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ONTOLOGY REPORT - ANNOTATIONS


Term:synaptic vesicle cycle
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Accession:GO:0099504 term browser browse the term
Definition:A biological process in which synaptic vesicles are loaded with neurotransmitters, move to the active zone, exocytose and are then recycled via endocytosis, ultimately leading to reloading with neurotransmitters.


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synaptic vesicle cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brsk1 BR serine/threonine kinase 1 ISO (MGI:MGI:5707546|PMID:26444684) ARUK-UCL PMID:26444684 MGI:MGI:5707546 NCBI chrNW_004936886:541,831...567,197 JBrowse link
G Stxbp5 syntaxin binding protein 5 ISO PMID:27807164 SynGO PMID:27807164 RGD:13702312 NCBI chrNW_004936489:449,029...771,870 JBrowse link
G Syn1 synapsin I ISO (MGI:MGI:63816|PMID:7902212) MGI PMID:7902212 MGI:MGI:63816 NCBI chrNW_004936502:13,334,998...13,387,082 JBrowse link
G Syn2 synapsin II ISO (MGI:MGI:74599|PMID:7777057) SynGO PMID:7777057 MGI:MGI:74599 NCBI chrNW_004936602:1,460,602...1,506,509 JBrowse link
G Syn3 synapsin III ISO (MGI:MGI:2180939|PMID:12040043) SynGO PMID:12040043 MGI:MGI:2180939 NCBI chrNW_004936492:6,836,441...7,253,867 JBrowse link
aminergic neurotransmitter loading into synaptic vesicle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddc dopa decarboxylase ISO RGD PMID:19903816 RGD:5128868 NCBI chrNW_004936686:1,322,153...1,405,434 JBrowse link
G Slc18a2 solute carrier family 18 member A2 ISO RGD PMID:19903816 RGD:5128868 NCBI chrNW_004936486:7,075,373...7,108,984 JBrowse link
G Th tyrosine hydroxylase ISO RGD PMID:19903816 RGD:5128868 NCBI chrNW_004936794:478,651...486,887 JBrowse link
calcium ion-regulated exocytosis of neurotransmitter term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1a calcium voltage-gated channel subunit alpha1 A ISO (MGI:MGI:1353373|PMID:10670432) MGI PMID:10670432 MGI:MGI:1353373 NCBI chrNW_004936659:2,201,606...2,269,625 JBrowse link
G Doc2b double C2 domain beta ISO (MGI:MGI:4439222|PMID:20150444) UniProtKB
UniProt
PMID:20150444 MGI:MGI:4439222, RGD:8554647 NCBI chrNW_004936538:7,461,030...7,486,648 JBrowse link
G Rims1 regulating synaptic membrane exocytosis 1 ISO (MGI:MGI:3703478|PMID:17124501) MGI PMID:17124501 MGI:MGI:3703478 NCBI chrNW_004936618:3,678,400...4,047,994 JBrowse link
G Rims2 regulating synaptic membrane exocytosis 2 ISO (MGI:MGI:3703478|PMID:17124501) MGI PMID:17124501 MGI:MGI:3703478 NCBI chrNW_004936470:39,725,092...40,270,268 JBrowse link
G Snap25 synaptosome associated protein 25 ISO RGD PMID:14980208 RGD:1581082 NCBI chrNW_004936485:9,198,744...9,279,854 JBrowse link
G Stx1b syntaxin 1B ISO (MGI:MGI:3803800|PMID:18703708) ParkinsonsUK-UCL PMID:18703708 MGI:MGI:3803800 NCBI chrNW_004936501:13,370,678...13,378,933 JBrowse link
G Syt1 synaptotagmin 1 ISO (MGI:MGI:5141208|PMID:21521611) MGI PMID:21521611 MGI:MGI:5141208 NCBI chrNW_004936698:65,210...575,538 JBrowse link
G Syt7 synaptotagmin 7 ISO (MGI:MGI:5707519|PMID:26738595) UniProtKB PMID:26738595 MGI:MGI:5707519 NCBI chrNW_004936581:1,516,199...1,557,992 JBrowse link
calcium-dependent activation of synaptic vesicle fusion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prrt2 proline rich transmembrane protein 2 ISO (MGI:MGI:5792766|PMID:27052163) SynGO PMID:27052163 MGI:MGI:5792766 NCBI chrNW_004936501:12,660,181...12,663,788 JBrowse link
G Syt1 synaptotagmin 1 ISO (MGI:MGI:69538|PMID:7954835) SynGO PMID:7954835 MGI:MGI:69538 NCBI chrNW_004936698:65,210...575,538 JBrowse link
G Syt2 synaptotagmin 2 ISO (MGI:MGI:3695515|PMID:17192432) SynGO PMID:17192432 MGI:MGI:3695515 NCBI chrNW_004936567:1,941,651...1,984,422 JBrowse link
G Syt7 synaptotagmin 7 ISO (MGI:MGI:5554634|PMID:24267651) SynGO PMID:24267651 MGI:MGI:5554634 NCBI chrNW_004936581:1,516,199...1,557,992 JBrowse link
G Syt9 synaptotagmin 9 ISO (MGI:MGI:3714434|PMID:17521570) SynGO PMID:17521570 MGI:MGI:3714434 NCBI chrNW_004936841:542,211...706,272 JBrowse link
fast, calcium ion-dependent exocytosis of neurotransmitter term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Syt1 synaptotagmin 1 ISO (MGI:MGI:3653150|PMID:9194562), (MGI:MGI:69538|PMID:7954835)
(MGI:MGI:3040539|PMID:12526776)
ParkinsonsUK-UCL PMID:7954835, PMID:9194562, PMID:12526776 MGI:MGI:3040539, MGI:MGI:3653150, MGI:MGI:69538 NCBI chrNW_004936698:65,210...575,538 JBrowse link
induction of synaptic vesicle exocytosis by positive regulation of presynaptic cytosolic calcium ion concentration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Erc1 ELKS/RAB6-interacting/CAST family member 1 ISO (MGI:MGI:5608612|PMID:25209271) GOC PMID:25209271 MGI:MGI:5608612 NCBI chrNW_004936606:1,201,420...1,713,894 JBrowse link
negative regulation of synaptic vesicle clustering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pten phosphatase and tensin homolog ISO (MGI:MGI:3629385|PMID:16675393), (MGI:MGI:3772418|PMID:18082964) CACAO PMID:16675393, PMID:18082964 MGI:MGI:3629385, MGI:MGI:3772418 NCBI chrNW_004936735:1,252,414...1,338,318 JBrowse link
negative regulation of synaptic vesicle endocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Syt11 synaptotagmin 11 ISO PMID:26589353 ParkinsonsUK-UCL PMID:26589353 RGD:11079192 NCBI chrNW_004936580:5,123,196...5,142,976 JBrowse link
negative regulation of synaptic vesicle exocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Braf B-Raf proto-oncogene, serine/threonine kinase ISO (MGI:MGI:5490391|PMID:23616533) MGI PMID:23616533 MGI:MGI:5490391 NCBI chrNW_004936592:4,728,371...4,833,830 JBrowse link
G Fmr1 FMRP translational regulator 1 ISO PMID:24709664 UniProt PMID:24709664 RGD:11059581 NCBI chrNW_004936513:1,290,038...1,327,850 JBrowse link
G Rap1a RAP1A, member of RAS oncogene family ISO (MGI:MGI:5490391|PMID:23616533) MGI PMID:23616533 MGI:MGI:5490391 NCBI chrNW_004936690:275,840...363,752 JBrowse link
G Rap1b RAP1B, member of RAS oncogene family ISO (MGI:MGI:5490391|PMID:23616533) MGI PMID:23616533 MGI:MGI:5490391 NCBI chrNW_004936545:6,567,873...6,578,404 JBrowse link
G Syt4 synaptotagmin 4 ISO (MGI:MGI:4457852|PMID:19448629) SynGO-UCL PMID:19448629 MGI:MGI:4457852 NCBI chrNW_004936517:3,035,840...3,044,065 JBrowse link
negative regulation of synaptic vesicle recycling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cyfip1 cytoplasmic FMR1 interacting protein 1 ISO RGD PMID:26843638 RGD:11342679 NCBI chrNW_004936471:38,264,455...38,331,995 JBrowse link
G Stx1b syntaxin 1B ISO (MGI:MGI:5603022|PMID:24587181) ParkinsonsUK-UCL PMID:24587181 MGI:MGI:5603022 NCBI chrNW_004936501:13,370,678...13,378,933 JBrowse link
neurotransmitter loading into synaptic vesicle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc17a6 solute carrier family 17 member 6 ISO (PMID:11698620)
PMID:11502256
SynGO PMID:11502256, PMID:11698620 RGD:13702232 NCBI chrNW_004936654:3,039,825...3,082,788 JBrowse link
G Slc17a7 solute carrier family 17 member 7 ISO PMID:10938000
(MGI:MGI:3616153|PMID:15118123)
SynGO PMID:10938000, PMID:15118123 MGI:MGI:3616153, RGD:12050146 NCBI chrNW_004936664:3,307,562...3,318,184 JBrowse link
