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ONTOLOGY REPORT - ANNOTATIONS


Term:endoplasmic reticulum mannose trimming
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Accession:GO:1904380 term browser browse the term
Definition:Any protein alpha-1,2-demannosylation that takes place in the endoplasmic reticulum quality control compartment (ERQC).
Synonyms:exact_synonym: ER mannose trimming;   ER protein alpha-1,2-demannosylation;   protein alpha-1,2-demannosylation in ER;   protein alpha-1,2-demannosylation in ER quality control compartment;   protein alpha-1,2-demannosylation in ERQC;   protein alpha-1,2-demannosylation in endoplasmic reticulum;   protein alpha-1,2-demannosylation in endoplasmic reticulum quality control compartment
 related_synonym: glycoprotein mannose trimming in ER quality control compartment;   glycoprotein mannose trimming in ER-derived quality control compartment;   glycoprotein mannose trimming in ERQC;   glycoprotein mannose trimming in endoplasmic reticulum quality control compartment;   protein alpha-1,2-demannosylation in ER-derived quality control compartment


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endoplasmic reticulum mannose trimming term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Man1b1 mannosidase, alpha, class 1B, member 1 JBrowse link 3 2,547,259 2,569,051 RGD:1624291
trimming of terminal mannose on B branch term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Edem2 ER degradation enhancing alpha-mannosidase like protein 2 JBrowse link 3 151,232,741 151,258,559 RGD:1624291
G Man1b1 mannosidase, alpha, class 1B, member 1 JBrowse link 3 2,547,259 2,569,051 RGD:1624291
trimming of terminal mannose on C branch term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Edem1 ER degradation enhancing alpha-mannosidase like protein 1 JBrowse link 4 140,886,644 140,918,654 RGD:1624291

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19336
    cellular process 17240
      cellular metabolic process 10567
        cellular macromolecule metabolic process 8127
          glycoprotein metabolic process 354
            protein deglycosylation 13
              protein demannosylation 4
                protein alpha-1,2-demannosylation 4
                  endoplasmic reticulum mannose trimming 3
                    trimming of first mannose on A branch 0
                    trimming of second mannose on A branch 0
                    trimming of terminal mannose on B branch 2
                    trimming of terminal mannose on C branch 1
Path 2
Term Annotations click to browse term
  biological_process 19336
    metabolic process 11555
      organic substance metabolic process 10949
        organonitrogen compound metabolic process 6852
          protein metabolic process 5973
            cellular protein metabolic process 5293
              cellular protein modification process 3851
                protein deglycosylation 13
                  protein demannosylation 4
                    protein alpha-1,2-demannosylation 4
                      endoplasmic reticulum mannose trimming 3
                        trimming of first mannose on A branch 0
                        trimming of second mannose on A branch 0
                        trimming of terminal mannose on B branch 2
                        trimming of terminal mannose on C branch 1
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.