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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of morphogenesis of an epithelium
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Accession:GO:1905330 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of morphogenesis of an epithelium.
Comment:An example of this is MMRN2 in human (Q9H8L6) in PMID:25745997 (inferred from direct assay).
Synonyms:exact_synonym: regulation of epithelium morphogenesis


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activation of prostate induction by androgen receptor signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ar androgen receptor ISO
IEA
MGI:MGI:3716756 (MGI:MGI:3714080|PMID:17317769)
GO_REF:0000107
RGD
Ensembl
PMID:17317769 GO_REF:0000107, MGI:MGI:3714080 NCBI chr  X:67,656,253...67,828,998
Ensembl chr  X:67,656,253...67,829,026
JBrowse link
lung induction term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnnb1 catenin beta 1 IEA
ISO
GO_REF:0000107
MGI:MGI:2148567|MGI:MGI:2148569 (MGI:MGI:4360856|PMID:19686689), (MGI:MGI:4361775|PMID:19805295)
Ensembl
RGD
PMID:19686689, PMID:19805295 GO_REF:0000107, MGI:MGI:4360856, MGI:MGI:4361775 NCBI chr 8:129,601,511...129,628,378
Ensembl chr 8:129,617,812...129,627,372
JBrowse link
G Wnt2 Wnt family member 2 ISO MGI:MGI:1261834 (MGI:MGI:4360856|PMID:19686689) RGD PMID:19686689 MGI:MGI:4360856 NCBI chr 4:45,286,845...45,332,899
Ensembl chr 4:45,292,437...45,332,420
JBrowse link
G Wnt2b Wnt family member 2B ISO MGI:MGI:98954 (MGI:MGI:4360856|PMID:19686689) RGD PMID:19686689 MGI:MGI:4360856 NCBI chr 2:207,433,771...207,457,094
Ensembl chr 2:207,440,886...207,455,258
JBrowse link
negative regulation of branch elongation involved in ureteric bud branching by BMP signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 IEA
ISO
ISS
GO_REF:0000107
(PMID:10706139), (PMID:17118062)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:10706139, PMID:17118062 GO_REF:0000024, GO_REF:0000107 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
JBrowse link
negative regulation of branching involved in lung morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tnf tumor necrosis factor ISO (PMID:17350185) RGD PMID:17350185 NCBI chr20:5,189,382...5,192,000
Ensembl chr20:5,189,390...5,192,000
JBrowse link
negative regulation of branching involved in ureteric bud morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 ISS
ISO
GO_REF:0000024
MGI:MGI:102780 (MGI:MGI:3525902|PMID:15634693), (MGI:MGI:4949995|PMID:21281623)
(PMID:12141440), (PMID:17118062)
UniProt
RGD
PMID:12141440, PMID:15634693, PMID:17118062, PMID:21281623 GO_REF:0000024, MGI:MGI:3525902, MGI:MGI:4949995 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
JBrowse link
G Tacstd2 tumor-associated calcium signal transducer 2 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(MGI:MGI:5315060|PMID:22194864)
Ensembl
UniProt
RGD
PMID:22194864 GO_REF:0000024, GO_REF:0000107, MGI:MGI:5315060 NCBI chr 4:98,341,187...98,342,887
Ensembl chr 4:98,341,188...98,342,887
JBrowse link
negative regulation of convergent extension involved in axis elongation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nkd1 NKD inhibitor of WNT signaling pathway 1 ISO (MGI:MGI:5437442|PMID:11274398) RGD PMID:11274398 MGI:MGI:5437442 NCBI chr19:19,434,720...19,509,087
Ensembl chr19:19,436,333...19,509,087
JBrowse link
negative regulation of fibroblast growth factor receptor signaling pathway involved in ureteric bud formation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gata3 GATA binding protein 3 ISO
ISS
(MGI:MGI:3822373|PMID:19112489)
GO_REF:0000024
RGD
UniProt
PMID:19112489 GO_REF:0000024, MGI:MGI:3822373 NCBI chr17:72,419,752...72,452,043
Ensembl chr17:72,429,618...72,450,681
JBrowse link
negative regulation of glial cell-derived neurotrophic factor receptor signaling pathway involved in ureteric bud formation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gata3 GATA binding protein 3 ISO
ISS
(MGI:MGI:3822373|PMID:19112489)
GO_REF:0000024
RGD
UniProt
PMID:19112489 GO_REF:0000024, MGI:MGI:3822373 NCBI chr17:72,419,752...72,452,043
Ensembl chr17:72,429,618...72,450,681
JBrowse link
negative regulation of heart looping term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tbx2 T-box transcription factor 2 ISO (MGI:MGI:3039059|PMID:15042700) RGD PMID:15042700 MGI:MGI:3039059 NCBI chr10:73,278,932...73,290,764
Ensembl chr10:73,279,119...73,289,921
JBrowse link
negative regulation of mesenchymal to epithelial transition involved in metanephros morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cited1 Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 1 IMP PMID:15843474 UniProt PMID:15843474 RGD:8554075 NCBI chr  X:72,128,996...72,133,692
Ensembl chr  X:72,128,994...72,133,692
JBrowse link
G Ctnnb1 catenin beta 1 ISO
IEA
(MGI:MGI:3714576|PMID:17537789)
GO_REF:0000107
RGD
Ensembl
PMID:17537789 GO_REF:0000107, MGI:MGI:3714576 NCBI chr 8:129,601,511...129,628,378
Ensembl chr 8:129,617,812...129,627,372
JBrowse link
G Sall1 spalt-like transcription factor 1 ISO MGI:MGI:3603818 (MGI:MGI:5563280|PMID:24550112) RGD PMID:24550112 MGI:MGI:5563280 NCBI chr19:23,387,737...23,405,025
Ensembl chr19:23,389,375...23,405,039
JBrowse link
negative regulation of planar cell polarity pathway involved in axis elongation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sfrp1 secreted frizzled-related protein 1 ISO
IEA
MGI:MGI:108078|MGI:MGI:1860298|MGI:MGI:2135272 (MGI:MGI:3793375|PMID:18257070)
GO_REF:0000107
RGD
Ensembl
PMID:18257070 GO_REF:0000107, MGI:MGI:3793375 NCBI chr16:73,372,007...73,410,777
Ensembl chr16:73,372,007...73,410,777
JBrowse link
G Sfrp2 secreted frizzled-related protein 2 ISO MGI:MGI:1860298|MGI:MGI:2135272|MGI:MGI:892014 (MGI:MGI:3793375|PMID:18257070) RGD PMID:18257070 MGI:MGI:3793375 NCBI chr 2:182,723,732...182,731,277
Ensembl chr 2:182,723,854...182,731,764
JBrowse link
G Sfrp5 secreted frizzled-related protein 5 ISO MGI:MGI:108078|MGI:MGI:2135272|MGI:MGI:892014 (MGI:MGI:3793375|PMID:18257070) RGD PMID:18257070 MGI:MGI:3793375 NCBI chr 1:261,442,108...261,446,570
Ensembl chr 1:261,442,108...261,446,570
JBrowse link
negative regulation of planar cell polarity pathway involved in cardiac muscle tissue morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrp6 LDL receptor related protein 6 ISO MGI:MGI:98958 (MGI:MGI:4830282|PMID:19056682) RGD PMID:19056682 MGI:MGI:4830282 NCBI chr 4:168,194,054...168,323,962
Ensembl chr 4:168,194,927...168,323,751
JBrowse link
