Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:glucosamine-containing compound metabolic process
go back to main search page
Accession:GO:1901071 term browser browse the term
Definition:The chemical reactions and pathways involving glucosamine-containing compounds (glucosamines).
Synonyms:exact_synonym: glucosamine-containing compound metabolism;   glucosamines metabolic process;   glucosamines metabolism


show annotations for term's descendants           Sort by:
 
catabolism by host of symbiont cell wall chitin term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chia chitinase, acidic IEA
ISO
GO_REF:0000107
(MGI:MGI:1931335|PMID:11085997)
Ensembl
RGD
PMID:11085997 GO_REF:0000107, MGI:MGI:1931335 NCBI chr 2:208,750,348...208,797,388
Ensembl chr 2:208,749,996...208,797,402
JBrowse link
chitin catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chi3l1 chitinase 3 like 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:51,022,844...51,030,797
Ensembl chr13:51,022,681...51,030,802
JBrowse link
G Chi3l3 chitinase 3-like 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:208,899,871...208,936,858
Ensembl chr 2:208,900,103...208,936,860
JBrowse link
G Chia chitinase, acidic IDA
IBA
ISO
ISS
PMID:21873635
(MGI:MGI:1931335|PMID:11085997)
GO_REF:0000024
(PMID:19435888)
RGD
UniProt
PMID:11085997, PMID:19435888, PMID:11085997, PMID:21873635 GO_REF:0000024, MGI:MGI:1931335, RGD:5000759, RGD:13792537 NCBI chr 2:208,750,348...208,797,388
Ensembl chr 2:208,749,996...208,797,402
JBrowse link
G Chit1 chitinase 1 ISO
IBA
(PMID:19725875)
PMID:21873635
RGD PMID:19725875, PMID:21873635 RGD:13792537 NCBI chr13:50,947,020...50,994,644
Ensembl chr13:50,974,872...50,994,643
JBrowse link
G Ctbs chitobiase IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:2751306, PMID:21873635 RGD:2301430, RGD:13792537 NCBI chr 2:252,305,874...252,320,387
Ensembl chr 2:252,305,874...252,320,387
JBrowse link
G RGD1309110 similar to Hypothetical protein MGC58999 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:208,982,251...209,004,270
Ensembl chr 2:208,983,520...209,001,895
JBrowse link
glucosamine biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gfpt1 glutamine fructose-6-phosphate transaminase 1 IDA RGD PMID:10898949 RGD:1625426 NCBI chr 4:118,852,046...118,901,583
Ensembl chr 4:118,852,062...118,901,591
JBrowse link
glucosamine catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gnpda1 glucosamine-6-phosphate deaminase 1 ISO
IBA
(PMID:9438414)
PMID:21873635
RGD PMID:9438414, PMID:21873635 RGD:13792537 NCBI chr18:31,479,117...31,489,154
Ensembl chr18:31,479,117...31,487,671
JBrowse link
G Gnpda2 glucosamine-6-phosphate deaminase 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:62,628,102...62,646,158
Ensembl chr14:62,628,111...62,646,110
JBrowse link
glucosamine metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gnpnat1 glucosamine-phosphate N-acetyltransferase 1 IDA RGD PMID:3792612 RGD:2311686 NCBI chr15:19,721,292...19,734,032
Ensembl chr15:19,721,293...19,733,967
JBrowse link
G Ogt O-linked N-acetylglucosamine (GlcNAc) transferase IDA
IMP
RGD PMID:12054585, PMID:18539296 RGD:9590171, RGD:9590185 NCBI chr  X:71,540,870...71,585,906
Ensembl chr  X:71,528,988...71,585,908
JBrowse link
N-acetylglucosamine biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gne glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 5:59,511,738...59,553,421
Ensembl chr 5:59,512,872...59,553,416
JBrowse link
G Nanp N-acetylneuraminic acid phosphatase IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 3:146,800,018...146,812,988
Ensembl chr 3:146,800,019...146,812,989
JBrowse link
N-acetylglucosamine catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amdhd2 amidohydrolase domain containing 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:13,528,400...13,536,949
Ensembl chr10:13,528,413...13,536,899
JBrowse link
