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ONTOLOGY REPORT - ANNOTATIONS


Term:cellular response to nerve growth factor stimulus
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Accession:GO:1990090 term browser browse the term
Definition:A process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nerve growth factor stimulus.
Synonyms:exact_synonym: cellular response to NGF


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cellular response to nerve growth factor stimulus term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acap2 ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 IDA PMID:23572513 UniProt PMID:23572513 RGD:8554201 NCBI chr11:73,078,966...73,193,496
Ensembl chr11:73,078,982...73,191,132
JBrowse link
G Akt1 AKT serine/threonine kinase 1 IDA
ISO
PMID:20605787
(PMID:20605787)
RGD PMID:20605787, PMID:20605787 RGD:10402036 NCBI chr 6:137,218,398...137,239,970
Ensembl chr 6:137,218,376...137,236,258
JBrowse link
G Apc APC regulator of WNT signaling pathway IEP RGD PMID:22399805 RGD:7245986 NCBI chr18:27,011,710...27,106,323
Ensembl chr18:27,047,382...27,105,531
JBrowse link
G App amyloid beta precursor protein IEP RGD PMID:10821917 RGD:10054256 NCBI chr11:24,425,013...24,641,872
Ensembl chr11:24,425,005...24,641,858
JBrowse link
G Arf6 ADP-ribosylation factor 6 IDA PMID:26446845 UniProt PMID:26446845 RGD:11554955 NCBI chr 6:91,697,109...91,698,257
Ensembl chr 6:91,697,109...91,698,255
JBrowse link
G Arpc2 actin related protein 2/3 complex, subunit 2 IEP RGD PMID:10797548 RGD:11049163 NCBI chr 9:81,518,163...81,548,871
Ensembl chr 9:81,518,176...81,548,871
JBrowse link
G Arpc3 actin related protein 2/3 complex, subunit 3 IEP RGD PMID:10797548 RGD:11049163 NCBI chr12:39,653,951...39,667,817
Ensembl chr12:39,653,953...39,667,849
JBrowse link
G Bdnf brain-derived neurotrophic factor IEP RGD PMID:21958434 RGD:8657122 NCBI chr 3:100,768,637...100,819,216
Ensembl chr 3:100,768,637...100,819,210
JBrowse link
G Bptf bromodomain PHD finger transcription factor IEP RGD PMID:11640947 RGD:9586055 NCBI chr10:95,248,573...95,350,162
Ensembl chr10:95,250,294...95,349,789
JBrowse link
G Braf B-Raf proto-oncogene, serine/threonine kinase IEP RGD PMID:12138204 RGD:11567269 NCBI chr 4:67,389,331...67,520,549
Ensembl chr 4:67,396,192...67,520,356
JBrowse link
G Calca calcitonin-related polypeptide alpha IEP
ISO
(MGI:MGI:5571523|PMID:24760869) RGD PMID:24760869, PMID:21958434 MGI:MGI:5571523, RGD:8657122 NCBI chr 1:184,184,018...184,188,922
Ensembl chr 1:184,184,020...184,188,911
JBrowse link
G Cbl Cbl proto-oncogene IEP RGD PMID:19546888 RGD:11038823 NCBI chr 8:48,481,256...48,564,775
Ensembl chr 8:48,489,036...48,564,722
JBrowse link
G Cdc5l cell division cycle 5-like IDA RGD PMID:20629186 RGD:10045890 NCBI chr 9:17,949,764...17,988,514
Ensembl chr 9:17,949,764...17,988,509
JBrowse link
G Cib1 calcium and integrin binding 1 ISO
ISS
(PMID:21215777)
GO_REF:0000024
