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ONTOLOGY REPORT - ANNOTATIONS


Term:positive regulation of viral life cycle
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Accession:GO:1903902 term browser browse the term
Definition:Any process that activates or increases the frequency, rate or extent of viral life cycle.
Synonyms:exact_synonym: up regulation of viral life cycle;   upregulation of viral life cycle
 narrow_synonym: activation of viral assembly, maturation, egress, and release;   activation of viral life cycle;   positive regulation of viral assembly, maturation, egress, and release;   up regulation of viral assembly, maturation, egress, and release;   upregulation of viral assembly, maturation, egress, and release
 related_synonym: activation of lytic viral life cycle;   activation of viral infectious cycle;   activation of viral replication;   positive regulation of lytic viral life cycle;   positive regulation of viral infectious cycle;   positive regulation of viral replication;   up regulation of lytic viral life cycle;   up regulation of viral infectious cycle;   up regulation of viral replication;   upregulation of lytic viral life cycle;   upregulation of viral infectious cycle;   upregulation of viral replication


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positive regulation of viral life cycle term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anxa2 annexin A2 ISO (PMID:25593157) RGD PMID:25593157 NCBI chr 8:75,687,134...75,723,589
Ensembl chr 8:75,687,100...75,723,594
JBrowse link
G Kpna2 karyopherin subunit alpha 2 ISO (MGI:MGI:5898166|PMID:28189564)
(PMID:28189564)
RGD PMID:28189564 MGI:MGI:5898166 NCBI chr10:95,200,029...95,212,111
Ensembl chr10:95,200,030...95,212,111
JBrowse link
G Kpna6 karyopherin subunit alpha 6 ISO MGI:MGI:3856636 (MGI:MGI:5898166|PMID:28189564)
(PMID:28189564)
RGD PMID:28189564 MGI:MGI:5898166 NCBI chr 5:147,852,738...147,867,600
Ensembl chr 5:147,850,275...147,886,615
JBrowse link
G Vps4a vacuolar protein sorting 4 homolog A ISO (PMID:11595185), (PMID:16193069), (PMID:17940959) RGD PMID:11595185, PMID:16193069, PMID:17940959 NCBI chr19:39,230,050...39,243,298
Ensembl chr19:39,229,754...39,243,496
JBrowse link
G Vps4b vacuolar protein sorting 4 homolog B ISO (PMID:16193069) RGD PMID:16193069 NCBI chr13:26,825,261...26,850,460
Ensembl chr13:26,825,261...26,850,460
JBrowse link
positive regulation by host of viral release from host cell term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cav2 caveolin 2 ISO
IEA
(PMID:25556234)
GO_REF:0000107
RGD
Ensembl
PMID:25556234 GO_REF:0000107 NCBI chr 4:44,573,264...44,580,640
Ensembl chr 4:44,573,264...44,580,638
JBrowse link
G LOC100911237 zinc finger protein 420-like ISO (PMID:25556234) RGD PMID:25556234 NCBI chr 1:31,494,043...31,519,034 JBrowse link
G Pc pyruvate carboxylase ISO
IEA
(PMID:23861867)
GO_REF:0000107
RGD
Ensembl
PMID:23861867 GO_REF:0000107 NCBI chr 1:219,759,157...219,859,854
Ensembl chr 1:219,759,183...219,859,848
JBrowse link
G Vapa VAMP associated protein A ISO (PMID:19515777) RGD PMID:19515777 NCBI chr 9:113,300,831...113,331,872
Ensembl chr 9:113,300,832...113,331,319
JBrowse link
G Vapb VAMP associated protein B and C ISO (PMID:19515777) RGD PMID:19515777 NCBI chr 3:171,832,558...171,871,042
Ensembl chr 3:171,832,500...171,868,647
JBrowse link
positive regulation of intracellular transport of viral material term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fmr1 FMRP translational regulator 1 IEA
