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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of RNA binding
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Accession:GO:1905214 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of RNA binding.


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modulation by host of RNA binding by virus term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nucks1 nuclear casein kinase and cyclin-dependent kinase substrate 1 ISO (PMID:25116364) RGD PMID:25116364 NCBI chr13:48,679,726...48,709,663
Ensembl chr13:48,679,774...48,705,575
JBrowse link
negative regulation of selenocysteine insertion sequence binding term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eif4a3 eukaryotic translation initiation factor 4A3 IDA RGD PMID:19716792 RGD:10045552 NCBI chr10:108,415,201...108,425,195
Ensembl chr10:108,415,202...108,425,206
JBrowse link
positive regulation of mRNA 3'-UTR binding term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdk9 cyclin-dependent kinase 9 ISO (PMID:19575011) RGD PMID:19575011 NCBI chr 3:11,742,269...11,747,117
Ensembl chr 3:11,742,266...11,747,113
JBrowse link
positive regulation of mRNA binding term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eif3c eukaryotic translation initiation factor 3, subunit C ISO UniProtKB:O15371|UniProtKB:P60228|UniProtKB:Q04637 (PMID:24092755) RGD PMID:24092755 NCBI chr 1:197,964,406...197,982,917
Ensembl chr 1:197,964,407...197,982,601
JBrowse link
G Eif3d eukaryotic translation initiation factor 3, subunit D ISO UniProtKB:P60228|UniProtKB:Q04637|UniProtKB:Q99613 (PMID:24092755) RGD PMID:24092755 NCBI chr 7:119,188,189...119,200,578
Ensembl chr 7:119,188,185...119,200,623
JBrowse link
G Eif3e eukaryotic translation initiation factor 3 subunit E ISO UniProtKB:O15371|UniProtKB:Q04637|UniProtKB:Q99613 (PMID:24092755) RGD PMID:24092755 NCBI chr 7:82,997,694...83,037,231 JBrowse link
G Fmr1 FMRP translational regulator 1 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:25464849)
Ensembl
UniProt
RGD
PMID:25464849 GO_REF:0000024, GO_REF:0000107 NCBI chr  X:154,684,924...154,722,369
Ensembl chr  X:154,684,935...154,722,314
JBrowse link
G Hnrnpl heterogeneous nuclear ribonucleoprotein L IMP RGD PMID:19273590 RGD:9999430 NCBI chr 1:86,994,090...87,006,776
Ensembl chr 1:86,996,093...87,006,776
JBrowse link
G Larp6 La ribonucleoprotein 6, translational regulator ISO (PMID:21746880), (PMID:22190748) RGD PMID:21746880, PMID:22190748 NCBI chr 8:65,611,570...65,632,706
Ensembl chr 8:65,611,570...65,632,706
JBrowse link
positive regulation of mRNA cap binding term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eif4g1 eukaryotic translation initiation factor 4 gamma, 1 ISO (PMID:23409027) RGD PMID:23409027 NCBI chr11:83,907,659...83,927,683
Ensembl chr11:83,908,109...83,926,524
JBrowse link
positive regulation of RNA binding term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ncbp1 nuclear cap binding protein subunit 1 ISO (PMID:23793891) RGD PMID:23793891 NCBI chr 5:61,734,118...61,767,098
Ensembl chr 5:61,734,118...61,766,481
JBrowse link
regulation of mRNA binding term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Carm1 coactivator-associated arginine methyltransferase 1 IMP RGD PMID:22736542 RGD:9586719 NCBI chr 8:22,577,723...22,622,555
Ensembl chr 8:22,577,715...22,622,560
JBrowse link
G Eif4a3 eukaryotic translation initiation factor 4A3 IDA Secisbp2 RGD PMID:19716792 RGD:10045552 NCBI chr10:108,415,201...108,425,195
Ensembl chr10:108,415,202...108,425,206
JBrowse link

Term paths to the root
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Term Annotations click to browse term
  biological_process 20017
    biological regulation 13767
      regulation of molecular function 3065
        regulation of binding 408
          regulation of RNA binding 12
            modulation by host of RNA binding by virus 1
            negative regulation of RNA binding + 1
            positive regulation of RNA binding + 9
            regulation of mRNA binding + 10
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.