RGD
UniProt
PMID:21215777 GO_REF:0000024 NCBI chr 1:142,014,962...142,020,461
Ensembl chr 1:142,014,958...142,020,525
JBrowse link
G Creb1 cAMP responsive element binding protein 1 IEP RGD PMID:18193038 RGD:10059421 NCBI chr 9:71,229,753...71,298,994
Ensembl chr 9:71,230,108...71,293,435
JBrowse link
G Crk CRK proto-oncogene, adaptor protein IDA RGD PMID:15128873 RGD:1642627 NCBI chr10:63,829,731...63,855,999
Ensembl chr10:63,829,807...63,852,780
JBrowse link
G Csnk1d casein kinase 1, delta IEP RGD PMID:21698236 RGD:10059659 NCBI chr10:110,147,786...110,182,413
Ensembl chr10:110,148,600...110,182,408
JBrowse link
G Csnk1e casein kinase 1, epsilon IEP RGD PMID:21698236 RGD:10059659 NCBI chr 7:120,651,976...120,675,559
Ensembl chr 7:120,651,881...120,672,359
JBrowse link
G Cstf2 cleavage stimulation factor subunit 2 IEP RGD PMID:23948079 RGD:9686373 NCBI chr  X:104,882,726...104,909,746
Ensembl chr  X:104,882,704...104,909,739
JBrowse link
G Dnmt1 DNA methyltransferase 1 IEP RGD PMID:10407183 RGD:9588607 NCBI chr 8:21,922,515...21,968,495
Ensembl chr 8:21,922,515...21,968,495
JBrowse link
G Dync1h1 dynein cytoplasmic 1 heavy chain 1 IEP RGD PMID:8922673 RGD:13207348 NCBI chr 6:134,958,854...135,085,769
Ensembl chr 6:134,958,854...135,085,769
JBrowse link
G Dync1i2 dynein cytoplasmic 1 intermediate chain 2 IEP RGD PMID:11536324 RGD:13207410 NCBI chr 3:57,817,677...57,868,854
Ensembl chr 3:57,817,693...57,868,854
JBrowse link
G Dync1li1 dynein cytoplasmic 1 light intermediate chain 1 IDA RGD PMID:11536324 RGD:13207410 NCBI chr 8:122,743,274...122,776,801
Ensembl chr 8:122,743,189...122,776,806
JBrowse link
G Dync1li2 dynein, cytoplasmic 1 light intermediate chain 2 IDA RGD PMID:11536324 RGD:13207410 NCBI chr19:740,007...762,897
Ensembl chr19:740,028...762,897
JBrowse link
G E2f1 E2F transcription factor 1 IDA RGD PMID:18367454 RGD:8693614 NCBI chr 3:150,062,895...150,073,721
Ensembl chr 3:150,047,826...150,073,721
JBrowse link
G Eef1a1 eukaryotic translation elongation factor 1 alpha 1 IEP RGD PMID:11907030 RGD:1304240 NCBI chr 8:85,838,594...85,841,816
Ensembl chr 8:85,838,869...85,840,818
JBrowse link
G Ehd1 EH-domain containing 1 IDA PMID:23572513 UniProt PMID:23572513 RGD:8554201 NCBI chr 1:221,644,867...221,667,242
Ensembl chr 1:221,644,867...221,667,239
JBrowse link
G Elavl4 ELAV like RNA binding protein 4 IEP RGD PMID:12859688, PMID:9514914 RGD:1579855, RGD:9685344 NCBI chr 5:130,001,387...130,144,557
Ensembl chr 5:130,001,372...130,085,838
JBrowse link
G Ep300 E1A binding protein p300 IEP RGD PMID:20399742 RGD:7364749 NCBI chr 7:122,818,194...122,889,055
Ensembl chr 7:122,818,975...122,861,296
JBrowse link
G Fgfr1 Fibroblast growth factor receptor 1 IEP RGD PMID:9011767 RGD:10402043 NCBI chr16:71,265,390...71,319,046
Ensembl chr16:71,266,248...71,319,449
JBrowse link
G Foxo3 forkhead box O3 IEP RGD PMID:24183892 RGD:9495918 NCBI chr20:46,428,078...46,519,156