G Slc17a8 solute carrier family 17 member 8 ISO (PMID:12097496) SynGO PMID:12097496 NCBI chrNW_004936492:13,436,136...13,486,173 JBrowse link
G Slc18a2 solute carrier family 18 member A2 ISO (MGI:MGI:1194523|PMID:9427251) SynGO PMID:9427251 MGI:MGI:1194523 NCBI chrNW_004936486:7,075,373...7,108,984 JBrowse link
G Slc18a3 solute carrier family 18 member A3 ISO (MGI:MGI:6189683|PMID:4075114)
PMID:9182805
MGI
SynGO
PMID:4075114, PMID:9182805 MGI:MGI:6189683, RGD:13702424 NCBI chrNW_004936728:703,688...706,317 JBrowse link
G Slc32a1 solute carrier family 32 member 1 ISO PMID:9349821 SynGO PMID:9349821 RGD:730037 NCBI chrNW_004936561:2,709,580...2,714,313 JBrowse link
positive regulation of calcium ion-dependent exocytosis of neurotransmitter term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Syt1 synaptotagmin 1 ISO (MGI:MGI:2179533|PMID:11242035) UniProt PMID:11242035 MGI:MGI:2179533 NCBI chrNW_004936698:65,210...575,538 JBrowse link
positive regulation of synaptic vesicle clustering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl2l1 BCL2 like 1 ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chrNW_004936485:18,654,046...18,707,324 JBrowse link
G Cdh2 cadherin 2 ISO (MGI:MGI:4457945|PMID:20534458) BHF-UCL PMID:20534458 MGI:MGI:4457945 NCBI chrNW_004936550:6,885,484...7,067,001 JBrowse link
G Magi2 membrane associated guanylate kinase, WW and PDZ domain containing 2 ISO (MGI:MGI:4457945|PMID:20534458) BHF-UCL PMID:20534458 MGI:MGI:4457945 NCBI chrNW_004936479:21,373,917...22,062,498 JBrowse link
G Nlgn1 neuroligin 1 ISO (MGI:MGI:5284797|PMID:15620359) BHF-UCL PMID:15620359 MGI:MGI:5284797 NCBI chrNW_004936703:951,935...1,415,991 JBrowse link
G Nlgn2 neuroligin 2 ISO (MGI:MGI:5284797|PMID:15620359) BHF-UCL PMID:15620359 MGI:MGI:5284797 NCBI chrNW_004936595:692,340...704,650 JBrowse link
G Nlgn3 neuroligin 3 ISO (MGI:MGI:5286761|PMID:21808020) CACAO PMID:21808020 MGI:MGI:5286761 NCBI chrNW_004936762:435,729...458,261 JBrowse link
G Picalm phosphatidylinositol binding clathrin assembly protein ISO RGD PMID:22851330 RGD:13506174 NCBI chrNW_004936498:13,785,638...13,885,931 JBrowse link
G Snap91 synaptosome associated protein 91 ISO RGD PMID:22851330 RGD:13506174 NCBI chrNW_004936510:7,222,200...7,345,138 JBrowse link
positive regulation of synaptic vesicle endocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap2m1 adaptor related protein complex 2 subunit mu 1 ISO RGD PMID:19762466 RGD:13461856 NCBI chrNW_004936578:5,680,748...5,691,666 JBrowse link
G Bcl2l1 BCL2 like 1 ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chrNW_004936485:18,654,046...18,707,324 JBrowse link
G Dnm1 dynamin 1 ISO RGD PMID:17437541 RGD:8554440 NCBI chrNW_004936487:15,767,897...15,797,722 JBrowse link
G Dnm1l dynamin 1 like ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chrNW_004936607:3,576,357...3,632,423 JBrowse link
G Lrrk2 leucine rich repeat kinase 2 ISO RGD PMID:18445495 RGD:13462049 NCBI chrNW_004936607:628,469...761,117 JBrowse link
G Mff mitochondrial fission factor ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chrNW_004936525:8,604,478...8,636,352 JBrowse link
G Nlgn1 neuroligin 1 ISO PMID:19628693
(MGI:MGI:4355770|PMID:19628693)
BHF-UCL PMID:19628693 MGI:MGI:4355770, RGD:8554760 NCBI chrNW_004936703:951,935...1,415,991 JBrowse link
G Picalm phosphatidylinositol binding clathrin assembly protein ISO RGD PMID:21808019 RGD:13506237 NCBI chrNW_004936498:13,785,638...13,885,931 JBrowse link
G Ppp3cc protein phosphatase 3 catalytic subunit gamma ISO RGD PMID:26627835 RGD:11532172 NCBI chrNW_004936555:6,216,202...6,283,012 JBrowse link
G Sh3gl1 SH3 domain containing GRB2 like 1, endophilin A2 ISO RGD PMID:14532001 RGD:13464359 NCBI chrNW_004936588:2,504,372...2,535,993 JBrowse link
G Snap91 synaptosome associated protein 91 ISO RGD PMID:21808019 RGD:13506237 NCBI chrNW_004936510:7,222,200...7,345,138 JBrowse link
G Tor1a torsin family 1 member A ISO (PMID:21102408) UniProtKB PMID:21102408 NCBI chrNW_004936487:17,012,661...17,020,657 JBrowse link
positive regulation of synaptic vesicle exocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl2l1 BCL2 like 1 ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chrNW_004936485:18,654,046...18,707,324 JBrowse link
G Dnm1l dynamin 1 like ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chrNW_004936607:3,576,357...3,632,423 JBrowse link
G Nlgn1 neuroligin 1 ISO PMID:19628693
(MGI:MGI:4355770|PMID:19628693)
BHF-UCL PMID:19628693 MGI:MGI:4355770, RGD:8554760 NCBI chrNW_004936703:951,935...1,415,991 JBrowse link
G Slc4a8 solute carrier family 4 member 8 ISO (MGI:MGI:5013899|PMID:21593314) ARUK-UCL PMID:21593314 MGI:MGI:5013899 NCBI chrNW_004936512:8,988,212...9,060,287 JBrowse link
positive regulation of synaptic vesicle priming term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101974478 protein unc-13 homolog B ISO PMID:21262469 ParkinsonsUK-UCL PMID:21262469 RGD:10047275 NCBI chrNW_004936524:3,320,859...3,369,865 JBrowse link
G Rims1 regulating synaptic membrane exocytosis 1 ISO PMID:21262469 ParkinsonsUK-UCL PMID:21262469 RGD:10047275 NCBI chrNW_004936618:3,678,400...4,047,994 JBrowse link
positive regulation of synaptic vesicle recycling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnm1 dynamin 1 ISO RGD PMID:17880892 RGD:8553820 NCBI chrNW_004936487:15,767,897...15,797,722 JBrowse link
G Dnm3 dynamin 3 ISO RGD PMID:23687302 RGD:13462065 NCBI chrNW_004936481:14,971,977...15,411,253 JBrowse link
G Plaa phospholipase A2 activating protein ISO (MGI:MGI:5883825|PMID:28413018) UniProtKB PMID:28413018 MGI:MGI:5883825 NCBI chrNW_004936611:2,665,294...2,698,372 JBrowse link
presynaptic dense core vesicle exocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cadps calcium dependent secretion activator ISO (MGI:MGI:5634021|PMID:25719439) SynGO PMID:25719439 MGI:MGI:5634021 NCBI chrNW_004936637:3,543,615...4,023,710 JBrowse link
G LOC101974478 protein unc-13 homolog B ISO (MGI:MGI:5819330|PMID:26575293) SynGO PMID:26575293 MGI:MGI:5819330 NCBI chrNW_004936524:3,320,859...3,369,865 JBrowse link
G Stxbp1 syntaxin binding protein 1 ISO (MGI:MGI:3621672|PMID:11545717) SynGO PMID:11545717 MGI:MGI:3621672 NCBI chrNW_004936487:15,300,758...15,367,475 JBrowse link
G Syt6 synaptotagmin 6 ISO PMID:26216953 SynGO PMID:26216953 RGD:13702162 NCBI chrNW_004936690:2,435,573...2,497,332 JBrowse link
G Unc13a unc-13 homolog A ISO (MGI:MGI:5819330|PMID:26575293) SynGO PMID:26575293 MGI:MGI:5819330 NCBI chrNW_004936596:3,311,358...3,370,833 JBrowse link
regulation of calcium ion-dependent exocytosis of neurotransmitter term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2a2 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2 ISO (MGI:MGI:4866942|PMID:21106823) MGI PMID:21106823 MGI:MGI:4866942 NCBI chrNW_004936558:3,300,941...3,357,595 JBrowse link
G Rab3gap1 RAB3 GTPase activating protein catalytic subunit 1 ISO (MGI:MGI:3652690|PMID:16782817) ParkinsonsUK-UCL PMID:16782817 MGI:MGI:3652690 NCBI chrNW_004936469:40,642,240...40,727,831 JBrowse link
