ONTOLOGY REPORT - ANNOTATIONS


Term:exocytic process
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Accession:GO:0140029 term browser browse the term
Definition:The cellular processes that contribute to exocytosis.


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calcium-dependent activation of synaptic vesicle fusion term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Prrt2 proline-rich transmembrane protein 2 JBrowse link 1 198,451,042 198,454,998 RGD:1600115
RGD:1624291
G Syt1 synaptotagmin 1 JBrowse link 7 50,084,063 50,638,996 RGD:1600115
RGD:1624291
G Syt2 synaptotagmin 2 JBrowse link 13 51,569,248 51,577,824 RGD:1624291
G Syt7 synaptotagmin 7 JBrowse link 1 226,435,816 226,498,008 RGD:1624291
G Syt9 synaptotagmin 9 JBrowse link 1 171,592,703 171,769,780 RGD:1600115
RGD:1624291
dense core granule docking term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Unc13a unc-13 homolog A JBrowse link 16 20,056,398 20,103,951 RGD:1624291
G Unc13b unc-13 homolog B JBrowse link 5 58,505,449 58,714,396 RGD:1624291
dense core granule priming term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Unc13a unc-13 homolog A JBrowse link 16 20,056,398 20,103,951 RGD:12050107
RGD:13792537
G Unc13b unc-13 homolog B JBrowse link 5 58,505,449 58,714,396 RGD:12050107
RGD:13792537
G Unc13c unc-13 homolog C JBrowse link 8 80,202,736 80,656,363 RGD:13792537
G Unc13d unc-13 homolog D JBrowse link 10 104,613,907 104,628,664 RGD:12050107
exocyst assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Exoc8 exocyst complex component 8 JBrowse link 19 57,647,305 57,649,794 RGD:13792537
histamine secretion by mast cell term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adora3 adenosine A3 receptor JBrowse link 2 208,336,909 208,379,217 RGD:1624291
G Btk Bruton tyrosine kinase JBrowse link X 105,360,922 105,390,580 RGD:1600535
G Lyn LYN proto-oncogene, Src family tyrosine kinase JBrowse link 5 16,526,058 16,642,648 RGD:1578516
G Snap23 synaptosome associated protein 23 JBrowse link 3 112,333,972 112,362,960 RGD:1624291
G Ywhaz tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta JBrowse link 7 75,573,553 75,598,295 RGD:1625716
positive regulation of histamine secretion by mast cell term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nppa natriuretic peptide A JBrowse link 5 164,808,407 164,809,716 RGD:13461752
G Snx4 sorting nexin 4 JBrowse link 11 70,693,381 70,753,620 RGD:1624291
RGD:1600115
G Vamp7 vesicle-associated membrane protein 7 JBrowse link 12 18,996,566 19,033,714 RGD:1624291
RGD:1600115
G Vamp8 vesicle-associated membrane protein 8 JBrowse link 4 100,250,301 100,252,756 RGD:1600115
RGD:1624291
positive regulation of synaptic vesicle fusion to presynaptic active zone membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Rims1 regulating synaptic membrane exocytosis 1 JBrowse link 9 28,440,408 28,973,246 RGD:633897
positive regulation of synaptic vesicle priming term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Rims1 regulating synaptic membrane exocytosis 1 JBrowse link 9 28,440,408 28,973,246 RGD:10047275
G Unc13b unc-13 homolog B JBrowse link 5 58,505,449 58,714,396 RGD:10047275
protein secretion by platelet term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dmtn dematin actin binding protein JBrowse link 15 52,292,762 52,320,385 RGD:1624291
