI:MGI:3811659 NCBI chr13:197,301,515...197,492,537
Ensembl chr13:197,249,061...197,491,830
JBrowse link
G KIAA1107 KIAA1107 ortholog ISO (MGI:MGI:6104538|PMID:29262337) MGI PMID:29262337 MGI:MGI:6104538 NCBI chr 4:124,859,271...124,950,420
Ensembl chr 4:124,858,099...124,950,427
JBrowse link
G KIAA1109 KIAA1109 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 8:101,737,084...101,937,212
Ensembl chr 8:101,737,086...101,937,156
JBrowse link
G LOC100519934 uncharacterized LOC100519934 ISO (MGI:MGI:3625625|PMID:16606832) MGI PMID:16606832 MGI:MGI:3625625 NCBI chr 1:73,119,758...73,124,368 JBrowse link
G LOC100624109 neuroligin-4, X-linked IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:2,701,397...3,103,824
NCBI chr  Y:1,645,491...1,946,441
JBrowse link
G NLGN1 neuroligin 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr13:111,851,007...112,727,202
Ensembl chr13:112,036,053...112,725,618
JBrowse link
G NLGN3 neuroligin 3 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:57,174,506...57,204,770
Ensembl chr  X:57,176,103...57,201,486
JBrowse link
G OPHN1 oligophrenin 1 IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr  X:54,056,504...54,617,045
Ensembl chr  X:53,884,012...54,616,960
JBrowse link
G PACSIN1 protein kinase C and casein kinase substrate in neurons 1 IEA Ensembl GO_REF:0000107 NCBI chr 7:30,459,851...30,512,736
Ensembl chr 7:30,492,587...30,512,741
JBrowse link
G PICALM phosphatidylinositol binding clathrin assembly protein IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:19,835,934...19,947,239
Ensembl chr 9:19,835,938...20,104,632
JBrowse link
G RAB27B RAB27B, member RAS oncogene family ISO PMID:20926670 SynGO PMID:20926670 RGD:13432355 NCBI chr 1:104,241,500...104,418,721
Ensembl chr 1:104,241,571...104,417,105
JBrowse link
G SCRIB scribble planar cell polarity protein ISO (MGI:MGI:4365512|PMID:19458197) SynGO PMID:19458197 MGI:MGI:4365512 NCBI chr 4:824,925...852,360 JBrowse link
G SH3GL2 SH3 domain containing GRB2 like 2, endophilin A1 ISO PMID:22099461
(MGI:MGI:4359148|PMID:19481455)
SynGO
MGI
PMID:19481455, PMID:22099461 MGI:MGI:4359148, RGD:13702445 NCBI chr 1:205,081,227...205,285,359
Ensembl chr 1:205,081,227...205,285,343
JBrowse link
G SNAP91 synaptosome associated protein 91 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:82,540,998...82,698,652
Ensembl chr 1:82,540,985...82,697,342
JBrowse link
G SNCA synuclein alpha IEA
IBA
(PMID:21873635) Ensembl
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr 8:129,247,724...129,388,307
Ensembl chr 8:129,248,819...129,388,307
JBrowse link
G SNCB synuclein beta IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:81,287,764...81,302,859
Ensembl chr 2:81,287,878...81,302,863
JBrowse link
G STON2 stonin 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:104,034,913...104,189,735
Ensembl chr 7:104,032,725...104,189,687
JBrowse link
G STX1A syntaxin 1A IEA Ensembl GO_REF:0000107 NCBI chr 3:10,974,127...10,991,846
Ensembl chr 3:10,974,126...10,991,874
JBrowse link
G SYNJ1 synaptojanin 1 IEA
IBA
(PMID:21873635) InterPro
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr13:196,230,101...196,330,512
Ensembl chr13:196,230,089...196,330,465
JBrowse link
G SYNJ2 synaptojanin 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:9,014,206...9,109,050
Ensembl chr 1:9,014,551...9,109,103
JBrowse link
G SYP synaptophysin IEA Ensembl GO_REF:0000107 NCBI chr  X:43,232,190...43,246,764
Ensembl chr  X:43,232,195...43,246,682
JBrowse link
G SYT1 synaptotagmin 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:101,871,313...102,394,310
Ensembl chr 5:101,871,312...102,020,847
JBrowse link
G SYT2 synaptotagmin 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr10:24,638,645...24,727,198
