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ONTOLOGY REPORT - ANNOTATIONS


Term:synaptic vesicle transport along microtubule
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Accession:GO:0099517 term browser browse the term
Definition:The directed movement of synaptic vesicles along microtubules within a cell, powered by molecular motors.


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anterograde synaptic vesicle transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap3b1 adaptor related protein complex 3 subunit beta 1 ISO
IBA
(MGI:MGI:5437407|PMID:21998198)
PMID:21873635
RGD PMID:21998198, PMID:21873635 MGI:MGI:5437407, RGD:13792537 NCBI chr 2:24,022,815...24,227,522
Ensembl chr 2:24,024,791...24,226,224
JBrowse link
G Ap3b2 adaptor related protein complex 3 subunit beta 2 ISO
IBA
(MGI:MGI:5437407|PMID:21998198)
PMID:21873635
RGD PMID:21998198, PMID:21873635 MGI:MGI:5437407, RGD:13792537 NCBI chr 1:143,284,041...143,315,846
Ensembl chr 1:143,283,996...143,315,633
JBrowse link
G Ap3d1 adaptor related protein complex 3 subunit delta 1 ISO
IBA
(MGI:MGI:5437407|PMID:21998198)
PMID:21873635
RGD PMID:21998198, PMID:21873635 MGI:MGI:5437407, RGD:13792537 NCBI chr 7:11,838,639...11,873,992
Ensembl chr 7:11,838,639...11,873,984
JBrowse link
G Ap3m1 adaptor related protein complex 3 subunit mu 1 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(MGI:MGI:5437407|PMID:21998198)
Ensembl
UniProt
RGD
PMID:21998198 GO_REF:0000024, GO_REF:0000107, MGI:MGI:5437407 NCBI chr15:3,435,998...3,454,281
Ensembl chr15:3,436,361...3,454,279
JBrowse link
G Ap3m2 adaptor related protein complex 3 subunit mu 2 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(MGI:MGI:5437407|PMID:21998198)
Ensembl
UniProt
RGD
PMID:21998198 GO_REF:0000024, GO_REF:0000107, MGI:MGI:5437407 NCBI chr16:74,075,842...74,091,230
Ensembl chr16:74,076,812...74,091,139
JBrowse link
G Ap3s1 adaptor related protein complex 3 subunit sigma 1 ISO (MGI:MGI:5437407|PMID:21998198) RGD PMID:21998198 MGI:MGI:5437407 NCBI chr18:40,732,472...40,798,064
Ensembl chr18:40,732,480...40,797,761
JBrowse link
G Ap3s2 adaptor related protein complex 3 subunit sigma 2 ISO (MGI:MGI:5437407|PMID:21998198) RGD PMID:21998198 MGI:MGI:5437407 NCBI chr 1:141,612,961...141,655,417
Ensembl chr 1:141,612,963...141,655,894
JBrowse link
G Bloc1s1 biogenesis of lysosomal organelles complex-1, subunit 1 ISO
ISS
(MGI:MGI:5437407|PMID:21998198)
GO_REF:0000024
RGD
UniProt
PMID:21998198 GO_REF:0000024, MGI:MGI:5437407 NCBI chr 7:3,342,630...3,346,238
Ensembl chr 7:3,342,630...3,346,238
JBrowse link
G Bloc1s2 biogenesis of lysosomal organelles complex-1, subunit 2 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(MGI:MGI:5437407|PMID:21998198)
Ensembl
UniProt
RGD
PMID:21998198 GO_REF:0000024, GO_REF:0000107, MGI:MGI:5437407 NCBI chr 1:263,913,901...263,920,989
Ensembl chr 1:263,913,854...263,920,962
JBrowse link
G Bloc1s3 biogenesis of lysosomal organelles complex-1, subunit 3 ISO (MGI:MGI:5437407|PMID:21998198) RGD PMID:21998198 MGI:MGI:5437407 NCBI chr 1:80,414,766...80,417,385
Ensembl chr 1:80,415,686...80,416,273
JBrowse link
G Bloc1s4 biogenesis of lysosomal organelles complex 1 subunit 4 ISO (MGI:MGI:5437407|PMID:21998198) RGD PMID:21998198 MGI:MGI:5437407 NCBI chr14:79,013,808...79,015,108
Ensembl chr14:79,013,807...79,015,112