negative regulation of planar cell polarity pathway involved in cardiac right atrium morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrp6 LDL receptor related protein 6 ISO MGI:MGI:98958 (MGI:MGI:4830282|PMID:19056682) RGD PMID:19056682 MGI:MGI:4830282 NCBI chr 4:168,194,054...168,323,962
Ensembl chr 4:168,194,927...168,323,751
JBrowse link
negative regulation of planar cell polarity pathway involved in neural tube closure term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrp6 LDL receptor related protein 6 ISO MGI:MGI:98958 (MGI:MGI:4830282|PMID:19056682) RGD PMID:19056682 MGI:MGI:4830282 NCBI chr 4:168,194,054...168,323,962
Ensembl chr 4:168,194,927...168,323,751
JBrowse link
negative regulation of planar cell polarity pathway involved in outflow tract morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrp6 LDL receptor related protein 6 ISO MGI:MGI:98958 (MGI:MGI:4830282|PMID:19056682) RGD PMID:19056682 MGI:MGI:4830282 NCBI chr 4:168,194,054...168,323,962
Ensembl chr 4:168,194,927...168,323,751
JBrowse link
negative regulation of planar cell polarity pathway involved in pericardium morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrp6 LDL receptor related protein 6 ISO MGI:MGI:98958 (MGI:MGI:4830282|PMID:19056682) RGD PMID:19056682 MGI:MGI:4830282 NCBI chr 4:168,194,054...168,323,962
Ensembl chr 4:168,194,927...168,323,751
JBrowse link
negative regulation of planar cell polarity pathway involved in ventricular septum morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrp6 LDL receptor related protein 6 ISO MGI:MGI:98958 (MGI:MGI:4830282|PMID:19056682) RGD PMID:19056682 MGI:MGI:4830282 NCBI chr 4:168,194,054...168,323,962
Ensembl chr 4:168,194,927...168,323,751
JBrowse link
negative regulation of prostatic bud formation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 IEA
ISO
GO_REF:0000107
MGI:MGI:1857137 (MGI:MGI:1934513|PMID:11401393), (MGI:MGI:3785350|PMID:18393306)
Ensembl
RGD
PMID:11401393, PMID:18393306 GO_REF:0000107, MGI:MGI:1934513, MGI:MGI:3785350 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
JBrowse link
G Bmp7 bone morphogenetic protein 7 ISO (MGI:MGI:3612905|PMID:16324690) RGD PMID:16324690 MGI:MGI:3612905 NCBI chr 3:170,879,972...170,955,820
Ensembl chr 3:170,879,973...170,955,399
JBrowse link
G Sulf1 sulfatase 1 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(MGI:MGI:4941125|PMID:20410206)
Ensembl
UniProt
RGD
PMID:20410206 GO_REF:0000024, GO_REF:0000107, MGI:MGI:4941125 NCBI chr 5:5,999,520...6,186,901
Ensembl chr 5:5,999,475...6,186,329
JBrowse link
G Wnt5a Wnt family member 5A ISO
IEA
MGI:MGI:1857617 (MGI:MGI:3822053|PMID:18804104)
GO_REF:0000107
RGD
Ensembl
PMID:18804104 GO_REF:0000107, MGI:MGI:3822053 NCBI chr16:4,469,451...4,490,271
Ensembl chr16:4,469,468...4,489,860
JBrowse link
negative regulation of wound healing, spreading of epidermal cells term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clasp1 cytoplasmic linker associated protein 1 ISO (PMID:24859005) RGD PMID:24859005 NCBI chr13:34,365,038...34,584,651
Ensembl chr13:34,365,147...34,584,651
JBrowse link
G Clasp2 cytoplasmic linker associated protein 2 ISO
IEA
(PMID:24859005)
GO_REF:0000107
RGD
Ensembl
PMID:24859005 GO_REF:0000107 NCBI chr 8:122,003,719...122,185,495
Ensembl chr 8:122,003,916...122,185,495
JBrowse link
G Phldb2 pleckstrin homology-like domain, family B, member 2 ISO
IEA
(PMID:24859005)
GO_REF:0000107
RGD
Ensembl
PMID:24859005 GO_REF:0000107 NCBI chr11:60,042,879...60,051,229
Ensembl chr11:57,265,732...57,481,589
JBrowse link
G Pten phosphatase and tensin homolog ISO (PMID:27919618) RGD PMID:27919618 NCBI chr 1:251,421,814...251,487,634
Ensembl chr 1:251,421,596...251,487,832
JBrowse link
planar cell polarity pathway involved in axis elongation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Vangl2 VANGL planar cell polarity protein 2 ISO MGI:MGI:108078|MGI:MGI:1860298|MGI:MGI:892014 (MGI:MGI:3793375|PMID:18257070) RGD PMID:18257070 MGI:MGI:3793375 NCBI chr13:90,379,203...90,405,627
Ensembl chr13:90,380,632...90,405,591
JBrowse link
G Wnt11 Wnt family member 11 ISO MGI:MGI:98958 (MGI:MGI:5634837|PMID:25813538) RGD PMID:25813538 MGI:MGI:5634837 NCBI chr 1:163,794,136...163,813,756
Ensembl chr 1:163,797,660...163,813,756
JBrowse link
G Wnt5a Wnt family member 5A ISO
IEA
MGI:MGI:101948|MGI:MGI:1857617 (MGI:MGI:5634837|PMID:25813538)
GO_REF:0000107
RGD
Ensembl
PMID:25813538 GO_REF:0000107, MGI:MGI:5634837 NCBI chr16:4,469,451...4,490,271
Ensembl chr16:4,469,468...4,489,860
JBrowse link
planar cell polarity pathway involved in axon guidance term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Celsr3 cadherin, EGF LAG seven-pass G-type receptor 3 ISO (MGI:MGI:4866939|PMID:21106844) RGD PMID:21106844 MGI:MGI:4866939 NCBI chr 8:117,620,293...117,648,034
Ensembl chr 8:117,620,317...117,648,028
JBrowse link
G Fzd3 frizzled class receptor 3 ISO (MGI:MGI:4866939|PMID:21106844) RGD PMID:21106844 MGI:MGI:4866939 NCBI chr15:48,601,259...48,670,257
Ensembl chr15:48,601,266...48,670,257
JBrowse link
G Ryk receptor-like tyrosine kinase ISO UniProtKB:P22725 (MGI:MGI:5707582|PMID:23517308) RGD PMID:23517308 MGI:MGI:5707582 NCBI chr 8:111,326,339...111,398,640
Ensembl chr 8:111,326,433...111,397,867
JBrowse link
G Vangl2 VANGL planar cell polarity protein 2 ISO (MGI:MGI:4866939|PMID:21106844) RGD PMID:21106844 MGI:MGI:4866939 NCBI chr13:90,379,203...90,405,627
Ensembl chr13:90,380,632...90,405,591
JBrowse link
G Wnt5a Wnt family member 5A IEA
ISO
GO_REF:0000107
(MGI:MGI:4866939|PMID:21106844), (MGI:MGI:5707582|PMID:23517308)
Ensembl
RGD
PMID:21106844, PMID:23517308 GO_REF:0000107, MGI:MGI:4866939, MGI:MGI:5707582 NCBI chr16:4,469,451...4,490,271
Ensembl chr16:4,469,468...4,489,860
JBrowse link
G Wnt7b Wnt family member 7B ISO (MGI:MGI:4866939|PMID:21106844) RGD PMID:21106844 MGI:MGI:4866939 NCBI chr 7:126,423,418...126,465,724
Ensembl chr 7:126,420,656...126,465,723
JBrowse link
planar cell polarity pathway involved in cardiac muscle tissue morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt5a Wnt family member 5A ISO
IEA
MGI:MGI:1857617 (MGI:MGI:4830282|PMID:19056682)
GO_REF:0000107
RGD
Ensembl
PMID:19056682 GO_REF:0000107, MGI:MGI:4830282 NCBI chr16:4,469,451...4,490,271
Ensembl chr16:4,469,468...4,489,860
JBrowse link
planar cell polarity pathway involved in cardiac right atrium morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt5a Wnt family member 5A ISO
IEA
MGI:MGI:1857617 (MGI:MGI:4830282|PMID:19056682)
GO_REF:0000107
RGD
Ensembl
PMID:19056682 GO_REF:0000107, MGI:MGI:4830282 NCBI chr16:4,469,451...4,490,271
Ensembl chr16:4,469,468...4,489,860
JBrowse link
