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ONTOLOGY REPORT - ANNOTATIONS


Term:organelle disassembly
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Accession:GO:1903008 term browser browse the term
Definition:The disaggregation of an organelle into its constituent components.
Synonyms:exact_synonym: organelle degradation


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organelle disassembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dyrk3 dual specificity tyrosine phosphorylation regulated kinase 3 JBrowse link 13 47,906,230 47,916,877 RGD:1600115
RGD:1624291
G Kif9 kinesin family member 9 JBrowse link 8 118,737,739 118,795,190 RGD:1624291
autophagy of mitochondrion term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AABR07048308.1 RGD:13792537
G AABR07072668.1 RGD:13792537
G AC135026.1 RGD:13792537
G Ambra1 autophagy and beclin 1 regulator 1 JBrowse link 3 80,634,470 80,830,068 RGD:1624291
G Atg12 autophagy related 12 JBrowse link 18 40,721,799 40,732,143 RGD:13792537
G Atg13 autophagy related 13 JBrowse link 3 80,580,549 80,614,554 RGD:13792537
G Atg2a autophagy related 2A JBrowse link 1 221,612,584 221,632,291 RGD:13792537
G Atg2b autophagy related 2B JBrowse link 6 129,449,451 129,519,599 RGD:13792537
G Atg3 autophagy related 3 JBrowse link 11 60,585,192 60,613,706 RGD:13792537
G Atg5 autophagy related 5 JBrowse link 20 49,301,783 49,393,147 RGD:1624291
RGD:13792537
RGD:1600115
G Atg7 autophagy related 7 JBrowse link 4 146,570,113 146,777,093 RGD:1624291
RGD:13792537
G Atg9a autophagy related 9A JBrowse link 9 82,382,800 82,393,429 RGD:13792537
G Atg9b autophagy related 9B JBrowse link 4 7,314,369 7,322,095 RGD:13792537
G Becn1 beclin 1 JBrowse link 10 89,209,944 89,225,297 RGD:1624291
G Capn10 calpain 10 JBrowse link 9 100,104,000 100,112,833 RGD:7247732
G Cdkn2a cyclin-dependent kinase inhibitor 2A JBrowse link 5 107,823,323 107,832,405 RGD:1624291
G Cisd2 CDGSH iron sulfur domain 2 JBrowse link 2 240,586,754 240,611,560 RGD:1624291
G Fbxo7 F-box protein 7 JBrowse link 7 23,815,246 23,843,505 RGD:1624291
RGD:1600115
G Fis1 fission, mitochondrial 1 JBrowse link 12 22,750,485 22,765,324 RGD:1624291
RGD:13792537
G Fundc1 FUN14 domain containing 1 JBrowse link X 5,549,468 5,566,125 RGD:1624291
RGD:13792537
RGD:1600115
G Fundc2 FUN14 domain containing 2 JBrowse link 18 401,878 407,954 RGD:13792537
G Gabarap GABA type A receptor-associated protein JBrowse link 10 56,601,288 56,604,223 RGD:13792537
G Gabarapl1 GABA type A receptor associated protein like 1 JBrowse link 4 163,293,724 163,302,866 RGD:13792537
G Gabarapl2 GABA type A receptor associated protein like 2 JBrowse link 19 44,164,935 44,175,771 RGD:13792537
G LOC100359937 GABA(A) receptor-associated protein-like 2-like JBrowse link 8 95,943,674 95,944,604 RGD:13792537
G LOC365778 similar to RIKEN cDNA 1700034I23 JBrowse link 2 127,776,103 127,778,350 RGD:13792537
G Map1lc3a microtubule-associated protein 1 light chain 3 alpha JBrowse link 3 150,801,289 150,802,935 RGD:1624291
RGD:13792537
G Map1lc3b microtubule-associated protein 1 light chain 3 beta JBrowse link 19 53,635,449 53,643,970 RGD:1624291
RGD:13792537
G Pink1 PTEN induced kinase 1 JBrowse link 5 156,677,146 156,689,258 RGD:1624291
RGD:13792537
G Ppargc1a PPARG coactivator 1 alpha JBrowse link 14 63,095,291 63,190,688 RGD:10059673
G Prkn parkin RBR E3 ubiquitin protein ligase JBrowse link 1 48,880,015 50,069,998 RGD:10047224
RGD:13792537
RGD:1624291
RGD:1600115
