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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of long-term synaptic potentiation
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Accession:GO:1900271 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of long-term synaptic potentiation.
Synonyms:broad_synonym: regulation of long-term potentiation
 related_synonym: regulation of LTP


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regulation of long-term synaptic potentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ager advanced glycosylation end product-specific receptor ISO (MGI:6114835|PMID:19221410) RGD PMID:19221410 MGI:6114835 NCBI chr20:4,363,152...4,366,079
Ensembl chr20:4,363,152...4,366,079
JBrowse link
G Arc activity-regulated cytoskeleton-associated protein IMP
IBA
ISO
ISS
PMID:17898216
PMID:21873635
(MGI:6316437|PMID:31151856)
GO_REF:0000024
PMID:10818134
RGD
UniProt
PMID:31151856, PMID:17898216, PMID:21873635, PMID:10818134 GO_REF:0000024, MGI:6316437, RGD:12793056, RGD:13792537, RGD:13514089 NCBI chr 7:115,907,097...115,911,059
Ensembl chr 7:115,907,097...115,910,541
JBrowse link
G Calb1 calbindin 1 ISO
IBA
(MGI:3775957|PMID:11955516)
PMID:21873635
RGD PMID:11955516, PMID:21873635 MGI:3775957, RGD:13792537 NCBI chr 5:29,538,380...29,562,774
Ensembl chr 5:29,538,380...29,562,773
JBrowse link
G Calb2 calbindin 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:41,482,743...41,509,617
Ensembl chr19:41,482,728...41,509,658
JBrowse link
G Cyp46a1 cytochrome P450, family 46, subfamily a, polypeptide 1 ISO (MGI:3620343|PMID:16505352) RGD PMID:16505352 MGI:3620343 NCBI chr 6:132,242,328...132,273,788
Ensembl chr 6:132,242,328...132,273,787
JBrowse link
G Gsk3b glycogen synthase kinase 3 beta ISS
ISO
GO_REF:0000024
(MGI:6294161|PMID:28556462)
UniProt
RGD
PMID:28556462 GO_REF:0000024, MGI:6294161 NCBI chr11:65,060,884...65,208,842
Ensembl chr11:65,066,235...65,209,268
JBrowse link
G Ncstn nicastrin ISO MGI:3796837 (MGI:5575797|PMID:24889619) RGD PMID:24889619 MGI:5575797 NCBI chr13:90,451,046...90,467,256
Ensembl chr13:90,451,044...90,467,256
JBrowse link
G Nf1 neurofibromin 1 IEA
ISO
GO_REF:0000107
MGI:1339975 (MGI:5620820|PMID:25242307)
Ensembl
RGD
PMID:25242307 GO_REF:0000107, MGI:5620820 NCBI chr10:66,732,460...66,928,706
Ensembl chr10:66,690,133...66,928,903
JBrowse link
G Nlgn3 neuroligin 3 IEA
ISO
ISS
GO_REF:0000107
(MGI:5286761|PMID:21808020)
GO_REF:0000024
Ensembl
RGD
BHF-UCL
PMID:21808020, PMID:21808020 GO_REF:0000024, GO_REF:0000107, MGI:5286761, RGD:8553412 NCBI chr  X:71,199,390...71,227,460
Ensembl chr  X:71,199,491...71,222,732
JBrowse link
G Nsg1 neuronal vesicle trafficking associated 1 IMP PMID:15911354 UniProt PMID:15911354 RGD:9850096 NCBI chr14:77,380,264...77,402,007
Ensembl chr14:77,380,262...77,401,996
JBrowse link
G Paip2 poly(A) binding protein interacting protein 2 ISO (MGI:5494875|PMID:23622065) RGD PMID:23622065 MGI:5494875 NCBI chr18:28,397,320...28,415,911
Ensembl chr18:28,409,955...28,415,910
JBrowse link
G Pak1 p21 (RAC1) activated kinase 1 ISO MGI:97306 (MGI:5620820|PMID:25242307) RGD PMID:25242307 MGI:5620820 NCBI chr 1:162,768,156...162,883,356
Ensembl chr 1:162,768,156...162,883,355
JBrowse link
G Pirb paired Ig-like receptor B ISO ComplexPortal:CPX-1134 (MGI:5511064|PMID:24052308) RGD PMID:24052308 MGI:5511064 NCBI chr 1:64,074,097...64,081,568
Ensembl chr 1:64,074,231...64,081,438
JBrowse link