planar cell polarity pathway involved in gastrula mediolateral intercalation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt11 Wnt family member 11 ISO MGI:MGI:98958 (MGI:MGI:5634837|PMID:25813538) RGD PMID:25813538 MGI:MGI:5634837 NCBI chr 1:163,794,136...163,813,756
Ensembl chr 1:163,797,660...163,813,756
JBrowse link
G Wnt5a Wnt family member 5A ISO
IEA
MGI:MGI:101948 (MGI:MGI:5634837|PMID:25813538)
GO_REF:0000107
RGD
Ensembl
PMID:25813538 GO_REF:0000107, MGI:MGI:5634837 NCBI chr16:4,469,451...4,490,271
Ensembl chr16:4,469,468...4,489,860
JBrowse link
planar cell polarity pathway involved in heart morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Vangl2 VANGL planar cell polarity protein 2 ISO MGI:MGI:5558098 (MGI:MGI:5544506|PMID:24302887) RGD PMID:24302887 MGI:MGI:5544506 NCBI chr13:90,379,203...90,405,627
Ensembl chr13:90,380,632...90,405,591
JBrowse link
planar cell polarity pathway involved in neural tube closure term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Celsr1 cadherin, EGF LAG seven-pass G-type receptor 1 ISO MGI:MGI:1918711|MGI:MGI:2135272 (MGI:MGI:4830023|PMID:20704721) RGD PMID:20704721 MGI:MGI:4830023 NCBI chr 7:126,774,010...126,914,085
Ensembl chr 7:126,775,516...126,913,585
JBrowse link
G Dvl1 dishevelled segment polarity protein 1 ISO
IBA
MGI:MGI:106613 (MGI:MGI:3624185|PMID:16571627)
PMID:21873635
RGD PMID:16571627, PMID:21873635 MGI:MGI:3624185, RGD:13792537 NCBI chr 5:173,295,948...173,308,014
Ensembl chr 5:173,296,270...173,307,945
JBrowse link
G Dvl2 dishevelled segment polarity protein 2 ISO
IBA
MGI:MGI:2135272|MGI:MGI:2429760|MGI:MGI:94941 (MGI:MGI:3624185|PMID:16571627)
PMID:21873635
RGD PMID:16571627, PMID:21873635 MGI:MGI:3624185, RGD:13792537 NCBI chr10:56,609,810...56,619,269
Ensembl chr10:56,610,051...56,619,269
JBrowse link
G Dvl3 dishevelled segment polarity protein 3 ISO
IBA
MGI:MGI:2135272 (MGI:MGI:3821448|PMID:19008950)
PMID:21873635
RGD PMID:19008950, PMID:21873635 MGI:MGI:3821448, RGD:13792537 NCBI chr11:84,051,177...84,068,479
Ensembl chr11:84,051,078...84,068,302
JBrowse link
G Fzd1 frizzled class receptor 1 ISO
IEA
MGI:MGI:1888513|MGI:MGI:2135272 (MGI:MGI:4837757|PMID:20940229)
GO_REF:0000107
RGD
Ensembl
PMID:20940229 GO_REF:0000107, MGI:MGI:4837757 NCBI chr 4:26,470,864...26,475,262
Ensembl chr 4:26,470,864...26,475,262
JBrowse link
G Fzd2 frizzled class receptor 2 ISO
IEA
MGI:MGI:1196625|MGI:MGI:2135272 (MGI:MGI:4837757|PMID:20940229)
GO_REF:0000107
RGD
Ensembl
PMID:20940229 GO_REF:0000107, MGI:MGI:4837757 NCBI chr10:90,550,147...90,552,057
Ensembl chr10:90,550,147...90,552,057
JBrowse link
G Grhl3 grainyhead-like transcription factor 3 ISO MGI:MGI:2135272 (MGI:MGI:4819429|PMID:20643356) RGD PMID:20643356 MGI:MGI:4819429 NCBI chr 5:153,893,039...153,925,045
Ensembl chr 5:153,893,039...153,924,896
JBrowse link
G Ptk7 protein tyrosine kinase 7 ISO MGI:MGI:1100883|MGI:MGI:2135272 (MGI:MGI:4830023|PMID:20704721) RGD PMID:20704721 MGI:MGI:4830023 NCBI chr 9:16,662,588...16,729,888
Ensembl chr 9:16,702,460...16,729,030
JBrowse link
G Sfrp1 secreted frizzled-related protein 1 ISO
IEA
MGI:MGI:108078|MGI:MGI:1860298|MGI:MGI:2135272 (MGI:MGI:3793375|PMID:18257070)
GO_REF:0000107
RGD
Ensembl
PMID:18257070 GO_REF:0000107, MGI:MGI:3793375 NCBI chr16:73,372,007...73,410,777
Ensembl chr16:73,372,007...73,410,777
JBrowse link
G Sfrp2 secreted frizzled-related protein 2 ISO MGI:MGI:1860298|MGI:MGI:2135272|MGI:MGI:892014 (MGI:MGI:3793375|PMID:18257070) RGD PMID:18257070 MGI:MGI:3793375 NCBI chr 2:182,723,732...182,731,277
Ensembl chr 2:182,723,854...182,731,764
JBrowse link
G Sfrp5 secreted frizzled-related protein 5 ISO MGI:MGI:108078|MGI:MGI:2135272|MGI:MGI:892014 (MGI:MGI:3793375|PMID:18257070) RGD PMID:18257070 MGI:MGI:3793375 NCBI chr 1:261,442,108...261,446,570
Ensembl chr 1:261,442,108...261,446,570
JBrowse link
G Vangl2 VANGL planar cell polarity protein 2 ISO MGI:MGI:106613|MGI:MGI:108078|MGI:MGI:108100|MGI:MGI:1100883|MGI:MGI:1196625|MGI:MGI:1857642|MGI:MGI:1860298|MGI:MGI:1888513|MGI:MGI:1918711|MGI:MGI:2655333|MGI:MGI:892014 (MGI:MGI:3624185|PMID:16571627), (MGI:MGI:3793375|PMID:18257070), (MGI:MGI:3821448|PMID:19008950), (MGI:MGI:4819429|PMID:20643356), (MGI:MGI:4830023|PMID:20704721), (MGI:MGI:4837757|PMID:20940229) RGD PMID:16571627, PMID:18257070, PMID:19008950, PMID:20643356, PMID:20704721, PMID:20940229 MGI:MGI:3624185, MGI:MGI:3793375, MGI:MGI:3821448, MGI:MGI:4819429, MGI:MGI:4830023, MGI:MGI:4837757 NCBI chr13:90,379,203...90,405,627
Ensembl chr13:90,380,632...90,405,591
JBrowse link
G Wnt5a Wnt family member 5A ISO
IEA
MGI:MGI:1857617 (MGI:MGI:4830282|PMID:19056682)
GO_REF:0000107
RGD
Ensembl
PMID:19056682 GO_REF:0000107, MGI:MGI:4830282 NCBI chr16:4,469,451...4,490,271
Ensembl chr16:4,469,468...4,489,860
JBrowse link
planar cell polarity pathway involved in outflow tract morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt5a Wnt family member 5A ISO
IEA
MGI:MGI:1857617 (MGI:MGI:4830282|PMID:19056682)
GO_REF:0000107
RGD
Ensembl
PMID:19056682 GO_REF:0000107, MGI:MGI:4830282 NCBI chr16:4,469,451...4,490,271
Ensembl chr16:4,469,468...4,489,860
JBrowse link
planar cell polarity pathway involved in pericardium morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt5a Wnt family member 5A ISO
IEA
MGI:MGI:1857617 (MGI:MGI:4830282|PMID:19056682)
GO_REF:0000107
RGD
Ensembl
PMID:19056682 GO_REF:0000107, MGI:MGI:4830282 NCBI chr16:4,469,451...4,490,271
Ensembl chr16:4,469,468...4,489,860
JBrowse link
planar cell polarity pathway involved in ventricular septum morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt5a Wnt family member 5A ISO
IEA
MGI:MGI:1857617 (MGI:MGI:4830282|PMID:19056682)
GO_REF:0000107
RGD
Ensembl
PMID:19056682 GO_REF:0000107, MGI:MGI:4830282 NCBI chr16:4,469,451...4,490,271
Ensembl chr16:4,469,468...4,489,860
JBrowse link
positive regulation blood vessel branching term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase ISO (MGI:MGI:5588737|PMID:24863063) RGD PMID:24863063 MGI:MGI:5588737 NCBI chr 3:10,041,820...10,145,076
Ensembl chr 3:10,041,826...10,144,388
JBrowse link
G Mdk midkine ISS
ISO
GO_REF:0000024
(PMID:19060126)
UniProt
RGD
PMID:19060126 GO_REF:0000024 NCBI chr 3:80,841,003...80,843,895
Ensembl chr 3:80,841,005...80,842,916
JBrowse link
G Sirt6 sirtuin 6 ISO (PMID:23201774) RGD PMID:23201774 NCBI chr 7:10,937,622...10,943,048
Ensembl chr 7:10,937,599...10,943,063
JBrowse link
positive regulation of branching involved in lung morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(MGI:MGI:4456940|PMID:17350185)
Ensembl
UniProt
RGD