Ensembl chr10:24,638,704...24,669,846
JBrowse link
G SYT5 synaptotagmin 5 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:59,381,649...59,389,014
Ensembl chr 6:59,381,653...59,388,960
JBrowse link
G SYT8 synaptotagmin 8 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:1,245,988...1,250,422
Ensembl chr 2:1,248,077...1,250,129
JBrowse link
G TBC1D24 TBC1 domain family member 24 IEA Ensembl GO_REF:0000107 NCBI chr 3:39,545,688...39,572,320 JBrowse link
G VAMP2 vesicle associated membrane protein 2 ISO (MGI:MGI:3573806|PMID:15475946) UniProt PMID:15475946 MGI:MGI:3573806 NCBI chr12:53,378,407...53,382,243 JBrowse link
synaptic vesicle exocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CADPS calcium dependent secretion activator IEA InterPro GO_REF:0000002 NCBI chr13:43,979,694...44,482,985 JBrowse link
G CADPS2 calcium dependent secretion activator 2 IEA InterPro GO_REF:0000002 NCBI chr18:24,372,547...24,867,287
Ensembl chr18:24,372,544...24,867,284
JBrowse link
G CPLX1 complexin 1 IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr 8:197,876...231,721
Ensembl chr 8:197,881...232,038
JBrowse link
G CPLX2 complexin 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:81,732,527...81,813,189
Ensembl chr 2:81,732,528...81,813,271
JBrowse link
G CPLX3 complexin 3 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:58,712,743...58,717,028
Ensembl chr 7:58,712,744...58,716,997
JBrowse link
G CPLX4 complexin 4 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:161,632,403...161,663,161
Ensembl chr 1:161,634,934...161,675,730
JBrowse link
G DOC2A double C2 domain alpha ISO RGD PMID:10651871 RGD:1357914 NCBI chr 3:18,211,264...18,216,096
Ensembl chr 3:18,210,964...18,216,103
JBrowse link
G OTOF otoferlin IEA InterPro GO_REF:0000002 NCBI chr 3:112,478,188...112,581,105
Ensembl chr 3:112,478,027...112,581,100
JBrowse link
G P2RX7 purinergic receptor P2X 7 ISO (MGI:MGI:3529714|PMID:15713258) MGI PMID:15713258 MGI:MGI:3529714 NCBI chr14:31,415,188...31,476,502
Ensembl chr14:31,415,192...31,476,472
JBrowse link
G PPFIA3 PTPRF interacting protein alpha 3 ISO (MGI:MGI:6120581|PMID:29439199) SynGO PMID:29439199 MGI:MGI:6120581 NCBI chr 6:54,313,981...54,337,345
Ensembl chr 6:54,313,981...54,337,345
JBrowse link
G RAB3A RAB3A, member RAS oncogene family IEA Ensembl GO_REF:0000107 NCBI chr 2:59,603,090...59,609,773
Ensembl chr 2:59,603,117...59,609,767
JBrowse link
G SNAP25 synaptosome associated protein 25 IEA Ensembl GO_REF:0000107 NCBI chr17:19,096,115...19,227,580
Ensembl chr17:19,096,140...19,227,576
JBrowse link
G SNAPIN SNAP associated protein IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:95,987,524...95,989,527
Ensembl chr 4:95,984,358...95,989,474
JBrowse link
G SNCA synuclein alpha ISO (PMID:28288128) UniProt PMID:28288128 NCBI chr 8:129,247,724...129,388,307
Ensembl chr 8:129,248,819...129,388,307
JBrowse link
G SPTBN2 spectrin beta, non-erythrocytic 2 ISO PMID:9826670 UniProt PMID:9826670 RGD:8553838 NCBI chr 2:5,683,414...5,739,418
Ensembl chr 2:5,695,858...5,739,417
JBrowse link
G STX1A syntaxin 1A ISO (PMID:26635000)
(MGI:MGI:5790510|PMID:27466336)
UniProt
SynGO
PMID:26635000, PMID:27466336 MGI:MGI:5790510 NCBI chr 3:10,974,127...10,991,846
Ensembl chr 3:10,974,126...10,991,874
JBrowse link
G SYT1 synaptotagmin 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:101,871,313...102,394,310
Ensembl chr 5:101,871,312...102,020,847
JBrowse link
G SYT10 synaptotagmin 10 NOT ISO (MGI:MGI:5751674|PMID:21496647) UniProtKB PMID:21496647 MGI:MGI:5751674 NCBI chr 5:40,869,418...40,940,851
Ensembl chr 5:40,872,283...40,934,326
JBrowse link
G SYT2 synaptotagmin 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr10:24,638,645...24,727,198