regulation of neurotransmitter loading into synaptic vesicle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc10a4 solute carrier family 10 member 4 ISO (MGI:MGI:5913479|PMID:25176177) SynGO PMID:25176177 MGI:MGI:5913479 NCBI chrNW_004936482:14,496,386...14,502,313 JBrowse link
regulation of presynaptic dense core granule exocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G P2rx7 purinergic receptor P2X 7 ISO PMID:24037803 SynGO PMID:24037803 RGD:13702177 NCBI chrNW_004936558:3,106,819...3,149,689 JBrowse link
G Syt4 synaptotagmin 4 ISO (MGI:MGI:4457852|PMID:19448629) SynGO PMID:19448629 MGI:MGI:4457852 NCBI chrNW_004936517:3,035,840...3,044,065 JBrowse link
regulation of recycling endosome localization within postsynapse term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gripap1 GRIP1 associated protein 1 ISO PMID:20098723 SynGO PMID:20098723 RGD:12050105 NCBI chrNW_004936721:892,704...916,965 JBrowse link
regulation of synaptic vesicle budding from presynaptic endocytic zone membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc2a4 solute carrier family 2 member 4 ISO PMID:28111082 SynGO PMID:28111082 RGD:13702195 NCBI chrNW_004936595:567,267...574,051 JBrowse link
regulation of synaptic vesicle clustering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pcdh17 protocadherin 17 ISO (MGI:MGI:5514320|PMID:23684785) MGI PMID:23684785 MGI:MGI:5514320 NCBI chrNW_004936820:764,016...860,325 JBrowse link
regulation of synaptic vesicle cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bsn bassoon presynaptic cytomatrix protein ISO (MGI:MGI:4879069|PMID:21092860) SynGO PMID:21092860 MGI:MGI:4879069 NCBI chrNW_004936529:1,182,872...1,287,794 JBrowse link
G Cdk5r1 cyclin dependent kinase 5 regulatory subunit 1 ISO PMID:24254883 SynGO PMID:24254883 RGD:13702178 NCBI chrNW_004936538:2,411,194...2,415,106 JBrowse link
G Dnajc5 DnaJ heat shock protein family (Hsp40) member C5 ISO (MGI:MGI:5440402|PMID:22500637) MGI PMID:22500637 MGI:MGI:5440402 NCBI chrNW_004936514:11,131,666...11,139,404 JBrowse link
G Nrxn1 neurexin 1 ISO (MGI:MGI:4366191|PMID:19822762) SynGO PMID:19822762 MGI:MGI:4366191 NCBI chrNW_004936508:1,889,640...2,954,039 JBrowse link
G Pld1 phospholipase D1 ISO (PMID:11752468) SynGO PMID:11752468 NCBI chrNW_004936593:844,634...1,049,478 JBrowse link
G Pls3 plastin 3 ISO (MGI:MGI:5469774|PMID:23263861) SynGO PMID:23263861 MGI:MGI:5469774 NCBI chrNW_004936499:246,042...335,440 JBrowse link
G Prkar1b protein kinase cAMP-dependent type I regulatory subunit beta ISO (MGI:MGI:77916|PMID:8548807) SynGO PMID:8548807 MGI:MGI:77916 NCBI chrNW_004936754:842,697...963,002 JBrowse link
G Rab3b RAB3B, member RAS oncogene family ISO (PMID:20007772) SynGO PMID:20007772 NCBI chrNW_004936522:8,924,724...8,985,309 JBrowse link
G Rapgef4 Rap guanine nucleotide exchange factor 4 ISO (MGI:MGI:5641291|PMID:25904804) MGI PMID:25904804 MGI:MGI:5641291 NCBI chrNW_004936509:2,722,279...3,006,436 JBrowse link
G Snap29 synaptosome associated protein 29 ISO PMID:15890653 SynGO PMID:15890653 RGD:13702146 NCBI chrNW_004936619:2,377,284...2,402,049 JBrowse link
G Syn1 synapsin I ISO (MGI:MGI:82574|PMID:8794863) MGI PMID:8794863 MGI:MGI:82574 NCBI chrNW_004936502:13,334,998...13,387,082 JBrowse link
regulation of synaptic vesicle docking term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Camk2a calcium/calmodulin dependent protein kinase II alpha ISO (MGI:MGI:3763684|PMID:17660813) MGI PMID:17660813 MGI:MGI:3763684 NCBI chrNW_004936504:4,636,863...4,700,887 JBrowse link
regulation of synaptic vesicle endocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Btbd9 BTB domain containing 9 ISO (MGI:MGI:5438074|PMID:22536397) MGI PMID:22536397 MGI:MGI:5438074 NCBI chrNW_004936476:20,953,377...21,351,925 JBrowse link
G Calm2 calmodulin 2 ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chrNW_004936508:5,207,909...5,223,780 JBrowse link
G Calm3 calmodulin 3 ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chrNW_004936664:471,446...480,858 JBrowse link
G Dgkq diacylglycerol kinase theta ISO (MGI:MGI:5807028|PMID:26748701) SynGO PMID:26748701 MGI:MGI:5807028 NCBI chrNW_004936477:22,225,624...22,238,825 JBrowse link
G Dnm1 dynamin 1 ISO RGD PMID:16648848 RGD:13504740 NCBI chrNW_004936487:15,767,897...15,797,722 JBrowse link
G LOC101967074 calmodulin ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chrNW_004936488:17,580,425...17,588,480 JBrowse link
G Lrrk2 leucine rich repeat kinase 2 ISO (MGI:MGI:6189511|PMID:25501810) SynGO PMID:25501810 MGI:MGI:6189511 NCBI chrNW_004936607:628,469...761,117 JBrowse link
G Picalm phosphatidylinositol binding clathrin assembly protein ISO RGD PMID:18842885 RGD:8554167 NCBI chrNW_004936498:13,785,638...13,885,931 JBrowse link
G Pip5k1c phosphatidylinositol-4-phosphate 5-kinase type 1 gamma ISO (MGI:MGI:3054280|PMID:15386003) MGI PMID:15386003 MGI:MGI:3054280 NCBI chrNW_004936588:2,070,873...2,088,144 JBrowse link
G Ppp3cb protein phosphatase 3 catalytic subunit beta ISO (MGI:MGI:4830393|PMID:20810903) MGI PMID:20810903 MGI:MGI:4830393 NCBI chrNW_004936521:5,576,705...5,614,738 JBrowse link
G Ppp3cc protein phosphatase 3 catalytic subunit gamma ISO PMID:26627835 SynGO PMID:26627835 RGD:11532172 NCBI chrNW_004936555:6,216,202...6,283,012 JBrowse link
G Rock1 Rho associated coiled-coil containing protein kinase 1 ISO (PMID:27160703) ARUK-UCL PMID:27160703 NCBI chrNW_004936550:730,462...874,601 JBrowse link
G Scamp5 secretory carrier membrane protein 5 ISO PMID:25057210 SynGO PMID:25057210 RGD:13702419 NCBI chrNW_004936471:33,936,721...33,958,439 JBrowse link
G Sh3gl1 SH3 domain containing GRB2 like 1, endophilin A2 ISO RGD PMID:22750032 RGD:13463484 NCBI chrNW_004936588:2,504,372...2,535,993 JBrowse link
G Slc17a7 solute carrier family 17 member 7 ISO RGD PMID:16815333 RGD:13504741 NCBI chrNW_004936664:3,307,562...3,318,184 JBrowse link
G Snap91 synaptosome associated protein 91 ISO RGD PMID:18842885 RGD:8554167 NCBI chrNW_004936510:7,222,200...7,345,138 JBrowse link
G Syt7 synaptotagmin 7 ISO (MGI:MGI:6189675|PMID:14532108) SynGO PMID:14532108 MGI:MGI:6189675 NCBI chrNW_004936581:1,516,199...1,557,992 JBrowse link
G Vamp4 vesicle associated membrane protein 4 ISO PMID:26607000 SynGO PMID:26607000 RGD:11058152 NCBI chrNW_004936481:15,480,865...15,515,851 JBrowse link
regulation of synaptic vesicle exocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adcy1 adenylate cyclase 1 ISO (MGI:MGI:1202483|PMID:9547227) MGI PMID:9547227 MGI:MGI:1202483 NCBI chrNW_004936478:20,310,509...20,477,506 JBrowse link
G Adora2a adenosine A2a receptor ISO PMID:15659214 SynGO PMID:15659214 RGD:1625642 NCBI chrNW_004936619:597,970...618,564 JBrowse link
G Adora2b adenosine A2b receptor ISO (MGI:MGI:6108216|PMID:25704806) SynGO PMID:25704806 MGI:MGI:6108216 NCBI chrNW_004936821:583,463...608,189 JBrowse link
G Adra1a adrenoceptor alpha 1A ISO PMID:12548707 SynGO PMID:12548707 RGD:13702265 NCBI chrNW_004936757:149,366...237,710 JBrowse link
G Adra2a adrenoceptor alpha 2A ISO (MGI:MGI:3761775|PMID:11927164) MGI PMID:11927164 MGI:MGI:3761775 NCBI chrNW_004936486:1,837,785...1,841,019 JBrowse link
G Adrb2 adrenoceptor beta 2 ISO PMID:17175110 SynGO PMID:17175110 RGD:5129150 NCBI chrNW_004936504:5,985,407...5,987,453 JBrowse link