PMID:17350185 GO_REF:0000024, GO_REF:0000107, MGI:MGI:4456940 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
JBrowse link
G Ctnnb1 catenin beta 1 ISO MGI:MGI:2148567 (MGI:MGI:3801531|PMID:18533146) RGD PMID:18533146 MGI:MGI:3801531 NCBI chr 8:129,601,511...129,628,378
Ensembl chr 8:129,617,812...129,627,372
JBrowse link
G Pdgfra platelet derived growth factor receptor alpha IMP RGD PMID:8879189 RGD:11087558 NCBI chr14:35,527,926...35,581,130
Ensembl chr14:35,527,927...35,581,031
JBrowse link
positive regulation of branching involved in ureteric bud morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agt angiotensinogen ISO (PMID:18607644) RGD PMID:18607644 NCBI chr19:57,321,594...57,333,460
Ensembl chr19:57,321,640...57,333,433
JBrowse link
G Agtr1a angiotensin II receptor, type 1a IMP PMID:17537984 UniProt PMID:17537984 RGD:1643596 NCBI chr17:35,907,102...35,958,136
Ensembl chr17:35,907,108...35,958,077
JBrowse link
G Agtr1b angiotensin II receptor, type 1b IMP PMID:17537984 UniProt PMID:17537984 RGD:1643596 NCBI chr 2:105,149,020...105,224,335
Ensembl chr 2:105,149,020...105,224,295
JBrowse link
G Agtr2 angiotensin II receptor, type 2 IMP
ISO
PMID:17537984
(MGI:MGI:3808848|PMID:18607644)
RGD PMID:18607644, PMID:17537984 MGI:MGI:3808848, RGD:1643596 NCBI chr  X:119,389,480...119,393,845
Ensembl chr  X:119,390,013...119,393,842
JBrowse link
G Bmp4 bone morphogenetic protein 4 IMP PMID:17537984 UniProt PMID:17537984 RGD:1643596 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
JBrowse link
G Gdnf glial cell derived neurotrophic factor IMP
IBA
ISO
IEA
IDA
PMID:17537984
PMID:21873635
(PMID:17229286), (PMID:8657307)
(MGI:MGI:5284782|PMID:17229286)
GO_REF:0000107
PMID:17522159
RGD
Ensembl
PMID:8657307, PMID:17229286, PMID:17537984, PMID:21873635, PMID:17522159 GO_REF:0000107, MGI:MGI:5284782, RGD:1643596, RGD:13792537, RGD:8656002 NCBI chr 2:56,884,181...56,912,964
Ensembl chr 2:56,887,987...56,910,238
JBrowse link
G Grem1 gremlin 1, DAN family BMP antagonist ISO MGI:MGI:88180 (MGI:MGI:3714585|PMID:17522159), (MGI:MGI:4949995|PMID:21281623) RGD PMID:17522159, PMID:21281623 MGI:MGI:3714585, MGI:MGI:4949995 NCBI chr 3:105,203,309...105,214,989
Ensembl chr 3:105,203,309...105,214,989
JBrowse link
G Hoxb7 homeo box B7 ISO (MGI:MGI:3833510|PMID:17881463) RGD PMID:17881463 MGI:MGI:3833510 NCBI chr10:84,135,224...84,138,642
Ensembl chr10:84,135,116...84,138,637
JBrowse link
G Lgr4 leucine-rich repeat-containing G protein-coupled receptor 4 ISO (MGI:MGI:5006869|PMID:21523854) RGD PMID:21523854 MGI:MGI:5006869 NCBI chr 3:101,051,960...101,152,119
Ensembl chr 3:101,051,955...101,152,119
JBrowse link
G Lhx1 LIM homeobox 1 ISO
ISS
(MGI:MGI:3613206|PMID:16216236)
GO_REF:0000024
RGD
UniProt
PMID:16216236 GO_REF:0000024, MGI:MGI:3613206 NCBI chr10:71,843,991...71,849,293
Ensembl chr10:71,843,991...71,849,293
JBrowse link
G Maged1 MAGE family member D1 ISO (MGI:MGI:3848096|PMID:19268530) RGD PMID:19268530 MGI:MGI:3848096 NCBI chr  X:63,803,194...63,809,715
Ensembl chr  X:63,803,189...63,809,861
JBrowse link
G Nog noggin IEA
ISO
ISS
GO_REF:0000107
(MGI:MGI:2446986|PMID:12141440), (MGI:MGI:3714585|PMID:17522159)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:12141440, PMID:17522159 GO_REF:0000024, GO_REF:0000107, MGI:MGI:2446986, MGI:MGI:3714585 NCBI chr10:76,811,759...76,813,386
Ensembl chr10:76,811,759...76,813,386
JBrowse link
G Pax2 paired box 2 ISS
ISO
GO_REF:0000024
(MGI:MGI:3704067|PMID:17314325), (MGI:MGI:3833510|PMID:17881463), (MGI:MGI:5009394|PMID:17538188)
UniProt
RGD
PMID:17314325, PMID:17538188, PMID:17881463 GO_REF:0000024, MGI:MGI:3704067, MGI:MGI:3833510, MGI:MGI:5009394 NCBI chr 1:264,493,579...264,585,073
Ensembl chr 1:264,504,591...264,583,329
JBrowse link
G Pax8 paired box 8 ISO
ISS
(MGI:MGI:3704067|PMID:17314325)
GO_REF:0000024
RGD
UniProt
PMID:17314325 GO_REF:0000024, MGI:MGI:3704067 NCBI chr 3:1,527,316...1,586,019
Ensembl chr 3:1,527,279...1,584,946
JBrowse link
G Sall1 spalt-like transcription factor 1 ISO MGI:MGI:3603818 (MGI:MGI:5563280|PMID:24550112) RGD PMID:24550112 MGI:MGI:5563280 NCBI chr19:23,387,737...23,405,025
Ensembl chr19:23,389,375...23,405,039
JBrowse link
G Six1 SIX homeobox 1 ISO MGI:MGI:88180 (MGI:MGI:4949995|PMID:21281623), (MGI:MGI:5009396|PMID:17300925) RGD PMID:17300925, PMID:21281623 MGI:MGI:4949995, MGI:MGI:5009396 NCBI chr 6:95,929,060...95,934,296
Ensembl chr 6:95,929,060...95,934,296
JBrowse link
G Six4 SIX homeobox 4 ISO (MGI:MGI:5009396|PMID:17300925) RGD PMID:17300925 MGI:MGI:5009396 NCBI chr 6:95,984,868...95,999,709
Ensembl chr 6:95,984,868...95,998,529
JBrowse link
G Smo smoothened, frizzled class receptor IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(MGI:MGI:3611729|PMID:16396903)
Ensembl
UniProt
RGD
PMID:16396903 GO_REF:0000024, GO_REF:0000107, MGI:MGI:3611729 NCBI chr 4:57,019,941...57,041,779
Ensembl chr 4:57,019,941...57,042,770
JBrowse link
G Sox8 SRY-box transcription factor 8 ISO
ISS
(MGI:MGI:4939090|PMID:21212101)
GO_REF:0000024
RGD
UniProt
PMID:21212101 GO_REF:0000024, MGI:MGI:4939090 NCBI chr10:14,932,348...14,937,336
Ensembl chr10:14,932,348...14,937,336
JBrowse link
G Sox9 SRY-box transcription factor 9 ISO
ISS
(MGI:MGI:4939090|PMID:21212101)
GO_REF:0000024
RGD
UniProt
PMID:21212101 GO_REF:0000024, MGI:MGI:4939090 NCBI chr10:101,288,528...101,294,030
Ensembl chr10:101,288,489...101,293,379
JBrowse link
G Tgfb1 transforming growth factor, beta 1 IMP PMID:17537984 UniProt PMID:17537984 RGD:1643596 NCBI chr 1:82,480,875...82,497,196
Ensembl chr 1:82,480,195...82,497,199
JBrowse link
G Vegfa vascular endothelial growth factor A ISO (MGI:MGI:3611700|PMID:16291795) RGD PMID:16291795 MGI:MGI:3611700 NCBI chr 9:17,340,341...17,355,681
Ensembl chr 9:17,340,341...17,355,681
JBrowse link
G Wnt2b Wnt family member 2B ISO (MGI:MGI:2150217|PMID:11507767) RGD PMID:11507767 MGI:MGI:2150217 NCBI chr 2:207,433,771...207,457,094
Ensembl chr 2:207,440,886...207,455,258
JBrowse link
positive regulation of endothelial tube morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alox12 arachidonate 12-lipoxygenase, 12S type IMP RGD PMID:10733500 RGD:2313864 NCBI chr10:56,851,734...56,864,049
Ensembl chr10:56,851,734...56,864,005
JBrowse link
G Itgax integrin subunit alpha X ISO (PMID:30873824) RGD PMID:30873824 NCBI chr 1:199,555,560...199,576,948
Ensembl chr 1:199,555,722...199,576,932
JBrowse link
positive regulation of mesenchymal to epithelial transition involved in metanephros morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gdnf glial cell derived neurotrophic factor IEA
ISO
GO_REF:0000107
(MGI:MGI:81286|PMID:8657306)