Ensembl chr20:46,428,124...46,519,144
JBrowse link
G Hes1 hes family bHLH transcription factor 1 IMP RGD PMID:9389649 RGD:9685378 NCBI chr11:74,312,837...74,315,249
Ensembl chr11:74,312,806...74,315,248
JBrowse link
G Hspa5 heat shock protein family A (Hsp70) member 5 IEP RGD PMID:10936191 RGD:11354963 NCBI chr 3:13,838,304...13,842,763
Ensembl chr 3:13,838,304...13,842,762
JBrowse link
G Id1 inhibitor of DNA binding 1, HLH protein IEP RGD PMID:7623812 RGD:9686118 NCBI chr 3:148,214,623...148,216,715
Ensembl chr 3:148,215,540...148,216,718
JBrowse link
G Kat2a lysine acetyltransferase 2A IEP RGD PMID:15496412 RGD:2312271 NCBI chr10:88,611,586...88,619,558
Ensembl chr10:88,611,586...88,619,537
JBrowse link
G Kidins220 kinase D-interacting substrate 220 IDA PMID:17724123 UniProt PMID:17724123 RGD:8554481 NCBI chr 6:44,225,142...44,322,938
Ensembl chr 6:44,225,233...44,322,938
JBrowse link
G Kif1b kinesin family member 1B IEP RGD PMID:24469107 RGD:12738402 NCBI chr 5:165,994,803...166,133,497
Ensembl chr 5:165,938,576...166,133,491
JBrowse link
G Kif5a kinesin family member 5A IEP RGD PMID:8963445 RGD:12793074 NCBI chr 7:70,515,832...70,552,897
Ensembl chr 7:70,513,343...70,556,827
JBrowse link
G L1cam L1 cell adhesion molecule IEP RGD PMID:3511068 RGD:11570521 NCBI chr  X:156,901,244...156,928,064
Ensembl chr  X:156,909,913...156,928,057
JBrowse link
G Magi2 membrane associated guanylate kinase, WW and PDZ domain containing 2 IDA PMID:17724123 UniProt PMID:17724123 RGD:8554481 NCBI chr 4:10,995,241...12,472,423
Ensembl chr 4:10,995,234...11,610,518
JBrowse link
G Micall1 MICAL-like 1 IDA PMID:23572513 UniProt PMID:23572513 RGD:8554201 NCBI chr 7:120,343,900...120,375,151
Ensembl chr 7:120,345,180...120,375,156
JBrowse link
G Myoc myocilin IEP RGD PMID:17663725 RGD:7401258 NCBI chr13:80,517,531...80,527,928
Ensembl chr13:80,517,536...80,527,928
JBrowse link
G Nf1 neurofibromin 1 IEP RGD PMID:8892969 RGD:12789704 NCBI chr10:66,732,460...66,928,706
Ensembl chr10:66,690,133...66,928,903
JBrowse link
G Ntrk1 neurotrophic receptor tyrosine kinase 1 IDA
IBA
ISO
PMID:17724123
PMID:26446845
PMID:21873635
(PMID:1281417)
(MGI:MGI:5571523|PMID:24760869)
RGD PMID:1281417, PMID:24760869, PMID:17724123, PMID:26446845, PMID:21873635 MGI:MGI:5571523, RGD:8554481, RGD:11554955, RGD:13792537 NCBI chr 2:187,143,568...187,160,373
Ensembl chr 2:187,143,568...187,160,373
JBrowse link
G Ntrk2 neurotrophic receptor tyrosine kinase 2 IEP
IBA
PMID:21873635 RGD
GO_Central
PMID:21958434, PMID:21873635 RGD:8657122, RGD:13792537 NCBI chr17:5,934,651...6,245,778
Ensembl chr17:5,933,729...6,244,676
JBrowse link
G Ntrk3 neurotrophic receptor tyrosine kinase 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:139,890,537...140,262,503
Ensembl chr 1:139,890,560...140,262,503
JBrowse link
G Nts neurotensin IEP RGD PMID:7898306 RGD:9743905 NCBI chr 7:44,111,594...44,120,998
Ensembl chr 7:44,111,151...44,121,130
JBrowse link
