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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of ubiquitin-dependent protein catabolic process
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Accession:GO:2000058 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of ubiquitin-dependent protein catabolic process.
Synonyms:exact_synonym: regulation of protein ubiquitination during ubiquitin-dependent protein breakdown;   regulation of protein ubiquitination during ubiquitin-dependent protein catabolism;   regulation of protein ubiquitination during ubiquitin-dependent protein degradation;   regulation of protein ubiquitinylation during ubiquitin-dependent protein catabolic process;   regulation of protein ubiquitinylation during ubiquitin-dependent protein catabolism;   regulation of protein ubiquitylation during ubiquitin-dependent protein catabolic process;   regulation of protein ubiquitylation during ubiquitin-dependent protein catabolism
 narrow_synonym: regulation of protein ubiquitination involved in ubiquitin-dependent protein catabolic process
 related_synonym: regulation of myofibrillar protein ubiquitination during ubiquitin-dependent protein breakdown;   regulation of myofibrillar protein ubiquitination during ubiquitin-dependent protein catabolic process;   regulation of myofibrillar protein ubiquitination during ubiquitin-dependent protein catabolism;   regulation of myofibrillar protein ubiquitination during ubiquitin-dependent protein degradation;   regulation of protein degradation tagging activity;   regulation of protein ubiquitination during ubiquitin-dependent protein catabolic process


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regulation of ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lats1 large tumor suppressor kinase 1 ISO (PMID:28068668) RGD PMID:28068668 NCBI chr 1:1,784,078...1,817,310
Ensembl chr 1:1,784,078...1,817,310
JBrowse link
G Nub1 negative regulator of ubiquitin-like proteins 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:6,950,870...6,981,400
Ensembl chr 4:6,951,478...6,978,073
JBrowse link
G Ptk2b protein tyrosine kinase 2 beta ISO (PMID:19880522) RGD PMID:19880522 NCBI chr15:42,827,306...42,947,796
Ensembl chr15:42,827,310...42,947,656
JBrowse link
G Ube3a ubiquitin protein ligase E3A ISO (PMID:24728990) RGD PMID:24728990 NCBI chr 1:116,586,901...116,678,161
Ensembl chr 1:116,587,815...116,679,973
JBrowse link
negative regulation of ER-associated ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sgta small glutamine rich tetratricopeptide repeat containing alpha ISO
ISS
(PMID:23129660)
GO_REF:0000024
RGD
UniProt
PMID:23129660 GO_REF:0000024 NCBI chr 7:11,521,949...11,538,691
Ensembl chr 7:11,521,998...11,539,319
JBrowse link
G Svip small VCP interacting protein IC
IBA
ISO
PMID:17000876
PMID:21873635
(PMID:17872946)
RGD PMID:17872946, PMID:17000876, PMID:21873635 RGD:10047192, RGD:13792537 NCBI chr 1:107,368,117...107,373,807
Ensembl chr 1:107,368,117...107,373,807
JBrowse link
G Usp14 ubiquitin specific peptidase 14 ISO (PMID:19135427) RGD PMID:19135427 NCBI chr18:1,178,785...1,216,573
Ensembl chr18:1,178,787...1,216,409
JBrowse link
negative regulation of proteasomal ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bag5 BAG cochaperone 5 ISO (PMID:24475098) RGD PMID:24475098 NCBI chr 6:136,180,640...136,185,651
Ensembl chr 6:136,182,006...136,185,651
JBrowse link
G Bag6 BAG cochaperone 6 ISS
ISO
GO_REF:0000024
(MGI:3808636|PMID:18678708)
UniProt
RGD