G Apba1 amyloid beta precursor protein binding family A member 1 ISO (MGI:MGI:2450068|PMID:12547917), (MGI:MGI:3691953|PMID:17167098) SynGO PMID:12547917, PMID:17167098 MGI:MGI:2450068, MGI:MGI:3691953 NCBI chrNW_004936503:5,699,580...5,770,920 JBrowse link
G Apba2 amyloid beta precursor protein binding family A member 2 ISO (MGI:MGI:3691953|PMID:17167098) SynGO PMID:17167098 MGI:MGI:3691953 NCBI chrNW_004936483:1,062,971...1,315,059 JBrowse link
G Bace1 beta-secretase 1 ISO (MGI:MGI:3806404|PMID:18753368) MGI PMID:18753368 MGI:MGI:3806404 NCBI chrNW_004936542:2,514,297...2,539,088 JBrowse link
G Cacnb4 calcium voltage-gated channel auxiliary subunit beta 4 ISO (MGI:MGI:1340444|PMID:10322048) SynGO PMID:10322048 MGI:MGI:1340444 NCBI chrNW_004936469:25,494,820...25,745,783 JBrowse link
G Calm2 calmodulin 2 ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chrNW_004936508:5,207,909...5,223,780 JBrowse link
G Calm3 calmodulin 3 ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chrNW_004936664:471,446...480,858 JBrowse link
G Cask calcium/calmodulin dependent serine protein kinase ISO (MGI:MGI:3698294|PMID:17287346) MGI PMID:17287346 MGI:MGI:3698294 NCBI chrNW_004936502:7,933,312...8,281,492 JBrowse link
G Chrm2 cholinergic receptor muscarinic 2 ISO (MGI:MGI:2176006|PMID:11880500) SynGO PMID:11880500 MGI:MGI:2176006 NCBI chrNW_004936592:1,396,939...1,525,255 JBrowse link
G Chrna3 cholinergic receptor nicotinic alpha 3 subunit ISO PMID:12065717 SynGO PMID:12065717 RGD:13702272 NCBI chrNW_004936471:36,427,598...36,447,903 JBrowse link
G Chrna4 cholinergic receptor nicotinic alpha 4 subunit ISO (MGI:MGI:2673776|PMID:12944511) SynGO PMID:12944511 MGI:MGI:2673776 NCBI chrNW_004936514:10,680,893...10,695,859 JBrowse link
G Chrna5 cholinergic receptor nicotinic alpha 5 subunit ISO (MGI:MGI:6191866|PMID:19693710) SynGO PMID:19693710 MGI:MGI:6191866 NCBI chrNW_004936471:36,451,070...36,492,774 JBrowse link
G Chrna6 cholinergic receptor nicotinic alpha 6 subunit ISO (MGI:MGI:2673776|PMID:12944511) SynGO PMID:12944511 MGI:MGI:2673776 NCBI chrNW_004936785:17,588...28,565 JBrowse link
G Chrnb2 cholinergic receptor nicotinic beta 2 subunit ISO (MGI:MGI:2673776|PMID:12944511), (MGI:MGI:6189689|PMID:11145999) MGI PMID:11145999, PMID:12944511 MGI:MGI:2673776, MGI:MGI:6189689 NCBI chrNW_004936580:4,165,255...4,179,285 JBrowse link
G Chrnb3 cholinergic receptor nicotinic beta 3 subunit ISO (MGI:MGI:3028759|PMID:14657161) SynGO PMID:14657161 MGI:MGI:3028759 NCBI chrNW_004936785:46,076...72,529 JBrowse link
G Cspg5 chondroitin sulfate proteoglycan 5 ISO (MGI:MGI:3583729|PMID:15848802) SynGO PMID:15848802 MGI:MGI:3583729 NCBI chrNW_004936596:1,235,550...1,251,100 JBrowse link
G Cyth1 cytohesin 1 ISO PMID:9927699 SynGO PMID:9927699 RGD:13702340 NCBI chrNW_004936594:3,116,547...3,147,992 JBrowse link
G Dgki diacylglycerol kinase iota ISO (MGI:MGI:4936793|PMID:21119615) MGI PMID:21119615 MGI:MGI:4936793 NCBI chrNW_004936592:1,843,438...2,136,905 JBrowse link
G Drd1 dopamine receptor D1 ISO (MGI:MGI:5506871|PMID:22586226) SynGO PMID:22586226 MGI:MGI:5506871 NCBI chrNW_004936609:790,647...795,187 JBrowse link
G Drd2 dopamine receptor D2 ISO (MGI:MGI:2387277|PMID:12223553)
(MGI:MGI:2387277|PMID:12223553), (MGI:MGI:5506871|PMID:22586226)
SynGO PMID:12223553, PMID:22586226 MGI:MGI:2387277, MGI:MGI:5506871 NCBI chrNW_004936612:1,094,686...1,154,149 JBrowse link
G Drd4 dopamine receptor D4 ISO PMID:24155292 SynGO PMID:24155292 RGD:13702381 NCBI chrNW_004936888:468,334...471,254 JBrowse link
G Dtnbp1 dystrobrevin binding protein 1 ISO (MGI:MGI:3797662|PMID:18504299) SynGO PMID:18504299 MGI:MGI:3797662 NCBI chrNW_004936552:1,787,687...1,926,516 JBrowse link
G Dvl1 dishevelled segment polarity protein 1 ISO (MGI:MGI:5699934|PMID:26400647) SynGO PMID:26400647 MGI:MGI:5699934 NCBI chrNW_004936737:1,797,348...1,811,043 JBrowse link
G Fbxl20 F-box and leucine rich repeat protein 20 ISO (MGI:MGI:3765255|PMID:17803915) SynGO PMID:17803915 MGI:MGI:3765255 NCBI chrNW_004936490:14,521,037...14,623,741 JBrowse link
G Gipc1 GIPC PDZ domain containing family member 1 ISO (MGI:MGI:3654775|PMID:16819522) SynGO PMID:16819522 MGI:MGI:3654775 NCBI chrNW_004936659:3,019,829...3,030,280 JBrowse link
G Git1 GIT ArfGAP 1 ISO (MGI:MGI:5708768|PMID:26637799) SynGO PMID:26637799 MGI:MGI:5708768 NCBI chrNW_004936538:5,684,660...5,694,779 JBrowse link
G Git2 GIT ArfGAP 2 ISO (MGI:MGI:5708768|PMID:26637799) SynGO PMID:26637799 MGI:MGI:5708768 NCBI chrNW_004936769:1,529,983...1,574,805 JBrowse link
G Glra3 glycine receptor alpha 3 ISO (MGI:MGI:5770489|PMID:26851771) SynGO PMID:26851771 MGI:MGI:5770489 NCBI chrNW_004936516:5,692,535...5,855,694 JBrowse link
G Grin3a glutamate ionotropic receptor NMDA type subunit 3A ISO (MGI:MGI:6109389|PMID:25144876) MGI PMID:25144876 MGI:MGI:6109389 NCBI chrNW_004936524:9,720,777...9,884,984 JBrowse link
G Grm4 glutamate metabotropic receptor 4 ISO (MGI:MGI:83238|PMID:8815915) MGI PMID:8815915 MGI:MGI:83238 NCBI chrNW_004936476:24,866,356...24,968,362 JBrowse link
G Grm7 glutamate metabotropic receptor 7 ISO (MGI:MGI:3690146|PMID:12065412) SynGO PMID:12065412 MGI:MGI:3690146 NCBI chrNW_004936602:5,111,406...5,488,506 JBrowse link
G Grm8 glutamate metabotropic receptor 8 ISO PMID:15275822 SynGO PMID:15275822 RGD:6484726 NCBI chrNW_004936479:13,768,014...14,504,387 JBrowse link
G Gsk3b glycogen synthase kinase 3 beta ISO (PMID:17989287) SynGO PMID:17989287 NCBI chrNW_004936536:6,730,070...6,893,818 JBrowse link
G Htr1a 5-hydroxytryptamine receptor 1A ISO PMID:10381597 SynGO PMID:10381597 RGD:13702211 NCBI chrNW_004936480:5,042,531...5,047,157 JBrowse link
G Htr1b 5-hydroxytryptamine receptor 1B ISO PMID:17067296 SynGO PMID:17067296 RGD:13702319 NCBI chrNW_004936890:154,252...157,044 JBrowse link
G Htr2a 5-hydroxytryptamine receptor 2A ISO PMID:12196574 SynGO PMID:12196574 RGD:13702246 NCBI chrNW_004936565:335,238...394,683 JBrowse link
G Htr7 5-hydroxytryptamine receptor 7 ISO PMID:26779891 SynGO PMID:26779891 RGD:13702205 NCBI chrNW_004936601:3,569,626...3,626,782 JBrowse link
G Kcnh1 potassium voltage-gated channel subfamily H member 1 ISO (MGI:MGI:5917278|PMID:25556795) SynGO PMID:25556795 MGI:MGI:5917278 NCBI chrNW_004936557:2,133,596...2,493,170 JBrowse link
G LOC101967074 calmodulin ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chrNW_004936488:17,580,425...17,588,480 JBrowse link
G LOC101973578 adenosine receptor A3 ISO PMID:8987783 SynGO PMID:8987783 RGD:13702310 NCBI chrNW_004936690:152,777...168,411 JBrowse link
G Lrrk2 leucine rich repeat kinase 2 ISO (PMID:23949442) ParkinsonsUK-UCL PMID:23949442 NCBI chrNW_004936607:628,469...761,117 JBrowse link
G Myo6 myosin VI ISO (MGI:MGI:3654775|PMID:16819522) SynGO PMID:16819522 MGI:MGI:3654775 NCBI chrNW_004936788:1,125,332...1,264,372 JBrowse link
G Nr3c2 nuclear receptor subfamily 3 group C member 2 ISO (MGI:MGI:3798112|PMID:18547242) SynGO PMID:18547242 MGI:MGI:3798112 NCBI chrNW_004936535:1,139,687...1,467,469 JBrowse link
G Nrn1 neuritin 1 ISO (MGI:MGI:5908484|PMID:28475719) SynGO PMID:28475719 MGI:MGI:5908484 NCBI chrNW_004936534:6,459,431...6,464,253 JBrowse link
