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ONTOLOGY REPORT - ANNOTATIONS


Term:quinone biosynthetic process
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Accession:GO:1901663 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of quinone.
Synonyms:exact_synonym: quinone anabolism;   quinone biosynthesis;   quinone formation;   quinone synthesis
 related_synonym: quinone cofactor anabolism;   quinone cofactor biosynthesis;   quinone cofactor biosynthetic process;   quinone cofactor formation;   quinone cofactor synthesis
 alt_id: GO:0045426


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menaquinone biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ubiad1 UbiA prenyltransferase domain containing 1 JBrowse link 5 165,247,630 165,259,228 RGD:1600115
RGD:13792537
RGD:1624291
regulation of ubiquinone biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Coq3 coenzyme Q3 methyltransferase JBrowse link 5 36,024,673 36,056,664 RGD:69814
G Pptc7 protein phosphatase targeting COQ7 JBrowse link 12 39,731,107 39,769,480 RGD:1624291
ubiquinone biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Coq10a coenzyme Q10A JBrowse link 7 2,780,930 2,788,189 RGD:13792537
G Coq10b coenzyme Q10B JBrowse link 9 61,655,963 61,675,880 RGD:13792537
G Coq2 coenzyme Q2, polyprenyltransferase JBrowse link 14 10,581,102 10,601,093 RGD:1600115
RGD:13792537
RGD:1624291
G Coq3 coenzyme Q3 methyltransferase JBrowse link 5 36,024,673 36,056,664 RGD:1600115
RGD:1624291
G Coq4 coenzyme Q4 JBrowse link 3 8,349,386 8,357,719 RGD:1600115
G Coq5 coenzyme Q5, methyltransferase JBrowse link 12 47,078,753 47,095,438 RGD:1600115
RGD:1624291
G Coq6 coenzyme Q6 monooxygenase JBrowse link 6 108,076,393 108,087,782 RGD:1600115
RGD:13792537
G Coq7 coenzyme Q7, hydroxylase JBrowse link 1 188,176,060 188,190,874 RGD:69815
RGD:13792537
RGD:1624291
RGD:1600115
G Coq8a coenzyme Q8A JBrowse link 13 98,451,629 98,480,438 RGD:1600115
RGD:13792537
RGD:1624291
G Coq8b coenzyme Q8B JBrowse link 1 84,043,487 84,067,066 RGD:1624291
RGD:13792537
RGD:1600115
G Coq9 coenzyme Q9 JBrowse link 19 10,583,855 10,596,848 RGD:1600115
RGD:13792537
RGD:1624291
G Fdxr ferredoxin reductase JBrowse link 10 103,817,724 103,826,413 RGD:13792537
G Pdss1 decaprenyl diphosphate synthase subunit 1 JBrowse link 17 90,033,432 90,072,506 RGD:1624291
G Pdss2 decaprenyl diphosphate synthase subunit 2 JBrowse link 20 47,966,513 48,192,747 RGD:1624291
RGD:1600115
G Ubiad1 UbiA prenyltransferase domain containing 1 JBrowse link 5 165,247,630 165,259,228 RGD:1624291
RGD:1600115
ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ubiad1 UbiA prenyltransferase domain containing 1 JBrowse link 5 165,247,630 165,259,228 RGD:13792537
ubiquinone-6 biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ndufa9 NADH:ubiquinone oxidoreductase subunit A9 JBrowse link 4 159,371,263 159,399,636 RGD:13792537

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19334
    metabolic process 11555
      biosynthetic process 5934
        cellular biosynthetic process 5757
          ketone biosynthetic process 50
            quinone biosynthetic process 17
              actinorhodin biosynthetic process 0
              asperthecin biosynthetic process + 0
              averantin biosynthetic process 0
              daunorubicin biosynthetic process 0
              emodin biosynthetic process + 0
              endocrocin biosynthetic process + 0
              granaticin biosynthetic process 0
              menaquinone biosynthetic process 1
              mitomycin C biosynthetic process 0
              phylloquinone biosynthetic process 0
              plastoquinone biosynthetic process 0
              pyrroloquinoline quinone biosynthetic process 0
              terrequinone A biosynthetic process + 0
              ubiquinone biosynthetic process + 17
Path 2
Term Annotations click to browse term
  biological_process 19334
    cellular process 17238
      cellular metabolic process 10567
        cofactor metabolic process 412
          coenzyme metabolic process 226
            coenzyme biosynthetic process 117
              quinone biosynthetic process 17
                actinorhodin biosynthetic process 0
                asperthecin biosynthetic process + 0
                averantin biosynthetic process 0
                daunorubicin biosynthetic process 0
                emodin biosynthetic process + 0
                endocrocin biosynthetic process + 0
                granaticin biosynthetic process 0
                menaquinone biosynthetic process 1
                mitomycin C biosynthetic process 0
                phylloquinone biosynthetic process 0
                plastoquinone biosynthetic process 0
                pyrroloquinoline quinone biosynthetic process 0
                terrequinone A biosynthetic process + 0
                ubiquinone biosynthetic process + 17
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.