G Scgn secretagogin, EF-hand calcium binding protein IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:43,357,888...43,399,321
Ensembl chr17:43,357,888...43,399,321
JBrowse link
G Shank3 SH3 and multiple ankyrin repeat domains 3 ISS
ISO
GO_REF:0000024
(MGI:5013997|PMID:21558424)
BHF-UCL
RGD
PMID:21558424 GO_REF:0000024, MGI:5013997 NCBI chr 7:130,474,278...130,534,679
Ensembl chr 7:130,474,279...130,534,679
JBrowse link
G Ythdf1 YTH N(6)-methyladenosine RNA binding protein 1 ISO (MGI:6241448|PMID:30401835) RGD PMID:30401835 MGI:6241448 NCBI chr 3:176,415,911...176,431,423
Ensembl chr 3:176,415,914...176,431,423
JBrowse link
negative regulation of long-term synaptic potentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase ISO ComplexPortal:CPX-1134|UniProtKB:Q03137 (MGI:5588508|PMID:24658113) RGD PMID:24658113 MGI:5588508 NCBI chr 3:10,041,820...10,145,076
Ensembl chr 3:10,041,826...10,144,388
JBrowse link
G Adora1 adenosine A1 receptor IMP RGD PMID:14596853 RGD:1625717 NCBI chr13:51,042,111...51,076,913
Ensembl chr13:51,042,248...51,076,852
JBrowse link
G Ager advanced glycosylation end product-specific receptor IEA
ISO
GO_REF:0000107
ComplexPortal:CPX-1134 (MGI:6094326|PMID:18367618)
UniProtKB:P05067 (PMID:15457210)
Ensembl
RGD
PMID:15457210, PMID:18367618 GO_REF:0000107, MGI:6094326 NCBI chr20:4,363,152...4,366,079
Ensembl chr20:4,363,152...4,366,079
JBrowse link
G Apoe apolipoprotein E ISO
IEA
(PMID:16273551)
GO_REF:0000107
RGD
Ensembl
PMID:16273551 GO_REF:0000107 NCBI chr 1:80,612,894...80,616,820
Ensembl chr 1:80,612,895...80,617,057
JBrowse link
G App amyloid beta precursor protein ISO ComplexPortal:CPX-1134|UniProtKB:Q15109|UniProtKB:Q61391 (PMID:15457210), (PMID:16636059), (PMID:19118188) RGD PMID:15457210, PMID:16636059, PMID:19118188 NCBI chr11:24,425,013...24,641,872
Ensembl chr11:24,425,005...24,641,858
JBrowse link
G Cx3cr1 C-X3-C motif chemokine receptor 1 IMP RGD PMID:23855980 RGD:9491766 NCBI chr 8:128,740,756...128,754,514
Ensembl chr 8:128,740,756...128,754,514
JBrowse link
G Epha4 Eph receptor A4 ISO ComplexPortal:CPX-1134|UniProtKB:P00520 (MGI:5588508|PMID:24658113) RGD PMID:24658113 MGI:5588508 NCBI chr 9:83,111,222...83,253,486
Ensembl chr 9:83,111,222...83,253,458
JBrowse link
G Fam107a family with sequence similarity 107, member A IEA
ISO
ISS
GO_REF:0000107
(MGI:6162291|PMID:21969592)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:21969592 GO_REF:0000024, GO_REF:0000107, MGI:6162291 NCBI chr15:18,399,145...18,415,959
Ensembl chr15:18,399,515...18,415,965
JBrowse link
G Ppp1r9a protein phosphatase 1, regulatory subunit 9A IMP RGD PMID:16899074 RGD:10002752 NCBI chr 4:29,976,485...30,247,371
Ensembl chr 4:29,978,739...30,241,911
JBrowse link
G Prnp prion protein IDA PMID:21593310 ARUK-UCL PMID:21593310 RGD:12790639 NCBI chr 3:124,515,917...124,531,320
Ensembl chr 3:124,515,978...124,531,316
JBrowse link
G Ptn pleiotrophin ISS
ISO
GO_REF:0000024
(MGI:2136679|PMID:11414790), (MGI:2181835|PMID:12093164)
UniProt
RGD
PMID:11414790, PMID:12093164 GO_REF:0000024, MGI:2136679, MGI:2181835 NCBI chr 4:64,239,156...64,330,996
Ensembl chr 4:64,239,158...64,330,996
JBrowse link
G Tyrobp transmembrane immune signaling adaptor Tyrobp ISO (MGI:3531596|PMID:15601948) RGD PMID:15601948 MGI:3531596 NCBI chr 1:88,875,370...88,879,305
Ensembl chr 1:88,875,375...88,879,303
JBrowse link
positive regulation of long-term synaptic potentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adcy1 adenylate cyclase 1 ISO (MGI:1344240|PMID:10482244) RGD PMID:10482244 MGI:1344240 NCBI chr14:87,311,970...87,429,880