G Nrxn3 neurexin 3 ISO (MGI:MGI:5662329|PMID:26030848) SynGO PMID:26030848 MGI:MGI:5662329 NCBI chrNW_004936488:6,920,133...8,466,316 JBrowse link
G P2rx1 purinergic receptor P2X 1 ISO PMID:16000618 SynGO PMID:16000618 RGD:1581702 NCBI chrNW_004936677:530,338...546,742 JBrowse link
G P2rx2 purinergic receptor P2X 2 ISO PMID:16000618 SynGO PMID:16000618 RGD:1581702 NCBI chrNW_004936660:2,570,627...2,574,081 JBrowse link
G P2ry1 purinergic receptor P2Y1 ISO PMID:16000618 SynGO PMID:16000618 RGD:1581702 NCBI chrNW_004936519:865,756...872,466 JBrowse link
G P2ry2 purinergic receptor P2Y2 ISO PMID:16000618 SynGO PMID:16000618 RGD:1581702 NCBI chrNW_004936498:2,432,436...2,444,495 JBrowse link
G P2ry4 pyrimidinergic receptor P2Y4 ISO PMID:16000618 SynGO PMID:16000618 RGD:1581702 NCBI chrNW_004936762:1,217,858...1,218,948 JBrowse link
G Pfn2 profilin 2 ISO (MGI:MGI:3714870|PMID:17541406) SynGO
MGI
PMID:17541406 MGI:MGI:3714870 NCBI chrNW_004936727:1,992,508...1,993,271 JBrowse link
G Ppfia2 PTPRF interacting protein alpha 2 ISO PMID:23751498 SynGO PMID:23751498 RGD:13702233 NCBI chrNW_004936698:2,090,768...2,531,366 JBrowse link
G Prepl prolyl endopeptidase like ISO (PMID:24610330) UniProtKB PMID:24610330 NCBI chrNW_004936508:7,637,844...7,674,232 JBrowse link
G Prkca protein kinase C alpha ISO (MGI:MGI:5141567|PMID:21658591) SynGO PMID:21658591 MGI:MGI:5141567 NCBI chrNW_004936541:6,231,604...6,488,201 JBrowse link
G Prkcb protein kinase C beta ISO (MGI:MGI:5141567|PMID:21658591) MGI PMID:21658591 MGI:MGI:5141567 NCBI chrNW_004936501:8,410,273...8,729,238 JBrowse link
G Prkce protein kinase C epsilon ISO PMID:26625935 SynGO PMID:26625935 RGD:11353024 NCBI chrNW_004936508:6,018,374...6,495,216 JBrowse link
G Prkcg protein kinase C gamma ISO (MGI:MGI:5637456|PMID:24794094) SynGO PMID:24794094 MGI:MGI:5637456 NCBI chrNW_004936994:87,525...105,125 JBrowse link
G Rab3a RAB3A, member RAS oncogene family ISO PMID:28057568 UniProt PMID:28057568 RGD:14390053 NCBI chrNW_004936596:2,990,367...2,995,935 JBrowse link
G Rab5a RAB5A, member RAS oncogene family ISO (PMID:16141272) ParkinsonsUK-UCL PMID:16141272 NCBI chrNW_004936473:12,238,226...12,267,339 JBrowse link
G Rims3 regulating synaptic membrane exocytosis 3 ISO PMID:20452978 MGI PMID:20452978 RGD:8554325 NCBI chrNW_004936474:22,311,946...22,353,017 JBrowse link
G Rims4 regulating synaptic membrane exocytosis 4 ISO PMID:20452978 MGI PMID:20452978 RGD:8554325 NCBI chrNW_004936514:7,923,019...7,977,193 JBrowse link
G Snapin SNAP associated protein ISO (MGI:MGI:4430710|PMID:19217378) SynGO PMID:19217378 MGI:MGI:4430710 NCBI chrNW_004936580:3,449,585...3,464,709 JBrowse link
G Stxbp5 syntaxin binding protein 5 ISO (MGI:MGI:3814264|PMID:18936251) SynGO PMID:18936251 MGI:MGI:3814264 NCBI chrNW_004936489:449,029...771,870 JBrowse link
G Stxbp5l syntaxin binding protein 5 like ISO (MGI:MGI:6189626|PMID:24744148) SynGO PMID:24744148 MGI:MGI:6189626 NCBI chrNW_004936536:7,563,585...7,885,908 JBrowse link
G Syp synaptophysin ISO (MGI:MGI:1349221|PMID:10595519) SynGO PMID:10595519 MGI:MGI:1349221 NCBI chrNW_004936721:1,062,206...1,075,935 JBrowse link
G Syt1 synaptotagmin 1 ISO PMID:28057568 UniProt PMID:28057568 RGD:14390053 NCBI chrNW_004936698:65,210...575,538 JBrowse link
G Vps18 VPS18 core subunit of CORVET and HOPS complexes ISO (PMID:17027648) SynGO PMID:17027648 NCBI chrNW_004936471:4,289,487...4,297,634 JBrowse link
G Wnt7a Wnt family member 7A ISO (MGI:MGI:5699934|PMID:26400647) SynGO PMID:26400647 MGI:MGI:5699934 NCBI chrNW_004936898:45,903...70,313 JBrowse link
regulation of synaptic vesicle fusion to presynaptic active zone membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cplx1 complexin 1 ISO (MGI:MGI:2679622|PMID:11163241) SynGO PMID:11163241 MGI:MGI:2679622 NCBI chrNW_004936477:22,315,827...22,338,488 JBrowse link
G Cplx2 complexin 2 ISO (MGI:MGI:2679622|PMID:11163241) SynGO PMID:11163241 MGI:MGI:2679622 NCBI chrNW_004936597:276,540...356,822 JBrowse link
G Cplx3 complexin 3 ISO (MGI:MGI:5818105|PMID:27239031) SynGO PMID:27239031 MGI:MGI:5818105 NCBI chrNW_004936471:33,798,523...33,803,045 JBrowse link
G Grik5 glutamate ionotropic receptor kainate type subunit 5 ISO (MGI:MGI:2449894|PMID:12533602) MGI PMID:12533602 MGI:MGI:2449894 NCBI chrNW_004936706:410,806...469,000 JBrowse link
G Rab3a RAB3A, member RAS oncogene family ISO (MGI:MGI:3762126|PMID:11359932)
(MGI:MGI:3653150|PMID:9194562)
MGI
ParkinsonsUK-UCL
PMID:9194562, PMID:11359932 MGI:MGI:3653150, MGI:MGI:3762126 NCBI chrNW_004936596:2,990,367...2,995,935 JBrowse link
regulation of synaptic vesicle priming term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Napa NSF attachment protein alpha ISO (MGI:MGI:4879076|PMID:21040848) MGI
SynGO
PMID:21040848 MGI:MGI:4879076 NCBI chrNW_004936664:1,155,557...1,178,626 JBrowse link
G Napb NSF attachment protein beta ISO (MGI:MGI:4879076|PMID:21040848) MGI
SynGO
PMID:21040848 MGI:MGI:4879076 NCBI chrNW_004936620:2,158,246...2,205,624 JBrowse link
G Rab3a RAB3A, member RAS oncogene family ISO PMID:21689256 UniProt PMID:21689256 RGD:14390056 NCBI chrNW_004936596:2,990,367...2,995,935 JBrowse link
G Stx1a syntaxin 1A ISO (MGI:MGI:5521403|PMID:24133272) ParkinsonsUK-UCL PMID:24133272 MGI:MGI:5521403 NCBI chrNW_004936543:2,909,560...2,918,175 JBrowse link
G Stx1b syntaxin 1B ISO (MGI:MGI:5521403|PMID:24133272) ParkinsonsUK-UCL PMID:24133272 MGI:MGI:5521403 NCBI chrNW_004936501:13,370,678...13,378,933 JBrowse link
G Stxbp1 syntaxin binding protein 1 ISO PMID:21689256 UniProt
RGD
PMID:19255244, PMID:21689256 RGD:14390056, RGD:2311128 NCBI chrNW_004936487:15,300,758...15,367,475 JBrowse link
G Stxbp5 syntaxin binding protein 5 ISO (MGI:MGI:3814264|PMID:18936251) SynGO PMID:18936251 MGI:MGI:3814264 NCBI chrNW_004936489:449,029...771,870 JBrowse link
G Unc13a unc-13 homolog A ISO PMID:21689256 UniProt PMID:21689256 RGD:14390056 NCBI chrNW_004936596:3,311,358...3,370,833 JBrowse link
regulation of synaptic vesicle recycling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf14 fibroblast growth factor 14 ISO PMID:23831029 MGI PMID:23831029 RGD:10047342 NCBI chrNW_004936472:8,601,968...9,233,704 JBrowse link
G Vamp2 vesicle associated membrane protein 2 ISO RGD PMID:21808019 RGD:13506237 NCBI chrNW_004936595:1,385,692...1,389,484 JBrowse link
spontaneous exocytosis of neurotransmitter term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prkaca protein kinase cAMP-activated catalytic subunit alpha ISO PMID:17190793 UniProt PMID:17190793 RGD:10047304 NCBI chrNW_004936659:2,750,015...2,765,914 JBrowse link
G Syt12 synaptotagmin 12 ISO PMID:17190793 GO_Central PMID:17190793 RGD:10047304 NCBI chrNW_004936599:2,617,083...2,637,355 JBrowse link
synaptic vesicle budding from endosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap1s2 adaptor related protein complex 1 subunit sigma 2 ISO (MGI:MGI:5617942|PMID:20203623) SynGO PMID:20203623 MGI:MGI:5617942 NCBI chrNW_004936470:5,260,984...5,301,552 JBrowse link
G Ap3b1 adaptor related protein complex 3 subunit beta 1 ISO (MGI:MGI:6189637|PMID:11588176) SynGO PMID:11588176 MGI:MGI:6189637 NCBI chrNW_004936549:5,964,240...6,205,245 JBrowse link
G Ap3d1 adaptor related protein complex 3 subunit delta 1 ISO (MGI:MGI:6189637|PMID:11588176)
