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ONTOLOGY REPORT - ANNOTATIONS


Term:positive regulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress
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Accession:GO:1990440 term browser browse the term
Definition:Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of an endoplasmic reticulum stress.
Synonyms:exact_synonym: activation of transcription from RNA polymerase II promoter in response to ER stress;   stimulation of transcription from RNA polymerase II promoter in response to ER stress;   up-regulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress;   upregulation of Pol II transcription induced by ER stress;   upregulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress
 broad_synonym: ER stress-induced upregulation of transcription;   up-regulation of transcription induced by ER stress


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positive regulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf3 activating transcription factor 3 ISO (PMID:24939851) ParkinsonsUK-UCL PMID:24939851 NCBI chrNW_004955406:4,875,672...4,889,173
Ensembl chrNW_004955406:4,875,613...4,889,242
JBrowse link
G Atf4 activating transcription factor 4 ISO (PMID:21113145)
(MGI:MGI:5433837|PMID:21113145), (MGI:MGI:5613480|PMID:12871976)
(PMID:12871976)
ParkinsonsUK-UCL PMID:12871976, PMID:21113145 MGI:MGI:5433837, MGI:MGI:5613480 NCBI chrNW_004955413:25,406,589...25,408,727
Ensembl chrNW_004955413:25,406,589...25,412,218
JBrowse link
G Atf6 activating transcription factor 6 ISO (PMID:11163209), (PMID:11256944), (PMID:16469704) ParkinsonsUK-UCL PMID:11163209, PMID:11256944, PMID:16469704 NCBI chrNW_004955462:14,352,956...14,553,299
Ensembl chrNW_004955462:14,357,945...14,548,543
JBrowse link
G Atf6b activating transcription factor 6 beta ISO (PMID:11256944) ParkinsonsUK-UCL PMID:11256944 NCBI chrNW_004955437:582,083...592,026
Ensembl chrNW_004955437:582,431...591,810
JBrowse link
G Cebpb CCAAT enhancer binding protein beta ISO (PMID:15775988) ParkinsonsUK-UCL PMID:15775988 NCBI chrNW_004955445:8,060,432...8,061,289 JBrowse link
G Creb3l1 cAMP responsive element binding protein 3 like 1 ISO (MGI:MGI:5616321|PMID:15665855) ParkinsonsUK-UCL PMID:15665855 MGI:MGI:5616321, RGD:1558627 NCBI chrNW_004955422:1,702,131...1,734,603
Ensembl chrNW_004955422:1,700,692...1,734,773
JBrowse link
G Creb3l3 cAMP responsive element binding protein 3 like 3 ISO (PMID:16469704)
(MGI:MGI:5616319|PMID:16469704)
ParkinsonsUK-UCL PMID:16469704 MGI:MGI:5616319 NCBI chrNW_004955495:4,651,086...4,670,852
Ensembl chrNW_004955495:4,651,369...4,661,139
JBrowse link
G Ddit3 DNA damage inducible transcript 3 ISO (PMID:22761832)
(PMID:15775988)
(PMID:15322075), (PMID:24939851)
(MGI:MGI:3525819|PMID:15601821)
PMID:8657121
ParkinsonsUK-UCL PMID:8657121, PMID:15322075, PMID:15601821, PMID:15775988, PMID:22761832, PMID:24939851 MGI:MGI:3525819, RGD:1599740 NCBI chrNW_004955458:5,232,979...5,238,513
Ensembl chrNW_004955458:5,232,979...5,238,513
JBrowse link
G Eif2ak3 eukaryotic translation initiation factor 2 alpha kinase 3 ISO (MGI:MGI:3722921|PMID:14729979) ParkinsonsUK-UCL PMID:14729979 MGI:MGI:3722921 NCBI chrNW_004955424:210,867...279,267
Ensembl chrNW_004955424:226,038...280,593
JBrowse link
G Mbtps2 membrane bound transcription factor peptidase, site 2 ISO (PMID:11163209) ParkinsonsUK-UCL PMID:11163209 NCBI chrNW_004955509:2,185,054...2,222,497
Ensembl chrNW_004955509:2,184,522...2,222,505
JBrowse link
G Tp53 tumor protein p53 ISO (MGI:MGI:5621265|PMID:16407291) ParkinsonsUK-UCL PMID:16407291 MGI:MGI:5621265 NCBI chrNW_004955467:9,241,391...9,256,716
Ensembl chrNW_004955467:9,252,130...9,255,928
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 11892
    response to stimulus 6365
      response to stress 3034
        cellular response to stress 1637
          response to endoplasmic reticulum stress 222
            positive regulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress 11
Path 2
Term Annotations click to browse term
  biological_process 11892
    metabolic process 7610
      cellular metabolic process 7025
        cellular aromatic compound metabolic process 3735
          nucleobase-containing compound metabolic process 3563
            nucleic acid metabolic process 3276
              RNA metabolic process 2901
                RNA biosynthetic process 2351
                  regulation of RNA biosynthetic process 2272
                    regulation of nucleic acid-templated transcription 2267
                      regulation of transcription, DNA-templated 2259
                        positive regulation of transcription, DNA-templated 1387
                          positive regulation of transcription by RNA polymerase II 1115
                            positive regulation of transcription from RNA polymerase II promoter in response to stress 23
                              positive regulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress 11
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.