Ensembl chr14:87,312,203...87,421,659
JBrowse link
G Adcy8 adenylate cyclase 8 ISS
ISO
IEA
GO_REF:0000024
(MGI:1344240|PMID:10482244)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:10482244 GO_REF:0000024, GO_REF:0000107, MGI:1344240 NCBI chr 7:105,353,883...105,593,372
Ensembl chr 7:105,353,913...105,592,804
JBrowse link
G Adora2a adenosine A2a receptor IMP RGD PMID:14596853 RGD:1625717 NCBI chr20:14,265,251...14,282,873
Ensembl chr20:14,265,252...14,282,873
JBrowse link
G Adrb1 adrenoceptor beta 1 IDA RGD PMID:21848869 RGD:8693685 NCBI chr 1:277,537,585...277,538,985
Ensembl chr 1:277,537,585...277,538,985
JBrowse link
G Akap5 A-kinase anchoring protein 5 ISO (PMID:25589740) RGD PMID:25589740 NCBI chr 6:99,356,509...99,361,909
Ensembl chr 6:99,356,509...99,361,909
JBrowse link
G App amyloid beta precursor protein ISO ComplexPortal:CPX-1134|UniProtKB:P49582 (PMID:19118188), (PMID:20974225) RGD PMID:19118188, PMID:20974225 NCBI chr11:24,425,013...24,641,872
Ensembl chr11:24,425,005...24,641,858
JBrowse link
G Chrna7 cholinergic receptor nicotinic alpha 7 subunit IEA
ISO
GO_REF:0000107
ComplexPortal:CPX-1134|UniProtKB:P05067|UniProtKB:P05067:PRO_0000000092 (MGI:4889154|PMID:20974225), (MGI:5825427|PMID:19118188)
Ensembl
RGD
PMID:19118188, PMID:20974225 GO_REF:0000107, MGI:4889154, MGI:5825427 NCBI chr 1:123,897,341...124,039,263
Ensembl chr 1:123,899,657...124,039,196
JBrowse link
G Cpeb3 cytoplasmic polyadenylation element binding protein 3 ISO (MGI:5648736|PMID:26074003) RGD PMID:26074003 MGI:5648736 NCBI chr 1:255,660,165...255,842,671
Ensembl chr 1:255,665,238...255,815,733
JBrowse link
G Creb1 cAMP responsive element binding protein 1 IMP RGD PMID:16000619 RGD:10059422 NCBI chr 9:71,229,753...71,298,994
Ensembl chr 9:71,230,108...71,293,435
JBrowse link
G Crtc1 CREB regulated transcription coactivator 1 IMP RGD PMID:17183642 RGD:9685167 NCBI chr16:20,740,746...20,798,145
Ensembl chr16:20,740,826...20,794,039
JBrowse link
G Drd1 dopamine receptor D1 IMP RGD PMID:20377617 RGD:6907453 NCBI chr17:11,099,736...11,104,352
Ensembl chr17:11,101,306...11,103,541
JBrowse link
G Drd2 dopamine receptor D2 IMP RGD PMID:20377617 RGD:6907453 NCBI chr 8:53,678,777...53,743,643
Ensembl chr 8:53,678,777...53,743,642
JBrowse link
G Eif2ak4 eukaryotic translation initiation factor 2 alpha kinase 4 ISS
ISO
GO_REF:0000024
(MGI:3589053|PMID:16121183)
UniProt
RGD
PMID:16121183 GO_REF:0000024, MGI:3589053 NCBI chr 3:110,159,624...110,245,382
Ensembl chr 3:110,159,708...110,249,217
JBrowse link
G Ephb2 Eph receptor B2 ISO (MGI:4867584|PMID:21113149) RGD PMID:21113149 MGI:4867584 NCBI chr 5:155,024,478...155,143,539
Ensembl chr 5:155,022,493...155,204,456
JBrowse link
G Fmr1 FMRP translational regulator 1 IMP RGD PMID:28894415 RGD:38501107 NCBI chr  X:154,684,924...154,722,369
Ensembl chr  X:154,684,935...154,722,314
JBrowse link
G Hnrnpk heterogeneous nuclear ribonucleoprotein K IMP RGD PMID:24990929 RGD:10002784 NCBI chr17:6,664,730...6,676,753
Ensembl chr17:6,665,659...6,676,654
JBrowse link
G Igsf11 immunoglobulin superfamily, member 11 ISO (MGI:5790016|PMID:26595655) RGD PMID:26595655 MGI:5790016 NCBI chr11:64,286,691...64,421,248
Ensembl chr11:64,286,694...64,421,248
JBrowse link
G Kalrn kalirin, RhoGEF kinase ISO MGI:3831288 (MGI:5645427|PMID:25865668) RGD PMID:25865668 MGI:5645427 NCBI chr11:69,484,293...70,025,682
Ensembl chr11:69,484,293...70,025,633
