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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of secondary metabolite biosynthetic process
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Accession:GO:1900376 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of secondary metabolite biosynthetic process.
Synonyms:exact_synonym: regulation of secondary metabolite biosynthesis


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negative regulation of melanin biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mfsd12 major facilitator superfamily domain containing 12 JBrowse link 7 11,214,832 11,223,713 RGD:1600115
G Rapgef2 Rap guanine nucleotide exchange factor 2 JBrowse link 2 177,836,191 178,057,378 RGD:1624291
RGD:1600115
G Slc24a5 solute carrier family 24 member 5 JBrowse link 3 117,335,212 117,354,480 RGD:1624291
G Wnt5a Wnt family member 5A JBrowse link 16 4,469,451 4,490,271 RGD:1624291
RGD:1600115
positive regulation of hydrogen sulfide biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Sp1 Sp1 transcription factor JBrowse link 7 144,014,173 144,044,635 RGD:1624291
positive regulation of melanin biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Appl1 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1 JBrowse link 16 2,560,103 2,602,035 RGD:1624291
G Asip agouti signaling protein JBrowse link 3 150,492,010 150,579,870 RGD:1624291
G Cdh3 cadherin 3 JBrowse link 19 38,668,957 38,719,801 RGD:1624291
G Gipc1 GIPC PDZ domain containing family, member 1 JBrowse link 19 24,786,604 24,798,231 RGD:1600115
RGD:1624291
G Pmel premelanosome protein JBrowse link 7 3,133,347 3,143,827 RGD:1624291
G Tyrp1 tyrosinase-related protein 1 JBrowse link 5 98,387,291 98,406,083 RGD:1624291
regulation of melanin biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Slc7a11 solute carrier family 7 member 11 JBrowse link 2 139,453,774 139,528,479 RGD:1624291

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19332
    metabolic process 11554
      biosynthetic process 5934
        regulation of biosynthetic process 4000
          regulation of secondary metabolite biosynthetic process 12
            negative regulation of secondary metabolite biosynthetic process + 4
            positive regulation of secondary metabolite biosynthetic process + 7
            regulation of (+)-kotanin biosynthetic process + 0
            regulation of N',N'',N'''-triacetylfusarinine C biosynthetic process + 0
            regulation of aflatoxin biosynthetic process + 0
            regulation of arugosin biosynthetic process + 0
            regulation of asperthecin biosynthetic process + 0
            regulation of brevianamide F biosynthetic process + 0
            regulation of cordyol C biosynthetic process + 0
            regulation of dehydroaustinol biosynthetic process + 0
            regulation of demethylkotanin biosynthetic process + 0
            regulation of diorcinol biosynthetic process + 0
            regulation of emericellamide biosynthetic process + 0
            regulation of emericellin biosynthetic process + 0
            regulation of emodin biosynthetic process + 0
            regulation of endocrocin biosynthetic process + 0
            regulation of ergot alkaloid biosynthetic process + 0
            regulation of fumitremorgin B biosynthetic process + 0
            regulation of fumonisin biosynthetic process + 0
            regulation of gerfelin biosynthetic process + 0
            regulation of gliotoxin biosynthetic process + 0
            regulation of glucosinolate biosynthetic process 0
            regulation of helvolic acid biosynthetic process + 0
            regulation of hydrogen sulfide biosynthetic process + 1
            regulation of lignin biosynthetic process + 0
            regulation of melanin biosynthetic process + 11
            regulation of monodictyphenone biosynthetic process + 0
            regulation of o-orsellinic acid biosynthetic process + 0
            regulation of orcinol biosynthetic process + 0
            regulation of penicillin biosynthetic process + 0
            regulation of phytoalexin biosynthetic process + 0
            regulation of polyketide biosynthetic process + 0
            regulation of proanthocyanidin biosynthetic process 0
            regulation of pyocyanine biosynthetic process + 0
            regulation of siderophore biosynthetic process + 0
            regulation of sinapate ester biosynthetic process + 0
            regulation of sterigmatocystin biosynthetic process + 0
            regulation of tensidol A biosynthetic process + 0
            regulation of tensidol B biosynthetic process + 0
            regulation of terrequinone A biosynthetic process + 0
            regulation of violaceol I biosynthetic process + 0
            regulation of violaceol II biosynthetic process + 0
Path 2
Term Annotations click to browse term
  biological_process 19332
    biological regulation 13335
      regulation of biological process 12650
        regulation of metabolic process 6536
          regulation of secondary metabolic process 16
            regulation of secondary metabolite biosynthetic process 12
              negative regulation of secondary metabolite biosynthetic process + 4
              positive regulation of secondary metabolite biosynthetic process + 7
              regulation of (+)-kotanin biosynthetic process + 0
              regulation of N',N'',N'''-triacetylfusarinine C biosynthetic process + 0
              regulation of aflatoxin biosynthetic process + 0
              regulation of arugosin biosynthetic process + 0
              regulation of asperthecin biosynthetic process + 0
              regulation of brevianamide F biosynthetic process + 0
              regulation of cordyol C biosynthetic process + 0
              regulation of dehydroaustinol biosynthetic process + 0
              regulation of demethylkotanin biosynthetic process + 0
              regulation of diorcinol biosynthetic process + 0
              regulation of emericellamide biosynthetic process + 0
              regulation of emericellin biosynthetic process + 0
              regulation of emodin biosynthetic process + 0
              regulation of endocrocin biosynthetic process + 0
              regulation of ergot alkaloid biosynthetic process + 0
              regulation of fumitremorgin B biosynthetic process + 0
              regulation of fumonisin biosynthetic process + 0
              regulation of gerfelin biosynthetic process + 0
              regulation of gliotoxin biosynthetic process + 0
              regulation of glucosinolate biosynthetic process 0
              regulation of helvolic acid biosynthetic process + 0
              regulation of hydrogen sulfide biosynthetic process + 1
              regulation of lignin biosynthetic process + 0
              regulation of melanin biosynthetic process + 11
              regulation of monodictyphenone biosynthetic process + 0
              regulation of o-orsellinic acid biosynthetic process + 0
              regulation of orcinol biosynthetic process + 0
              regulation of penicillin biosynthetic process + 0
              regulation of phytoalexin biosynthetic process + 0
              regulation of polyketide biosynthetic process + 0
              regulation of proanthocyanidin biosynthetic process 0
              regulation of pyocyanine biosynthetic process + 0
              regulation of siderophore biosynthetic process + 0
              regulation of sinapate ester biosynthetic process + 0
              regulation of sterigmatocystin biosynthetic process + 0
              regulation of tensidol A biosynthetic process + 0
              regulation of tensidol B biosynthetic process + 0
              regulation of terrequinone A biosynthetic process + 0
              regulation of violaceol I biosynthetic process + 0
              regulation of violaceol II biosynthetic process + 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.