Ensembl
RGD
PMID:8657306 GO_REF:0000107, MGI:MGI:81286 NCBI chr 2:56,884,181...56,912,964
Ensembl chr 2:56,887,987...56,910,238
JBrowse link
G Lif LIF, interleukin 6 family cytokine ISO
IEA
(PMID:20624457)
GO_REF:0000107
RGD
Ensembl
PMID:20624457 GO_REF:0000107 NCBI chr14:84,482,652...84,500,574
Ensembl chr14:84,482,674...84,500,642
JBrowse link
G Pax2 paired box 2 ISO
ISS
UniProtKB:Q00288 (MGI:MGI:2445273|PMID:12435636)
GO_REF:0000024
RGD
UniProt
PMID:12435636 GO_REF:0000024, MGI:MGI:2445273 NCBI chr 1:264,493,579...264,585,073
Ensembl chr 1:264,504,591...264,583,329
JBrowse link
G Pax8 paired box 8 ISO
ISS
(MGI:MGI:2445273|PMID:12435636)
GO_REF:0000024
RGD
UniProt
PMID:12435636 GO_REF:0000024, MGI:MGI:2445273 NCBI chr 3:1,527,316...1,586,019
Ensembl chr 3:1,527,279...1,584,946
JBrowse link
positive regulation of morphogenesis of an epithelium term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gja1 gap junction protein, alpha 1 ISO (PMID:30992345) RGD PMID:30992345 NCBI chr20:37,876,650...37,889,097
Ensembl chr20:37,876,650...37,889,089
JBrowse link
positive regulation of otic vesicle morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Stox1 storkhead box 1 ISO (MGI:MGI:5635320|PMID:25677106) RGD PMID:25677106 MGI:MGI:5635320 NCBI chr20:32,276,857...32,353,677
Ensembl chr20:32,276,658...32,353,677
JBrowse link
positive regulation of polarized epithelial cell differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahi1 Abelson helper integration site 1 ISO
ISS
(MGI:MGI:5306539|PMID:21959375)
GO_REF:0000024
RGD
UniProt
PMID:21959375 GO_REF:0000024, MGI:MGI:5306539 NCBI chr 1:16,478,127...16,601,769
Ensembl chr 1:16,478,127...16,601,769
JBrowse link
G Numb NUMB, endocytic adaptor protein ISO (MGI:MGI:4950299|PMID:21385765) RGD PMID:21385765 MGI:MGI:4950299 NCBI chr 6:107,279,917...107,325,345
Ensembl chr 6:107,279,920...107,325,345
JBrowse link
positive regulation of ureteric bud formation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gata3 GATA binding protein 3 ISO
ISS
(MGI:MGI:3822373|PMID:19112489)
GO_REF:0000024
RGD
UniProt
PMID:19112489 GO_REF:0000024, MGI:MGI:3822373 NCBI chr17:72,419,752...72,452,043
Ensembl chr17:72,429,618...72,450,681
JBrowse link
G Gdnf glial cell derived neurotrophic factor IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:8657307)
Ensembl
UniProt
RGD
PMID:8657307 GO_REF:0000024, GO_REF:0000107 NCBI chr 2:56,884,181...56,912,964
Ensembl chr 2:56,887,987...56,910,238
JBrowse link
G Six1 SIX homeobox 1 ISO (MGI:MGI:5009396|PMID:17300925) RGD PMID:17300925 MGI:MGI:5009396 NCBI chr 6:95,929,060...95,934,296
Ensembl chr 6:95,929,060...95,934,296
JBrowse link
G Six4 SIX homeobox 4 ISO (MGI:MGI:5009396|PMID:17300925) RGD PMID:17300925 MGI:MGI:5009396 NCBI chr 6:95,984,868...95,999,709
Ensembl chr 6:95,984,868...95,998,529
JBrowse link
positive regulation of Wnt signaling pathway, planar cell polarity pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase ISO MGI:MGI:87860 (MGI:MGI:4834959|PMID:20837657) RGD PMID:20837657 MGI:MGI:4834959 NCBI chr 3:10,041,820...10,145,076
Ensembl chr 3:10,041,826...10,144,388
JBrowse link
G Abl2 ABL proto-oncogene 2, non-receptor tyrosine kinase ISO MGI:MGI:87859 (MGI:MGI:4834959|PMID:20837657) RGD PMID:20837657 MGI:MGI:4834959 NCBI chr13:74,154,533...74,333,244
Ensembl chr13:74,154,835...74,333,244
JBrowse link
G Ankrd6 ankyrin repeat domain 6 ISO (MGI:MGI:4354654|PMID:19591803) RGD PMID:19591803 MGI:MGI:4354654 NCBI chr 5:48,052,610...48,167,568
Ensembl chr 5:48,052,401...48,194,294
JBrowse link
G Dab2 DAB adaptor protein 2 IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 2:55,747,353...55,768,848
Ensembl chr 2:55,747,318...55,768,270
JBrowse link
G Gpc3 glypican 3 IDA
IEA
ISO
IGI
PMID:15537637
GO_REF:0000107
MGI:MGI:2159356 (MGI:MGI:3529623|PMID:15537637)
Ensembl
RGD
PMID:15537637, PMID:15537637, PMID:15537637 GO_REF:0000107, MGI:MGI:3529623, RGD:8554067, RGD:8554067 NCBI chr  X:139,579,268...139,947,093
Ensembl chr  X:139,579,268...139,916,883
JBrowse link
G Mllt3 MLLT3, super elongation complex subunit ISO UniProtKB:Q69ZU8 (PMID:19591803) RGD PMID:19591803 NCBI chr 5:106,103,498...106,202,559
Ensembl chr 5:106,103,407...106,207,126
JBrowse link
G Nkd1 NKD inhibitor of WNT signaling pathway 1 ISO (MGI:MGI:5437442|PMID:11274398) RGD PMID:11274398 MGI:MGI:5437442 NCBI chr19:19,434,720...19,509,087
Ensembl chr19:19,436,333...19,509,087
JBrowse link
G Plekha4 pleckstrin homology domain containing A4 ISO
IBA
(PMID:31091453)
PMID:21873635
RGD PMID:31091453, PMID:21873635 RGD:13792537 NCBI chr 1:101,517,702...101,540,802
Ensembl chr 1:101,517,714...101,540,802
JBrowse link
positive regulation of wound healing, spreading of epidermal cells term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mtor mechanistic target of rapamycin kinase ISO (PMID:27919618) RGD PMID:27919618 NCBI chr 5:165,263,813...165,373,967
Ensembl chr 5:165,263,800...165,373,967
JBrowse link
G Rreb1 ras responsive element binding protein 1 ISO (PMID:18394891) RGD PMID:18394891 NCBI chr17:27,539,137...27,718,878
Ensembl chr17:27,539,133...27,665,266
JBrowse link
regulation of blood vessel branching term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fkbpl FKBP prolyl isomerase like ISO MGI:MGI:4431442|MGI:MGI:5558157 (MGI:MGI:5699248|PMID:25767277) RGD PMID:25767277 MGI:MGI:5699248 NCBI chr20:4,411,890...4,413,360
Ensembl chr20:4,411,876...4,413,366
JBrowse link
regulation of branch elongation involved in ureteric bud branching term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hnf1b HNF1 homeobox B ISO MGI:MGI:1857856 (MGI:MGI:4430439|PMID:20040500) RGD PMID:20040500 MGI:MGI:4430439 NCBI chr10:71,159,863...71,218,902
Ensembl chr10:71,159,869...71,218,902
JBrowse link
G Six1 SIX homeobox 1 ISO (MGI:MGI:5009396|PMID:17300925) RGD PMID:17300925 MGI:MGI:5009396 NCBI chr 6:95,929,060...95,934,296
Ensembl chr 6:95,929,060...95,934,296
JBrowse link
G Six4 SIX homeobox 4 ISO (MGI:MGI:5009396|PMID:17300925) RGD PMID:17300925 MGI:MGI:5009396 NCBI chr 6:95,984,868...95,999,709
Ensembl chr 6:95,984,868...95,998,529
JBrowse link
regulation of branching involved in lung morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sox9 SRY-box transcription factor 9 ISO (MGI:MGI:5523731|PMID:24191021) RGD PMID:24191021 MGI:MGI:5523731 NCBI chr10:101,288,528...101,294,030
Ensembl chr10:101,288,489...101,293,379
JBrowse link
regulation of branching involved in mammary gland duct morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cav3 caveolin 3 ISO MGI:MGI:2180558 (MGI:MGI:3830397|PMID:19164602) RGD PMID:19164602 MGI:MGI:3830397 NCBI chr 4:144,382,945...144,398,919