PMID:18678708 GO_REF:0000024, MGI:3808636 NCBI chr20:5,124,512...5,138,084
Ensembl chr20:5,125,349...5,138,084
JBrowse link
G Camlg calcium modulating ligand ISO UniProtKB:Q9H9V4 (PMID:20553626) RGD PMID:20553626 NCBI chr17:9,523,792...9,534,683
Ensembl chr17:9,523,795...9,534,653
JBrowse link
G Ccar2 cell cycle and apoptosis regulator 2 ISO (PMID:23398316) RGD PMID:23398316 NCBI chr15:51,818,887...51,834,443
Ensembl chr15:51,818,897...51,834,030
JBrowse link
G Clec16a C-type lectin domain containing 16A ISO MGI:5648633 (MGI:5603233|PMID:24949970) RGD PMID:24949970 MGI:5603233 NCBI chr10:5,002,196...5,196,914
Ensembl chr10:5,009,826...5,196,892
JBrowse link
G Ddrgk1 DDRGK domain containing 1 ISO (PMID:28263186) RGD PMID:28263186 NCBI chr 3:123,195,580...123,206,828
Ensembl chr 3:123,195,580...123,206,828
JBrowse link
G Eif3h eukaryotic translation initiation factor 3, subunit H ISO (PMID:32269044) RGD PMID:32269044 NCBI chr 6:10,151,732...10,236,677 JBrowse link
G Fhit fragile histidine triad diadenosine triphosphatase ISO
IBA
ISS
(PMID:15313915)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:15313915, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr15:15,697,292...16,862,873 JBrowse link
G Gipc1 GIPC PDZ domain containing family, member 1 ISO (MGI:3807767|PMID:11546783) RGD PMID:11546783 MGI:3807767 NCBI chr19:24,786,604...24,798,231
Ensembl chr19:24,786,628...24,798,233
JBrowse link
G Hsp90ab1 heat shock protein 90 alpha family class B member 1 ISS
ISO
GO_REF:0000024
(PMID:16280321), (PMID:24613385)
UniProt
RGD
PMID:16280321, PMID:24613385 GO_REF:0000024 NCBI chr 9:17,817,791...17,823,163
Ensembl chr 9:17,817,721...17,823,243
JBrowse link
G Klhl40 kelch-like family member 40 IBA
ISO
PMID:21873635
(MGI:5586592|PMID:24960163)
RGD PMID:24960163, PMID:21873635 MGI:5586592, RGD:13792537 NCBI chr 8:130,416,265...130,421,871
Ensembl chr 8:130,416,355...130,421,871
JBrowse link
G Map1a microtubule-associated protein 1A ISO (MGI:5703671|PMID:26609151) RGD PMID:26609151 MGI:5703671 NCBI chr 3:113,251,918...113,272,193
Ensembl chr 3:113,251,778...113,272,186
JBrowse link
G Mtm1 myotubularin 1 ISO MGI:2450997 (MGI:5510937|PMID:23695157) RGD PMID:23695157 MGI:5510937 NCBI chr 6:18,821,821...18,840,449
Ensembl chr 6:18,821,815...18,839,409
JBrowse link
G N4bp1 Nedd4 binding protein 1 IBA
ISO
PMID:21873635
(MGI:3829128|PMID:17592138)
RGD PMID:17592138, PMID:21873635 MGI:3829128, RGD:13792537 NCBI chr19:21,218,123...21,268,539
Ensembl chr19:21,218,465...21,266,964
JBrowse link
G Nop53 NOP53 ribosome biogenesis factor ISO (PMID:22522597) RGD PMID:22522597 NCBI chr 1:77,836,522...77,843,991
Ensembl chr 1:77,836,196...77,844,189
JBrowse link
G Ogt O-linked N-acetylglucosamine (GlcNAc) transferase IEA
ISO
GO_REF:0000107
(PMID:26678539)
Ensembl
RGD
PMID:26678539 GO_REF:0000107 NCBI chr  X:71,540,870...71,585,906
Ensembl chr  X:71,528,988...71,585,908
JBrowse link
G Park7 Parkinsonism associated deglycase ISO
IEA
(PMID:17015834)
GO_REF:0000107
RGD
Ensembl
PMID:17015834 GO_REF:0000107 NCBI chr 5:167,982,438...168,004,724
Ensembl chr 5:167,982,439...168,004,724
JBrowse link
G Pbk PDZ binding kinase ISO MGI:5293435 (MGI:5293269|PMID:21715333) RGD PMID:21715333 MGI:5293269 NCBI chr15:42,489,253...42,500,377
Ensembl chr15:42,489,377...42,500,395
JBrowse link
G Rpl11 ribosomal protein L11 ISS
ISO
GO_REF:0000024
(MGI:5897550|PMID:21804542)
UniProt
RGD
PMID:21804542 GO_REF:0000024, MGI:5897550 NCBI chr 5:154,390,809...154,394,412
Ensembl chr 5:154,388,140...154,394,328
JBrowse link