RGD:1600115
G Plek pleckstrin JBrowse link 14 100,151,518 100,184,192 RGD:1624291
RGD:1600115
regulation of exocyst assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ncam1 neural cell adhesion molecule 1 JBrowse link 8 53,836,797 54,134,881 RGD:1624291
G Ralb RAS like proto-oncogene B JBrowse link 13 35,494,716 35,531,503 RGD:8554641
regulation of histamine secretion by mast cell term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Snx6 sorting nexin 6 JBrowse link 6 75,626,927 75,670,172 RGD:1624291
G Vamp2 vesicle-associated membrane protein 2 JBrowse link 10 55,675,171 55,679,405 RGD:1624291
G Vamp3 vesicle-associated membrane protein 3 JBrowse link 5 168,126,157 168,136,628 RGD:1624291
regulation of synaptic vesicle docking term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Camk2a calcium/calmodulin-dependent protein kinase II alpha JBrowse link 18 56,193,978 56,295,869 RGD:1600115
RGD:1624291
G Sept5 septin 5 JBrowse link 11 86,516,377 86,522,169 RGD:1624291
regulation of synaptic vesicle fusion to presynaptic active zone membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cplx1 complexin 1 JBrowse link 14 2,194,895 2,226,610 RGD:1600115
RGD:1624291
G Cplx2 complexin 2 JBrowse link 17 10,756,871 10,828,811 RGD:1600115
RGD:1624291
G Cplx3 complexin 3 JBrowse link 8 62,379,502 62,386,264 RGD:1600115
RGD:1624291
G Grik5 glutamate ionotropic receptor kainate type subunit 5 JBrowse link 1 81,885,516 81,946,731 RGD:1624291
RGD:1600115
G Rab3a RAB3A, member RAS oncogene family JBrowse link 16 20,435,098 20,439,206 RGD:1600115
RGD:13792537
RGD:1624291
G Vamp1 vesicle-associated membrane protein 1 JBrowse link 4 157,726,941 157,733,644 RGD:1600115
regulation of synaptic vesicle priming term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Napa NSF attachment protein alpha JBrowse link 1 77,994,227 78,012,846 RGD:1624291
RGD:13792537
G Napb NSF attachment protein beta JBrowse link 3 143,017,571 143,063,904 RGD:1624291
RGD:13792537
RGD:1600115
G Rab3a RAB3A, member RAS oncogene family JBrowse link 16 20,435,098 20,439,206 RGD:14390056
G Stx1a syntaxin 1A JBrowse link 12 24,682,050 24,710,002 RGD:1624291
RGD:1600115
G Stx1b syntaxin 1B JBrowse link 1 199,251,842 199,270,465 RGD:1624291
RGD:1600115
G Stxbp1 syntaxin binding protein 1 JBrowse link 3 11,823,779 11,885,479 RGD:2311128
RGD:14390056
G Stxbp5 syntaxin binding protein 5 JBrowse link 1 3,858,917 4,011,684 RGD:1624291
G Unc13a unc-13 homolog A JBrowse link 16 20,056,398 20,103,951 RGD:14390056
serotonin secretion by mast cell term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cd300a Cd300a molecule JBrowse link 10 103,437,978 103,451,170 RGD:1624291
serotonin secretion by platelet term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fcer1g Fc fragment of IgE receptor Ig JBrowse link 13 89,601,894 89,606,326 RGD:1624291
RGD:1600115
G P2rx1 purinergic receptor P2X 1 JBrowse link 10 59,566,268 59,581,328 RGD:1624291
RGD:1600115
G Syk spleen associated tyrosine kinase JBrowse link 17 12,614,311 12,669,568 RGD:1600115
RGD:1624291
synaptic vesicle docking term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ctbp2 C-terminal binding protein 2 JBrowse link 1 205,001,354 205,030,565 RGD:1624291
RGD:1600115
G Ppfia3 PTPRF interacting protein alpha 3 JBrowse link 1 101,328,547 101,357,391 RGD:1600115