PMID:22539861
SynGO PMID:11588176, PMID:22539861 MGI:MGI:6189637, RGD:12050120 NCBI chrNW_004936588:1,223,646...1,262,577 JBrowse link
synaptic vesicle budding from presynaptic endocytic zone membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnm1 dynamin 1 ISO (MGI:MGI:5285027|PMID:21689597) SynGO PMID:21689597 MGI:MGI:5285027 NCBI chrNW_004936487:15,767,897...15,797,722 JBrowse link
G Dnm3 dynamin 3 ISO (MGI:MGI:5285027|PMID:21689597) SynGO PMID:21689597 MGI:MGI:5285027 NCBI chrNW_004936481:14,971,977...15,411,253 JBrowse link
G Snap91 synaptosome associated protein 91 ISO (MGI:MGI:5707086|PMID:26412491) SynGO PMID:26412491 MGI:MGI:5707086 NCBI chrNW_004936510:7,222,200...7,345,138 JBrowse link
synaptic vesicle clustering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnnb1 catenin beta 1 ISO (MGI:MGI:2680876|PMID:14622577) MGI PMID:14622577 MGI:MGI:2680876 NCBI chrNW_004936473:29,999,542...30,034,610 JBrowse link
G Nlgn1 neuroligin 1 ISO PMID:20534458
PMID:19628693
(MGI:MGI:2665153|PMID:12796785), (MGI:MGI:3694190|PMID:10892652)
BHF-UCL PMID:10892652, PMID:12796785, PMID:19628693, PMID:20534458 MGI:MGI:2665153, MGI:MGI:3694190, RGD:10047242, RGD:8554760 NCBI chrNW_004936703:951,935...1,415,991 JBrowse link
G Nrxn1 neurexin 1 ISO (MGI:MGI:2665153|PMID:12796785) BHF-UCL PMID:12796785 MGI:MGI:2665153 NCBI chrNW_004936508:1,889,640...2,954,039 JBrowse link
G Pclo piccolo presynaptic cytomatrix protein ISO (MGI:MGI:4442284|PMID:20332206) SynGO PMID:20332206 MGI:MGI:4442284 NCBI chrNW_004936734:1,273,055...1,674,913 JBrowse link
G Rab3a RAB3A, member RAS oncogene family ISO (MGI:MGI:4830800|PMID:20338242) UniProt PMID:20338242 MGI:MGI:4830800 NCBI chrNW_004936596:2,990,367...2,995,935 JBrowse link
G Syn1 synapsin I ISO (MGI:MGI:76610|PMID:7568108) SynGO PMID:7568108 MGI:MGI:76610 NCBI chrNW_004936502:13,334,998...13,387,082 JBrowse link
G Syn2 synapsin II ISO (MGI:MGI:3831450|PMID:18945891)
(MGI:MGI:3831450|PMID:18945891), (MGI:MGI:4830800|PMID:20338242)
SynGO
UniProt
PMID:18945891, PMID:20338242 MGI:MGI:3831450, MGI:MGI:4830800 NCBI chrNW_004936602:1,460,602...1,506,509 JBrowse link
G Syn3 synapsin III ISO (MGI:MGI:2180939|PMID:12040043) SynGO PMID:12040043 MGI:MGI:2180939 NCBI chrNW_004936492:6,836,441...7,253,867 JBrowse link
G Syndig1 synapse differentiation inducing 1 ISO PMID:20152115 UniProt PMID:20152115 RGD:8554654 NCBI chrNW_004936620:1,165,312...1,359,127 JBrowse link
synaptic vesicle docking term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctbp2 C-terminal binding protein 2 ISO (MGI:MGI:5784793|PMID:26929012) MGI PMID:26929012 MGI:MGI:5784793 NCBI chrNW_004936486:13,173,280...13,261,257 JBrowse link
G LOC101974478 protein unc-13 homolog B ISO (MGI:MGI:4354715|PMID:19558619) MGI PMID:19558619 MGI:MGI:4354715 NCBI chrNW_004936524:3,320,859...3,369,865 JBrowse link
G Ppfia3 PTPRF interacting protein alpha 3 ISO (MGI:MGI:6120581|PMID:29439199) SynGO PMID:29439199 MGI:MGI:6120581 NCBI chrNW_004936664:3,063,607...3,088,031 JBrowse link
G Rims1 regulating synaptic membrane exocytosis 1 ISO (MGI:MGI:4939085|PMID:21241895) SynGO PMID:21241895 MGI:MGI:4939085 NCBI chrNW_004936618:3,678,400...4,047,994 JBrowse link
G Rims2 regulating synaptic membrane exocytosis 2 ISO (MGI:MGI:4939085|PMID:21241895) SynGO PMID:21241895 MGI:MGI:4939085 NCBI chrNW_004936470:39,725,092...40,270,268 JBrowse link
G Stx1a syntaxin 1A ISO PMID:1321498 UniProt PMID:1321498 RGD:8553325 NCBI chrNW_004936543:2,909,560...2,918,175 JBrowse link
G Stx1b syntaxin 1B ISO (MGI:MGI:5603022|PMID:24587181)
(MGI:MGI:5521403|PMID:24133272)
ParkinsonsUK-UCL PMID:24133272, PMID:24587181 MGI:MGI:5521403, MGI:MGI:5603022 NCBI chrNW_004936501:13,370,678...13,378,933 JBrowse link
G Stx4 syntaxin 4 ISO RGD PMID:7690687 RGD:68313 NCBI chrNW_004936501:13,401,095...13,408,316 JBrowse link
G Syde1 synapse defective Rho GTPase homolog 1 ISO (MGI:MGI:5515279|PMID:23791195) MGI PMID:23791195 MGI:MGI:5515279 NCBI chrNW_004936596:5,352,813...5,359,561 JBrowse link
G Unc13a unc-13 homolog A ISO (MGI:MGI:4354715|PMID:19558619) MGI PMID:19558619 MGI:MGI:4354715 NCBI chrNW_004936596:3,311,358...3,370,833 JBrowse link
G Vamp2 vesicle associated membrane protein 2 ISO (MGI:MGI:5617001|PMID:25374362) SynGO PMID:25374362 MGI:MGI:5617001 NCBI chrNW_004936595:1,385,692...1,389,484 JBrowse link
synaptic vesicle endocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actb actin beta ISO (MGI:MGI:6189485|PMID:27840001) SynGO PMID:27840001 MGI:MGI:6189485 NCBI chrNW_004936765:667,107...670,627 JBrowse link
G Actg1 actin gamma 1 ISO (MGI:MGI:6189485|PMID:27840001) SynGO PMID:27840001 MGI:MGI:6189485 NCBI chrNW_004936594:5,170,711...5,173,251 JBrowse link
G Amph amphiphysin ISO (MGI:MGI:2176305|PMID:11879655) SynGO
MGI
PMID:11879655 MGI:MGI:2176305 NCBI chrNW_004936478:13,959,669...14,183,835 JBrowse link
G Ap2b1 adaptor related protein complex 2 subunit beta 1 ISO (PMID:11102472) SynGO PMID:11102472 NCBI chrNW_004936490:5,156...127,666 JBrowse link
G Ap2m1 adaptor related protein complex 2 subunit mu 1 ISO PMID:19321783 SynGO PMID:19321783 RGD:12050109 NCBI chrNW_004936578:5,680,748...5,691,666 JBrowse link
G Arf6 ADP ribosylation factor 6 ISO PMID:26731518 SynGO PMID:26731518 RGD:11556875 NCBI chrNW_004936583:181,490...185,466 JBrowse link
G Bin1 bridging integrator 1 ISO PMID:9348539 SynGO PMID:9348539 RGD:631926 NCBI chrNW_004936469:44,128,308...44,185,739 JBrowse link
G Canx calnexin ISO (MGI:MGI:5288282|PMID:21747946) SynGO PMID:21747946 MGI:MGI:5288282 NCBI chrNW_004936739:1,051,853...1,085,658 JBrowse link
G Cdk5 cyclin dependent kinase 5 ISO RGD PMID:12855954 RGD:1358501 NCBI chrNW_004936527:6,478,934...6,483,848 JBrowse link
G Cltc clathrin heavy chain ISO PMID:16982422 SynGO PMID:16982422 RGD:13702168 NCBI chrNW_004936490:3,659,682...3,726,222 JBrowse link
G Dennd1a DENN domain containing 1A ISO (MGI:MGI:3694831|PMID:17182770) MGI PMID:17182770 MGI:MGI:3694831 NCBI chrNW_004936487:11,815,040...12,332,603 JBrowse link
G Dnm1 dynamin 1 ISO (MGI:MGI:3709249|PMID:17463283) SynGO PMID:17463283 MGI:MGI:3709249 NCBI chrNW_004936487:15,767,897...15,797,722 JBrowse link
G Dnm1l dynamin 1 like ISO PMID:23792689 SynGO PMID:23792689 RGD:12793033 NCBI chrNW_004936607:3,576,357...3,632,423 JBrowse link
G Dnm2 dynamin 2 ISO (MGI:MGI:5285027|PMID:21689597) SynGO PMID:21689597 MGI:MGI:5285027 NCBI chrNW_004936659:957,408...1,046,393 JBrowse link
G Dnm3 dynamin 3 ISO (MGI:MGI:5285027|PMID:21689597) MGI PMID:21689597 MGI:MGI:5285027 NCBI chrNW_004936481:14,971,977...15,411,253 JBrowse link
G Fcho2 FCH and mu domain containing endocytic adaptor 2 ISO PMID:20448150
(MGI:MGI:5320276|PMID:20448150)
SynGO
ParkinsonsUK-UCL
PMID:20448150 MGI:MGI:5320276, RGD:12050101 NCBI chrNW_004936549:3,455,172...3,565,507 JBrowse link
G Grn granulin precursor ISO RGD PMID:21813674 RGD:5509044 NCBI chrNW_004936541:793,548...800,271 JBrowse link
G Itsn1 intersectin 1 ISO (MGI:MGI:3811659|PMID:18676989) MGI PMID:18676989 MGI:MGI:3811659 NCBI chrNW_004936500:8,490,514...8,678,127 JBrowse link
G LOC101968601 signal transducer CD24 ISO (MGI:MGI:3625625|PMID:16606832) MGI PMID:16606832 MGI:MGI:3625625 NCBI chrNW_004936491:16,706,745...16,707,010 JBrowse link
