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ONTOLOGY REPORT - ANNOTATIONS


Term:region of cytosol
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Accession:GO:0099522 term browser browse the term
Definition:Any (proper) part of the cytosol of a single cell of sufficient size to still be considered cytosol.


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postsynaptic cytosol term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07011951.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 2:177,651,241...177,653,288 JBrowse link
G AABR07033324.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr11:17,336,444...17,340,373 JBrowse link
G AABR07048992.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 5:99,031,013...99,033,107 JBrowse link
G Aldoc aldolase, fructose-bisphosphate C IDA PMID:9570792 SynGO PMID:9570792 RGD:13702209 NCBI chr10:65,586,504...65,590,093
Ensembl chr10:65,586,504...65,590,126
JBrowse link
G Baiap2 BAR/IMD domain containing adaptor protein 2 IDA PMID:15673667 SynGO PMID:15673667 RGD:9684988 NCBI chr10:109,107,326...109,187,458
Ensembl chr10:109,107,389...109,187,115
JBrowse link
G Calb1 calbindin 1 IDA PMID:15355314 SynGO PMID:15355314 RGD:13702370 NCBI chr 5:29,538,380...29,562,774
Ensembl chr 5:29,538,380...29,562,773
JBrowse link
G Camk2a calcium/calmodulin-dependent protein kinase II alpha IDA PMID:10102820
PMID:17957478
SynGO PMID:10102820, PMID:17957478 RGD:12050143, RGD:13702290 NCBI chr18:56,193,978...56,295,869
Ensembl chr18:56,193,978...56,295,869
JBrowse link
G Dag1 dystroglycan 1 IDA PMID:9446825 SynGO PMID:9446825 RGD:13702366 NCBI chr 8:116,980,501...116,993,182
Ensembl chr 8:116,980,497...116,993,193
JBrowse link
G Dbn1 drebrin 1 IEA
ISO
GO_REF:0000107
(MGI:MGI:6189372|PMID:17559090)
Ensembl
RGD
PMID:17559090 GO_REF:0000107, MGI:MGI:6189372 NCBI chr17:9,679,511...9,693,878
Ensembl chr17:9,679,628...9,693,820
JBrowse link
G Dnajb1 DnaJ heat shock protein family (Hsp40) member B1 IDA PMID:9878698 SynGO PMID:9878698 RGD:10059325 NCBI chr19:24,747,178...24,750,919
Ensembl chr19:24,747,178...24,750,919
JBrowse link
G Eif4a3 eukaryotic translation initiation factor 4A3 IDA PMID:17632064 SynGO PMID:17632064 RGD:10044262 NCBI chr10:108,415,201...108,425,195
Ensembl chr10:108,415,202...108,425,206
JBrowse link
G Eif4e eukaryotic translation initiation factor 4E IDA PMID:11756682 SynGO PMID:11756682 RGD:13702327 NCBI chr 2:243,819,616...243,853,987
Ensembl chr 2:243,820,661...243,852,631
JBrowse link
G Eif4ebp1 eukaryotic translation initiation factor 4E binding protein 1 IDA PMID:11756682 SynGO PMID:11756682 RGD:13702327 NCBI chr16:68,954,860...68,968,248
Ensembl chr16:68,954,875...68,968,248
JBrowse link
G Fbxo45 F-box protein 45 ISO (MGI:MGI:4452423|PMID:19996097) RGD PMID:19996097 MGI:MGI:4452423 NCBI chr11:71,795,977...71,811,858
Ensembl chr11:71,796,282...71,808,498
JBrowse link
G Fmr1 FMRP translational regulator 1 IDA PMID:9144248 SynGO PMID:9144248 RGD:11059594 NCBI chr  X:154,684,924...154,722,369
Ensembl chr  X:154,684,935...154,722,314
JBrowse link