Ensembl chr 4:144,382,945...144,398,917
JBrowse link
G Etv5 ETS variant transcription factor 5 ISO (MGI:MGI:2667785|PMID:12871699) RGD PMID:12871699 MGI:MGI:2667785 NCBI chr11:82,194,657...82,252,145
Ensembl chr11:82,194,657...82,252,139
JBrowse link
G Phb2 prohibitin 2 ISO MGI:MGI:3574361 (MGI:MGI:3695669|PMID:17065319) RGD PMID:17065319 MGI:MGI:3695669 NCBI chr 4:157,230,769...157,235,375
Ensembl chr 4:157,230,769...157,235,367
JBrowse link
G Tgfb1 transforming growth factor, beta 1 ISO MGI:MGI:98958 (MGI:MGI:3761053|PMID:17898001) RGD PMID:17898001 MGI:MGI:3761053 NCBI chr 1:82,480,875...82,497,196
Ensembl chr 1:82,480,195...82,497,199
JBrowse link
G Wnt5a Wnt family member 5A ISO
IEA
MGI:MGI:96079|MGI:MGI:98725 (MGI:MGI:3761053|PMID:17898001)
GO_REF:0000107
RGD
Ensembl
PMID:17898001 GO_REF:0000107, MGI:MGI:3761053 NCBI chr16:4,469,451...4,490,271
Ensembl chr16:4,469,468...4,489,860
JBrowse link
regulation of branching involved in prostate gland morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 ISO
IEA
MGI:MGI:2158495 (MGI:MGI:3575593|PMID:15772937)
GO_REF:0000107
RGD
Ensembl
PMID:15772937 GO_REF:0000107, MGI:MGI:3575593 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
JBrowse link
G Bmp7 bone morphogenetic protein 7 ISO MGI:MGI:2136986 (MGI:MGI:3612905|PMID:16324690) RGD PMID:16324690 MGI:MGI:3612905 NCBI chr 3:170,879,972...170,955,820
Ensembl chr 3:170,879,973...170,955,399
JBrowse link
G Esr1 estrogen receptor 1 IEA
ISO
GO_REF:0000107
MGI:MGI:2150897 (MGI:MGI:3529408|PMID:15665095), (MGI:MGI:3839071|PMID:18755802)
Ensembl
RGD
PMID:15665095, PMID:18755802 GO_REF:0000107, MGI:MGI:3529408, MGI:MGI:3839071 NCBI chr 1:41,192,029...41,594,799
Ensembl chr 1:41,192,824...41,594,796
JBrowse link
G Hoxd13 homeo box D13 ISO MGI:MGI:1857871 (MGI:MGI:86772|PMID:9097018) RGD PMID:9097018 MGI:MGI:86772 NCBI chr 3:61,590,376...61,593,692
Ensembl chr 3:61,590,376...61,593,692
JBrowse link
G Rxra retinoid X receptor alpha ISO
IEA
MGI:MGI:2385918 (MGI:MGI:2385387|PMID:12183441)
GO_REF:0000107
RGD
Ensembl
PMID:12183441 GO_REF:0000107, MGI:MGI:2385387 NCBI chr 3:6,272,560...6,295,354
Ensembl chr 3:6,211,789...6,295,908
JBrowse link
G Sfrp1 secreted frizzled-related protein 1 ISO
IEA
MGI:MGI:3796251 (MGI:MGI:3795332|PMID:18371946)
GO_REF:0000107
RGD
Ensembl
PMID:18371946 GO_REF:0000107, MGI:MGI:3795332 NCBI chr16:73,372,007...73,410,777
Ensembl chr16:73,372,007...73,410,777
JBrowse link
regulation of branching involved in salivary gland morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Btbd7 BTB domain containing 7 ISO (MGI:MGI:4820442|PMID:20671187) RGD PMID:20671187 MGI:MGI:4820442 NCBI chr 6:126,658,398...126,748,497
Ensembl chr 6:126,661,634...126,710,858
JBrowse link
G Cdh1 cadherin 1 ISO (MGI:MGI:3826736|PMID:18816447) RGD PMID:18816447 MGI:MGI:3826736 NCBI chr19:38,768,467...38,838,395
Ensembl chr19:38,768,467...38,838,395
JBrowse link
G Snai2 snail family transcriptional repressor 2 ISO (MGI:MGI:4820442|PMID:20671187) RGD PMID:20671187 MGI:MGI:4820442 NCBI chr11:90,404,421...90,406,730
Ensembl chr11:90,403,333...90,406,797
JBrowse link
G Tnf tumor necrosis factor ISO (MGI:MGI:1931422|PMID:11241200) RGD PMID:11241200 MGI:MGI:1931422 NCBI chr20:5,189,382...5,192,000
Ensembl chr20:5,189,390...5,192,000
JBrowse link
regulation of branching involved in salivary gland morphogenesis by epithelial-mesenchymal signaling term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pdgfa platelet derived growth factor subunit A ISO
ISS
(MGI:MGI:3813176|PMID:18559345)
GO_REF:0000024
RGD
UniProt
PMID:18559345 GO_REF:0000024, MGI:MGI:3813176 NCBI chr12:17,734,141...17,756,186
Ensembl chr12:17,734,133...17,755,285
JBrowse link
regulation of branching involved in salivary gland morphogenesis by extracellular matrix-epithelial cell signaling term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ntn4 netrin 4 ISO (MGI:MGI:3722516|PMID:17588941) RGD PMID:17588941 MGI:MGI:3722516 NCBI chr 7:34,533,543...34,649,330
Ensembl chr 7:34,533,543...34,649,481
JBrowse link
regulation of branching involved in salivary gland morphogenesis by mesenchymal-epithelial signaling term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf10 fibroblast growth factor 10 ISO (MGI:MGI:3813176|PMID:18559345) RGD PMID:18559345 MGI:MGI:3813176 NCBI chr 2:51,673,480...51,747,533
Ensembl chr 2:51,672,722...51,750,369
JBrowse link
G Fgf7 fibroblast growth factor 7 ISO
IEA
(MGI:MGI:3813176|PMID:18559345)
GO_REF:0000107
RGD
Ensembl
PMID:18559345 GO_REF:0000107, MGI:MGI:3813176 NCBI chr 3:118,315,859...118,368,464
Ensembl chr 3:118,317,761...118,366,872
JBrowse link
G Fgfr1 Fibroblast growth factor receptor 1 ISO
IEA
(MGI:MGI:3813176|PMID:18559345)
GO_REF:0000107
RGD
Ensembl
PMID:18559345 GO_REF:0000107, MGI:MGI:3813176 NCBI chr16:71,265,390...71,319,046
Ensembl chr16:71,266,248...71,319,449
JBrowse link
G Hgf hepatocyte growth factor ISO (MGI:MGI:2677549|PMID:14517989)
(PMID:14517989)
RGD PMID:14517989 MGI:MGI:2677549 NCBI chr 4:15,435,460...15,505,377
Ensembl chr 4:15,433,295...15,505,362
JBrowse link
G Met MET proto-oncogene, receptor tyrosine kinase ISO (MGI:MGI:2677549|PMID:14517989) RGD PMID:14517989 MGI:MGI:2677549 NCBI chr 4:44,747,467...44,854,628
Ensembl chr 4:44,774,741...44,852,665
JBrowse link
regulation of branching involved in ureteric bud morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Six2 SIX homeobox 2 ISO (MGI:MGI:3691408|PMID:17036046) RGD PMID:17036046 MGI:MGI:3691408 NCBI chr 6:8,952,572...8,955,893
Ensembl chr 6:8,952,572...8,956,276
JBrowse link
regulation of endothelial tube morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adamts12 ADAM metallopeptidase with thrombospondin type 1 motif, 12 ISO (PMID:17895370) RGD PMID:17895370 NCBI chr 2:61,039,072...61,340,687
Ensembl chr 2:61,039,053...61,340,697
JBrowse link
G Cxcl10 C-X-C motif chemokine ligand 10 ISO (PMID:16484616) RGD PMID:16484616 NCBI chr14:17,210,733...17,212,930
Ensembl chr14:17,210,733...17,212,930
JBrowse link
G Fgf1 fibroblast growth factor 1 ISO
ISS
(PMID:23469107)
GO_REF:0000024
RGD
UniProt
PMID:23469107 GO_REF:0000024 NCBI chr18:32,273,830...32,359,831
Ensembl chr18:32,273,770...32,359,824
JBrowse link
G Foxp1 forkhead box P1 ISO (PMID:24023716) RGD PMID:24023716 NCBI chr 4:131,362,178...131,963,466
Ensembl chr 4:131,366,744...131,694,755
JBrowse link
regulation of establishment of planar polarity term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Jhy junctional cadherin complex regulator ISO
IEA
MGI:MGI:5437647 (MGI:MGI:6103256|PMID:29211732)