RGD:1624291
G Rims1 regulating synaptic membrane exocytosis 1 JBrowse link 9 28,440,408 28,973,246 RGD:1624291
G Rims2 regulating synaptic membrane exocytosis 2 JBrowse link 7 78,091,998 78,594,164 RGD:1624291
G Sptbn2 spectrin, beta, non-erythrocytic 2 JBrowse link 1 219,964,429 220,006,811 RGD:70020
G Stx1a syntaxin 1A JBrowse link 12 24,682,050 24,710,002 RGD:8553325
G Stx1b syntaxin 1B JBrowse link 1 199,251,842 199,270,465 RGD:1600115
RGD:1624291
G Stx3 syntaxin 3 JBrowse link 1 228,137,781 228,195,004 RGD:68313
G Stx4 syntaxin 4 JBrowse link 1 199,287,384 199,295,606 RGD:68313
G Syde1 synapse defective Rho GTPase homolog 1 JBrowse link 7 14,037,646 14,043,632 RGD:1624291
G Unc13a unc-13 homolog A JBrowse link 16 20,056,398 20,103,951 RGD:1624291
RGD:13792537
RGD:1600115
G Unc13b unc-13 homolog B JBrowse link 5 58,505,449 58,714,396 RGD:1624291
RGD:13792537
G Unc13c unc-13 homolog C JBrowse link 8 80,202,736 80,656,363 RGD:13792537
G Vamp2 vesicle-associated membrane protein 2 JBrowse link 10 55,675,171 55,679,405 RGD:1600115
RGD:1624291
synaptic vesicle fusion to presynaptic active zone membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G LOC103690878 syntaxin-3-like JBrowse link X 79,742,224 79,743,117 RGD:13792537
G Prrt2 proline-rich transmembrane protein 2 JBrowse link 1 198,451,042 198,454,998 RGD:1600115
RGD:1624291
G Snap23 synaptosome associated protein 23 JBrowse link 3 112,333,972 112,362,960 RGD:13792537
G Snap25 synaptosome associated protein 25 JBrowse link 3 129,697,408 129,788,417 RGD:13792537
G Snap29 synaptosome associated protein 29 JBrowse link 11 87,827,633 87,858,107 RGD:13792537
G Snap47 synaptosome associated protein 47 JBrowse link 10 45,757,196 45,798,734 RGD:13792537
G Snapin SNAP-associated protein JBrowse link 2 189,878,159 189,880,743 RGD:1624291
RGD:1600115
G Stx11 syntaxin 11 JBrowse link 1 7,039,160 7,064,870 RGD:13792537
G Stx1a syntaxin 1A JBrowse link 12 24,682,050 24,710,002 RGD:11535099
RGD:13792537
G Stx1b syntaxin 1B JBrowse link 1 199,251,842 199,270,465 RGD:1624291
RGD:13792537
G Stx2 syntaxin 2 JBrowse link 12 31,324,203 31,360,249 RGD:13792537
G Stx3 syntaxin 3 JBrowse link 1 228,137,781 228,195,004 RGD:13792537
G Stx4 syntaxin 4 JBrowse link 1 199,287,384 199,295,606 RGD:13792537
synaptic vesicle priming term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cadps calcium dependent secretion activator JBrowse link 15 15,275,489 15,690,575 RGD:1600115
RGD:1624291
G Cadps2 calcium dependent secretion activator 2 JBrowse link 4 50,326,447 50,861,161 RGD:1600115
RGD:1624291
G Erc1 ELKS/RAB6-interacting/CAST family member 1 JBrowse link 4 152,087,393 152,380,023 RGD:1624291
G Erc2 ELKS/RAB6-interacting/CAST family member 2 JBrowse link 16 3,258,580 4,283,592 RGD:1624291
G Napa NSF attachment protein alpha JBrowse link 1 77,994,227 78,012,846 RGD:1600115
RGD:1624291
G Otof otoferlin JBrowse link 6 27,328,343 27,424,864 RGD:1624291
G Rims1 regulating synaptic membrane exocytosis 1 JBrowse link 9 28,440,408 28,973,246 RGD:1624291
G Rims2 regulating synaptic membrane exocytosis 2 JBrowse link 7 78,091,998 78,594,164 RGD:1624291
G Snap23 synaptosome associated protein 23 JBrowse link 3 112,333,972 112,362,960 RGD:13792537
G Snap25 synaptosome associated protein 25 JBrowse link 3 129,697,408 129,788,417 RGD:13792537