G Rb1cc1 RB1-inducible coiled-coil 1 JBrowse link 5 13,033,918 13,097,369 RGD:13792537
G Slc25a46 solute carrier family 25, member 46 JBrowse link 18 24,369,104 24,397,412 RGD:1624291
G Usp30 ubiquitin specific peptidase 30 JBrowse link 12 48,262,663 48,316,580 RGD:1624291
G Wdr45 WD repeat domain 45 JBrowse link X 15,621,249 15,627,159 RGD:13792537
G Wdr45b WD repeat domain 45B JBrowse link 10 110,523,843 110,555,769 RGD:13792537
G Wipi1 WD repeat domain, phosphoinositide interacting 1 JBrowse link 10 97,859,730 97,896,949 RGD:13792537
G Wipi2 WD repeat domain, phosphoinositide interacting 2 JBrowse link 12 13,969,704 13,998,134 RGD:13792537
axonemal microtubule depolymerization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Kif19 kinesin family member 19 JBrowse link 10 103,308,392 103,334,466 RGD:1624291
Golgi disassembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cdk1 cyclin-dependent kinase 1 JBrowse link 20 20,576,341 20,591,510 RGD:632911
G Gbf1 golgi brefeldin A resistant guanine nucleotide exchange factor 1 JBrowse link 1 265,904,616 266,033,107 RGD:1624291
G Golga2 golgin A2 JBrowse link 3 11,317,328 11,337,569 RGD:632911
G Plk3 polo-like kinase 3 JBrowse link 5 135,997,725 136,002,900 RGD:1600115
RGD:13792537
RGD:1624291
G Stx5 syntaxin 5 JBrowse link 1 224,939,497 224,955,658 RGD:1624291
G Vrk1 VRK serine/threonine kinase 1 JBrowse link 6 129,835,788 129,902,839 RGD:1624291
mitophagy term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ambra1 autophagy and beclin 1 regulator 1 JBrowse link 3 80,634,470 80,830,068 RGD:1624291
G Atg13 autophagy related 13 JBrowse link 3 80,580,549 80,614,554 RGD:1624291
RGD:13792537
G Atg14 autophagy related 14 JBrowse link 15 24,343,418 24,374,776 RGD:1624291
RGD:13792537
G Becn1 beclin 1 JBrowse link 10 89,209,944 89,225,297 RGD:1624291
G Prkn parkin RBR E3 ubiquitin protein ligase JBrowse link 1 48,880,015 50,069,998 RGD:1624291
G Sqstm1 sequestosome 1 JBrowse link 10 35,704,728 35,716,316 RGD:1624291
RGD:13792537
G Ulk1 unc-51 like autophagy activating kinase 1 JBrowse link 12 51,908,105 51,934,704 RGD:1624291
mitophagy by induced vacuole formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Spata18 spermatogenesis associated 18 JBrowse link 14 37,081,529 37,108,245 RGD:1600115
RGD:13792537
RGD:1624291
mitotic spindle disassembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Spast spastin JBrowse link 6 22,230,067 22,282,166 RGD:1624291
RGD:1600115
G Vcp valosin-containing protein JBrowse link 5 58,426,548 58,445,953 RGD:13792537
negative regulation of autophagy of mitochondrion term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pink1 PTEN induced kinase 1 JBrowse link 5 156,677,146 156,689,258 RGD:1624291
G Tspo translocator protein JBrowse link 7 124,460,358 124,470,610 RGD:1624291
negative regulation of mitophagy term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Clec16a C-type lectin domain containing 16A JBrowse link 10 5,002,196 5,196,914 RGD:1624291
G Rnf41 ring finger protein 41 JBrowse link 7 2,827,242 2,854,230 RGD:1624291
G Tigar TP53 induced glycolysis regulatory phosphatase JBrowse link 4 159,635,145 159,654,108 RGD:1624291
G Tp53 tumor protein p53 JBrowse link 10 56,186,299 56,198,449 RGD:1624291
G Usp30 ubiquitin specific peptidase 30 JBrowse link 12 48,262,663 48,316,580 RGD:13208875
negative regulation of mitophagy in response to mitochondrial depolarization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Htra2 HtrA serine peptidase 2 JBrowse link 4 113,883,671 113,886,833 RGD:1624291