Ensembl chr10:24,638,704...24,669,846
JBrowse link
G SYT5 synaptotagmin 5 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:59,381,649...59,389,014
Ensembl chr 6:59,381,653...59,388,960
JBrowse link
G SYT8 synaptotagmin 8 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:1,245,988...1,250,422
Ensembl chr 2:1,248,077...1,250,129
JBrowse link
G TRIM9 tripartite motif containing 9 ISO RGD PMID:11524423 RGD:631246 NCBI chr 1:180,723,281...180,830,555
Ensembl chr 1:180,723,287...180,830,243
JBrowse link
G UNC13A unc-13 homolog A ISO (MGI:MGI:1341485|PMID:10440375) SynGO PMID:10440375 MGI:MGI:1341485 NCBI chr 2:60,057,926...60,130,015 JBrowse link
G UNC13B unc-13 homolog B ISO (MGI:MGI:5795822|PMID:19700493) SynGO PMID:19700493 MGI:MGI:5795822 NCBI chr 1:235,918,751...236,158,098 JBrowse link
G UNC13C unc-13 homolog C IEA Ensembl GO_REF:0000107 NCBI chr 1:117,163,115...117,765,125
Ensembl chr 1:117,166,283...117,764,668
JBrowse link
G VAMP2 vesicle associated membrane protein 2 ISO (MGI:MGI:3573806|PMID:15475946)
PMID:1331807
(MGI:MGI:2153431|PMID:11691998)
UniProt
SynGO
MGI
PMID:1331807, PMID:11691998, PMID:15475946 MGI:MGI:2153431, MGI:MGI:3573806, RGD:13702243 NCBI chr12:53,378,407...53,382,243 JBrowse link
synaptic vesicle fusion to presynaptic active zone membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PRRT2 proline rich transmembrane protein 2 IEA Ensembl GO_REF:0000107 NCBI chr 3:18,048,614...18,052,481 JBrowse link
G PRSS38 serine protease 38 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:50,972,132...51,008,027
Ensembl chr 2:50,831,116...51,006,694
JBrowse link
G SNAP23 synaptosome associated protein 23 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:128,849,465...128,888,972
Ensembl chr 1:128,847,931...128,888,947
JBrowse link
G SNAP29 synaptosome associated protein 29 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr14:50,492,187...50,511,475
Ensembl chr14:50,492,154...50,511,456
JBrowse link
G SNAPIN SNAP associated protein ISO (MGI:MGI:4430710|PMID:19217378) MGI PMID:19217378 MGI:MGI:4430710 NCBI chr 4:95,987,524...95,989,527
Ensembl chr 4:95,984,358...95,989,474
JBrowse link
G STX11 syntaxin 11 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:21,127,871...21,170,321
Ensembl chr 1:21,127,559...21,159,691
JBrowse link
G STX1A syntaxin 1A IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 3:10,974,127...10,991,846
Ensembl chr 3:10,974,126...10,991,874
JBrowse link
G STX1B syntaxin 1B IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 3:17,439,563...17,459,517
Ensembl chr 3:17,439,581...17,459,516
JBrowse link
G STX2 syntaxin 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr14:24,341,473...24,380,536
Ensembl chr14:24,341,333...24,380,630
JBrowse link
G STX3 syntaxin 3 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:11,694,788...11,739,858
Ensembl chr 2:11,694,859...11,740,744
JBrowse link
G STX4 syntaxin 4 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 3:17,422,266...17,431,377
Ensembl chr 3:17,416,842...17,431,053
JBrowse link
synaptic vesicle lumen acidification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CLCN3 chloride voltage-gated channel 3 ISO (MGI:MGI:2182197|PMID:11182090)
(MGI:MGI:5006894|PMID:21378974)
SynGO
MGI
PMID:11182090, PMID:21378974 MGI:MGI:2182197, MGI:MGI:5006894 NCBI chr14:20,037,628...20,127,160
Ensembl chr14:20,026,929...20,127,155
JBrowse link
G SLC17A7 solute carrier family 17 member 7 IEA Ensembl GO_REF:0000107 NCBI chr 6:54,511,121...54,521,616
Ensembl chr 6:54,511,121...54,521,611
JBrowse link
synaptic vesicle priming term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CADPS calcium dependent secretion activator IEA Ensembl GO_REF:0000107 NCBI chr13:43,979,694...44,482,985 JBrowse link