G Snap29 synaptosome associated protein 29 JBrowse link 11 87,827,633 87,858,107 RGD:13792537
G Snap47 synaptosome associated protein 47 JBrowse link 10 45,757,196 45,798,734 RGD:13792537
G Snca synuclein alpha JBrowse link 4 90,782,412 90,883,236 RGD:1600115
RGD:1624291
G Stxbp1 syntaxin binding protein 1 JBrowse link 3 11,823,779 11,885,479 RGD:1600115
RGD:1624291
G Sv2a synaptic vesicle glycoprotein 2a JBrowse link 2 198,321,100 198,336,889 RGD:1600115
RGD:1624291
G Synj1 synaptojanin 1 JBrowse link 11 31,105,784 31,181,573 RGD:1624291
G Unc13a unc-13 homolog A JBrowse link 16 20,056,398 20,103,951 RGD:5686389
RGD:13792537
RGD:1624291
RGD:1600115
G Unc13b unc-13 homolog B JBrowse link 5 58,505,449 58,714,396 RGD:11535109
RGD:13792537
RGD:1624291
RGD:1600115
G Unc13c unc-13 homolog C JBrowse link 8 80,202,736 80,656,363 RGD:11535109
RGD:13792537
G Vamp1 vesicle-associated membrane protein 1 JBrowse link 4 157,726,941 157,733,644 RGD:1600115
synaptic vesicle targeting term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nlgn1 neuroligin 1 JBrowse link 2 111,057,291 111,973,681 RGD:1624291
RGD:1600115
G Pclo piccolo (presynaptic cytomatrix protein) JBrowse link 4 16,454,904 17,058,921 RGD:69383
G Psen1 presenilin 1 JBrowse link 6 107,169,514 107,221,000 RGD:1624291
RGD:1600115
G Scrib scribble planar cell polarity protein JBrowse link 7 117,105,810 117,128,802 RGD:1624291
RGD:1600115
vesicle docking involved in exocytosis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cftr cystic fibrosis transmembrane conductance regulator JBrowse link 4 42,693,263 42,860,679 RGD:1600115
RGD:1624291
G Cplx2 complexin 2 JBrowse link 17 10,756,871 10,828,811 RGD:70701
G Exoc4 exocyst complex component 4 JBrowse link 4 60,549,128 61,358,305 RGD:1600115
G Exoc6 exocyst complex component 6 JBrowse link 1 256,211,879 256,369,318 RGD:1600115
G Exoc6b exocyst complex component 6B JBrowse link 4 116,314,695 116,786,466 RGD:1600115
G Kcnb1 potassium voltage-gated channel subfamily B member 1 JBrowse link 3 163,850,785 163,935,610 RGD:10047179
G Nrxn1 neurexin 1 JBrowse link 6 13,886,757 15,191,660 RGD:8553305
G Plek pleckstrin JBrowse link 14 100,151,518 100,184,192 RGD:1624291
RGD:1600115
G Rab10 RAB10, member RAS oncogene family JBrowse link 6 27,668,387 27,721,120 RGD:13792537
G Rab15 RAB15, member RAS oncogene family JBrowse link 6 99,845,952 99,870,320 RGD:13792537
G Rab3a RAB3A, member RAS oncogene family JBrowse link 16 20,435,098 20,439,206 RGD:13792537
G Rab3b RAB3B, member RAS oncogene family JBrowse link 5 128,501,789 128,568,170 RGD:13792537
G Rab3c RAB3C, member RAS oncogene family JBrowse link 2 41,570,955 41,786,681 RGD:13792537
G Rab3d RAB3D, member RAS oncogene family JBrowse link 8 22,920,238 22,929,368 RGD:13792537
G Rab8a RAB8A, member RAS oncogene family JBrowse link 16 19,355,047 19,376,776 RGD:1624291
RGD:13792537
G Rab8b RAB8B, member RAS oncogene family JBrowse link 8 72,641,680 72,714,646 RGD:13792537
G Scfd1 sec1 family domain containing 1 JBrowse link 6 72,124,408 72,202,703 RGD:1600115
G Scfd2 sec1 family domain containing 2 JBrowse link 14 36,216,002 36,543,661 RGD:1600115
G Stx1b syntaxin 1B JBrowse link 1 199,251,842 199,270,465 RGD:1624291
RGD:1600115
G Stxbp1 syntaxin binding protein 1 JBrowse link 3 11,823,779 11,885,479 RGD:1600115