G Rybp RING1 and YY1 binding protein ISO (PMID:27060496) RGD PMID:27060496 NCBI chr 4:132,689,623...132,740,823
Ensembl chr 4:132,689,531...132,740,938
JBrowse link
G Sdcbp syndecan binding protein ISO
ISS
(PMID:25893292)
GO_REF:0000024
RGD
UniProt
PMID:25893292 GO_REF:0000024 NCBI chr 5:19,471,664...19,498,499
Ensembl chr 5:19,471,664...19,498,485
JBrowse link
G Senp1 SUMO specific peptidase 1 ISO MGI:3818522 (MGI:3818351|PMID:17981124) RGD PMID:17981124 MGI:3818351 NCBI chr 7:139,626,444...139,684,587
Ensembl chr 7:139,630,515...139,675,245
JBrowse link
G Shh sonic hedgehog signaling molecule IEA
ISO
GO_REF:0000107
(MGI:3624046|PMID:16611981)
Ensembl
RGD
PMID:16611981 GO_REF:0000107, MGI:3624046 NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691
JBrowse link
G Smarcc1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 ISO (MGI:5310666|PMID:22285184) RGD PMID:22285184 MGI:5310666 NCBI chr 8:118,206,678...118,326,264
Ensembl chr 8:118,206,698...118,325,537
JBrowse link
G Taf9 TATA-box binding protein associated factor 9 ISO (PMID:11278372) RGD PMID:11278372 NCBI chr 2:30,664,407...30,668,414
Ensembl chr 2:30,664,639...30,668,414
JBrowse link
G Tlk2 tousled-like kinase 2 ISO (PMID:20016786) RGD PMID:20016786 NCBI chr10:93,410,181...93,507,277
Ensembl chr10:93,415,399...93,507,277
JBrowse link
G Trim39 tripartite motif-containing 39 ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(PMID:23213251)
UniProt
RGD
PMID:23213251, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr20:2,500,691...2,514,546
Ensembl chr20:2,500,689...2,514,546
JBrowse link
G Ttc36 tetratricopeptide repeat domain 36 ISO MGI:5588394 (MGI:6362140|PMID:31537781) RGD PMID:31537781 MGI:6362140 NCBI chr 8:49,106,374...49,109,981
Ensembl chr 8:49,106,374...49,109,981
JBrowse link
G Ubxn1 UBX domain protein 1 ISO
ISS
(PMID:20351172)
GO_REF:0000024
RGD
UniProt
PMID:20351172 GO_REF:0000024 NCBI chr 1:225,067,953...225,071,944
Ensembl chr 1:225,068,009...225,071,945
JBrowse link
G Uchl5 ubiquitin C-terminal hydrolase L5 ISO (PMID:23770237) RGD PMID:23770237 NCBI chr13:60,568,102...60,603,812
Ensembl chr13:60,545,635...60,603,811
JBrowse link
G Usp7 ubiquitin specific peptidase 7 IEA
ISO
GO_REF:0000107
(PMID:26678539)
Ensembl
RGD
PMID:26678539 GO_REF:0000107 NCBI chr10:6,930,462...7,019,910
Ensembl chr10:6,975,244...7,018,930
JBrowse link
G Wac WW domain containing adaptor with coiled-coil ISO (PMID:22354037) RGD PMID:22354037 NCBI chr17:60,887,606...60,946,630
Ensembl chr17:60,888,017...60,946,426
JBrowse link
negative regulation of SCF-dependent proteasomal ubiquitin-dependent catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Styx serine/threonine/tyrosine interacting protein ISO
IBA
(PMID:28007894)
PMID:21873635
RGD PMID:28007894, PMID:21873635 RGD:13792537 NCBI chr15:19,690,079...19,720,683
Ensembl chr15:19,690,194...19,717,774
JBrowse link
negative regulation of ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anks1a ankyrin repeat and sterile alpha motif domain containing 1A ISO (MGI:4461099|PMID:20100865) RGD PMID:20100865 MGI:4461099 NCBI chr20:7,484,550...7,636,498
Ensembl chr20:7,484,550...7,636,497
JBrowse link
G Cdkn2a cyclin-dependent kinase inhibitor 2A ISO (PMID:16173922), (PMID:18560357)
(MGI:5468878|PMID:23277542)
RGD PMID:16173922, PMID:18560357, PMID:23277542 MGI:5468878 NCBI chr 5:107,823,323...107,832,405
Ensembl chr 5:107,823,330...107,841,175
JBrowse link
G Csnk2a1 casein kinase 2 alpha 1 ISO UniProtKB:P19784|UniProtKB:P25686|UniProtKB:P67870 (PMID:28031292) RGD PMID:28031292 NCBI chr 3:147,713,808...147,760,375