G LOC101977674 oligophrenin-1 ISO (MGI:MGI:4359148|PMID:19481455) MGI PMID:19481455 MGI:MGI:4359148 NCBI chrNW_004936635:6,966...243,209 JBrowse link
G Pacsin1 protein kinase C and casein kinase substrate in neurons 1 ISO (MGI:MGI:5304995|PMID:21926968) UniProtKB PMID:21926968 MGI:MGI:5304995 NCBI chrNW_004936476:24,574,106...24,622,494 JBrowse link
G Picalm phosphatidylinositol binding clathrin assembly protein ISO PMID:21808019 SynGO PMID:21808019 RGD:13506237 NCBI chrNW_004936498:13,785,638...13,885,931 JBrowse link
G Rab27b RAB27B, member RAS oncogene family ISO PMID:20926670 SynGO PMID:20926670 RGD:13432355 NCBI chrNW_004936497:9,039,552...9,176,182 JBrowse link
G Scrib scribble planar cell polarity protein ISO (MGI:MGI:4365512|PMID:19458197) SynGO PMID:19458197 MGI:MGI:4365512 NCBI chrNW_004936470:8,349,175...8,370,099 JBrowse link
G Snap91 synaptosome associated protein 91 ISO PMID:21808019 SynGO PMID:21808019 RGD:13506237 NCBI chrNW_004936510:7,222,200...7,345,138 JBrowse link
G Snca synuclein alpha ISO (MGI:MGI:5605098|PMID:25009269)
(MGI:MGI:3850310|PMID:18980610), (MGI:MGI:5605098|PMID:25009269)
SynGO PMID:18980610, PMID:25009269 MGI:MGI:3850310, MGI:MGI:5605098 NCBI chrNW_004936685:2,077,017...2,175,298 JBrowse link
G Sncb synuclein beta ISO (MGI:MGI:5605098|PMID:25009269) SynGO PMID:25009269 MGI:MGI:5605098 NCBI chrNW_004936597:878,270...888,346 JBrowse link
G Ston2 stonin 2 ISO PMID:22727701
(PMID:21102408)
SynGO
UniProtKB
PMID:21102408, PMID:22727701 RGD:12050122 NCBI chrNW_004936488:9,689,595...9,816,672 JBrowse link
G Stx1a syntaxin 1A ISO (PMID:26635000) UniProt PMID:26635000 NCBI chrNW_004936543:2,909,560...2,918,175 JBrowse link
G Synj1 synaptojanin 1 ISO (MGI:MGI:3797309|PMID:18093523)
(PMID:18093523)
MGI
ParkinsonsUK-UCL
PMID:18093523 MGI:MGI:3797309 NCBI chrNW_004936500:9,484,571...9,565,980 JBrowse link
G Syp synaptophysin ISO (MGI:MGI:5141572|PMID:21658579) SynGO PMID:21658579 MGI:MGI:5141572 NCBI chrNW_004936721:1,062,206...1,075,935 JBrowse link
G Tbc1d24 TBC1 domain family member 24 ISO (MGI:MGI:6279048|PMID:30335140) MGI PMID:30335140 MGI:MGI:6279048 NCBI chrNW_004936694:1,556,717...1,582,019 JBrowse link
G Vamp2 vesicle associated membrane protein 2 ISO (MGI:MGI:3573806|PMID:15475946) UniProt PMID:15475946 MGI:MGI:3573806 NCBI chrNW_004936595:1,385,692...1,389,484 JBrowse link
synaptic vesicle exocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cplx1 complexin 1 ISO (MGI:MGI:3688343|PMID:15126625) RGD
UniProtKB
PMID:11751907, PMID:15126625 MGI:MGI:3688343, RGD:727333 NCBI chrNW_004936477:22,315,827...22,338,488 JBrowse link
G Cplx2 complexin 2 ISO RGD PMID:11751907 RGD:727333 NCBI chrNW_004936597:276,540...356,822 JBrowse link
G Cplx3 complexin 3 ISO (MGI:MGI:3582382|PMID:15911881) UniProtKB PMID:15911881 MGI:MGI:3582382 NCBI chrNW_004936471:33,798,523...33,803,045 JBrowse link
G Doc2a double C2 domain alpha ISO RGD PMID:10651871 RGD:1357914 NCBI chrNW_004936501:12,458,537...12,463,857 JBrowse link
G LOC101974478 protein unc-13 homolog B ISO (MGI:MGI:5795822|PMID:19700493) SynGO PMID:19700493 MGI:MGI:5795822 NCBI chrNW_004936524:3,320,859...3,369,865 JBrowse link
G Otof otoferlin ISO (MGI:MGI:3692845|PMID:17055430)
(MGI:MGI:5660467|PMID:25609709)
(MGI:MGI:3774237|PMID:18287496)
UniProtKB
MGI
PMID:17055430, PMID:18287496, PMID:25609709 MGI:MGI:3692845, MGI:MGI:3774237, MGI:MGI:5660467 NCBI chrNW_004936493:5,916,113...5,999,867 JBrowse link
G P2rx7 purinergic receptor P2X 7 ISO (MGI:MGI:3529714|PMID:15713258) MGI PMID:15713258 MGI:MGI:3529714 NCBI chrNW_004936558:3,106,819...3,149,689 JBrowse link
G Ppfia3 PTPRF interacting protein alpha 3 ISO (MGI:MGI:6120581|PMID:29439199) SynGO PMID:29439199 MGI:MGI:6120581 NCBI chrNW_004936664:3,063,607...3,088,031 JBrowse link
G Rab3a RAB3A, member RAS oncogene family ISO PMID:16141272
(MGI:MGI:3762126|PMID:11359932)
ParkinsonsUK-UCL
MGI
PMID:11359932, PMID:16141272 MGI:MGI:3762126, RGD:8693376 NCBI chrNW_004936596:2,990,367...2,995,935 JBrowse link
G Snap25 synaptosome associated protein 25 ISO (MGI:MGI:6189328|PMID:17728451)
PMID:8103915
SynGO PMID:8103915, PMID:17728451 MGI:MGI:6189328, RGD:13702457 NCBI chrNW_004936485:9,198,744...9,279,854 JBrowse link
G Snapin SNAP associated protein ISO (PMID:10195194) MGI PMID:10195194 NCBI chrNW_004936580:3,449,585...3,464,709 JBrowse link
G Snca synuclein alpha ISO (PMID:28288128) UniProt PMID:28288128 NCBI chrNW_004936685:2,077,017...2,175,298 JBrowse link
G Sptbn2 spectrin beta, non-erythrocytic 2 ISO PMID:9826670 UniProt PMID:9826670 RGD:8553838 NCBI chrNW_004936599:2,890,404...2,928,502 JBrowse link
G Stx1a syntaxin 1A ISO PMID:7901002
(MGI:MGI:5790510|PMID:27466336)
(PMID:26635000)
SynGO
UniProt
PMID:7901002, PMID:26635000, PMID:27466336 MGI:MGI:5790510, RGD:13702440 NCBI chrNW_004936543:2,909,560...2,918,175 JBrowse link
G Stx1b syntaxin 1B ISO (MGI:MGI:5790510|PMID:27466336) SynGO PMID:27466336 MGI:MGI:5790510 NCBI chrNW_004936501:13,370,678...13,378,933 JBrowse link
G Syt1 synaptotagmin 1 ISO (MGI:MGI:4879076|PMID:21040848) MGI PMID:21040848 MGI:MGI:4879076 NCBI chrNW_004936698:65,210...575,538 JBrowse link
G Syt10 synaptotagmin 10 NOT ISO (MGI:MGI:5751674|PMID:21496647) UniProtKB PMID:21496647 MGI:MGI:5751674 NCBI chrNW_004936607:2,940,607...2,995,178 JBrowse link
G Trim9 tripartite motif containing 9 ISO RGD PMID:11524423 RGD:631246 NCBI chrNW_004936495:14,561,765...14,666,043 JBrowse link
G Unc13a unc-13 homolog A ISO (MGI:MGI:1341485|PMID:10440375) SynGO PMID:10440375 MGI:MGI:1341485 NCBI chrNW_004936596:3,311,358...3,370,833 JBrowse link
G Unc13c unc-13 homolog C ISO (MGI:MGI:1929572|PMID:11150314) SynGO PMID:11150314 MGI:MGI:1929572 NCBI chrNW_004936471:15,691,357...16,225,590 JBrowse link
G Vamp2 vesicle associated membrane protein 2 ISO (MGI:MGI:3573806|PMID:15475946)
PMID:1331807
(MGI:MGI:2153431|PMID:11691998)
UniProt
SynGO
MGI
PMID:1331807, PMID:11691998, PMID:15475946 MGI:MGI:2153431, MGI:MGI:3573806, RGD:13702243 NCBI chrNW_004936595:1,385,692...1,389,484 JBrowse link
synaptic vesicle fusion to presynaptic active zone membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prrt2 proline rich transmembrane protein 2 ISO (MGI:MGI:5792766|PMID:27052163) UniProtKB PMID:27052163 MGI:MGI:5792766 NCBI chrNW_004936501:12,660,181...12,663,788 JBrowse link
G Snapin SNAP associated protein ISO (MGI:MGI:4430710|PMID:19217378) MGI PMID:19217378 MGI:MGI:4430710 NCBI chrNW_004936580:3,449,585...3,464,709 JBrowse link
G Stx1a syntaxin 1A ISO PMID:18703708 SynGO PMID:18703708 RGD:11535099 NCBI chrNW_004936543:2,909,560...2,918,175 JBrowse link
G Stx1b syntaxin 1B ISO (MGI:MGI:5603022|PMID:24587181)
(MGI:MGI:3803800|PMID:18703708), (MGI:MGI:5603022|PMID:24587181)
SynGO PMID:18703708, PMID:24587181 MGI:MGI:3803800, MGI:MGI:5603022 NCBI chrNW_004936501:13,370,678...13,378,933 JBrowse link
synaptic vesicle lumen acidification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clcn3 chloride voltage-gated channel 3 ISO (MGI:MGI:2182197|PMID:11182090)
(MGI:MGI:5006894|PMID:21378974)
SynGO
MGI