negative regulation of parkin-mediated stimulation of mitophagy in response to mitochondrial depolarization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Vps13c vacuolar protein sorting 13 homolog C JBrowse link 8 73,682,814 73,843,290 RGD:1624291
RGD:1600115
parkin-mediated stimulation of mitophagy in response to mitochondrial depolarization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hdac6 histone deacetylase 6 JBrowse link X 15,295,372 15,316,673 RGD:1624291
G Mfn2 mitofusin 2 JBrowse link 5 164,684,244 164,715,414 RGD:1624291
G Optn optineurin JBrowse link 17 77,167,700 77,218,374 RGD:1600115
RGD:1624291
G Prkn parkin RBR E3 ubiquitin protein ligase JBrowse link 1 48,880,015 50,069,998 RGD:1624291
G Smurf1 SMAD specific E3 ubiquitin protein ligase 1 JBrowse link 12 11,433,815 11,526,465 RGD:1624291
positive regulation of autophagy of mitochondrion term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bnip3 BCL2 interacting protein 3 JBrowse link 1 211,248,098 211,265,282 RGD:11561968
G Fbxo7 F-box protein 7 JBrowse link 7 23,815,246 23,843,505 RGD:1624291
RGD:13792537
RGD:11536096
G Hif1a hypoxia inducible factor 1 subunit alpha JBrowse link 6 96,810,868 96,856,303 RGD:1624291
RGD:1600115
G Htt huntingtin JBrowse link 14 81,105,139 81,254,637 RGD:1600115
RGD:1624291
G Prkn parkin RBR E3 ubiquitin protein ligase JBrowse link 1 48,880,015 50,069,998 RGD:1624291
positive regulation of autophagy of mitochondrion in response to mitochondrial depolarization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atp5if1 ATP synthase inhibitory factor subunit 1 JBrowse link 5 150,719,570 150,723,287 RGD:1624291
G Gba glucosylceramidase beta JBrowse link 2 188,511,781 188,522,602 RGD:1624291
G Hk2 hexokinase 2 JBrowse link 4 113,559,396 113,609,897 RGD:1624291
G Mul1 mitochondrial E3 ubiquitin protein ligase 1 JBrowse link 5 156,855,105 156,864,517 RGD:1624291
G Pink1 PTEN induced kinase 1 JBrowse link 5 156,677,146 156,689,258 RGD:12904014
positive regulation of mitophagy term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Prkn parkin RBR E3 ubiquitin protein ligase JBrowse link 1 48,880,015 50,069,998 RGD:13432560
G Vps13d vacuolar protein sorting 13 homolog D JBrowse link 5 162,891,451 163,119,239 RGD:1624291
positive regulation of mitophagy in response to mitochondrial depolarization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cdc37 cell division cycle 37, HSP90 cochaperone JBrowse link 8 22,160,922 22,173,797 RGD:1624291
RGD:1600115
G Hdac6 histone deacetylase 6 JBrowse link X 15,295,372 15,316,673 RGD:1624291
G Huwe1 HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1 JBrowse link X 21,474,627 21,603,348 RGD:1600115
RGD:1624291
G Pink1 PTEN induced kinase 1 JBrowse link 5 156,677,146 156,689,258 RGD:1624291
G Prkn parkin RBR E3 ubiquitin protein ligase JBrowse link 1 48,880,015 50,069,998 RGD:1624291
G Tomm7 translocase of outer mitochondrial membrane 7 JBrowse link 4 7,835,949 7,842,790 RGD:1624291
regulation of autophagy of mitochondrion term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bnip3l BCL2 interacting protein 3 like JBrowse link 15 43,643,897 43,667,123 RGD:1624291
G Cttn cortactin JBrowse link 1
1
217,602,698
215,255,385
217,638,196
215,290,882
RGD:1624291
G Dnm1l dynamin 1-like JBrowse link 11 88,830,968 88,882,271 RGD:1624291
RGD:13792537
G Fbxw7 F-box and WD repeat domain containing 7 JBrowse link 2 184,230,191 184,309,805 RGD:1624291