G Gnpda1 glucosamine-6-phosphate deaminase 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:31,479,117...31,489,154
Ensembl chr18:31,479,117...31,487,671
JBrowse link
G Gnpda2 glucosamine-6-phosphate deaminase 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:62,628,102...62,646,158
Ensembl chr14:62,628,111...62,646,110
JBrowse link
N-acetylglucosamine metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chst1 carbohydrate sulfotransferase 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:81,441,785...81,512,829
Ensembl chr 3:81,498,022...81,512,807
JBrowse link
G Chst2 carbohydrate sulfotransferase 2 ISO
IBA
(PMID:9722682)
PMID:21873635
RGD PMID:9722682, PMID:21873635 RGD:13792537 NCBI chr 8:103,186,759...103,190,612
Ensembl chr 8:103,188,651...103,190,243
JBrowse link
G Chst3 carbohydrate sulfotransferase 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:29,731,828...29,768,656
Ensembl chr20:29,731,816...29,738,506
JBrowse link
G Chst4 carbohydrate sulfotransferase 4 ISO
IBA
(PMID:10330415)
PMID:21873635
RGD PMID:10330415, PMID:21873635 RGD:13792537 NCBI chr19:41,630,060...41,642,373
Ensembl chr19:41,631,715...41,640,367
JBrowse link
G Chst5 carbohydrate sulfotransferase 5 ISO
IBA
(PMID:11352640)
PMID:21873635
(MGI:MGI:1934540|PMID:11278593), (MGI:MGI:3687902|PMID:12218059)
RGD PMID:11278593, PMID:11352640, PMID:12218059, PMID:21873635 MGI:MGI:1934540, MGI:MGI:3687902, RGD:13792537 NCBI chr19:44,115,065...44,136,092
Ensembl chr19:44,115,120...44,135,387
JBrowse link
G Chst7 carbohydrate sulfotransferase 7 ISO
IBA
(PMID:10913333)
PMID:21873635
RGD PMID:10913333, PMID:21873635 RGD:13792537 NCBI chr  X:2,623,018...2,657,155
Ensembl chr  X:2,623,024...2,657,155
JBrowse link
G Extl2 exostosin-like glycosyltransferase 2 ISO (MGI:MGI:5882911|PMID:12562774)
(PMID:10318803)
RGD PMID:10318803, PMID:12562774 MGI:MGI:5882911 NCBI chr 2:218,951,112...218,972,576
Ensembl chr 2:218,951,141...218,971,886
JBrowse link
G Gnpnat1 glucosamine-phosphate N-acetyltransferase 1 IDA RGD PMID:3792612 RGD:2311686 NCBI chr15:19,721,292...19,734,032
Ensembl chr15:19,721,293...19,733,967
JBrowse link
G Hexb hexosaminidase subunit beta IDA RGD PMID:1397486 RGD:1599434 NCBI chr 2:27,983,925...28,003,260
Ensembl chr 2:27,984,117...28,003,186
JBrowse link
G Mgat3 beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase ISO
IBA
(MGI:MGI:5613435|PMID:24619415)
PMID:21873635
RGD PMID:24619415, PMID:21873635 MGI:MGI:5613435, RGD:13792537 NCBI chr 7:121,394,541...121,436,935
Ensembl chr 7:121,408,829...121,435,022
JBrowse link
G Nagk N-acetylglucosamine kinase ISO (MGI:MGI:1859071|PMID:10824116) RGD PMID:10824116 MGI:MGI:1859071 NCBI chr 4:115,473,848...115,485,027
Ensembl chr 4:115,473,811...115,481,438
JBrowse link
G Oga O-GlcNAcase IMP
ISO
IEA
(PMID:11148210)
GO_REF:0000107
RGD
Ensembl
PMID:11148210, PMID:19139380 GO_REF:0000107, RGD:2305938 NCBI chr 1:265,506,752...265,542,452
Ensembl chr 1:265,507,451...265,542,276
JBrowse link
G Renbp renin binding protein IDA
IBA
ISO
PMID:21873635
MGI:MGI:2386397 (MGI:MGI:1858659|PMID:10809771)
RGD PMID:10809771, PMID:11726282, PMID:21873635 MGI:MGI:1858659, RGD:5132613, RGD:13792537 NCBI chr  X:156,854,490...156,863,548
Ensembl chr  X:156,854,594...156,863,528
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20017
    metabolic process 12256
      organic substance metabolic process 11636
        carbohydrate derivative metabolic process 1030
          amino sugar metabolic process 40
            glucosamine-containing compound metabolic process 26
              N-acetylglucosamine metabolic process + 18
              chitin metabolic process + 6
              glucosamine metabolic process + 5
              glucosamine-containing compound biosynthetic process + 3
              glucosamine-containing compound catabolic process + 9
paths to the root

NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.