G Optn optineurin IEP RGD PMID:17663725 RGD:7401258 NCBI chr17:77,167,700...77,218,374
Ensembl chr17:77,167,740...77,218,389
JBrowse link
G Pten phosphatase and tensin homolog IEP RGD PMID:10662831 RGD:12801496 NCBI chr 1:251,421,814...251,487,634
Ensembl chr 1:251,421,596...251,487,832
JBrowse link
G Rab35 RAB35, member RAS oncogene family IDA PMID:23572513 UniProt PMID:23572513 RGD:8554201 NCBI chr12:46,704,274...46,718,404
Ensembl chr12:46,704,275...46,718,355
JBrowse link
G Rap1a RAP1A, member of RAS oncogene family IDA
IEP
PMID:17724123 UniProt
RGD
PMID:17724123, PMID:17822405 RGD:8554481, RGD:10040965 NCBI chr 2:208,193,950...208,215,186
Ensembl chr 2:208,193,954...208,215,187
JBrowse link
G Rapgef1 Rap guanine nucleotide exchange factor 1 ISO (PMID:17724123) RGD PMID:17724123 NCBI chr 3:8,189,594...8,307,077
Ensembl chr 3:8,192,575...8,304,976
JBrowse link
G Rapgef2 Rap guanine nucleotide exchange factor 2 IDA PMID:17724123 UniProt PMID:17724123 RGD:8554481 NCBI chr 2:177,836,191...178,057,378
Ensembl chr 2:177,836,202...178,057,157
JBrowse link
G Rapgef4 Rap guanine nucleotide exchange factor 4 IEP RGD PMID:25126967 RGD:9850100 NCBI chr 3:58,632,338...58,925,127
Ensembl chr 3:58,632,476...58,924,038
JBrowse link
G Rpl8 ribosomal protein L8 IEP RGD PMID:11922865 RGD:11039448 NCBI chr 7:117,967,608...117,969,886
Ensembl chr 7:118,507,224...118,509,256
JBrowse link
G Rpl9 ribosomal protein L9 IEP RGD PMID:11922865 RGD:11039448 NCBI chr14:44,524,419...44,527,613
Ensembl chr14:44,524,416...44,527,613
JBrowse link
G Rps3 ribosomal protein S3 IDA PMID:20605787 UniProt PMID:20605787 RGD:10402036 NCBI chr 1:164,435,868...164,441,167
Ensembl chr 1:164,435,878...164,441,167
JBrowse link
G Serpine1 serpin family E member 1 IEP RGD PMID:21596853 RGD:8547918 NCBI chr12:22,641,104...22,651,482
Ensembl chr12:22,641,104...22,651,482
JBrowse link
G Snx27 sorting nexin 27 IEP RGD PMID:16076023 RGD:13508621 NCBI chr 2:195,738,613...195,821,608
Ensembl chr 2:195,738,619...195,821,608
JBrowse link
G Stmn2 stathmin 2 ISO
ISS
(PMID:21215777)
GO_REF:0000024
RGD
UniProt
PMID:21215777 GO_REF:0000024 NCBI chr 2:95,424,251...95,471,900
Ensembl chr 2:95,424,251...95,472,115
JBrowse link
G Tac1 tachykinin, precursor 1 ISO (MGI:MGI:5571523|PMID:24760869) RGD PMID:24760869 MGI:MGI:5571523 NCBI chr 4:33,638,853...33,646,819
Ensembl chr 4:33,638,709...33,646,819
JBrowse link
G Trpv1 transient receptor potential cation channel, subfamily V, member 1 IEP RGD PMID:21958434 RGD:8657122 NCBI chr10:59,799,123...59,824,208
Ensembl chr10:59,799,123...59,824,679
JBrowse link
G Usp8 ubiquitin specific peptidase 8 IDA RGD PMID:25662281 RGD:11053004 NCBI chr 3:119,173,818...119,222,499
Ensembl chr 3:119,173,818...119,222,484
JBrowse link
cellular response to brain-derived neurotrophic factor stimulus term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Crnkl1 crooked neck pre-mRNA splicing factor 1 IEP RGD PMID:12801913 RGD:634609 NCBI chr 6:18,349,226...18,351,540
