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ONTOLOGY REPORT - ANNOTATIONS


Term:trans-synaptic signaling, modulating synaptic transmission
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Accession:GO:0099550 term browser browse the term
Definition:Cell-cell signaling between presynapse and postsynapse, across the synaptic cleft, that modulates the synaptic transmission properties of the synapse.
Comment:Note that this term was created for the SynGO project, and will be obsoleted when the SynGO annotations are made in Noctua.


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trans-synaptic signaling, modulating synaptic transmission term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cspg5 chondroitin sulfate proteoglycan 5 JBrowse link 8 118,333,695 118,348,040 RGD:1600115
RGD:1624291
RGD:13792537
retrograde trans-synaptic signaling by neuropeptide, modulating synaptic transmission term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bdnf brain-derived neurotrophic factor JBrowse link 3 100,768,637 100,819,216 RGD:1624291
retrograde trans-synaptic signaling by nitric oxide, modulating synaptic transmission term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gucy1a1 guanylate cyclase 1 soluble subunit alpha 1 JBrowse link 2 181,045,694 181,103,321 RGD:1600115
RGD:1624291
trans-synaptic signaling by BDNF, modulating synaptic transmission term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ntrk2 neurotrophic receptor tyrosine kinase 2 JBrowse link 17 5,934,651 6,245,778 RGD:1600115
RGD:1624291
G Plat plasminogen activator, tissue type JBrowse link 16 74,098,263 74,122,897 RGD:1624291
G Plg plasminogen JBrowse link 1 48,521,828 48,563,895 RGD:1624291
G Syt4 synaptotagmin 4 JBrowse link 18 24,172,580 24,181,989 RGD:1624291
trans-synaptic signaling by endocannabinoid, modulating synaptic transmission term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cnr1 cannabinoid receptor 1 JBrowse link 5 49,307,584 49,333,064 RGD:1624291
G F2r coagulation factor II (thrombin) receptor JBrowse link 2 26,118,760 26,135,340 RGD:1624291
RGD:1600115
G Grm5 glutamate metabotropic receptor 5 JBrowse link 1 151,207,846 151,785,038 RGD:12050103
RGD:13792537
G Pak1 p21 (RAC1) activated kinase 1 JBrowse link 1 162,768,156 162,883,356 RGD:1624291
trans-synaptic signaling by neuropeptide, modulating synaptic transmission term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ntrk2 neurotrophic receptor tyrosine kinase 2 JBrowse link 17 5,934,651 6,245,778 RGD:1600115
RGD:13792537
RGD:1624291
trans-synaptic signaling by nitric oxide, modulating synaptic transmission term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gucy1b1 guanylate cyclase 1 soluble subunit beta 1 JBrowse link 2 180,976,939 181,026,001 RGD:1624291
RGD:13792537
trans-synaptic signaling by trans-synaptic complex, modulating synaptic transmission term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Efnb3 ephrin B3 JBrowse link 10 56,161,431 56,168,819 RGD:1624291
G Ephb2 Eph receptor B2 JBrowse link 5 155,024,478 155,143,539 RGD:1624291
G Nptn neuroplastin JBrowse link 8 63,379,062 63,445,694 RGD:8553916

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19858
    signaling 7553
      regulation of signaling 3589
        regulation of trans-synaptic signaling 664
          modulation of chemical synaptic transmission 663
            trans-synaptic signaling, modulating synaptic transmission 15
              trans-synaptic signaling by BDNF, modulating synaptic transmission + 4
              trans-synaptic signaling by lipid, modulating synaptic transmission + 4
              trans-synaptic signaling by neuropeptide, modulating synaptic transmission + 2
              trans-synaptic signaling by soluble gas, modulating synaptic transmission + 2
              trans-synaptic signaling by trans-synaptic complex, modulating synaptic transmission 3
Path 2
Term Annotations click to browse term
  biological_process 19858
    cellular process 18618
      cell communication 7631
        cell-cell signaling 1794
          synaptic signaling 913
            trans-synaptic signaling 885
              anterograde trans-synaptic signaling 876
                chemical synaptic transmission 876
                  modulation of chemical synaptic transmission 663
                    trans-synaptic signaling, modulating synaptic transmission 15
                      trans-synaptic signaling by BDNF, modulating synaptic transmission + 4
                      trans-synaptic signaling by lipid, modulating synaptic transmission + 4
                      trans-synaptic signaling by neuropeptide, modulating synaptic transmission + 2
                      trans-synaptic signaling by soluble gas, modulating synaptic transmission + 2
                      trans-synaptic signaling by trans-synaptic complex, modulating synaptic transmission 3
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.