JBrowse link
G Bloc1s5 biogenesis of lysosomal organelles complex 1 subunit 5 ISO
ISS
(MGI:MGI:5437407|PMID:21998198)
GO_REF:0000024
RGD
UniProt
PMID:21998198 GO_REF:0000024, MGI:MGI:5437407 NCBI chr17:26,808,193...26,833,257
Ensembl chr17:26,808,330...26,833,247
JBrowse link
G Bloc1s6 biogenesis of lysosomal organelles complex 1 subunit 6 ISO
ISS
(MGI:MGI:5437407|PMID:21998198)
GO_REF:0000024
RGD
UniProt
PMID:21998198 GO_REF:0000024, MGI:MGI:5437407 NCBI chr 3:114,869,478...114,880,218
Ensembl chr 3:114,869,459...114,881,590
JBrowse link
G Dtnbp1 dystrobrevin binding protein 1 ISO
IBA
ISS
(MGI:MGI:5437407|PMID:21998198)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:21998198, PMID:21873635 GO_REF:0000024, MGI:MGI:5437407, RGD:13792537 NCBI chr17:20,090,136...20,182,332
Ensembl chr17:20,090,246...20,182,206
JBrowse link
G Madd MAP-kinase activating death domain ISO (MGI:MGI:6189386|PMID:18849981) RGD PMID:18849981 MGI:MGI:6189386 NCBI chr 3:79,960,301...80,003,023
Ensembl chr 3:79,960,301...80,003,032
JBrowse link
G Snapin SNAP-associated protein ISO
ISS
(MGI:MGI:5437407|PMID:21998198)
GO_REF:0000024
RGD
UniProt
PMID:21998198 GO_REF:0000024, MGI:MGI:5437407 NCBI chr 2:189,878,159...189,880,743
Ensembl chr 2:189,878,168...189,880,743
JBrowse link
G Trim46 tripartite motif-containing 46 ISO (MGI:MGI:5708763|PMID:26671463) RGD PMID:26671463 MGI:MGI:5708763 NCBI chr 2:188,548,608...188,561,617
Ensembl chr 2:188,548,644...188,561,360
JBrowse link
negative regulation of anterograde synaptic vesicle transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cnih2 cornichon family AMPA receptor auxiliary protein 2 IMP PMID:24094107 UniProt PMID:24094107 RGD:10400859 NCBI chr 1:220,474,485...220,480,723
Ensembl chr 1:220,474,493...220,480,132
JBrowse link
positive regulation of anterograde synaptic vesicle transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Borcs5 BLOC-1 related complex subunit 5 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:168,396,034...168,466,968
Ensembl chr 4:168,396,775...168,464,352
JBrowse link
G Map2 microtubule-associated protein 2 IMP PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chr 9:73,204,753...73,462,965
Ensembl chr 9:73,319,710...73,462,972
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20027
    localization 6496
      establishment of localization 4911
        transport 4759
          synaptic vesicle transport 50
            synaptic vesicle cytoskeletal transport 20
              synaptic vesicle transport along microtubule 20
                anterograde synaptic vesicle transport + 20
                retrograde synaptic vesicle transport 0
Path 2
Term Annotations click to browse term
  biological_process 20027
    cellular process 18798
      cellular localization 2966
        establishment of localization in cell 2177
          intracellular transport 1512
            cytoskeleton-dependent intracellular transport 200
              transport along microtubule 169
                organelle transport along microtubule 84
                  vesicle transport along microtubule 49
                    synaptic vesicle transport along microtubule 20
                      anterograde synaptic vesicle transport + 20
                      retrograde synaptic vesicle transport 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.