Ensembl chr 6:18,349,167...18,351,536
JBrowse link
G Eef2 eukaryotic translation elongation factor 2 IEP RGD PMID:19625250 RGD:10401254 NCBI chr 7:11,401,501...11,406,771
Ensembl chr 7:11,401,501...11,406,771
JBrowse link
G Eef2k eukaryotic elongation factor-2 kinase IEP RGD PMID:19625250 RGD:10401254 NCBI chr 1:190,780,211...190,839,926
Ensembl chr 1:190,780,236...190,842,324
JBrowse link
G Eif4a3 eukaryotic translation initiation factor 4A3 IEP RGD PMID:17632064 RGD:10044262 NCBI chr10:108,415,201...108,425,195
Ensembl chr10:108,415,202...108,425,206
JBrowse link
G Irs1 insulin receptor substrate 1 IEP RGD PMID:17467122 RGD:10045898 NCBI chr 9:88,033,668...88,086,488
Ensembl chr 9:88,033,668...88,086,488
JBrowse link
G Nfkb1 nuclear factor kappa B subunit 1 IDA RGD PMID:11520908 RGD:10045822 NCBI chr 2:240,773,520...240,890,053
Ensembl chr 2:240,773,456...240,866,689
JBrowse link
G Ntrk2 neurotrophic receptor tyrosine kinase 2 IEP
IBA
PMID:21873635 RGD
GO_Central
PMID:21958434, PMID:21873635 RGD:8657122, RGD:13792537 NCBI chr17:5,934,651...6,245,778
Ensembl chr17:5,933,729...6,244,676
JBrowse link
G Pdpk1 3-phosphoinositide dependent protein kinase-1 IEP RGD PMID:18971483 RGD:10449508 NCBI chr10:13,446,373...13,525,248
Ensembl chr10:13,451,624...13,515,448
JBrowse link
G Sh3gl2 SH3 domain containing GRB2 like 2, endophilin A1 ISO
ISS
(MGI:MGI:5825424|PMID:21849472)
GO_REF:0000024
RGD
UniProt
PMID:21849472 GO_REF:0000024, MGI:MGI:5825424 NCBI chr 5:103,479,767...103,654,507
Ensembl chr 5:103,479,767...103,654,247
JBrowse link
G Tmem108 transmembrane protein 108 ISO
IEA
(MGI:MGI:5825407|PMID:27605705), (MGI:MGI:5825424|PMID:21849472)
GO_REF:0000107
RGD
Ensembl
PMID:21849472, PMID:27605705 GO_REF:0000107, MGI:MGI:5825407, MGI:MGI:5825424 NCBI chr 8:111,968,568...112,265,623
Ensembl chr 8:111,970,288...111,984,572
JBrowse link
G Ube3a ubiquitin protein ligase E3A IEP RGD PMID:25867122 RGD:11079590 NCBI chr 1:116,586,901...116,678,161
Ensembl chr 1:116,587,815...116,679,973
JBrowse link
G Wasf1 WASP family member 1 ISO
ISS
(MGI:MGI:5825407|PMID:27605705)
GO_REF:0000024
RGD
UniProt
PMID:27605705 GO_REF:0000024, MGI:MGI:5825407 NCBI chr20:48,456,191...48,503,768
Ensembl chr20:48,455,705...48,503,898
JBrowse link
nerve growth factor signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bdnf brain-derived neurotrophic factor IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:100,768,637...100,819,216
Ensembl chr 3:100,768,637...100,819,210
JBrowse link
G Coro1a coronin 1A ISO MGI:MGI:97321|MGI:MGI:97383 (MGI:MGI:5559799|PMID:24270184) RGD PMID:24270184 MGI:MGI:5559799 NCBI chr 1:198,123,883...198,128,890
Ensembl chr 1:198,123,884...198,128,857
JBrowse link
G Kidins220 kinase D-interacting substrate 220 IDA
IBA
PMID:17724123
PMID:21873635
UniProt
GO_Central
PMID:17724123, PMID:21873635 RGD:8554481, RGD:13792537 NCBI chr 6:44,225,142...44,322,938