G Hap1 huntingtin-associated protein 1 IDA PMID:9742138 SynGO PMID:9742138 RGD:13702459 NCBI chr10:88,257,975...88,266,210
Ensembl chr10:88,257,976...88,266,210
JBrowse link
G Hnrnpa2b1 heterogeneous nuclear ribonucleoprotein A2/B1 IDA PMID:25286195 SynGO PMID:25286195 RGD:13702460 NCBI chr 4:81,237,496...81,241,281
Ensembl chr 4:81,237,496...81,241,282
JBrowse link
G Homer1 homer scaffold protein 1 ISO (MGI:MGI:5570507|PMID:24530450) RGD PMID:24530450 MGI:MGI:5570507 NCBI chr 2:22,909,550...23,012,303
Ensembl chr 2:22,909,569...23,009,678
JBrowse link
G Hsc70-ps1 heat shock cognate protein 70, pseudogene 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:177,651,231...177,653,349 JBrowse link
G Hspa8 heat shock protein family A (Hsp70) member 8 IDA
IBA
PMID:9878698
PMID:21873635
SynGO
GO_Central
PMID:9878698, PMID:21873635 RGD:10059325, RGD:13792537 NCBI chr 8:44,989,401...44,993,261
Ensembl chr 8:44,990,014...44,993,179
JBrowse link
G Htt huntingtin IEA
ISO
GO_REF:0000107
(PMID:7748555)
Ensembl
RGD
PMID:7748555 GO_REF:0000107 NCBI chr14:81,105,139...81,254,637
Ensembl chr14:81,105,139...81,254,637
JBrowse link
G LOC100363133 heat shock cognate 71 kDa protein-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:99,030,998...99,033,110 JBrowse link
G LOC680121 similar to heat shock protein 8 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:13,499,168...13,501,271
Ensembl chr11:13,499,164...13,501,263
JBrowse link
G Mtor mechanistic target of rapamycin kinase IDA PMID:11756682 SynGO PMID:11756682 RGD:13702327 NCBI chr 5:165,263,813...165,373,967
Ensembl chr 5:165,263,800...165,373,967
JBrowse link
G Ncs1 neuronal calcium sensor 1 IDA PMID:11910115 SynGO PMID:11910115 RGD:13702284 NCBI chr 3:10,556,250...10,602,672
Ensembl chr 3:10,553,589...10,602,672
JBrowse link
G Nedd4 NEDD4 E3 ubiquitin protein ligase IEA
ISO
GO_REF:0000107
(MGI:MGI:5763359|PMID:25505317)
Ensembl
RGD
PMID:25505317 GO_REF:0000107, MGI:MGI:5763359 NCBI chr 8:79,323,408...79,408,842
Ensembl chr 8:79,323,408...79,408,833
JBrowse link
G Pin1 peptidylprolyl cis/trans isomerase, NIMA-interacting 1 ISO (PMID:28458925) RGD PMID:28458925 NCBI chr 8:21,669,236...21,680,615
Ensembl chr 8:21,669,236...21,680,615
JBrowse link
G Plcb3 phospholipase C beta 3 IEA
ISO
GO_REF:0000107
(MGI:MGI:3703180|PMID:17298601)
Ensembl
RGD
PMID:17298601 GO_REF:0000107, MGI:MGI:3703180 NCBI chr 1:222,207,887...222,224,993
Ensembl chr 1:222,209,575...222,224,910
JBrowse link
G Prkcd protein kinase C, delta IDA PMID:8263228 SynGO PMID:8263228 RGD:13702395 NCBI chr16:6,655,131...6,675,746
Ensembl chr16:6,655,120...6,675,746
JBrowse link
G Prkcg protein kinase C, gamma IDA PMID:2202488 SynGO PMID:2202488 RGD:13702285 NCBI chr 1:64,407,098...64,433,698
Ensembl chr 1:64,407,114...64,433,636
JBrowse link
G Pten phosphatase and tensin homolog IDA
IMP
PMID:26780512 SynGO PMID:26780512, PMID:26780512 RGD:11352897, RGD:11352897 NCBI chr 1:251,421,814...251,487,634
Ensembl chr 1:251,421,596...251,487,832
JBrowse link
G Rims3 regulating synaptic membrane exocytosis 3 IDA PMID:17534942 SynGO PMID:17534942 RGD:13702423 NCBI chr 5:139,790,395...139,819,014