Ensembl chr 3:147,713,821...147,757,862
JBrowse link
G Csnk2a2 casein kinase 2 alpha 2 ISO UniProtKB:P25686|UniProtKB:P67870|UniProtKB:P68400 (PMID:28031292) RGD PMID:28031292 NCBI chr19:9,972,537...10,012,043
Ensembl chr19:9,972,537...10,012,043
JBrowse link
G Hfe homeostatic iron regulator ISO (PMID:24904118) RGD PMID:24904118 NCBI chr17:43,661,276...43,669,327
Ensembl chr17:43,661,222...43,669,985
JBrowse link
G Hipk2 homeodomain interacting protein kinase 2 ISO (PMID:21628596) RGD PMID:21628596 NCBI chr 4:66,438,390...66,625,183
Ensembl chr 4:66,445,266...66,624,912
JBrowse link
G Pdcl3 phosducin-like 3 ISO (PMID:23792958) RGD PMID:23792958 NCBI chr 9:45,672,257...45,680,728
Ensembl chr 9:45,672,157...45,680,799
JBrowse link
G Pml PML nuclear body scaffold ISO (PMID:15195100) RGD PMID:15195100 NCBI chr 8:63,002,515...63,034,310
Ensembl chr 8:63,004,870...63,034,226
JBrowse link
G Psen1 presenilin 1 ISO (MGI:4887523|PMID:20208556) RGD PMID:20208556 MGI:4887523 NCBI chr 6:107,169,514...107,221,000
Ensembl chr 6:107,169,528...107,216,798
JBrowse link
G Psen2 presenilin 2 ISO (MGI:4887523|PMID:20208556) RGD PMID:20208556 MGI:4887523 NCBI chr13:98,513,600...98,539,347
Ensembl chr13:98,513,570...98,530,724
JBrowse link
G Qrich2 glutamine rich 2 ISO (PMID:30683861)
(MGI:6277293|PMID:30683861)
RGD PMID:30683861 MGI:6277293 NCBI chr10:105,397,470...105,422,811
Ensembl chr10:105,399,814...105,412,627
JBrowse link
G Rpl11 ribosomal protein L11 ISO (PMID:18560357) RGD PMID:18560357 NCBI chr 5:154,390,809...154,394,412
Ensembl chr 5:154,388,140...154,394,328
JBrowse link
G Rpl23 ribosomal protein L23 ISO (PMID:15314173) RGD PMID:15314173 NCBI chr10:85,721,398...85,725,359
Ensembl chr10:85,721,394...85,725,429
JBrowse link
G Rpl5 ribosomal protein L5 ISO (PMID:18560357) RGD PMID:18560357 NCBI chr14:2,860,963...2,867,397
Ensembl chr14:2,860,965...2,867,397
JBrowse link
G Rps7 ribosomal protein S7 ISO (PMID:17310983) RGD PMID:17310983 NCBI chr 6:47,899,525...47,904,389
Ensembl chr 6:47,899,525...47,904,437
JBrowse link
G Sgta small glutamine rich tetratricopeptide repeat containing alpha ISO
ISS
(PMID:23129660)
GO_REF:0000024
RGD
UniProt
PMID:23129660 GO_REF:0000024 NCBI chr 7:11,521,949...11,538,691
Ensembl chr 7:11,521,998...11,539,319
JBrowse link
G Sufu SUFU negative regulator of hedgehog signaling ISO MGI:1343085 (MGI:4355593|PMID:19684112) RGD PMID:19684112 MGI:4355593 NCBI chr 1:266,143,766...266,241,742
Ensembl chr 1:266,143,818...266,239,016
JBrowse link
G Taf1 TATA-box binding protein associated factor 1 ISO (PMID:17237821) RGD PMID:17237821 NCBI chr  X:71,412,291...71,486,456
Ensembl chr  X:71,412,289...71,485,085
JBrowse link
G Trim39 tripartite motif-containing 39 ISO (PMID:19100260) RGD PMID:19100260 NCBI chr20:2,500,691...2,514,546
Ensembl chr20:2,500,689...2,514,546
JBrowse link
G Wnt1 Wnt family member 1 ISO (MGI:3628833|PMID:16601693) RGD PMID:16601693 MGI:3628833 NCBI chr 7:140,464,999...140,469,046
Ensembl chr 7:140,464,999...140,469,046
JBrowse link
positive regulation of anaphase-promoting complex-dependent catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdc20 cell division cycle 20 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:137,260,728...137,264,931
Ensembl chr 5:137,260,739...137,265,015
JBrowse link
G Fzr1 fizzy and cell division cycle 20 related 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:11,201,690...11,213,614
Ensembl chr 7:11,201,690...11,213,613
JBrowse link