Ensembl chr 6:44,225,233...44,322,938
JBrowse link
G Magi2 membrane associated guanylate kinase, WW and PDZ domain containing 2 IDA PMID:17724123 UniProt PMID:17724123 RGD:8554481 NCBI chr 4:10,995,241...12,472,423
Ensembl chr 4:10,995,234...11,610,518
JBrowse link
G Ngf nerve growth factor ISO
IBA
MGI:MGI:1345961|MGI:MGI:97383 (MGI:MGI:5559799|PMID:24270184), (MGI:MGI:69378|PMID:7854358)
PMID:21873635
RGD PMID:7854358, PMID:24270184, PMID:21873635 MGI:MGI:5559799, MGI:MGI:69378, RGD:13792537 NCBI chr 2:204,886,158...204,939,523
Ensembl chr 2:204,886,202...204,940,453
JBrowse link
G Ntf3 neurotrophin 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:158,636,883...158,705,886
Ensembl chr 4:158,636,884...158,705,886
JBrowse link
G Ntf4 neurotrophin 4 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:101,405,314...101,408,145
Ensembl chr 1:101,405,314...101,408,145
JBrowse link
G Ntrk1 neurotrophic receptor tyrosine kinase 1 IDA
IBA
ISO
PMID:17724123
PMID:21873635
MGI:MGI:1345961|MGI:MGI:97321 (MGI:MGI:5559799|PMID:24270184), (MGI:MGI:69378|PMID:7854358)
(PMID:1281417)
RGD PMID:1281417, PMID:7854358, PMID:24270184, PMID:17724123, PMID:21873635 MGI:MGI:5559799, MGI:MGI:69378, RGD:8554481, RGD:13792537 NCBI chr 2:187,143,568...187,160,373
Ensembl chr 2:187,143,568...187,160,373
JBrowse link
G Rap1a RAP1A, member of RAS oncogene family IDA PMID:17724123 UniProt PMID:17724123 RGD:8554481 NCBI chr 2:208,193,950...208,215,186
Ensembl chr 2:208,193,954...208,215,187
JBrowse link
G Rapgef1 Rap guanine nucleotide exchange factor 1 ISO (PMID:17724123) RGD PMID:17724123 NCBI chr 3:8,189,594...8,307,077
Ensembl chr 3:8,192,575...8,304,976
JBrowse link
G Rapgef2 Rap guanine nucleotide exchange factor 2 IDA PMID:17724123 UniProt PMID:17724123 RGD:8554481 NCBI chr 2:177,836,191...178,057,378
Ensembl chr 2:177,836,202...178,057,157
JBrowse link
G Sort1 sortilin 1 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 2:211,078,092...211,156,312
Ensembl chr 2:211,078,334...211,156,312
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20014
    response to stimulus 10568
      response to endogenous stimulus 2026
        response to nerve growth factor 83
          cellular response to nerve growth factor stimulus 79
            cellular response to brain-derived neurotrophic factor stimulus 12
            nerve growth factor signaling pathway 12
Path 2
Term Annotations click to browse term
  biological_process 20014
    response to stimulus 10568
      response to chemical 6330
        response to organic substance 3853
          response to growth factor 804
            cellular response to growth factor stimulus 765
              cellular response to nerve growth factor stimulus 79
                cellular response to brain-derived neurotrophic factor stimulus 12
                nerve growth factor signaling pathway 12
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.