GO_REF:0000107
RGD
Ensembl
PMID:29211732 GO_REF:0000107, MGI:MGI:6103256 NCBI chr 8:45,084,067...45,140,570
Ensembl chr 8:45,084,320...45,137,893
JBrowse link
G Sapcd2 suppressor APC domain containing 2 ISO (MGI:MGI:5882149|PMID:26766442) RGD PMID:26766442 MGI:MGI:5882149 NCBI chr 3:2,590,355...2,597,283
Ensembl chr 3:2,591,331...2,596,583
JBrowse link
G Sfrp1 secreted frizzled-related protein 1 ISO MGI:MGI:108078|MGI:MGI:1860298|MGI:MGI:2135272 (MGI:MGI:3839161|PMID:19300477) RGD PMID:19300477 MGI:MGI:3839161 NCBI chr16:73,372,007...73,410,777
Ensembl chr16:73,372,007...73,410,777
JBrowse link
G Sfrp2 secreted frizzled-related protein 2 ISO MGI:MGI:1860298|MGI:MGI:2135272|MGI:MGI:892014 (MGI:MGI:3839161|PMID:19300477) RGD PMID:19300477 MGI:MGI:3839161 NCBI chr 2:182,723,732...182,731,277
Ensembl chr 2:182,723,854...182,731,764
JBrowse link
G Sfrp5 secreted frizzled-related protein 5 ISO MGI:MGI:108078|MGI:MGI:2135272|MGI:MGI:892014 (MGI:MGI:3839161|PMID:19300477) RGD PMID:19300477 MGI:MGI:3839161 NCBI chr 1:261,442,108...261,446,570
Ensembl chr 1:261,442,108...261,446,570
JBrowse link
G Spag6l sperm associated antigen 6-like ISO MGI:MGI:2662475 (MGI:MGI:5691632|PMID:25393619) RGD PMID:25393619 MGI:MGI:5691632 NCBI chr11:88,424,493...88,517,910
Ensembl chr11:88,424,414...88,508,601
JBrowse link
G Vangl2 VANGL planar cell polarity protein 2 ISO MGI:MGI:108078|MGI:MGI:1860298|MGI:MGI:892014 (MGI:MGI:3839161|PMID:19300477) RGD PMID:19300477 MGI:MGI:3839161 NCBI chr13:90,379,203...90,405,627
Ensembl chr13:90,380,632...90,405,591
JBrowse link
regulation of establishment of planar polarity involved in neural tube closure term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sec24b SEC24 homolog B, COPII coat complex component ISO MGI:MGI:4440619|MGI:MGI:4440621 (MGI:MGI:4438817|PMID:19966784) RGD PMID:19966784 MGI:MGI:4438817 NCBI chr 2:230,286,886...230,356,887
Ensembl chr 2:230,287,296...230,356,919
JBrowse link
regulation of mesenchymal to epithelial transition involved in metanephros morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt9b Wnt family member 9B ISO MGI:MGI:3526437 (MGI:MGI:3588895|PMID:16054034) RGD PMID:16054034 MGI:MGI:3588895 NCBI chr10:91,785,892...91,808,061
Ensembl chr10:91,785,893...91,807,937
JBrowse link
regulation of polarized epithelial cell differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ajap1 adherens junctions associated protein 1 IEA
ISO
GO_REF:0000107
(PMID:14595118)
Ensembl
RGD
PMID:14595118 GO_REF:0000107 NCBI chr 5:170,615,885...170,679,315
Ensembl chr 5:170,615,886...170,679,315
JBrowse link
regulation of prostatic bud formation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ar androgen receptor ISO MGI:MGI:1099809 (MGI:MGI:2673763|PMID:12941620) RGD PMID:12941620 MGI:MGI:2673763 NCBI chr  X:67,656,253...67,828,998
Ensembl chr  X:67,656,253...67,829,026
JBrowse link
G Shh sonic hedgehog signaling molecule IEA
ISO
GO_REF:0000107
(MGI:MGI:2386799|PMID:12221011), (MGI:MGI:3785350|PMID:18393306)
Ensembl
RGD
PMID:12221011, PMID:18393306 GO_REF:0000107, MGI:MGI:2386799, MGI:MGI:3785350 NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691
JBrowse link
regulation of ureteric bud formation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gdnf glial cell derived neurotrophic factor IDA PMID:19112489 UniProt PMID:19112489 RGD:8656008 NCBI chr 2:56,884,181...56,912,964
Ensembl chr 2:56,887,987...56,910,238
JBrowse link
regulation of Wnt signaling pathway, planar cell polarity pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dact1 dishevelled-binding antagonist of beta-catenin 1 ISO
IBA
MGI:MGI:2135272 (MGI:MGI:4359544|PMID:19701191), (MGI:MGI:4457465|PMID:20145239)
PMID:21873635
RGD PMID:19701191, PMID:20145239, PMID:21873635 MGI:MGI:4359544, MGI:MGI:4457465, RGD:13792537 NCBI chr 6:93,740,440...93,751,003
Ensembl chr 6:93,740,586...93,749,809
JBrowse link
G Mks1 MKS transition zone complex subunit 1 ISO
IEA
MGI:MGI:4887578 (MGI:MGI:4868517|PMID:21045211)
GO_REF:0000107
RGD
Ensembl
PMID:21045211 GO_REF:0000107, MGI:MGI:4868517 NCBI chr10:75,149,814...75,160,481
Ensembl chr10:75,149,814...75,160,480
JBrowse link
G Znrf3 zinc and ring finger 3 ISO (MGI:MGI:5424263|PMID:22575959) RGD PMID:22575959 MGI:MGI:5424263 NCBI chr14:85,527,099...85,586,294 JBrowse link
renal vesicle induction term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sox8 SRY-box transcription factor 8 ISO
ISS
(MGI:MGI:4939090|PMID:21212101)
GO_REF:0000024
RGD
UniProt
PMID:21212101 GO_REF:0000024, MGI:MGI:4939090 NCBI chr10:14,932,348...14,937,336
Ensembl chr10:14,932,348...14,937,336
JBrowse link
G Sox9 SRY-box transcription factor 9 ISO
ISS
(MGI:MGI:4939090|PMID:21212101)
GO_REF:0000024
RGD
UniProt
PMID:21212101 GO_REF:0000024, MGI:MGI:4939090 NCBI chr10:101,288,528...101,294,030
Ensembl chr10:101,288,489...101,293,379
JBrowse link
G Wnt4 Wnt family member 4 ISO
IEA
(MGI:MGI:2150217|PMID:11507767)
GO_REF:0000107
RGD
Ensembl
PMID:11507767 GO_REF:0000107, MGI:MGI:2150217 NCBI chr 5:155,649,238...155,668,065
Ensembl chr 5:155,649,217...155,672,579
JBrowse link
Wnt signaling pathway, planar cell polarity pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cthrc1 collagen triple helix repeat containing 1 ISO MGI:MGI:3815067 (MGI:MGI:3814781|PMID:18606138) RGD PMID:18606138 MGI:MGI:3814781 NCBI chr 7:77,966,722...77,977,004
Ensembl chr 7:77,966,722...77,977,004
JBrowse link
G Dvl1 dishevelled segment polarity protein 1 ISO (PMID:12805222)
MGI:MGI:106613|MGI:MGI:1351660|MGI:MGI:2137230 (MGI:MGI:3029636|PMID:14966280), (MGI:MGI:3589836|PMID:16116426)
RGD PMID:12805222, PMID:14966280, PMID:16116426 MGI:MGI:3029636, MGI:MGI:3589836 NCBI chr 5:173,295,948...173,308,014
Ensembl chr 5:173,296,270...173,307,945
JBrowse link
G Dvl2 dishevelled segment polarity protein 2 ISO (PMID:12805222)
MGI:MGI:94941 (MGI:MGI:3589836|PMID:16116426)
RGD PMID:12805222, PMID:16116426 MGI:MGI:3589836 NCBI chr10:56,609,810...56,619,269
Ensembl chr10:56,610,051...56,619,269
JBrowse link
G Dvl3 dishevelled segment polarity protein 3 ISO (PMID:12805222)
MGI:MGI:2135272 (MGI:MGI:3821448|PMID:19008950)
RGD PMID:12805222, PMID:19008950 MGI:MGI:3821448 NCBI chr11:84,051,177...84,068,479
Ensembl chr11:84,051,078...84,068,302
JBrowse link
G Fzd6 frizzled class receptor 6 ISO (MGI:MGI:3814781|PMID:18606138) RGD PMID:18606138 MGI:MGI:3814781 NCBI chr 7:77,898,329...77,931,034
Ensembl chr 7:77,899,322...77,931,029
JBrowse link
G Med12 mediator complex subunit 12 ISO MGI:MGI:4839486 (MGI:MGI:4839483|PMID:20630950) RGD PMID:20630950 MGI:MGI:4839483 NCBI chr  X:71,174,653...71,197,812