ISO
GO_REF:0000107
(PMID:24514761)
Ensembl
RGD
PMID:24514761 GO_REF:0000107 NCBI chr  X:154,684,924...154,722,369
Ensembl chr  X:154,684,935...154,722,314
JBrowse link
positive regulation of viral budding via host ESCRT complex term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tsg101 tumor susceptibility 101 ISO (PMID:11595185), (PMID:15218037) RGD PMID:11595185, PMID:15218037 NCBI chr 1:102,941,151...102,971,017
Ensembl chr 1:102,941,231...102,970,950
JBrowse link
G Vps37b VPS37B subunit of ESCRT-I ISO (PMID:15218037) RGD PMID:15218037 NCBI chr12:37,984,790...38,023,369
Ensembl chr12:37,984,790...38,023,368
JBrowse link
G Vps4a vacuolar protein sorting 4 homolog A ISO (PMID:17940959), (PMID:24878737) RGD PMID:17940959, PMID:24878737 NCBI chr19:39,230,050...39,243,298
Ensembl chr19:39,229,754...39,243,496
JBrowse link
positive regulation of viral entry into host cell term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bsg basigin (Ok blood group) ISO (PMID:11353871), (PMID:15688292), (PMID:29739904) RGD PMID:11353871, PMID:15688292, PMID:29739904 NCBI chr 7:12,875,536...12,882,753
Ensembl chr 7:12,875,537...12,882,753
JBrowse link
G Cd4 Cd4 molecule ISO (PMID:24942581) RGD PMID:24942581 NCBI chr 4:157,381,862...157,408,357
Ensembl chr 4:157,383,052...157,408,176
JBrowse link
G Cd74 CD74 molecule ISO (PMID:24942581) RGD PMID:24942581 NCBI chr18:56,071,420...56,080,851
Ensembl chr18:56,071,478...56,080,849
JBrowse link
G Lgals1 galectin 1 ISO (PMID:21670307) RGD PMID:21670307 NCBI chr 7:120,153,184...120,156,290
Ensembl chr 7:120,153,184...120,156,289
JBrowse link
G Lgals9 galectin 9 ISO (PMID:21670307) RGD PMID:21670307 NCBI chr10:64,737,022...64,760,195
Ensembl chr10:64,737,022...64,760,201
JBrowse link
G Nectin1 nectin cell adhesion molecule 1 ISO (PMID:11277703) RGD PMID:11277703 NCBI chr 8:48,094,233...48,198,499
Ensembl chr 8:48,094,673...48,157,305
JBrowse link
G P4hb prolyl 4-hydroxylase subunit beta ISO (PMID:21670307) RGD PMID:21670307 NCBI chr10:109,736,459...109,748,070
Ensembl chr10:109,736,458...109,747,987
JBrowse link
G RT1-Db1 RT1 class II, locus Db1 ISO (PMID:24942581) RGD PMID:24942581 NCBI chr20:4,087,621...4,097,190
Ensembl chr20:4,087,618...4,097,190
JBrowse link
G Tmprss2 transmembrane serine protease 2 ISO (PMID:21068237), (PMID:24227843), (PMID:32404436) RGD PMID:21068237, PMID:24227843, PMID:32404436 NCBI chr11:38,063,914...38,103,406
Ensembl chr11:38,063,915...38,103,290
JBrowse link
G Tmprss4 transmembrane serine protease 4 ISO (PMID:32404436) RGD PMID:32404436 NCBI chr 8:49,469,804...49,503,304
Ensembl chr 8:49,469,503...49,502,647
JBrowse link
G Trim11 tripartite motif-containing 11 ISO (PMID:18248090)
(MGI:MGI:5545996|PMID:18248090)
RGD PMID:18248090 MGI:MGI:5545996 NCBI chr10:45,322,199...45,335,030
Ensembl chr10:45,322,248...45,335,030
JBrowse link
G Trim21 tripartite motif-containing 21 ISO (MGI:MGI:5545996|PMID:18248090) RGD PMID:18248090 MGI:MGI:5545996 NCBI chr 1:167,686,148...167,708,735
Ensembl chr 1:167,686,173...167,708,714
JBrowse link
G Trim38 tripartite motif containing 38 ISO (PMID:18248090) RGD PMID:18248090 NCBI chr17:43,600,006...43,607,879 JBrowse link
positive regulation of viral release from host cell term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chmp2a charged multivesicular body protein 2A ISO UniProtKB:Q9UQN3|UniProtKB:Q9Y3E7 (PMID:14505570), (PMID:23051622) RGD PMID:14505570, PMID:23051622 NCBI chr 1:65,540,808...65,543,708