G CADPS2 calcium dependent secretion activator 2 IEA Ensembl GO_REF:0000107 NCBI chr18:24,372,547...24,867,287
Ensembl chr18:24,372,544...24,867,284
JBrowse link
G ERC1 ELKS/RAB6-interacting/CAST family member 1 ISO (MGI:MGI:5882646|PMID:27253063) SynGO PMID:27253063 MGI:MGI:5882646 NCBI chr 5:68,223,722...68,608,705
Ensembl chr 5:68,223,389...68,608,703
JBrowse link
G ERC2 ELKS/RAB6-interacting/CAST family member 2 ISO (MGI:MGI:4415657|PMID:19874790) SynGO PMID:19874790 MGI:MGI:4415657 NCBI chr13:37,388,513...38,367,512
Ensembl chr13:37,388,517...38,367,512
JBrowse link
G NAPA NSF attachment protein alpha IEA Ensembl GO_REF:0000107 NCBI chr 6:53,249,330...53,275,304
Ensembl chr 6:53,238,678...53,275,230
JBrowse link
G OTOF otoferlin IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 3:112,478,188...112,581,105
Ensembl chr 3:112,478,027...112,581,100
JBrowse link
G PRSS38 serine protease 38 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:50,972,132...51,008,027
Ensembl chr 2:50,831,116...51,006,694
JBrowse link
G RIMS1 regulating synaptic membrane exocytosis 1 ISO (MGI:MGI:4887275|PMID:21262469)
(MGI:MGI:4887275|PMID:21262469), (MGI:MGI:5432438|PMID:22753485)
SynGO PMID:21262469, PMID:22753485 MGI:MGI:4887275, MGI:MGI:5432438 NCBI chr 1:51,785,140...52,246,456
Ensembl chr 1:51,785,495...52,244,934
JBrowse link
G RIMS2 regulating synaptic membrane exocytosis 2 ISO (MGI:MGI:5432438|PMID:22753485) SynGO PMID:22753485 MGI:MGI:5432438 NCBI chr 4:32,999,615...33,613,413
Ensembl chr 4:32,999,613...33,613,469
JBrowse link
G SNAP23 synaptosome associated protein 23 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:128,849,465...128,888,972
Ensembl chr 1:128,847,931...128,888,947
JBrowse link
G SNAP29 synaptosome associated protein 29 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr14:50,492,187...50,511,475
Ensembl chr14:50,492,154...50,511,456
JBrowse link
G SNCA synuclein alpha IEA Ensembl GO_REF:0000107 NCBI chr 8:129,247,724...129,388,307
Ensembl chr 8:129,248,819...129,388,307
JBrowse link
G STXBP1 syntaxin binding protein 1 IEA Ensembl GO_REF:0000107 NCBI chr 1:268,116,124...268,205,805
Ensembl chr 1:268,116,118...268,213,921
JBrowse link
G SV2A synaptic vesicle glycoprotein 2A ISO (MGI:MGI:3831988|PMID:19176798) SynGO PMID:19176798 MGI:MGI:3831988 NCBI chr 4:99,138,319...99,153,153
Ensembl chr 4:99,138,342...99,153,149
JBrowse link
G SYNJ1 synaptojanin 1 ISO (MGI:MGI:2447947|PMID:12481038) MGI PMID:12481038 MGI:MGI:2447947 NCBI chr13:196,230,101...196,330,512
Ensembl chr13:196,230,089...196,330,465
JBrowse link
G UNC13A unc-13 homolog A IEA InterPro GO_REF:0000002 NCBI chr 2:60,057,926...60,130,015 JBrowse link
G UNC13B unc-13 homolog B IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:235,918,751...236,158,098 JBrowse link
G UNC13C unc-13 homolog C ISO PMID:22966208 ParkinsonsUK-UCL PMID:22966208 RGD:11535109 NCBI chr 1:117,163,115...117,765,125
Ensembl chr 1:117,166,283...117,764,668
JBrowse link
G VAMP1 vesicle associated membrane protein 1 ISO (MGI:MGI:6189249|PMID:24944211) SynGO PMID:24944211 MGI:MGI:6189249 NCBI chr 5:64,181,496...64,188,275 JBrowse link
synaptic vesicle recycling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AP1S2 adaptor related protein complex 1 subunit sigma 2 ISO (MGI:MGI:5617942|PMID:20203623) MGI PMID:20203623 MGI:MGI:5617942 NCBI chr  X:12,367,785...12,397,672
Ensembl chr  X:12,367,156...12,398,496
JBrowse link
G RAB3A RAB3A, member RAS oncogene family ISO PMID:16141272 ParkinsonsUK-UCL PMID:16141272 RGD:8693376 NCBI chr 2:59,603,090...59,609,773
Ensembl chr 2:59,603,117...59,609,767
JBrowse link
G RAB5A RAB5A, member RAS oncogene family IEA Ensembl GO_REF:0000107 NCBI chr13:6,905,302...6,940,165