Ensembl chr  X:71,174,699...71,197,812
JBrowse link
G Rac1 Rac family small GTPase 1 ISO MGI:MGI:98958 (MGI:MGI:3829860|PMID:18953410) RGD PMID:18953410 MGI:MGI:3829860 NCBI chr12:13,090,316...13,111,841
Ensembl chr12:13,090,172...13,111,873
JBrowse link
G Ror2 receptor tyrosine kinase-like orphan receptor 2 ISO MGI:MGI:2183225 (MGI:MGI:3814781|PMID:18606138) RGD PMID:18606138 MGI:MGI:3814781 NCBI chr17:11,953,552...12,134,386
Ensembl chr17:11,953,552...12,134,386
JBrowse link
G Sfrp1 secreted frizzled-related protein 1 ISO (MGI:MGI:3795332|PMID:18371946) RGD PMID:18371946 MGI:MGI:3795332 NCBI chr16:73,372,007...73,410,777
Ensembl chr16:73,372,007...73,410,777
JBrowse link
G Vangl2 VANGL planar cell polarity protein 2 ISO
IBA
MGI:MGI:1857642|MGI:MGI:1891740|MGI:MGI:98958 (MGI:MGI:3589836|PMID:16116426), (MGI:MGI:3714704|PMID:17433286), (MGI:MGI:4359544|PMID:19701191)
PMID:21873635
RGD PMID:16116426, PMID:17433286, PMID:19701191, PMID:21873635 MGI:MGI:3589836, MGI:MGI:3714704, MGI:MGI:4359544, RGD:13792537 NCBI chr13:90,379,203...90,405,627
Ensembl chr13:90,380,632...90,405,591
JBrowse link
G Wnt5a Wnt family member 5A IDA
ISO
PMID:15537637
MGI:MGI:1857617|MGI:MGI:2135272|MGI:MGI:97845 (MGI:MGI:3714704|PMID:17433286), (MGI:MGI:3829860|PMID:18953410), (MGI:MGI:3839161|PMID:19300477), (MGI:MGI:4830282|PMID:19056682)
RGD PMID:17433286, PMID:18953410, PMID:19056682, PMID:19300477, PMID:15537637 MGI:MGI:3714704, MGI:MGI:3829860, MGI:MGI:3839161, MGI:MGI:4830282, RGD:8554067 NCBI chr16:4,469,451...4,490,271
Ensembl chr16:4,469,468...4,489,860
JBrowse link
G Wnt7a Wnt family member 7A ISO (PMID:15802269) RGD PMID:15802269 NCBI chr 4:122,994,425...123,040,609
Ensembl chr 4:122,994,425...123,040,609
JBrowse link
G Wnt9b Wnt family member 9B ISO MGI:MGI:3526437 (MGI:MGI:4353952|PMID:19543268) RGD PMID:19543268 MGI:MGI:4353952 NCBI chr10:91,785,892...91,808,061
Ensembl chr10:91,785,893...91,807,937
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20014
    developmental process 6812
      anatomical structure morphogenesis 2872
        regulation of anatomical structure morphogenesis 1130
          regulation of morphogenesis of an epithelium 116
            negative regulation of morphogenesis of an epithelium + 17
            positive regulation of morphogenesis of an epithelium + 41
            regulation of BMP signaling pathway involved in heart jogging 0
            regulation of blood vessel branching + 4
            regulation of branching involved in lung morphogenesis + 7
            regulation of branching involved in mammary gland duct morphogenesis + 5
            regulation of branching involved in prostate gland morphogenesis 6
            regulation of branching involved in salivary gland morphogenesis + 11
            regulation of branching involved in ureteric bud morphogenesis + 26
            regulation of cell proliferation involved in imaginal disc-derived wing morphogenesis 0
            regulation of convergent extension involved in axis elongation + 1
            regulation of convergent extension involved in gastrulation + 0
            regulation of endothelial tube morphogenesis + 6
            regulation of epiboly involved in gastrulation with mouth forming second + 0
            regulation of epithelial cell proliferation involved in mammary gland bud elongation 0
            regulation of epithelial tube formation + 19
            regulation of establishment of planar polarity + 41
            regulation of heart looping + 1
            regulation of imaginal disc-derived leg joint morphogenesis + 0
            regulation of imaginal disc-derived wing vein specification + 0
            regulation of mesenchymal to epithelial transition involved in metanephros morphogenesis + 8
            regulation of otic vesicle morphogenesis + 1
            regulation of polarized epithelial cell differentiation + 3
            regulation of pre-tubular aggregate formation by cell-cell signaling 0
            regulation of prostatic bud formation + 6
            regulation of wound healing, spreading of epidermal cells + 6
Path 2
Term Annotations click to browse term
  biological_process 20014
    developmental process 6812
      anatomical structure development 6256
        anatomical structure morphogenesis 2872
          tissue morphogenesis 694
            morphogenesis of an epithelium 582
              regulation of morphogenesis of an epithelium 116
                negative regulation of morphogenesis of an epithelium + 17
                positive regulation of morphogenesis of an epithelium + 41
                regulation of BMP signaling pathway involved in heart jogging 0
                regulation of blood vessel branching + 4
                regulation of branching involved in lung morphogenesis + 7
                regulation of branching involved in mammary gland duct morphogenesis + 5
                regulation of branching involved in prostate gland morphogenesis 6
                regulation of branching involved in salivary gland morphogenesis + 11
                regulation of branching involved in ureteric bud morphogenesis + 26
                regulation of cell proliferation involved in imaginal disc-derived wing morphogenesis 0
                regulation of convergent extension involved in axis elongation + 1
                regulation of convergent extension involved in gastrulation + 0
                regulation of endothelial tube morphogenesis + 6
                regulation of epiboly involved in gastrulation with mouth forming second + 0
                regulation of epithelial cell proliferation involved in mammary gland bud elongation 0
                regulation of epithelial tube formation + 19
                regulation of establishment of planar polarity + 41
                regulation of heart looping + 1
                regulation of imaginal disc-derived leg joint morphogenesis + 0
                regulation of imaginal disc-derived wing vein specification + 0
                regulation of mesenchymal to epithelial transition involved in metanephros morphogenesis + 8
                regulation of otic vesicle morphogenesis + 1
                regulation of polarized epithelial cell differentiation + 3
                regulation of pre-tubular aggregate formation by cell-cell signaling 0
                regulation of prostatic bud formation + 6
                regulation of wound healing, spreading of epidermal cells + 6
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.