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ONTOLOGY REPORT - ANNOTATIONS


Term:hydrocarbon metabolic process
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Accession:GO:0120252 term browser browse the term
Definition:The chemical reactions and pathways involving a hydrocarbon, a compound consisting of carbon and hydrogen only.
Synonyms:exact_synonym: hydrocarbon metabolism


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beta-carotene metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bco1 beta-carotene oxygenase 1 ISO
IEA
MGI:MGI:3767552 (MGI:MGI:5638293|PMID:25701869)
GO_REF:0000107
RGD
Ensembl
PMID:25701869 GO_REF:0000107, MGI:MGI:5638293 NCBI chr19:49,637,059...49,673,577
Ensembl chr19:49,637,016...49,673,808
JBrowse link
carotene catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bco1 beta-carotene oxygenase 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:49,637,059...49,673,577
Ensembl chr19:49,637,016...49,673,808
JBrowse link
G Bco2 beta-carotene oxygenase 2 ISO
IBA
(PMID:21302131)
PMID:21873635
(MGI:MGI:4947204|PMID:21106934)
RGD PMID:21106934, PMID:21302131, PMID:21873635 MGI:MGI:4947204, RGD:13792537 NCBI chr 8:54,965,577...54,990,604
Ensembl chr 8:54,965,583...54,998,864
JBrowse link
carotene metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bco2 beta-carotene oxygenase 2 ISO (PMID:11278918)
(MGI:MGI:2159483|PMID:11278918)
RGD PMID:11278918 MGI:MGI:2159483 NCBI chr 8:54,965,577...54,990,604
Ensembl chr 8:54,965,583...54,998,864
JBrowse link
naphthalene metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akr1b1 aldo-keto reductase family 1 member B IDA RGD PMID:8407226 RGD:8548677 NCBI chr 4:61,706,866...61,720,959
Ensembl chr 4:61,706,864...61,720,956
JBrowse link
G Cyp2f4 cytochrome P450, family 2, subfamily f, polypeptide 4 IDA
IBA
ISO
PMID:21873635
(PMID:10383923)
(MGI:MGI:3655180|PMID:16876762)
RGD PMID:10383923, PMID:16876762, PMID:15509722, PMID:21873635 MGI:MGI:3655180, RGD:2301694, RGD:13792537 NCBI chr 1:83,933,974...83,947,804
Ensembl chr 1:83,933,942...83,947,821
JBrowse link
propylene metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Grin1 glutamate ionotropic receptor NMDA type subunit 1 ISO
IEA
(MGI:MGI:5320264|PMID:21795692)
GO_REF:0000107
RGD
Ensembl
PMID:21795692 GO_REF:0000107, MGI:MGI:5320264 NCBI chr 3:2,507,745...2,534,664
Ensembl chr 3:2,506,896...2,534,663
JBrowse link
stilbene catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ephx2 epoxide hydrolase 2 IEA
ISO
GO_REF:0000107
(PMID:8342951)
Ensembl
RGD
PMID:8342951 GO_REF:0000107 NCBI chr15:42,757,241...42,794,211
Ensembl chr15:42,757,235...42,794,279
JBrowse link
terpene metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Th tyrosine hydroxylase IEP RGD PMID:20934257 RGD:5128841 NCBI chr 1:216,073,034...216,080,287
Ensembl chr 1:216,073,031...216,080,287
JBrowse link
toluene metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hsd3b1 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1 IEP RGD PMID:19110042 RGD:4766784

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20027
    metabolic process 12278
      organic substance metabolic process 11660
        hydrocarbon metabolic process 8
          benzene metabolic process + 0
          cellular alkane metabolic process + 0
          cellular alkyne metabolic process + 0
          ethylbenzene metabolic process + 0
          fluorene metabolic process + 0
          hydrocarbon biosynthetic process + 0
          hydrocarbon catabolic process + 3
          naphthalene metabolic process + 2
          olefin metabolic process + 2
          phenanthrene metabolic process + 0
          terpene metabolic process + 3
          toluene metabolic process + 1
          xylene metabolic process + 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.