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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of stem cell population maintenance
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Accession:GO:2000036 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of stem cell population maintenance.
Synonyms:related_synonym: regulation of maintenance of pluripotency


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regulation of stem cell population maintenance term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cnot1 CCR4-NOT transcription complex, subunit 1 ISO (PMID:22367759)
(MGI:MGI:5487505|PMID:22367759)
RGD PMID:22367759 MGI:MGI:5487505 NCBI chr19:9,668,186...9,761,605
Ensembl chr19:9,668,186...9,761,605
JBrowse link
G Cnot2 CCR4-NOT transcription complex, subunit 2 ISO
IBA
(PMID:22367759)
PMID:21873635
(MGI:MGI:5487505|PMID:22367759)
RGD PMID:22367759, PMID:21873635 MGI:MGI:5487505, RGD:13792537 NCBI chr 7:59,526,105...59,617,307
Ensembl chr 7:59,527,124...59,587,385
JBrowse link
G Cnot3 CCR4-NOT transcription complex, subunit 3 ISO
IBA
(PMID:22367759)
PMID:21873635
(MGI:MGI:5487505|PMID:22367759)
RGD PMID:22367759, PMID:21873635 MGI:MGI:5487505, RGD:13792537 NCBI chr 1:64,130,823...64,147,066
Ensembl chr 1:64,130,908...64,147,251
JBrowse link
G Elavl1 ELAV like RNA binding protein 1 ISO (MGI:MGI:5559905|PMID:24394384) RGD PMID:24394384 MGI:MGI:5559905 NCBI chr12:2,461,502...2,502,432
Ensembl chr12:2,461,502...2,502,432
JBrowse link
G Hmga2 high mobility group AT-hook 2 ISO
ISS
(PMID:17624332)
GO_REF:0000024
RGD
UniProt
PMID:17624332 GO_REF:0000024 NCBI chr 7:65,159,944...65,275,408
Ensembl chr 7:65,159,944...65,275,408
JBrowse link
G Kat2a lysine acetyltransferase 2A ISO (MGI:MGI:6377803|PMID:30270482) RGD PMID:30270482 MGI:MGI:6377803 NCBI chr10:88,611,586...88,619,558
Ensembl chr10:88,611,586...88,619,537
JBrowse link
G Kdm3a lysine demethylase 3A ISO
IEA
MGI:MGI:1097166 (MGI:MGI:3759699|PMID:17938240)
GO_REF:0000107
RGD
Ensembl
PMID:17938240 GO_REF:0000107, MGI:MGI:3759699 NCBI chr 4:99,503,160...99,547,315
Ensembl chr 4:99,503,176...99,546,905
JBrowse link
G Ncoa3 nuclear receptor coactivator 3 ISO (MGI:MGI:5467164|PMID:22977234) RGD PMID:22977234 MGI:MGI:5467164 NCBI chr 3:162,692,176...162,788,582
Ensembl chr 3:162,692,185...162,787,548
JBrowse link
G Nfya nuclear transcription factor Y subunit alpha ISO (MGI:MGI:5474438|PMID:22969033) RGD PMID:22969033 MGI:MGI:5474438 NCBI chr 9:14,551,752...14,577,002
Ensembl chr 9:14,551,758...14,576,967
JBrowse link
G Ptn pleiotrophin ISS
ISO
GO_REF:0000024
(MGI:MGI:5293574|PMID:21791434)
UniProt
RGD
PMID:21791434 GO_REF:0000024, MGI:MGI:5293574 NCBI chr 4:64,239,156...64,330,996
Ensembl chr 4:64,239,158...64,330,996
JBrowse link
G Sav1 salvador family WW domain containing protein 1 ISO MGI:MGI:3790763 (MGI:MGI:3785211|PMID:18369314) RGD PMID:18369314 MGI:MGI:3785211 NCBI chr 6:92,376,470...92,398,678
Ensembl chr 6:92,376,093...92,398,525
JBrowse link
G Smo smoothened, frizzled class receptor ISO
IEA
MGI:MGI:1934268|MGI:MGI:2445832 (MGI:MGI:3696007|PMID:17199044)
GO_REF:0000107
RGD
Ensembl
PMID:17199044 GO_REF:0000107, MGI:MGI:3696007 NCBI chr 4:57,019,941...57,041,779
Ensembl chr 4:57,019,941...57,042,770
JBrowse link
G Tal1 TAL bHLH transcription factor 1, erythroid differentiation factor ISO MGI:MGI:1858004 (MGI:MGI:4421485|PMID:19850742) RGD PMID:19850742 MGI:MGI:4421485 NCBI chr 5:133,864,401...133,878,604
Ensembl chr 5:133,864,798...133,878,830
JBrowse link
G Tcf7l1 transcription factor 7 like 1 ISO (MGI:MGI:3777490|PMID:18347094), (MGI:MGI:3804326|PMID:18467660) RGD PMID:18347094, PMID:18467660 MGI:MGI:3777490, MGI:MGI:3804326 NCBI chr 4:100,492,796...100,660,401
