ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of cytoplasmic transport
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Accession:GO:1903649 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of cytoplasmic transport.
Synonyms:narrow_synonym: regulation of cytoplasmic streaming


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negative regulation of early endosome to late endosome transport term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Snx12 sorting nexin 12 JBrowse link X 70,989,822 71,127,330 RGD:1624291
RGD:1600115
G Snx3 sorting nexin 3 JBrowse link 20 47,225,382 47,263,390 RGD:1624291
positive regulation of anterograde dense core granule transport term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Map2 microtubule-associated protein 2 JBrowse link 9 73,204,753 73,462,965 RGD:13514087
G Mecp2 methyl CpG binding protein 2 JBrowse link X 156,650,389 156,713,813 RGD:12790715
G Trim46 tripartite motif-containing 46 JBrowse link 2 188,548,608 188,561,617 RGD:13514087
positive regulation of early endosome to late endosome transport term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dab2 DAB adaptor protein 2 JBrowse link 2 55,747,353 55,768,848 RGD:1600115
RGD:1624291
G Ezr ezrin JBrowse link 1 47,287,872 47,331,412 RGD:1624291
RGD:1600115
G Msn moesin JBrowse link X 65,226,834 65,294,192 RGD:1600115
RGD:1624291
G Mtmr2 myotubularin related protein 2 JBrowse link 8 12,283,471 12,334,014 RGD:8553482
G Ptpn23 protein tyrosine phosphatase, non-receptor type 23 JBrowse link 8 118,628,777 118,651,238 RGD:1600115
RGD:1624291
G Rab21 RAB21, member RAS oncogene family JBrowse link 7 58,261,985 58,286,770 RGD:1624291
RGD:1600115
G Rdx radixin JBrowse link 8 56,570,728 56,612,851 RGD:1624291
RGD:1600115
G Vps11 VPS11 core subunit of CORVET and HOPS complexes JBrowse link 8 48,677,492 48,692,295 RGD:1624291
positive regulation of early endosome to recycling endosome transport term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Sorl1 sortilin related receptor 1 JBrowse link 8 46,228,077 46,287,171 RGD:1624291
positive regulation of retrograde dense core granule transport term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mecp2 methyl CpG binding protein 2 JBrowse link X 156,650,389 156,713,813 RGD:12790715
positive regulation of retrograde transport, endosome to Golgi term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Eipr1 EARP complex and GARP complex interacting protein 1 JBrowse link 6 48,021,771 48,135,241 RGD:1600115
RGD:1624291
regulation of early endosome to late endosome transport term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Chmp3 charged multivesicular body protein 3 JBrowse link 4 99,449,213 99,496,156 RGD:1624291
G Dnajc13 DnaJ heat shock protein family (Hsp40) member C13 JBrowse link 8 112,697,907 112,830,445 RGD:1624291
RGD:1600115
G Map2k1 mitogen activated protein kinase kinase 1 JBrowse link 8 69,134,218 69,722,573 RGD:8553538
G Map2k2 mitogen activated protein kinase kinase 2 JBrowse link 7 11,458,971 11,478,520 RGD:8553538
G Mapk1 mitogen activated protein kinase 1 JBrowse link 11 88,203,863 88,273,301 RGD:8553538
G Mapk3 mitogen activated protein kinase 3 JBrowse link 1 198,192,773 198,198,975 RGD:8553538
G Sh3glb1 SH3 domain -containing GRB2-like endophilin B1 JBrowse link 2 250,709,812 250,744,216 RGD:13504749
G Src SRC proto-oncogene, non-receptor tyrosine kinase JBrowse link 3 153,547,807 153,595,643 RGD:1624291
RGD:1600115
regulation of early endosome to recycling endosome transport term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dnajc13 DnaJ heat shock protein family (Hsp40) member C13 JBrowse link 8 112,697,907 112,830,445 RGD:1624291
RGD:1600115
regulation of retrograde transport, endosome to Golgi term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Lrrk2 leucine-rich repeat kinase 2 JBrowse link 7 132,857,311 133,018,549 RGD:1624291
RGD:13792537
G Rab29 RAB29, member RAS oncogene family JBrowse link 13 48,644,575 48,650,229 RGD:8553873

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17895
    localization 5951
      cellular localization 2643
        intracellular transport 1556
          cytosolic transport 152
            regulation of cytoplasmic transport 25
              modulation by virus of host cytoplasmic transport 0
              negative regulation of cytoplasmic transport + 2
              positive regulation of cytoplasmic transport + 13
              regulation of dense core granule transport + 3
              regulation of early endosome to late endosome transport + 18
              regulation of early endosome to recycling endosome transport + 2
              regulation of retrograde transport, endosome to Golgi + 3
Path 2
Term Annotations click to browse term
  biological_process 17895
    localization 5951
      establishment of localization 4561
        transport 4425
          intracellular transport 1556
            cytosolic transport 152
              regulation of cytoplasmic transport 25
                modulation by virus of host cytoplasmic transport 0
                negative regulation of cytoplasmic transport + 2
                positive regulation of cytoplasmic transport + 13
                regulation of dense core granule transport + 3
                regulation of early endosome to late endosome transport + 18
                regulation of early endosome to recycling endosome transport + 2
                regulation of retrograde transport, endosome to Golgi + 3
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.