Ensembl chr 5:139,783,951...139,819,016
JBrowse link
presynaptic cytosol term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07011951.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 2:177,651,241...177,653,288 JBrowse link
G AABR07033324.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr11:17,336,444...17,340,373 JBrowse link
G AABR07048992.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 5:99,031,013...99,033,107 JBrowse link
G Anks1b ankyrin repeat and sterile alpha motif domain containing 1B IDA PMID:20575057 SynGO PMID:20575057 RGD:13702247 NCBI chr 7:30,507,135...31,684,604
Ensembl chr 7:30,699,476...31,681,182
JBrowse link
G Baiap2 BAR/IMD domain containing adaptor protein 2 IDA PMID:15673667 SynGO PMID:15673667 RGD:9684988 NCBI chr10:109,107,326...109,187,458
Ensembl chr10:109,107,389...109,187,115
JBrowse link
G Calb1 calbindin 1 IDA PMID:12528187 SynGO PMID:12528187 RGD:727642 NCBI chr 5:29,538,380...29,562,774
Ensembl chr 5:29,538,380...29,562,773
JBrowse link
G Camk2a calcium/calmodulin-dependent protein kinase II alpha IDA PMID:17957478 SynGO PMID:17957478 RGD:13702290 NCBI chr18:56,193,978...56,295,869
Ensembl chr18:56,193,978...56,295,869
JBrowse link
G Ctbp2 C-terminal binding protein 2 ISO (MGI:MGI:6189269|PMID:22745816) RGD PMID:22745816 MGI:MGI:6189269 NCBI chr 1:205,001,354...205,030,565
Ensembl chr 1:205,001,396...205,040,755
JBrowse link
G Fbxo45 F-box protein 45 ISO (MGI:MGI:4452423|PMID:19996097) RGD PMID:19996097 MGI:MGI:4452423 NCBI chr11:71,795,977...71,811,858
Ensembl chr11:71,796,282...71,808,498
JBrowse link
G Fmr1 FMRP translational regulator 1 ISO (MGI:MGI:3833000|PMID:19193898) RGD PMID:19193898 MGI:MGI:3833000 NCBI chr  X:154,684,924...154,722,369
Ensembl chr  X:154,684,935...154,722,314
JBrowse link
G Hap1 huntingtin-associated protein 1 IDA PMID:9742138 SynGO PMID:9742138 RGD:13702459 NCBI chr10:88,257,975...88,266,210
Ensembl chr10:88,257,976...88,266,210
JBrowse link
G Hnrnpab heterogeneous nuclear ribonucleoprotein A/B ISO (MGI:MGI:5317239|PMID:21471000) RGD PMID:21471000 MGI:MGI:5317239 NCBI chr10:34,955,713...34,961,662
Ensembl chr10:34,955,716...34,961,608
JBrowse link
G Hsc70-ps1 heat shock cognate protein 70, pseudogene 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:177,651,231...177,653,349 JBrowse link
G Hspa8 heat shock protein family A (Hsp70) member 8 IDA
IBA
PMID:9878698
PMID:21873635
SynGO
GO_Central
PMID:9878698, PMID:21873635 RGD:10059325, RGD:13792537 NCBI chr 8:44,989,401...44,993,261
Ensembl chr 8:44,990,014...44,993,179
JBrowse link
G Htt huntingtin ISO (PMID:7748555) RGD PMID:7748555 NCBI chr14:81,105,139...81,254,637
Ensembl chr14:81,105,139...81,254,637
JBrowse link
G LOC100363133 heat shock cognate 71 kDa protein-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:99,030,998...99,033,110 JBrowse link
G LOC680121 similar to heat shock protein 8 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:13,499,168...13,501,271
Ensembl chr11:13,499,164...13,501,263
JBrowse link
G Lrrk2 leucine-rich repeat kinase 2 ISO (MGI:MGI:3711602|PMID:17341485) RGD PMID:17341485 MGI:MGI:3711602 NCBI chr 7:132,857,311...133,018,549