RGD:1624291
G Stxbp2 syntaxin binding protein 2 JBrowse link 12 2,180,101 2,191,863 RGD:1600115
G Stxbp3 syntaxin binding protein 3 JBrowse link 2 211,595,763 211,638,756 RGD:1302922
G Sytl2 synaptotagmin-like 2 JBrowse link 1
1
154,536,592
156,334,298
154,599,515
156,440,327
RGD:1624291
G Vps11 VPS11 core subunit of CORVET and HOPS complexes JBrowse link 8 48,677,492 48,692,295 RGD:13792537
G Vps18 VPS18 core subunit of CORVET and HOPS complexes JBrowse link 3 111,097,352 111,108,206 RGD:13792537
G Vps33a VPS33A core subunit of CORVET and HOPS complexes JBrowse link 12 38,459,816 38,482,903 RGD:1600115
G Vps33b VPS33B, late endosome and lysosome associated JBrowse link 1 142,060,955 142,083,955 RGD:1600115
G Vps45 vacuolar protein sorting 45 homolog JBrowse link 2 198,123,747 198,184,739 RGD:1600115
G Ykt6 YKT6 v-SNARE homolog JBrowse link 14 86,196,018 86,207,057 RGD:1624291
RGD:8553660
vesicle fusion to plasma membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Trarg1 trafficking regulator of GLUT4 (SLC2A4) 1 JBrowse link 10 63,471,330 63,491,713 RGD:1624291
RGD:1600115
vesicle tethering involved in exocytosis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Exoc4 exocyst complex component 4 JBrowse link 4 60,549,128 61,358,305 RGD:1600115

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17896
    cellular process 16040
      exocytic process 96
        dense core granule priming 4
        exocyst assembly + 3
        histamine secretion by basophil 0
        histamine secretion by mast cell + 12
        histamine secretion by platelet 0
        multivesicular body fusion to apical plasma membrane 0
        pore formation during contractile vacuole discharge 0
        protein secretion by platelet 2
        serotonin secretion by basophil 0
        serotonin secretion by mast cell 1
        serotonin secretion by platelet 3
        synaptic vesicle priming + 25
        synaptic vesicle targeting 4
        vesicle docking involved in exocytosis + 47
        vesicle fusion to plasma membrane + 25
        vesicle tethering involved in exocytosis + 1
Path 2
Term Annotations click to browse term
  biological_process 17896
    localization 5958
      establishment of localization 4566
        transport 4429
          secretion 1303
            secretion by cell 1112
              exocytosis 397
                exocytic process 96
                  dense core granule priming 4
                  exocyst assembly + 3
                  histamine secretion by basophil 0
                  histamine secretion by mast cell + 12
                  histamine secretion by platelet 0
                  multivesicular body fusion to apical plasma membrane 0
                  pore formation during contractile vacuole discharge 0
                  protein secretion by platelet 2
                  serotonin secretion by basophil 0
                  serotonin secretion by mast cell 1
                  serotonin secretion by platelet 3
                  synaptic vesicle priming + 25
                  synaptic vesicle targeting 4
                  vesicle docking involved in exocytosis + 47
                  vesicle fusion to plasma membrane + 25
                  vesicle tethering involved in exocytosis + 1
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.