Ensembl chr 4:100,491,798...100,660,140
JBrowse link
G Tcl1a Tcl1 family Akt coactivator A ISO MGI:MGI:2446210 (MGI:MGI:3759699|PMID:17938240) RGD PMID:17938240 MGI:MGI:3759699 NCBI chr 6:128,888,768...128,894,761
Ensembl chr 6:128,888,768...128,894,761
JBrowse link
G Wdr43 WD repeat domain 43 ISO (MGI:MGI:6323527|PMID:31128943) RGD PMID:31128943 MGI:MGI:6323527 NCBI chr 6:23,433,532...23,473,179
Ensembl chr 6:23,433,532...23,473,169
JBrowse link
G Zc3h13 zinc finger CCCH type containing 13 ISO (MGI:MGI:6158697|PMID:29547716) RGD PMID:29547716 MGI:MGI:6158697 NCBI chr15:57,340,522...57,405,287
Ensembl chr15:57,340,579...57,405,287
JBrowse link
negative regulation of mesenchymal cell apoptotic process involved in mesonephric nephron morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hnf1b HNF1 homeobox B ISO MGI:MGI:1857856 (MGI:MGI:4430439|PMID:20040500) RGD PMID:20040500 MGI:MGI:4430439 NCBI chr10:71,159,863...71,218,902
Ensembl chr10:71,159,869...71,218,902
JBrowse link
negative regulation of mesenchymal cell apoptotic process involved in metanephric nephron morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pax2 paired box 2 ISO
ISS
(MGI:MGI:3704067|PMID:17314325)
GO_REF:0000024
RGD
UniProt
PMID:17314325 GO_REF:0000024, MGI:MGI:3704067 NCBI chr 1:264,493,579...264,585,073
Ensembl chr 1:264,504,591...264,583,329
JBrowse link
G Pax8 paired box 8 ISO
ISS
(MGI:MGI:3704067|PMID:17314325)
GO_REF:0000024
RGD
UniProt
PMID:17314325 GO_REF:0000024, MGI:MGI:3704067 NCBI chr 3:1,527,316...1,586,019
Ensembl chr 3:1,527,279...1,584,946
JBrowse link
negative regulation of mesenchymal cell apoptotic process involved in nephron morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp7 bone morphogenetic protein 7 ISO MGI:MGI:1857654 (MGI:MGI:86404|PMID:9056639) RGD PMID:9056639 MGI:MGI:86404 NCBI chr 3:170,879,972...170,955,820
Ensembl chr 3:170,879,973...170,955,399
JBrowse link
negative regulation of stem cell population maintenance term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Loxl2 lysyl oxidase-like 2 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(MGI:MGI:6107312|PMID:25959397)
Ensembl
UniProt
RGD
PMID:25959397 GO_REF:0000024, GO_REF:0000107, MGI:MGI:6107312 NCBI chr15:51,276,022...51,365,238
Ensembl chr15:51,303,909...51,365,234
JBrowse link
G Wnt9b Wnt family member 9B ISO (PMID:25640183) RGD PMID:25640183 NCBI chr10:91,785,892...91,808,061
Ensembl chr10:91,785,893...91,807,937
JBrowse link
G Zfp706 zinc finger protein 706 ISO
IEA
(MGI:MGI:5640939|PMID:24412312)
GO_REF:0000107
RGD
Ensembl
PMID:24412312 GO_REF:0000107, MGI:MGI:5640939 NCBI chr 7:75,803,310...75,809,853
Ensembl chr 7:75,801,735...75,809,836
JBrowse link
positive regulation of somatic stem cell population maintenance term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lbh LBH regulator of WNT signaling pathway ISO (MGI:MGI:5634223|PMID:25655704) RGD PMID:25655704 MGI:MGI:5634223 NCBI chr 6:24,154,207...24,184,217
Ensembl chr 6:24,160,226...24,181,866
JBrowse link
G Tp63 tumor protein p63 ISO (MGI:MGI:5634223|PMID:25655704) RGD PMID:25655704 MGI:MGI:5634223 NCBI chr11:78,234,853...78,456,559
Ensembl chr11:78,234,800...78,456,501
JBrowse link
positive regulation of stem cell population maintenance term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Esrrb estrogen-related receptor beta ISS
ISO
GO_REF:0000024
(MGI:MGI:5440110|PMID:23019124), (MGI:MGI:5468900|PMID:23040478), (MGI:MGI:5882870|PMID:23040477), (MGI:MGI:5887187|PMID:26206133)
UniProt
RGD
PMID:23019124, PMID:23040477, PMID:23040478, PMID:26206133 GO_REF:0000024, MGI:MGI:5440110, MGI:MGI:5468900, MGI:MGI:5882870, MGI:MGI:5887187 NCBI chr 6:110,360,940...110,458,406
Ensembl chr 6:110,410,141...110,455,906
