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ONTOLOGY REPORT - ANNOTATIONS


Term:synaptic vesicle transport along microtubule
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Accession:GO:0099517 term browser browse the term
Definition:The directed movement of synaptic vesicles along microtubules within a cell, powered by molecular motors.


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anterograde synaptic vesicle transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AP3B1 adaptor related protein complex 3 subunit beta 1 ISS
IBA
(PMID:21873635) UniProtKB
GO_Central
PMID:21873635 GO_REF:0000024 NCBI chr 5:78,000,522...78,294,704
Ensembl chr 5:78,000,525...78,294,755
Ensembl chr 5:78,000,525...78,294,755
JBrowse link
G AP3B2 adaptor related protein complex 3 subunit beta 2 ISS
IBA
(PMID:21873635) UniProtKB
GO_Central
PMID:21873635 GO_REF:0000024 NCBI chr15:82,659,281...82,709,875
Ensembl chr15:82,659,281...82,709,946
JBrowse link
G AP3D1 adaptor related protein complex 3 subunit delta 1 ISS
IBA
(PMID:21873635) UniProtKB
GO_Central
PMID:21873635 GO_REF:0000024 NCBI chr19:2,100,988...2,151,566
Ensembl chr19:2,100,988...2,164,468
JBrowse link
G AP3M1 adaptor related protein complex 3 subunit mu 1 ISS UniProtKB GO_REF:0000024 NCBI chr10:74,120,012...74,151,067
Ensembl chr10:74,120,255...74,151,063
JBrowse link
G AP3M2 adaptor related protein complex 3 subunit mu 2 ISS UniProtKB GO_REF:0000024 NCBI chr 8:42,153,035...42,171,183
Ensembl chr 8:42,152,946...42,171,673
JBrowse link
G AP3S1 adaptor related protein complex 3 subunit sigma 1 ISS UniProtKB GO_REF:0000024 NCBI chr 5:115,841,606...115,914,081
Ensembl chr 5:115,841,592...115,914,081
JBrowse link
G AP3S2 adaptor related protein complex 3 subunit sigma 2 ISS UniProtKB GO_REF:0000024 NCBI chr15:89,830,599...89,893,994
Ensembl chr15:89,830,599...89,894,638
JBrowse link
G BLOC1S1 biogenesis of lysosomal organelles complex 1 subunit 1 ISS UniProtKB GO_REF:0000024 NCBI chr12:55,716,034...55,719,707
Ensembl chr12:55,716,037...55,720,087
JBrowse link
G BLOC1S2 biogenesis of lysosomal organelles complex 1 subunit 2 ISS UniProtKB GO_REF:0000024 NCBI chr10:100,273,278...100,286,692
Ensembl chr10:100,273,280...100,286,680
JBrowse link
G BLOC1S3 biogenesis of lysosomal organelles complex 1 subunit 3 ISS UniProtKB GO_REF:0000024 NCBI chr19:45,178,784...45,202,715
Ensembl chr19:45,178,784...45,216,933
Ensembl chr19:45,178,784...45,216,933
JBrowse link
G BLOC1S4 biogenesis of lysosomal organelles complex 1 subunit 4 ISS UniProtKB GO_REF:0000024 NCBI chr 4:6,716,174...6,717,664
Ensembl chr 4:6,716,174...6,717,664
JBrowse link
G BLOC1S5 biogenesis of lysosomal organelles complex 1 subunit 5 ISS UniProtKB GO_REF:0000024 NCBI chr 6:8,013,567...8,064,414
Ensembl chr 6:8,013,567...8,064,396
JBrowse link
G BLOC1S6 biogenesis of lysosomal organelles complex 1 subunit 6 IEA
ISS
Ensembl
UniProtKB
GO_REF:0000024, GO_REF:0000107 NCBI chr15:45,587,123...45,609,716
Ensembl chr15:45,587,214...45,615,945
JBrowse link
G DTNBP1 dystrobrevin binding protein 1 ISS
IBA
(PMID:21873635) UniProtKB
GO_Central
PMID:21873635 GO_REF:0000024 NCBI chr 6:15,522,803...15,663,058
Ensembl chr 6:15,522,801...15,663,058
Ensembl chr 6:15,522,801...15,663,058
JBrowse link
G MADD MAP kinase activating death domain ISO (MGI:6189386|PMID:18849981) SynGO PMID:18849981 MGI:6189386 NCBI chr11:47,269,188...47,330,031
Ensembl chr11:47,269,161...47,330,031
JBrowse link
G SNAPIN SNAP associated protein ISS UniProtKB GO_REF:0000024 NCBI chr 1:153,658,654...153,661,852
Ensembl chr 1:153,658,703...153,661,852
JBrowse link
G TRIM46 tripartite motif containing 46 IEA Ensembl GO_REF:0000107 NCBI chr 1:155,173,381...155,184,971
Ensembl chr 1:155,173,787...155,184,971
JBrowse link
negative regulation of anterograde synaptic vesicle transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CNIH2 cornichon family AMPA receptor auxiliary protein 2 IEA Ensembl GO_REF:0000107 NCBI chr11:66,278,175...66,284,206
Ensembl chr11:66,278,175...66,285,301
JBrowse link
positive regulation of anterograde synaptic vesicle transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BORCS5 BLOC-1 related complex subunit 5 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:12,357,078...12,471,233
Ensembl chr12:12,357,078...12,471,233
JBrowse link
G MAP2 microtubule associated protein 2 ISS ARUK-UCL GO_REF:0000024 NCBI chr 2:209,424,047...209,734,118
Ensembl chr 2:209,424,058...209,734,118
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18672
    localization 7210
      establishment of localization 5658
        transport 5516
          synaptic vesicle transport 51
            synaptic vesicle cytoskeletal transport 20
              synaptic vesicle transport along microtubule 20
                anterograde synaptic vesicle transport + 20
                retrograde synaptic vesicle transport 0
Path 2
Term Annotations click to browse term
  biological_process 18672
    cellular process 17690
      cellular localization 3779
        establishment of localization in cell 3016
          intracellular transport 1886
            cytoskeleton-dependent intracellular transport 219
              transport along microtubule 182
                organelle transport along microtubule 93
                  vesicle transport along microtubule 53
                    synaptic vesicle transport along microtubule 20
                      anterograde synaptic vesicle transport + 20
                      retrograde synaptic vesicle transport 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.