Ensembl chr 1:65,541,322...65,543,707
JBrowse link
G Chmp2b charged multivesicular body protein 2B ISO UniProtKB:O43633|UniProtKB:Q9Y3E7 (PMID:23051622) RGD PMID:23051622 NCBI chr11:2,666,405...2,692,213
Ensembl chr11:2,665,285...2,692,198
JBrowse link
G Chmp3 charged multivesicular body protein 3 ISO UniProtKB:O43633|UniProtKB:Q9UQN3 (PMID:14505570), (PMID:23051622) RGD PMID:14505570, PMID:23051622 NCBI chr 4:99,449,213...99,496,156
Ensembl chr 4:99,449,111...99,494,423
JBrowse link
G Chmp4b charged multivesicular body protein 4B ISO (PMID:14505570) RGD PMID:14505570 NCBI chr 3:150,188,275...150,227,453
Ensembl chr 3:150,188,455...150,227,405
JBrowse link
G Chmp4c charged multivesicular body protein 4C IEA
ISO
GO_REF:0000107
(PMID:14505570)
Ensembl
RGD
PMID:14505570 GO_REF:0000107 NCBI chr 2:93,574,554...93,641,497
Ensembl chr 2:93,574,559...93,641,497
JBrowse link
G Ddb1 damage-specific DNA binding protein 1 ISO
IEA
(PMID:23137809)
GO_REF:0000107
RGD
Ensembl
PMID:23137809 GO_REF:0000107 NCBI chr 1:226,657,561...226,683,356
Ensembl chr 1:226,657,561...226,683,347
JBrowse link
G Tsg101 tumor susceptibility 101 ISO (PMID:11595185), (PMID:15218037) RGD PMID:11595185, PMID:15218037 NCBI chr 1:102,941,151...102,971,017
Ensembl chr 1:102,941,231...102,970,950
JBrowse link
G Vps37b VPS37B subunit of ESCRT-I ISO (PMID:15218037) RGD PMID:15218037 NCBI chr12:37,984,790...38,023,369
Ensembl chr12:37,984,790...38,023,368
JBrowse link
G Vps4a vacuolar protein sorting 4 homolog A ISO (PMID:11595185) RGD PMID:11595185 NCBI chr19:39,230,050...39,243,298
Ensembl chr19:39,229,754...39,243,496
JBrowse link
G Vps4b vacuolar protein sorting 4 homolog B ISO (PMID:14505570) RGD PMID:14505570 NCBI chr13:26,825,261...26,850,460
Ensembl chr13:26,825,261...26,850,460
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20028
    positive regulation of biological process 6651
      positive regulation of viral process 92
        positive regulation of viral life cycle 32
          positive regulation of intracellular transport of viral material 1
          positive regulation of receptor-mediated virion attachment to host cell 0
          positive regulation of viral DNA genome packaging via site-specific sequence recognition 0
          positive regulation of viral budding via host ESCRT complex 3
          positive regulation of viral entry into host cell + 13
          positive regulation of viral release from host cell + 15
Path 2
Term Annotations click to browse term
  biological_process 20028
    interspecies interaction between organisms 1919
      symbiotic process 400
        regulation of symbiotic process 230
          regulation of viral process 213
            positive regulation of viral process 92
              positive regulation of viral life cycle 32
                positive regulation of intracellular transport of viral material 1
                positive regulation of receptor-mediated virion attachment to host cell 0
                positive regulation of viral DNA genome packaging via site-specific sequence recognition 0
                positive regulation of viral budding via host ESCRT complex 3
                positive regulation of viral entry into host cell + 13
                positive regulation of viral release from host cell + 15
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.