Ensembl chr 7:132,857,628...133,018,584
JBrowse link
G Marcks myristoylated alanine rich protein kinase C substrate EXP
IDA
PMID:2332803 SynGO PMID:2332803, PMID:2332803 RGD:9685308, RGD:9685308 NCBI chr20:42,966,140...42,971,838
Ensembl chr20:42,966,140...42,971,838
JBrowse link
G Marcksl1 MARCKS-like 1 IDA PMID:8557647 SynGO PMID:8557647 RGD:13702350 NCBI chr 5:147,714,163...147,716,486
Ensembl chr 5:147,714,163...147,716,485
JBrowse link
G Ncs1 neuronal calcium sensor 1 IDA PMID:11910115 SynGO PMID:11910115 RGD:13702284 NCBI chr 3:10,556,250...10,602,672
Ensembl chr 3:10,553,589...10,602,672
JBrowse link
G Ppfia2 PTPRF interacting protein alpha 2 ISO (MGI:MGI:6120581|PMID:29439199) RGD PMID:29439199 MGI:MGI:6120581 NCBI chr 7:48,548,932...49,045,852
Ensembl chr 7:48,867,664...49,042,455
JBrowse link
G Ppp3cc protein phosphatase 3 catalytic subunit gamma ISO (MGI:MGI:5755317|PMID:26627835) RGD PMID:26627835 MGI:MGI:5755317 NCBI chr15:51,896,427...51,968,075
Ensembl chr15:51,896,615...51,967,897
JBrowse link
G Prkca protein kinase C, alpha ISO (MGI:MGI:5141567|PMID:21658591) RGD PMID:21658591 MGI:MGI:5141567 NCBI chr10:96,186,509...96,585,168
Ensembl chr10:96,191,133...96,584,947
JBrowse link
G Prkcb protein kinase C, beta ISO (MGI:MGI:5141567|PMID:21658591) RGD PMID:21658591 MGI:MGI:5141567 NCBI chr 1:192,233,569...192,575,339
Ensembl chr 1:192,233,910...192,574,831
JBrowse link
G Prkce protein kinase C, epsilon IDA PMID:8481800 SynGO PMID:8481800 RGD:13702341 NCBI chr 6:9,483,400...9,973,396
Ensembl chr 6:9,790,422...9,973,396
JBrowse link
G Prkcg protein kinase C, gamma ISO (MGI:MGI:5637456|PMID:24794094) RGD PMID:24794094 MGI:MGI:5637456 NCBI chr 1:64,407,098...64,433,698
Ensembl chr 1:64,407,114...64,433,636
JBrowse link
G Sh3gl2 SH3 domain containing GRB2 like 2, endophilin A1 ISO (MGI:MGI:5504308|PMID:23785143) RGD PMID:23785143 MGI:MGI:5504308 NCBI chr 5:103,479,767...103,654,507
Ensembl chr 5:103,479,767...103,654,247
JBrowse link
G Sncb synuclein, beta IDA PMID:7877458 SynGO PMID:7877458 RGD:13702277 NCBI chr17:10,384,472...10,392,776
Ensembl chr17:10,384,511...10,392,843
JBrowse link
G Stxbp5 syntaxin binding protein 5 IDA PMID:9620695 SynGO PMID:9620695 RGD:1299498 NCBI chr 1:3,858,917...4,011,684
Ensembl chr 1:3,858,909...4,011,511
JBrowse link
G Trim9 tripartite motif-containing 9 IDA PMID:11524423 SynGO PMID:11524423 RGD:631246 NCBI chr 6:92,660,026...92,760,036
Ensembl chr 6:92,660,505...92,760,018
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 20610
    cellular anatomical entity 20359
      cytosol 4169
        region of cytosol 47
          postsynaptic cytosol 32
          presynaptic cytosol 31
Path 2
Term Annotations click to browse term
  cellular_component 20610
    cellular anatomical entity 20359
      intracellular anatomical structure 14705
        cytoplasm 11459
          cytosol 4169
            region of cytosol 47
              postsynaptic cytosol 32
              presynaptic cytosol 31
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.