JBrowse link
G Lgmn legumain IEA
ISO
GO_REF:0000107
UniProtKB:P10636 (MGI:5702834|PMID:25326800)
Ensembl
RGD
PMID:25326800 GO_REF:0000107, MGI:5702834 NCBI chr 6:126,282,246...126,308,207
Ensembl chr 6:126,282,233...126,320,726
JBrowse link
G Mme membrane metallo-endopeptidase ISO UniProtKB:P05067 (MGI:3689460|PMID:16636059) RGD PMID:16636059 MGI:3689460 NCBI chr 2:153,799,203...153,880,910
Ensembl chr 2:153,803,349...153,880,738
JBrowse link
G Nos1 nitric oxide synthase 1 IMP RGD PMID:23579428 RGD:7257653 NCBI chr12:44,214,949...44,405,530
Ensembl chr12:44,213,943...44,520,341
JBrowse link
G Nptn neuroplastin IMP RGD PMID:10759566 RGD:8553916 NCBI chr 8:63,379,062...63,445,694
Ensembl chr 8:63,379,087...63,445,686
JBrowse link
G Nrgn neurogranin IMP RGD PMID:7620629 RGD:9835395 NCBI chr 8:40,015,049...40,023,193
Ensembl chr 8:40,015,049...40,023,193
JBrowse link
G Ptpn5 protein tyrosine phosphatase, non-receptor type 5 IMP RGD PMID:19026408 RGD:9835020 NCBI chr 1:103,197,918...103,258,309
Ensembl chr 1:103,197,915...103,256,823
JBrowse link
G Reln reelin IEA
ISO
GO_REF:0000107
(MGI:5426130|PMID:21852430)
Ensembl
RGD
PMID:21852430 GO_REF:0000107, MGI:5426130 NCBI chr 4:9,347,533...9,774,257
Ensembl chr 4:9,347,528...9,773,670
JBrowse link
G Shank3 SH3 and multiple ankyrin repeat domains 3 ISS
ISO
IEA
GO_REF:0000024
(MGI:5285139|PMID:21167025)
GO_REF:0000107
BHF-UCL
RGD
Ensembl
PMID:21167025 GO_REF:0000024, GO_REF:0000107, MGI:5285139 NCBI chr 7:130,474,278...130,534,679
Ensembl chr 7:130,474,279...130,534,679
JBrowse link
G Shisa7 shisa family member 7 ISO (MGI:6110888|PMID:29199957) RGD PMID:29199957 MGI:6110888 NCBI chr 1:72,545,413...72,564,513
Ensembl chr 1:72,545,596...72,564,513
JBrowse link
G Sqstm1 sequestosome 1 ISO (MGI:5908340|PMID:19004011) RGD PMID:19004011 MGI:5908340 NCBI chr10:35,704,728...35,716,316
Ensembl chr10:35,704,730...35,716,294
JBrowse link
G Stau1 staufen double-stranded RNA binding protein 1 IMP RGD PMID:21508097 RGD:10043164 NCBI chr 3:163,703,204...163,748,996
Ensembl chr 3:163,703,204...163,748,996
JBrowse link
G Zdhhc2 zinc finger DHHC-type palmitoyltransferase 2 IMP PMID:25589740 UniProt PMID:25589740 RGD:21201275 NCBI chr16:54,932,546...55,002,322
Ensembl chr16:54,934,056...55,002,322
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20030
    biological regulation 13774
      regulation of biological quality 4273
        regulation of synaptic plasticity 342
          regulation of long-term synaptic potentiation 55
            negative regulation of long-term synaptic potentiation 12
            positive regulation of long-term synaptic potentiation 30
Path 2
Term Annotations click to browse term
  biological_process 20030
    cellular process 18802
      cell communication 7662
        cell-cell signaling 1727
          synaptic signaling 918
            trans-synaptic signaling 890
              anterograde trans-synaptic signaling 881
                chemical synaptic transmission 881
                  modulation of chemical synaptic transmission 655
                    regulation of synaptic plasticity 342
                      long-term synaptic potentiation 208
                        regulation of long-term synaptic potentiation 55
                          negative regulation of long-term synaptic potentiation 12
                          positive regulation of long-term synaptic potentiation 30
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.