Ensembl chr13:6,905,348...6,941,553
JBrowse link
G STON2 stonin 2 IEA InterPro GO_REF:0000002 NCBI chr 7:104,034,913...104,189,735
Ensembl chr 7:104,032,725...104,189,687
JBrowse link
G SYT7 synaptotagmin 7 IEA Ensembl GO_REF:0000107 NCBI chr 2:9,947,962...10,012,713
Ensembl chr 2:9,947,925...10,012,521
JBrowse link
synaptic vesicle recycling via endosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCL2L1 BCL2 like 1 ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr17:35,366,139...35,415,798
Ensembl chr17:35,366,141...35,415,359
JBrowse link
G DNM1L dynamin 1 like ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr 5:41,571,054...41,636,058 JBrowse link
G KIAA1107 KIAA1107 ortholog ISO (MGI:MGI:6104538|PMID:29262337) UniProt PMID:29262337 MGI:MGI:6104538 NCBI chr 4:124,859,271...124,950,420
Ensembl chr 4:124,858,099...124,950,427
JBrowse link
synaptic vesicle targeting term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NLGN1 neuroligin 1 IEA Ensembl GO_REF:0000107 NCBI chr13:111,851,007...112,727,202
Ensembl chr13:112,036,053...112,725,618
JBrowse link
G PSEN1 presenilin 1 IEA Ensembl GO_REF:0000107 NCBI chr 7:96,478,179...96,567,884
Ensembl chr 7:96,478,181...96,569,132
JBrowse link
G SCRIB scribble planar cell polarity protein ISO (MGI:MGI:4365512|PMID:19458197) UniProtKB PMID:19458197 MGI:MGI:4365512 NCBI chr 4:824,925...852,360 JBrowse link
synaptic vesicle uncoating term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DNAJC6 DnaJ heat shock protein family (Hsp40) member C6 IEA Ensembl GO_REF:0000107 NCBI chr 6:146,990,115...147,161,010
Ensembl chr 6:146,989,325...147,155,132
JBrowse link
G SH3GL1 SH3 domain containing GRB2 like 1, endophilin A2 IEA Ensembl GO_REF:0000107 NCBI chr 2:74,414,453...74,445,450
Ensembl chr 2:74,414,465...74,449,433
JBrowse link
G SH3GL2 SH3 domain containing GRB2 like 2, endophilin A1 IEA Ensembl GO_REF:0000107 NCBI chr 1:205,081,227...205,285,359
Ensembl chr 1:205,081,227...205,285,343
JBrowse link
G SH3GL3 SH3 domain containing GRB2 like 3, endophilin A3 ISO (MGI:MGI:5300660|PMID:22099461) SynGO PMID:22099461 MGI:MGI:5300660 NCBI chr 7:51,381,091...51,514,253
Ensembl chr 7:51,377,618...51,540,296
JBrowse link
G SYNJ1 synaptojanin 1 ISO (MGI:MGI:1346710|PMID:10535736)
(MGI:MGI:2447947|PMID:12481038)
(MGI:MGI:1346710|PMID:10535736), (MGI:MGI:5300660|PMID:22099461)
SynGO
MGI
PMID:10535736, PMID:12481038, PMID:22099461 MGI:MGI:1346710, MGI:MGI:2447947, MGI:MGI:5300660 NCBI chr13:196,230,101...196,330,512
Ensembl chr13:196,230,089...196,330,465
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16545
    localization 5909
      establishment of localization 4408
        establishment of localization in cell 2044
          synaptic vesicle cycle 234
            neurotransmitter loading into synaptic vesicle + 10
            regulation of synaptic vesicle cycle + 12
            synaptic vesicle clustering + 17
            synaptic vesicle exocytosis + 144
            synaptic vesicle lumen acidification + 2
            synaptic vesicle recycling + 81
Path 2
Term Annotations click to browse term
  biological_process 16545
    localization 5909
      establishment of localization 4408
        transport 4261
          vesicle-mediated transport 1447
            vesicle-mediated transport in synapse 264
              synaptic vesicle cycle 234
                neurotransmitter loading into synaptic vesicle + 10
                regulation of synaptic vesicle cycle + 12
                synaptic vesicle clustering + 17
                synaptic vesicle exocytosis + 144
                synaptic vesicle lumen acidification + 2
                synaptic vesicle recycling + 81
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.