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ONTOLOGY REPORT - ANNOTATIONS


Term:positive regulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress
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Accession:GO:1990440 term browser browse the term
Definition:Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of an endoplasmic reticulum stress.
Synonyms:exact_synonym: activation of transcription from RNA polymerase II promoter in response to ER stress;   stimulation of transcription from RNA polymerase II promoter in response to ER stress;   up-regulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress;   upregulation of Pol II transcription induced by ER stress;   upregulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress
 broad_synonym: ER stress-induced upregulation of transcription;   up-regulation of transcription induced by ER stress


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positive regulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf3 activating transcription factor 3 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 1:191,170,296...191,183,333
Ensembl chr 1:191,170,296...191,218,039
JBrowse link
G Atf4 activating transcription factor 4 ISO
IMP
(MGI:MGI:5433837|PMID:21113145), (MGI:MGI:5613480|PMID:12871976) MGI
ParkinsonsUK-UCL
PMID:12871976, PMID:21113145 GO_REF:0000096, MGI:MGI:4834177, MGI:MGI:5433837, MGI:MGI:5613480 NCBI chr15:80,255,184...80,257,545
Ensembl chr15:80,255,184...80,257,541
JBrowse link
G Atf6 activating transcription factor 6 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 1:170,704,457...170,868,585
Ensembl chr 1:170,704,674...170,867,771
JBrowse link
G Atf6b activating transcription factor 6 beta ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr17:34,647,146...34,655,074
Ensembl chr17:34,647,146...34,655,074
JBrowse link
G Cebpb CCAAT/enhancer binding protein (C/EBP), beta ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 2:167,688,915...167,690,432
Ensembl chr 2:167,688,915...167,690,418
JBrowse link
G Creb3l1 cAMP responsive element binding protein 3-like 1 IDA
ISO
(MGI:MGI:5616321|PMID:15665855) ParkinsonsUK-UCL
RGD
PMID:15665855 GO_REF:0000096, MGI:MGI:4417868, MGI:MGI:5616321 NCBI chr 2:91,982,328...92,024,170
Ensembl chr 2:91,982,328...92,024,502
JBrowse link
G Creb3l3 cAMP responsive element binding protein 3-like 3 IMP
ISO
(MGI:MGI:5616319|PMID:16469704) ParkinsonsUK-UCL
MGI
PMID:16469704 GO_REF:0000096, MGI:MGI:4834177, MGI:MGI:5616319 NCBI chr10:81,084,329...81,098,872
Ensembl chr10:81,084,324...81,098,874
JBrowse link
G Ddit3 DNA-damage inducible transcript 3 NAS
IBA
ISO
IMP
(MGI:MGI:3525819|PMID:15601821)
(MGI:MGI:6201960|PMID:21873635)
ParkinsonsUK-UCL
GO_Central
MGI
RGD
PMID:15601821, PMID:21873635 GO_REF:0000096, MGI:MGI:3525819, MGI:MGI:4417868, MGI:MGI:4834177, MGI:MGI:6201960 NCBI chr10:127,290,793...127,296,291
Ensembl chr10:127,290,774...127,296,288
Ensembl chr10:127,290,774...127,296,288
JBrowse link
G Eif2ak3 eukaryotic translation initiation factor 2 alpha kinase 3 IMP (MGI:MGI:3722921|PMID:14729979) ParkinsonsUK-UCL PMID:14729979 MGI:MGI:3722921 NCBI chr 6:70,844,484...70,905,241
Ensembl chr 6:70,844,515...70,905,245
JBrowse link
G Mbtps2 membrane-bound transcription factor peptidase, site 2 ISO
IBA
(MGI:MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000096, MGI:MGI:4834177, MGI:MGI:6201960 NCBI chr  X:157,547,822...157,598,715
Ensembl chr  X:157,535,371...157,598,715
JBrowse link
G Trp53 transformation related protein 53 IMP (MGI:MGI:5621265|PMID:16407291) ParkinsonsUK-UCL PMID:16407291 MGI:MGI:5621265 NCBI chr11:69,580,348...69,591,873
Ensembl chr11:69,580,359...69,591,873
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 23386
    response to stimulus 10301
      response to stress 4153
        cellular response to stress 1968
          response to endoplasmic reticulum stress 265
            positive regulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress 11
Path 2
Term Annotations click to browse term
  biological_process 23386
    metabolic process 11301
      cellular metabolic process 10089
        cellular aromatic compound metabolic process 5437
          nucleobase-containing compound metabolic process 5205
            nucleic acid metabolic process 4765
              RNA metabolic process 4271
                RNA biosynthetic process 3374
                  regulation of RNA biosynthetic process 3271
                    regulation of nucleic acid-templated transcription 3266
                      regulation of transcription, DNA-templated 3251
                        positive regulation of transcription, DNA-templated 1560
                          positive regulation of transcription by RNA polymerase II 1257
                            positive regulation of transcription from RNA polymerase II promoter in response to stress 25
                              positive regulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress 11
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.