PMID:11182090, PMID:21378974 MGI:MGI:2182197, MGI:MGI:5006894 NCBI chrNW_004936516:1,678,610...1,760,099 JBrowse link
G Slc17a7 solute carrier family 17 member 7 ISO (MGI:MGI:3836822|PMID:19169251) MGI PMID:19169251 MGI:MGI:3836822 NCBI chrNW_004936664:3,307,562...3,318,184 JBrowse link
synaptic vesicle priming term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cadps calcium dependent secretion activator ISO (MGI:MGI:3773298|PMID:18022372)
(MGI:MGI:4879076|PMID:21040848)
(MGI:MGI:5617001|PMID:25374362)
SynGO
MGI
PMID:18022372, PMID:21040848, PMID:25374362 MGI:MGI:3773298, MGI:MGI:4879076, MGI:MGI:5617001 NCBI chrNW_004936637:3,543,615...4,023,710 JBrowse link
G Cadps2 calcium dependent secretion activator 2 ISO (MGI:MGI:6189303|PMID:25437547)
(MGI:MGI:4879076|PMID:21040848)
(MGI:MGI:5617001|PMID:25374362)
SynGO
MGI
PMID:21040848, PMID:25374362, PMID:25437547 MGI:MGI:4879076, MGI:MGI:5617001, MGI:MGI:6189303 NCBI chrNW_004936605:2,505,064...3,012,322 JBrowse link
G Erc1 ELKS/RAB6-interacting/CAST family member 1 ISO (MGI:MGI:5882646|PMID:27253063) SynGO PMID:27253063 MGI:MGI:5882646 NCBI chrNW_004936606:1,201,420...1,713,894 JBrowse link
G LOC101960052 ERC protein 2 ISO (MGI:MGI:4415657|PMID:19874790) SynGO PMID:19874790 MGI:MGI:4415657 NCBI chrNW_004936473:6,075,811...6,532,671 JBrowse link
G LOC101974478 protein unc-13 homolog B ISO PMID:22966208
(MGI:MGI:2181453|PMID:12070347)
(MGI:MGI:5617001|PMID:25374362)
(MGI:MGI:2158113|PMID:11832228)
ParkinsonsUK-UCL
MGI
SynGO
PMID:11832228, PMID:12070347, PMID:22966208, PMID:25374362 MGI:MGI:2158113, MGI:MGI:2181453, MGI:MGI:5617001, RGD:11535109 NCBI chrNW_004936524:3,320,859...3,369,865 JBrowse link
G Napa NSF attachment protein alpha ISO (MGI:MGI:4879076|PMID:21040848) MGI PMID:21040848 MGI:MGI:4879076 NCBI chrNW_004936664:1,155,557...1,178,626 JBrowse link
G Otof otoferlin ISO (MGI:MGI:4461353|PMID:20562868) CACAO PMID:20562868 MGI:MGI:4461353 NCBI chrNW_004936493:5,916,113...5,999,867 JBrowse link
G Rims1 regulating synaptic membrane exocytosis 1 ISO (MGI:MGI:4887275|PMID:21262469)
(MGI:MGI:4887275|PMID:21262469), (MGI:MGI:5432438|PMID:22753485)
SynGO PMID:21262469, PMID:22753485 MGI:MGI:4887275, MGI:MGI:5432438 NCBI chrNW_004936618:3,678,400...4,047,994 JBrowse link
G Rims2 regulating synaptic membrane exocytosis 2 ISO (MGI:MGI:5432438|PMID:22753485) SynGO PMID:22753485 MGI:MGI:5432438 NCBI chrNW_004936470:39,725,092...40,270,268 JBrowse link
G Snca synuclein alpha ISO (PMID:30404828) UniProt PMID:30404828 NCBI chrNW_004936685:2,077,017...2,175,298 JBrowse link
G Stxbp1 syntaxin binding protein 1 ISO (MGI:MGI:3695670|PMID:17110441) SynGO PMID:17110441 MGI:MGI:3695670 NCBI chrNW_004936487:15,300,758...15,367,475 JBrowse link
G Sv2a synaptic vesicle glycoprotein 2A ISO (MGI:MGI:3831988|PMID:19176798) SynGO PMID:19176798 MGI:MGI:3831988 NCBI chrNW_004936580:243,829...257,708 JBrowse link
G Synj1 synaptojanin 1 ISO (MGI:MGI:2447947|PMID:12481038) MGI PMID:12481038 MGI:MGI:2447947 NCBI chrNW_004936500:9,484,571...9,565,980 JBrowse link
G Unc13a unc-13 homolog A ISO (MGI:MGI:2158113|PMID:11832228)
(MGI:MGI:5617001|PMID:25374362)
ParkinsonsUK-UCL
SynGO
RGD
PMID:11832228, PMID:21499244, PMID:25374362 MGI:MGI:2158113, MGI:MGI:5617001, RGD:5686389 NCBI chrNW_004936596:3,311,358...3,370,833 JBrowse link
G Unc13c unc-13 homolog C ISO PMID:22966208 ParkinsonsUK-UCL PMID:22966208 RGD:11535109 NCBI chrNW_004936471:15,691,357...16,225,590 JBrowse link
synaptic vesicle recycling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap1s2 adaptor related protein complex 1 subunit sigma 2 ISO (MGI:MGI:5617942|PMID:20203623) MGI PMID:20203623 MGI:MGI:5617942 NCBI chrNW_004936470:5,260,984...5,301,552 JBrowse link
G Rab3a RAB3A, member RAS oncogene family ISO PMID:16141272 ParkinsonsUK-UCL PMID:16141272 RGD:8693376 NCBI chrNW_004936596:2,990,367...2,995,935 JBrowse link
G Rab5a RAB5A, member RAS oncogene family ISO (PMID:16141272) ParkinsonsUK-UCL PMID:16141272 NCBI chrNW_004936473:12,238,226...12,267,339 JBrowse link
G Syt7 synaptotagmin 7 ISO (MGI:MGI:5560382|PMID:24569478) UniProtKB PMID:24569478 MGI:MGI:5560382 NCBI chrNW_004936581:1,516,199...1,557,992 JBrowse link
synaptic vesicle recycling via endosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl2l1 BCL2 like 1 ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chrNW_004936485:18,654,046...18,707,324 JBrowse link
G Dnm1l dynamin 1 like ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chrNW_004936607:3,576,357...3,632,423 JBrowse link
synaptic vesicle targeting term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nlgn1 neuroligin 1 ISO (MGI:MGI:3694190|PMID:10892652) UniProtKB PMID:10892652 MGI:MGI:3694190 NCBI chrNW_004936703:951,935...1,415,991 JBrowse link
G Psen1 presenilin 1 ISO (MGI:MGI:2664026|PMID:12805290) MGI PMID:12805290 MGI:MGI:2664026 NCBI chrNW_004936488:2,464,623...2,528,807 JBrowse link
G Scrib scribble planar cell polarity protein ISO (MGI:MGI:4365512|PMID:19458197) UniProtKB PMID:19458197 MGI:MGI:4365512 NCBI chrNW_004936470:8,349,175...8,370,099 JBrowse link
synaptic vesicle uncoating term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnajc6 DnaJ heat shock protein family (Hsp40) member C6 ISO (MGI:MGI:4439191|PMID:20160091) SynGO PMID:20160091 MGI:MGI:4439191 NCBI chrNW_004936692:2,788,477...2,836,094 JBrowse link
G Sh3gl1 SH3 domain containing GRB2 like 1, endophilin A2 ISO (MGI:MGI:5300660|PMID:22099461) SynGO PMID:22099461 MGI:MGI:5300660 NCBI chrNW_004936588:2,504,372...2,535,993 JBrowse link
G Sh3gl3 SH3 domain containing GRB2 like 3, endophilin A3 ISO (MGI:MGI:5300660|PMID:22099461) SynGO PMID:22099461 MGI:MGI:5300660 NCBI chrNW_004936483:18,051,023...18,176,514 JBrowse link
G Synj1 synaptojanin 1 ISO (MGI:MGI:1346710|PMID:10535736)
(MGI:MGI:2447947|PMID:12481038)
(MGI:MGI:1346710|PMID:10535736), (MGI:MGI:5300660|PMID:22099461)
SynGO
MGI
PMID:10535736, PMID:12481038, PMID:22099461 MGI:MGI:1346710, MGI:MGI:2447947, MGI:MGI:5300660 NCBI chrNW_004936500:9,484,571...9,565,980 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12001
    localization 4781
      establishment of localization 3430
        establishment of localization in cell 1652
          synaptic vesicle cycle 210
            neurotransmitter loading into synaptic vesicle + 9
            regulation of synaptic vesicle cycle + 12
            synaptic vesicle clustering + 18
            synaptic vesicle exocytosis + 129
            synaptic vesicle lumen acidification + 2
            synaptic vesicle recycling + 66
Path 2
Term Annotations click to browse term
  biological_process 12001
    localization 4781
      establishment of localization 3430
        transport 3278
          vesicle-mediated transport 1116
            vesicle-mediated transport in synapse 242
              synaptic vesicle cycle 210
                neurotransmitter loading into synaptic vesicle + 9
                regulation of synaptic vesicle cycle + 12
                synaptic vesicle clustering + 18
                synaptic vesicle exocytosis + 129
                synaptic vesicle lumen acidification + 2
                synaptic vesicle recycling + 66
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.