G Gsk3a glycogen synthase kinase 3 alpha JBrowse link 1 82,097,244 82,108,238 RGD:1624291
G Parl presenilin associated, rhomboid-like JBrowse link 11 84,517,368 84,544,463 RGD:1624291
RGD:1600115
G Srebf1 sterol regulatory element binding transcription factor 1 JBrowse link 10 46,570,996 46,593,021 RGD:1624291
G Vdac1 voltage-dependent anion channel 1 JBrowse link 10 37,724,915 37,752,827 RGD:1624291
reticulophagy term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G LOC103689968 protein FAM134B JBrowse link 2 78,103,358 78,257,109 RGD:1600115
RGD:13792537
G LOC103690028 zinc finger protein 622 JBrowse link 2 78,261,699 78,276,942 RGD:1600115
G Rb1cc1 RB1-inducible coiled-coil 1 JBrowse link 5 13,033,918 13,097,369 RGD:13792537
RGD:1624291
G Retreg1 reticulophagy regulator 1 JBrowse link 2 78,391,921 78,401,569 RGD:1624291
RGD:1600115
RGD:13792537
G Sting1 stimulator of interferon response cGAMP interactor 1 JBrowse link 18 28,529,537 28,535,828 RGD:1600115
RGD:13792537
RGD:1624291
G Tex264 testis expressed 264 JBrowse link 8 115,360,706 115,388,299 RGD:1624291
ribosome disassembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Denr density regulated reinitiation and release factor JBrowse link 12 38,095,717 38,117,758 RGD:1624291
G Eif2d eukaryotic translation initiation factor 2D JBrowse link 13 47,935,138 47,958,459 RGD:1624291
G Gfm2 GTP dependent ribosome recycling factor mitochondrial 2 JBrowse link 2 27,949,195 27,984,045 RGD:1624291
RGD:13792537
RGD:1600115
G Mcts1 MCTS1, re-initiation and release factor JBrowse link X 124,894,269 124,906,129 RGD:1624291
G Mrrf mitochondrial ribosome recycling factor JBrowse link 3 15,463,884 15,520,621 RGD:1624291
G Mtif3 mitochondrial translational initiation factor 3 JBrowse link 12 9,846,355 9,857,548 RGD:1624291
RGD:13792537
G Pelo pelota mRNA surveillance and ribosome rescue factor JBrowse link 2 47,266,758 47,268,526 RGD:13792537
stress granule disassembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dyrk3 dual specificity tyrosine phosphorylation regulated kinase 3 JBrowse link 13 47,906,230 47,916,877 RGD:1600115
RGD:13792537
RGD:1624291
G Kif5b kinesin family member 5B JBrowse link 17 54,181,416 54,219,048 RGD:1624291
G Klc1 kinesin light chain 1 JBrowse link 6 136,330,151 136,373,716 RGD:1624291
G Vcp valosin-containing protein JBrowse link 5 58,426,548 58,445,953 RGD:1600115
RGD:1624291
G Zfand1 zinc finger AN1-type containing 1 JBrowse link 2 93,656,895 93,666,745 RGD:1624291

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19576
    cellular process 18361
      cellular component organization or biogenesis 6480
        cellular component organization 6257
          cellular component disassembly 404
            organelle disassembly 98
              Golgi disassembly 6
              P granule disassembly 0
              chloroplast disassembly 0
              cilium disassembly + 1
              endoplasmic reticulum disassembly 0
              kinetochore disassembly 0
              lipid droplet disassembly 0
              mitochondrion disassembly + 72
              nucleus disassembly 0
              peroxisomal membrane disassembly 0
              peroxisome disassembly 0
              reticulophagy 6
              ribosome disassembly 7
              septin ring disassembly 0
              spindle disassembly + 2
              stress granule disassembly 5
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.