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ONTOLOGY REPORT - ANNOTATIONS


Term:negative regulation of telomere capping
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Accession:GO:1904354 term browser browse the term
Definition:Any process that stops, prevents or reduces the frequency, rate or extent of telomere capping.
Synonyms:exact_synonym: down regulation of telomere capping;   down regulation of telomere end protection;   downregulation of telomere capping;   downregulation of telomere end protection;   negative regulation of telomere end protection
 narrow_synonym: inhibition of telomere capping;   inhibition of telomere end protection


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negative regulation of telomere capping term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atm ATM serine/threonine kinase ISO (PMID:17694070) RGD PMID:17694070 NCBI chr 8:58,015,938...58,119,973
Ensembl chr 8:58,015,940...58,120,045
JBrowse link
G Nbn nibrin ISO
IEA
(PMID:17694070)
GO_REF:0000107
RGD
Ensembl
PMID:17694070 GO_REF:0000107 NCBI chr 5:29,622,347...29,656,877
Ensembl chr 5:29,622,281...29,656,864
JBrowse link
G Rad50 RAD50 double strand break repair protein ISO (PMID:17694070) RGD PMID:17694070 NCBI chr10:39,002,130...39,054,042
Ensembl chr10:39,001,498...39,054,142
JBrowse link
G Smg6 SMG6 nonsense mediated mRNA decay factor ISO (PMID:12676087) RGD PMID:12676087 NCBI chr10:61,526,024...61,542,583
NCBI chr10:61,771,912...62,007,030
Ensembl chr10:61,772,449...62,007,030
Ensembl chr10:61,772,449...62,007,030
JBrowse link
G Terf2 telomeric repeat binding factor 2 ISO (PMID:24270157) RGD PMID:24270157 NCBI chr19:39,271,992...39,301,506
Ensembl chr19:39,272,499...39,300,893
JBrowse link
negative regulation of protection from non-homologous end joining at telomere term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ercc1 ERCC excision repair 1, endonuclease non-catalytic subunit ISO (PMID:14690602) RGD PMID:14690602 NCBI chr 1:80,256,973...80,268,198
Ensembl chr 1:80,256,973...80,268,198
JBrowse link
G Ercc4 ERCC excision repair 4, endonuclease catalytic subunit ISO (PMID:14690602) RGD PMID:14690602 NCBI chr10:2,010,140...2,037,953
Ensembl chr10:2,010,648...2,037,891
JBrowse link
G Xrcc1 X-ray repair cross complementing 1 ISO (MGI:MGI:3758502|PMID:14690602) RGD PMID:14690602 MGI:MGI:3758502 NCBI chr 1:81,412,635...81,441,680
Ensembl chr 1:81,413,353...81,441,678
JBrowse link
G Xrcc4 X-ray repair cross complementing 4 ISO (MGI:MGI:3758502|PMID:14690602) RGD PMID:14690602 MGI:MGI:3758502 NCBI chr 2:18,674,496...18,927,463
Ensembl chr 2:18,677,220...18,927,365
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20014
    biological regulation 13759
      regulation of biological quality 4284
        regulation of telomere maintenance 82
          negative regulation of telomere maintenance 36
            negative regulation of telomere capping 9
              negative regulation of protection from non-homologous end joining at telomere 4
Path 2
Term Annotations click to browse term
  biological_process 20014
    metabolic process 12256
      cellular metabolic process 11065
        cellular aromatic compound metabolic process 5708
          nucleobase-containing compound metabolic process 5483
            nucleic acid metabolic process 4980
              DNA metabolic process 919
                telomere maintenance 127
                  regulation of telomere maintenance 82
                    negative regulation of telomere maintenance 36
                      negative regulation of telomere capping 9
                        negative regulation of protection from non-homologous end joining at telomere 4
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.