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ONTOLOGY REPORT - ANNOTATIONS


Term:synaptic vesicle transport along microtubule
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Accession:GO:0099517 term browser browse the term
Definition:The directed movement of synaptic vesicles along microtubules within a cell, powered by molecular motors.


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anterograde synaptic vesicle transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AP3B1 adaptor related protein complex 3 subunit beta 1 ISS
IBA
(PMID:21873635) UniProtKB
GO_Central
PMID:21873635 GO_REF:0000024 NCBI chr 3:28,481,974...28,748,095
Ensembl chr 3:28,481,038...28,751,258
JBrowse link
G AP3B2 adaptor related protein complex 3 subunit beta 2 IEA
IBA
(PMID:21873635) Ensembl
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr 3:54,509,753...54,539,520
Ensembl chr 3:54,508,627...54,539,505
JBrowse link
G AP3D1 adaptor related protein complex 3 subunit delta 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr20:56,893,479...56,932,460
Ensembl chr20:56,893,535...56,931,830
JBrowse link
G AP3M1 adaptor related protein complex 3 subunit mu 1 IEA Ensembl GO_REF:0000107 NCBI chr 4:24,521,655...24,540,232
Ensembl chr 4:24,516,758...24,540,232
JBrowse link
G AP3M2 adaptor related protein complex 3 subunit mu 2 IEA Ensembl GO_REF:0000107 NCBI chr16:23,500,988...23,518,193
Ensembl chr16:23,454,325...23,518,193
JBrowse link
G AP3S1 adaptor related protein complex 3 subunit sigma 1 IEA Ensembl GO_REF:0000107 NCBI chr11:5,543,140...5,611,322
Ensembl chr11:5,543,222...5,610,930
JBrowse link
G AP3S2 adaptor related protein complex 3 subunit sigma 2 IEA Ensembl GO_REF:0000107 NCBI chr 3:52,807,462...52,865,290
Ensembl chr 3:52,807,462...52,865,245
JBrowse link
G BLOC1S1 biogenesis of lysosomal organelles complex 1 subunit 1 ISO (MGI:5437407|PMID:21998198) UniProt PMID:21998198 MGI:5437407 NCBI chr10:116,993...120,244 JBrowse link
G BLOC1S2 biogenesis of lysosomal organelles complex 1 subunit 2 IEA Ensembl GO_REF:0000107 NCBI chr28:13,040,016...13,044,364
Ensembl chr28:13,040,573...13,044,323
JBrowse link
G BLOC1S3 biogenesis of lysosomal organelles complex 1 subunit 3 IEA Ensembl GO_REF:0000107 NCBI chr 1:110,325,351...110,328,226
Ensembl chr 1:110,326,843...110,327,442
JBrowse link
G BLOC1S4 biogenesis of lysosomal organelles complex 1 subunit 4 IEA Ensembl GO_REF:0000107 NCBI chr 3:58,822,405...58,823,770
Ensembl chr 3:58,822,482...58,823,138
JBrowse link
G BLOC1S5 biogenesis of lysosomal organelles complex 1 subunit 5 IEA Ensembl GO_REF:0000107 NCBI chr35:7,860,336...7,998,461
Ensembl chr35:7,955,923...7,998,505
JBrowse link
G BLOC1S6 biogenesis of lysosomal organelles complex 1 subunit 6 IEA Ensembl GO_REF:0000107 NCBI chr30:11,861,119...11,949,451
Ensembl chr30:11,811,339...11,937,353
JBrowse link
G DTNBP1 dystrobrevin binding protein 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr35:14,738,025...14,862,609
Ensembl chr35:14,738,029...14,864,169
JBrowse link
G MADD MAP kinase activating death domain ISO (MGI:6189386|PMID:18849981) SynGO PMID:18849981 MGI:6189386 NCBI chr18:42,290,226...42,332,237
Ensembl chr18:42,290,754...42,328,586
JBrowse link
G SNAPIN SNAP associated protein ISO (MGI:5437407|PMID:21998198) UniProt PMID:21998198 MGI:5437407 NCBI chr 7:43,410,554...43,411,929
Ensembl chr 7:43,410,998...43,412,323
JBrowse link
G TRIM46 tripartite motif containing 46 IEA Ensembl GO_REF:0000107 NCBI chr 7:42,345,506...42,354,667
Ensembl chr 7:42,345,523...42,354,557
JBrowse link
negative regulation of anterograde synaptic vesicle transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CNIH2 cornichon family AMPA receptor auxiliary protein 2 ISO PMID:24094107 UniProt PMID:24094107 RGD:10400859 NCBI chr18:51,020,263...51,026,280
Ensembl chr18:51,021,116...51,026,273
JBrowse link
positive regulation of anterograde synaptic vesicle transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BORCS5 BLOC-1 related complex subunit 5 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr27:33,839,345...33,949,056
Ensembl chr27:33,837,318...33,934,896
JBrowse link
G MAP2 microtubule associated protein 2 ISO PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chr37:17,316,899...17,611,360
Ensembl chr37:17,466,678...17,607,803
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16190
    localization 5958
      establishment of localization 4452
        transport 4303
          synaptic vesicle transport 48
            synaptic vesicle cytoskeletal transport 20
              synaptic vesicle transport along microtubule 20
                anterograde synaptic vesicle transport + 20
                retrograde synaptic vesicle transport 0
Path 2
Term Annotations click to browse term
  biological_process 16190
    cellular process 15467
      cellular localization 2814
        establishment of localization in cell 2077
          intracellular transport 1444
            cytoskeleton-dependent intracellular transport 195
              transport along microtubule 165
                organelle transport along microtubule 87
                  vesicle transport along microtubule 50
                    synaptic vesicle transport along microtubule 20
                      anterograde synaptic vesicle transport + 20
                      retrograde synaptic vesicle transport 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.