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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of protein K63-linked ubiquitination
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Accession:GO:1900044 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of protein K63-linked ubiquitination.
Synonyms:exact_synonym: regulation of protein K63-linked polyubiquitination


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regulation of protein K63-linked ubiquitination term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sash1 SAM and SH3 domain containing 1 ISO (PMID:23776175) RGD PMID:23776175 NCBI chr 1:2,782,905...2,950,749
Ensembl chr 1:2,782,864...2,846,200
JBrowse link
negative regulation of histone H2A K63-linked ubiquitination term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Otub1 OTU deubiquitinase, ubiquitin aldehyde binding 1 ISO
IBA
ISS
(PMID:20725033)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:20725033, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 1:222,451,674...222,459,952
Ensembl chr 1:222,451,674...222,459,952
JBrowse link
G Otub2 OTU deubiquitinase, ubiquitin aldehyde binding 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:127,282,445...127,301,086
Ensembl chr 6:127,282,466...127,301,083
JBrowse link
G Trip12 thyroid hormone receptor interactor 12 IEA
IBA
ISS
ISO
GO_REF:0000107
PMID:21873635
GO_REF:0000024
(PMID:22884692)
Ensembl
UniProt
RGD
PMID:22884692, PMID:21873635 GO_REF:0000024, GO_REF:0000107, RGD:13792537 NCBI chr 9:92,305,059...92,435,388
Ensembl chr 9:92,305,051...92,435,365
JBrowse link
G Ubr5 ubiquitin protein ligase E3 component n-recognin 5 IEA
IBA
ISS
ISO
GO_REF:0000107
PMID:21873635
GO_REF:0000024
(PMID:22884692)
Ensembl
UniProt
RGD
PMID:22884692, PMID:21873635 GO_REF:0000024, GO_REF:0000107, RGD:13792537 NCBI chr 7:76,789,110...76,835,517
NCBI chr 7:76,839,661...76,907,441
Ensembl chr 7:76,789,531...76,853,840
JBrowse link
negative regulation of protein K63-linked ubiquitination term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gps2 G protein pathway suppressor 2 ISO (MGI:MGI:5896692|PMID:28039360), (MGI:MGI:6148392|PMID:24953653), (MGI:MGI:6148396|PMID:29499132), (MGI:MGI:6148454|PMID:22424771) RGD PMID:22424771, PMID:24953653, PMID:28039360, PMID:29499132 MGI:MGI:5896692, MGI:MGI:6148392, MGI:MGI:6148396, MGI:MGI:6148454 NCBI chr10:56,524,327...56,527,447
Ensembl chr10:56,524,468...56,526,987
JBrowse link
G Parp10 poly (ADP-ribose) polymerase family, member 10 ISO (PMID:23575687) RGD PMID:23575687 NCBI chr 7:117,291,592...117,300,878
Ensembl chr 7:117,291,877...117,300,662
JBrowse link
G Plaa phospholipase A2, activating protein ISO
ISS
(MGI:MGI:5883825|PMID:28413018)
GO_REF:0000024
RGD
UniProt
PMID:28413018 GO_REF:0000024, MGI:MGI:5883825 NCBI chr 5:113,548,913...113,578,928
Ensembl chr 5:113,548,913...113,578,928
JBrowse link
positive regulation of protein K63-linked ubiquitination term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Birc2 baculoviral IAP repeat-containing 2 ISO (PMID:21931591) RGD PMID:21931591 NCBI chr 8:6,014,014...6,036,668
Ensembl chr 8:6,013,207...6,034,142
JBrowse link
G Ddx3x DEAD-box helicase 3, X-linked ISO (PMID:27980081) RGD PMID:27980081 NCBI chr  X:10,400,363...10,414,010
Ensembl chr  X:10,400,366...10,413,995
JBrowse link
G Nod2 nucleotide-binding oligomerization domain containing 2 ISO (PMID:25891078) RGD PMID:25891078 NCBI chr19:19,342,061...19,389,366
Ensembl chr19:19,332,594...19,377,492
JBrowse link
G Ptpn22 protein tyrosine phosphatase, non-receptor type 22 ISO
IBA
(PMID:23871208)
(MGI:MGI:5562517|PMID:23871208)
PMID:21873635
RGD PMID:23871208, PMID:21873635 MGI:MGI:5562517, RGD:13792537 NCBI chr 2:206,342,066...206,390,348
Ensembl chr 2:206,342,066...206,390,348
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20027
    cellular process 18798
      cellular metabolic process 11085
        regulation of cellular metabolic process 6234
          regulation of cellular protein metabolic process 2805
            regulation of protein modification process 1965
              regulation of protein modification by small protein conjugation or removal 248
                regulation of protein ubiquitination 212
                  regulation of protein polyubiquitination 29
                    regulation of protein K63-linked ubiquitination 12
                      negative regulation of protein K63-linked ubiquitination + 7
                      positive regulation of protein K63-linked ubiquitination + 4
                      regulation of histone H2A K63-linked ubiquitination + 4
Path 2
Term Annotations click to browse term
  biological_process 20027
    metabolic process 12278
      organic substance metabolic process 11660
        macromolecule metabolic process 10098
          protein metabolic process 6264
            protein modification process 3949
              cellular protein modification process 3949
                protein modification by small protein conjugation or removal 952
                  protein modification by small protein conjugation 816
                    protein ubiquitination 767
                      protein polyubiquitination 241
                        protein K63-linked ubiquitination 58
                          regulation of protein K63-linked ubiquitination 12
                            negative regulation of protein K63-linked ubiquitination + 7
                            positive regulation of protein K63-linked ubiquitination + 4
                            regulation of histone H2A K63-linked ubiquitination + 4
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.