JBrowse link
G Kdm2b lysine demethylase 2B ISO (MGI:MGI:5433809|PMID:21540074) RGD PMID:21540074 MGI:MGI:5433809 NCBI chr12:39,021,924...39,161,954
Ensembl chr12:39,078,119...39,161,956
JBrowse link
G Ncoa3 nuclear receptor coactivator 3 ISO
ISS
(MGI:MGI:5440110|PMID:23019124)
GO_REF:0000024
RGD
UniProt
PMID:23019124 GO_REF:0000024, MGI:MGI:5440110 NCBI chr 3:162,692,176...162,788,582
Ensembl chr 3:162,692,185...162,787,548
JBrowse link
G Prdm14 PR/SET domain 14 ISO (MGI:MGI:5787734|PMID:26523391), (MGI:MGI:5788595|PMID:27281218) RGD PMID:26523391, PMID:27281218 MGI:MGI:5787734, MGI:MGI:5788595 NCBI chr 5:5,710,076...5,730,560
Ensembl chr 5:5,710,392...5,730,560
JBrowse link
G Rest RE1-silencing transcription factor ISS
ISO
GO_REF:0000024
(PMID:21258371)
UniProt
RGD
PMID:21258371 GO_REF:0000024 NCBI chr14:33,131,985...33,152,019
Ensembl chr14:33,134,511...33,164,141
JBrowse link
G Tead1 TEA domain transcription factor 1 ISO MGI:MGI:106907|MGI:MGI:109241 (MGI:MGI:4455217|PMID:20516196) RGD PMID:20516196 MGI:MGI:4455217 NCBI chr 1:177,495,500...177,714,795
Ensembl chr 1:177,495,782...177,707,061
JBrowse link
G Tead3 TEA domain transcription factor 3 ISO MGI:MGI:101876|MGI:MGI:106907 (MGI:MGI:4455217|PMID:20516196) RGD PMID:20516196 MGI:MGI:4455217 NCBI chr20:7,911,562...7,930,949
Ensembl chr20:7,908,226...7,930,929
JBrowse link
G Tead4 TEA domain transcription factor 4 ISO MGI:MGI:101876|MGI:MGI:109241 (MGI:MGI:4455217|PMID:20516196) RGD PMID:20516196 MGI:MGI:4455217 NCBI chr 4:161,542,566...161,619,848
Ensembl chr 4:161,540,130...161,587,222
JBrowse link
G Yap1 Yes1 associated transcriptional regulator ISO (MGI:MGI:4455217|PMID:20516196) RGD PMID:20516196 MGI:MGI:4455217 NCBI chr 8:6,133,014...6,204,240
Ensembl chr 8:6,135,493...6,203,579
JBrowse link
G Zfp322a zinc finger protein 322a ISO (MGI:MGI:6114965|PMID:24550733) RGD PMID:24550733 MGI:MGI:6114965 NCBI chr17:44,025,036...44,040,900
Ensembl chr17:44,025,267...44,039,284
JBrowse link
regulation of somatic stem cell population maintenance term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Myc MYC proto-oncogene, bHLH transcription factor ISS
ISO
GO_REF:0000024
(MGI:MGI:6323493|PMID:31005419)
UniProt
RGD
PMID:31005419 GO_REF:0000024, MGI:MGI:6323493 NCBI chr 7:102,586,313...102,591,240
Ensembl chr 7:102,586,313...102,591,240
JBrowse link
G Taf5l TATA-box binding protein associated factor 5 like ISO (MGI:MGI:6323493|PMID:31005419) RGD PMID:31005419 MGI:MGI:6323493 NCBI chr19:56,781,854...56,801,005
Ensembl chr19:56,781,859...56,799,445
JBrowse link
G Taf6l TATA-box binding protein associated factor 6 like ISO (MGI:MGI:6323493|PMID:31005419) RGD PMID:31005419 MGI:MGI:6323493 NCBI chr 1:224,974,238...224,986,819
Ensembl chr 1:224,974,208...224,986,291
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20014
    multicellular organismal process 9055
      stem cell population maintenance 165
        regulation of stem cell population maintenance 38
          negative regulation of stem cell population maintenance + 7
          positive regulation of stem cell population maintenance + 12
          regulation of somatic stem cell population maintenance + 9
Path 2
Term Annotations click to browse term
  biological_process 20014
    biological regulation 13759
      regulation of biological process 13071
        regulation of multicellular organismal process 3453
          regulation of stem cell population maintenance 38
            negative regulation of stem cell population maintenance + 7
            positive regulation of stem cell population maintenance + 12
            regulation of somatic stem cell population maintenance + 9
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.