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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning
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Accession:GO:1901620 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of smoothened signaling pathway involved in dorsal/ventral neural tube patterning.
Synonyms:exact_synonym: regulation of hedgehog signaling pathway involved in dorsal/ventral neural tube patterning;   regulation of hh signaling pathway involved in dorsal/ventral neural tube patterning;   regulation of smoothened signalling pathway involved in dorsal/ventral neural tube patterning


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regulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdk20 cyclin-dependent kinase 20 ISO MGI:MGI:95728|MGI:MGI:95729 (MGI:MGI:5912686|PMID:28817564) RGD PMID:28817564 MGI:MGI:5912686 NCBI chr17:1,935,900...1,942,867
Ensembl chr17:1,936,163...1,942,865
JBrowse link
G Gli2 GLI family zinc finger 2 ISO MGI:MGI:2145349 (MGI:MGI:5912686|PMID:28817564) RGD PMID:28817564 MGI:MGI:5912686 NCBI chr13:34,829,021...35,049,172
Ensembl chr13:34,829,139...35,048,444
JBrowse link
G Gli3 GLI family zinc finger 3 ISO
IEA
MGI:MGI:2145349 (MGI:MGI:5912686|PMID:28817564)
GO_REF:0000107
RGD
Ensembl
PMID:28817564 GO_REF:0000107, MGI:MGI:5912686 NCBI chr17:52,294,942...52,569,036
Ensembl chr17:52,294,942...52,569,036
JBrowse link
G Mks1 MKS transition zone complex subunit 1 ISO
IEA
MGI:MGI:4887578 (MGI:MGI:4868517|PMID:21045211)
GO_REF:0000107
RGD
Ensembl
PMID:21045211 GO_REF:0000107, MGI:MGI:4868517 NCBI chr10:75,149,814...75,160,481
Ensembl chr10:75,149,814...75,160,480
JBrowse link
negative regulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdk20 cyclin-dependent kinase 20 ISO
IEA
MGI:MGI:108075|MGI:MGI:99833 (MGI:MGI:5912686|PMID:28817564)
GO_REF:0000107
RGD
Ensembl
PMID:28817564 GO_REF:0000107, MGI:MGI:5912686 NCBI chr17:1,935,900...1,942,867
Ensembl chr17:1,936,163...1,942,865
JBrowse link
G Gpr161 G protein-coupled receptor 161 ISO (MGI:MGI:5468365|PMID:23332756) RGD PMID:23332756 MGI:MGI:5468365 NCBI chr13:83,530,389...83,576,117
Ensembl chr13:83,531,018...83,571,505
JBrowse link
G Prkaca protein kinase cAMP-activated catalytic subunit alpha ISO
IEA
MGI:MGI:97760 (MGI:MGI:5308523|PMID:22007132)
GO_REF:0000107
RGD
Ensembl
PMID:22007132 GO_REF:0000107, MGI:MGI:5308523 NCBI chr19:25,095,089...25,118,869
Ensembl chr19:25,095,089...25,118,860
JBrowse link
G Prkacb protein kinase cAMP-activated catalytic subunit beta ISO MGI:MGI:97592 (MGI:MGI:5308523|PMID:22007132) RGD PMID:22007132 MGI:MGI:5308523 NCBI chr 2:252,602,197...252,691,886
Ensembl chr 2:252,605,307...252,691,886
JBrowse link
G Sufu SUFU negative regulator of hedgehog signaling ISO MGI:MGI:4840420 (MGI:MGI:4355593|PMID:19684112) RGD PMID:19684112 MGI:MGI:4355593 NCBI chr 1:266,143,766...266,241,742
Ensembl chr 1:266,143,818...266,239,016
JBrowse link
G Traf3ip1 TRAF3 interacting protein 1 ISO MGI:MGI:4129326 (MGI:MGI:5298450|PMID:21945076) RGD PMID:21945076 MGI:MGI:5298450 NCBI chr 9:98,621,499...98,658,223
Ensembl chr 9:98,621,506...98,656,901
JBrowse link
G Tulp3 TUB like protein 3 ISO MGI:MGI:2388066 (MGI:MGI:3844764|PMID:19334287) RGD PMID:19334287 MGI:MGI:3844764 NCBI chr 4:161,636,084...161,677,807
Ensembl chr 4:161,637,892...161,658,519
JBrowse link
positive regulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gorab golgin, RAB6-interacting ISO (MGI:MGI:5766823|PMID:26967474) RGD PMID:26967474 MGI:MGI:5766823 NCBI chr13:81,682,207...81,698,827
Ensembl chr13:81,682,018...81,698,833
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20015
    regulation of biological process 13073
      regulation of signaling 3593
        regulation of signal transduction 2999
          regulation of smoothened signaling pathway 94
            regulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning 11
              negative regulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning 7
              positive regulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning 1
Path 2
Term Annotations click to browse term
  biological_process 20015
    developmental process 6813
      anatomical structure development 6257
        multicellular organism development 5736
          embryo development 1303
            embryo development ending in birth or egg hatching 859
              chordate embryonic development 843
                neural tube development 196
                  neural tube patterning 49
                    dorsal/ventral neural tube patterning 31
                      smoothened signaling pathway involved in dorsal/ventral neural tube patterning 15
                        regulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning 11
                          negative regulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning 7
                          positive regulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning 1
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.