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ONTOLOGY REPORT - ANNOTATIONS


Term:negative regulation of pri-miRNA transcription by RNA polymerase II
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Accession:GO:1902894 term browser browse the term
Definition:Any process that stops, prevents or reduces the frequency, rate or extent of pri-miRNA transcription mediated by RNA polymerase II.
Synonyms:exact_synonym: down regulation of pri-miRNA transcription from RNA polymerase II promoter;   downregulation of pri-miRNA transcription from RNA polymerase II promoter;   negative regulation of pri-miRNA transcription from RNA polymerase II promoter
 narrow_synonym: inhibition of pri-miRNA transcription from RNA polymerase II promoter


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negative regulation of pri-miRNA transcription by RNA polymerase II term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G App amyloid beta precursor protein ISO (PMID:24827165), (PMID:25152461) RGD PMID:24827165, PMID:25152461 NCBI chr11:24,425,013...24,641,872
Ensembl chr11:24,425,005...24,641,858
JBrowse link
G Bmp4 bone morphogenetic protein 4 IEA
ISO
GO_REF:0000107
(PMID:28124060)
Ensembl
RGD
PMID:28124060 GO_REF:0000107 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
JBrowse link
G Gata6 GATA binding protein 6 IMP PMID:25950484 BHF-UCL PMID:25950484 RGD:11541106 NCBI chr18:2,415,821...2,447,087
Ensembl chr18:2,416,552...2,446,338
JBrowse link
G Hdac2 histone deacetylase 2 ISO UniProtKB:Q6NZM9 (MGI:MGI:5754467|PMID:24675724) RGD PMID:24675724 MGI:MGI:5754467 NCBI chr20:43,084,870...43,108,198
Ensembl chr20:43,084,870...43,108,198
JBrowse link
G Hdac4 histone deacetylase 4 ISO UniProtKB:P70288 (MGI:MGI:5754467|PMID:24675724) RGD PMID:24675724 MGI:MGI:5754467 NCBI chr 9:99,052,945...99,299,715
Ensembl chr 9:99,057,089...99,299,715
JBrowse link
G Lilrb4 leukocyte immunoglobulin like receptor B4 ISO (PMID:22387553) RGD PMID:22387553 NCBI chr 1:73,393,854...73,399,448
Ensembl chr 1:73,393,850...73,399,579
JBrowse link
G Nfatc3 nuclear factor of activated T-cells 3 ISO UniProtKB:Q14934 (PMID:23543060) RGD PMID:23543060 NCBI chr19:38,039,542...38,114,003
Ensembl chr19:38,039,564...38,114,003
JBrowse link
G Nfatc4 nuclear factor of activated T-cells 4 ISO UniProtKB:Q12968 (PMID:23543060) RGD PMID:23543060 NCBI chr15:34,493,163...34,502,238
Ensembl chr15:34,493,138...34,504,326
JBrowse link
G Nfib nuclear factor I/B ISO (PMID:18384814) RGD PMID:18384814 NCBI chr 5:100,436,343...100,647,962
Ensembl chr 5:100,439,082...100,647,727
JBrowse link
G Pdgfb platelet derived growth factor subunit B IEA
ISO
GO_REF:0000107
(PMID:26493107)
Ensembl
RGD
PMID:26493107 GO_REF:0000107 NCBI chr 7:121,215,458...121,233,092
Ensembl chr 7:121,214,628...121,232,741
JBrowse link
G Pou5f1 POU class 5 homeobox 1 ISO (PMID:19409607) RGD PMID:19409607 NCBI chr20:3,747,231...3,751,994
Ensembl chr20:3,747,221...3,751,994
JBrowse link
G Ppara peroxisome proliferator activated receptor alpha ISO (PMID:21636785) RGD PMID:21636785 NCBI chr 7:126,618,872...126,687,282
Ensembl chr 7:126,619,196...126,681,752
JBrowse link
G Ppard peroxisome proliferator-activated receptor delta ISO (MGI:MGI:5705218|PMID:20445066) RGD PMID:20445066 MGI:MGI:5705218 NCBI chr20:7,818,289...7,883,482
Ensembl chr20:7,818,289...7,885,333
JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit ISO (PMID:23878390) RGD PMID:23878390 NCBI chr 1:220,992,770...221,003,249
Ensembl chr 1:220,992,770...221,003,249
JBrowse link
G Sox9 SRY-box transcription factor 9 ISO (PMID:26687115) RGD PMID:26687115 NCBI chr10:101,288,528...101,294,030
Ensembl chr10:101,288,489...101,293,379
JBrowse link
G Srf serum response factor ISO (MGI:MGI:5688838|PMID:21303526) RGD PMID:21303526 MGI:MGI:5688838 NCBI chr 9:16,737,637...16,747,226
Ensembl chr 9:16,737,642...16,747,225
JBrowse link
G Tgfbr1 transforming growth factor, beta receptor 1 IMP PMID:21704009 BHF-UCL PMID:21704009 RGD:12792988 NCBI chr 5:63,056,071...63,119,635
Ensembl chr 5:63,050,758...63,119,635
JBrowse link
G Yy1 YY1 transcription factor ISO (MGI:MGI:5754467|PMID:24675724) RGD PMID:24675724 MGI:MGI:5754467 NCBI chr 6:132,702,443...132,726,848
Ensembl chr 6:132,702,448...132,727,046
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20028
    metabolic process 12271
      negative regulation of metabolic process 3311
        negative regulation of macromolecule metabolic process 3047
          negative regulation of gene expression 2169
            negative regulation of transcription, DNA-templated 1346
              negative regulation of transcription by RNA polymerase II 958
                negative regulation of pri-miRNA transcription by RNA polymerase II 18
Path 2
Term Annotations click to browse term
  biological_process 20028
    metabolic process 12271
      cellular metabolic process 11085
        cellular aromatic compound metabolic process 5715
          nucleobase-containing compound metabolic process 5489
            nucleic acid metabolic process 4985
              RNA metabolic process 4469
                RNA biosynthetic process 3477
                  nucleic acid-templated transcription 3463
                    regulation of nucleic acid-templated transcription 3336
                      regulation of transcription, DNA-templated 3287
                        regulation of transcription by RNA polymerase II 2417
                          regulation of pri-miRNA transcription by RNA polymerase II 58
                            negative regulation of pri-miRNA transcription by RNA polymerase II 18
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.