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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of cytoplasmic transport
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Accession:GO:1903649 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of cytoplasmic transport.
Synonyms:narrow_synonym: regulation of cytoplasmic streaming


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negative regulation of early endosome to late endosome transport term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Snx12 sorting nexin 12 JBrowse link X 101,089,367 101,222,583 RGD:2290270
G Snx3 sorting nexin 3 JBrowse link 10 42,502,054 42,535,369 RGD:2290270
positive regulation of anterograde dense core granule transport term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Map2 microtubule-associated protein 2 JBrowse link 1 66,175,202 66,442,583 RGD:2290270
G Mecp2 methyl CpG binding protein 2 JBrowse link X 74,026,592 74,085,690 RGD:2290270
G Trim46 tripartite motif-containing 46 JBrowse link 3 89,234,169 89,246,358 RGD:2290270
positive regulation of dense core granule transport term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Eipr1 EARP complex and GARP complex interacting protein 1 JBrowse link 12 28,751,802 28,867,494 RGD:2290270
positive regulation of early endosome to late endosome transport term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dab2 disabled 2, mitogen-responsive phosphoprotein JBrowse link 15 6,299,788 6,440,715 RGD:2290270
G Ezr ezrin JBrowse link 17 6,738,131 6,782,780 RGD:2290270
G Msn moesin JBrowse link X 96,096,045 96,168,553 RGD:2290270
G Mtmr2 myotubularin related protein 2 JBrowse link 9 13,747,260 13,808,896 RGD:2290270
G Ptpn23 protein tyrosine phosphatase, non-receptor type 23 JBrowse link 9 110,385,084 110,408,210 RGD:2290270
G Rab21 RAB21, member RAS oncogene family JBrowse link 10 115,289,862 115,317,419 RGD:2290270
G Rdx radixin JBrowse link 9 52,047,150 52,088,738 RGD:2290270
G Vps11 VPS11, CORVET/HOPS core subunit JBrowse link 9 44,347,749 44,361,673 RGD:2290270
positive regulation of early endosome to recycling endosome transport term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Sorl1 sortilin-related receptor, LDLR class A repeats-containing JBrowse link 9 41,964,709 42,124,297 RGD:2290270
positive regulation of retrograde dense core granule transport term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mecp2 methyl CpG binding protein 2 JBrowse link X 74,026,592 74,085,690 RGD:2290270
positive regulation of retrograde transport, endosome to Golgi term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Eipr1 EARP complex and GARP complex interacting protein 1 JBrowse link 12 28,751,802 28,867,494 RGD:2290270
regulation of early endosome to late endosome transport term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Chmp3 charged multivesicular body protein 3 JBrowse link 6 71,543,831 71,582,609 RGD:2290270
G Dnajc13 DnaJ heat shock protein family (Hsp40) member C13 JBrowse link 9 104,151,597 104,263,608 RGD:2290270
G Fam45a family with sequence similarity 45, member A JBrowse link 19 60,811,555 60,836,235 RGD:2290270
G Map2k1 mitogen-activated protein kinase kinase 1 JBrowse link 9 64,185,769 64,253,605 RGD:2290270
G Map2k2 mitogen-activated protein kinase kinase 2 JBrowse link 10 81,105,913 81,124,697 RGD:2290270
G Mapk1 mitogen-activated protein kinase 1 JBrowse link 16 16,983,382 17,047,453 RGD:2290270
G Mapk3 mitogen-activated protein kinase 3 JBrowse link 7 126,759,626 126,765,816 RGD:2290270
G Sh3glb1 SH3-domain GRB2-like B1 (endophilin) JBrowse link 3 144,683,678 144,720,556 RGD:2290270
G Src Rous sarcoma oncogene JBrowse link 2 157,423,906 157,471,838 RGD:2290270
regulation of early endosome to recycling endosome transport term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dnajc13 DnaJ heat shock protein family (Hsp40) member C13 JBrowse link 9 104,151,597 104,263,608 RGD:2290270
regulation of retrograde transport, endosome to Golgi term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Lrrk2 leucine-rich repeat kinase 2 JBrowse link 15 91,672,791 91,816,124 RGD:2290270
G Rab29 RAB29, member RAS oncogene family JBrowse link 1 131,867,210 131,872,887 RGD:2290270

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 23109
    regulation of biological process 11611
      regulation of localization 2868
        regulation of transport 1964
          regulation of intracellular transport 341
            regulation of cytoplasmic transport 26
              modulation by virus of host cytoplasmic transport 0
              negative regulation of cytoplasmic transport + 2
              positive regulation of cytoplasmic transport + 13
              regulation of dense core granule transport + 4
              regulation of early endosome to late endosome transport + 19
              regulation of early endosome to recycling endosome transport + 2
              regulation of retrograde transport, endosome to Golgi + 3
Path 2
Term Annotations click to browse term
  biological_process 23109
    localization 6027
      establishment of localization 4609
        transport 4473
          intracellular transport 1399
            regulation of intracellular transport 341
              regulation of cytoplasmic transport 26
                modulation by virus of host cytoplasmic transport 0
                negative regulation of cytoplasmic transport + 2
                positive regulation of cytoplasmic transport + 13
                regulation of dense core granule transport + 4
                regulation of early endosome to late endosome transport + 19
                regulation of early endosome to recycling endosome transport + 2
                regulation of retrograde transport, endosome to Golgi + 3
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.