positive regulation of ER-associated ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcap31 B-cell receptor-associated protein 31 ISO UniProtKB:Q9BUN8 (PMID:18555783) RGD PMID:18555783 NCBI chr  X:157,094,365...157,126,397
Ensembl chr  X:157,095,937...157,126,393
JBrowse link
G Cav1 caveolin 1 IEA
ISO
GO_REF:0000107
(PMID:24089527)
Ensembl
RGD
PMID:24089527 GO_REF:0000107 NCBI chr 4:44,597,123...44,630,206
Ensembl chr 4:44,597,123...44,630,200
JBrowse link
G Herpud1 homocysteine inducible ER protein with ubiquitin like domain 1 ISS
ISO
PMID:22045699
(PMID:18307982), (PMID:22045699)
RGD PMID:18307982, PMID:22045699, PMID:22045699 RGD:10047316 NCBI chr19:11,046,905...11,057,440
Ensembl chr19:11,046,909...11,057,254
JBrowse link
G Sgta small glutamine rich tetratricopeptide repeat containing alpha ISO (PMID:23246001) RGD PMID:23246001 NCBI chr 7:11,521,949...11,538,691
Ensembl chr 7:11,521,998...11,539,319
JBrowse link
G Ubqln1 ubiquilin 1 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:18307982)
Ensembl
UniProt
RGD
PMID:18307982 GO_REF:0000024, GO_REF:0000107 NCBI chr17:6,840,441...6,878,842
Ensembl chr17:6,840,463...6,878,844
JBrowse link
G Ubqln2 ubiquilin 2 ISO (PMID:18307982) RGD PMID:18307982 NCBI chr  X:18,723,313...18,726,732
Ensembl chr  X:18,723,341...18,726,732
JBrowse link
positive regulation of proteasomal ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akt1 AKT serine/threonine kinase 1 ISO (MGI:3589701|PMID:15937334) RGD PMID:15937334 MGI:3589701 NCBI chr 6:137,218,398...137,239,970
Ensembl chr 6:137,218,376...137,236,258
JBrowse link
G Ankib1 ankyrin repeat and IBR domain containing 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:27,473,477...27,597,206
Ensembl chr 4:27,473,477...27,597,206
JBrowse link
G Arih1 ariadne RBR E3 ubiquitin protein ligase 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:64,166,359...64,268,555
Ensembl chr 8:64,166,360...64,268,555
JBrowse link
G Arih2 ariadne RBR E3 ubiquitin protein ligase 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:117,387,004...117,446,085
Ensembl chr 8:117,387,010...117,446,019
JBrowse link
G Atg7 autophagy related 7 ISO MGI:2446434|MGI:3587769|MGI:3691571 (MGI:5465208|PMID:23152632) RGD PMID:23152632 MGI:5465208 NCBI chr 4:146,570,113...146,777,093
Ensembl chr 4:146,598,413...146,777,124
JBrowse link
G Aurka aurora kinase A IEA
ISO
GO_REF:0000107
(MGI:3697244|PMID:17060449)
Ensembl
RGD
PMID:17060449 GO_REF:0000107, MGI:3697244 NCBI chr 3:170,364,177...170,380,278
Ensembl chr 3:170,364,181...170,378,210
JBrowse link
G Axin1 axin 1 ISO (MGI:3628833|PMID:16601693) RGD PMID:16601693 MGI:3628833
G Bag2 BAG cochaperone 2 NOT ISO UniProtKB:P10636 (MGI:6148635|PMID:19228967) RGD PMID:19228967 MGI:6148635 NCBI chr 9:38,456,487...38,467,120
Ensembl chr 9:38,456,468...38,467,118
JBrowse link
G Bbs7 Bardet-Biedl syndrome 7 ISO UniProtKB:Q99496 (PMID:22302990) RGD PMID:22302990 NCBI chr 2:123,283,402...123,322,991
Ensembl chr 2:123,283,388...123,323,170
JBrowse link
G Cbfa2t3 CBFA2/RUNX1 partner transcriptional co-repressor 3 ISO (PMID:25974097) RGD PMID:25974097 NCBI chr19:55,438,409...55,510,652
Ensembl chr19:55,441,572...55,510,460
JBrowse link
G Chfr checkpoint with forkhead and ring finger domains ISO (MGI:5310666|PMID:22285184) RGD PMID:22285184 MGI:5310666 NCBI chr12:52,562,594...52,596,162
Ensembl chr12:52,562,597...52,596,076
JBrowse link
G Clu clusterin IEA
IBA
ISS
ISO
GO_REF:0000107
PMID:21873635
GO_REF:0000024
(PMID:20068069)
Ensembl
UniProt
RGD
PMID:20068069, PMID:21873635 GO_REF:0000024, GO_REF:0000107, RGD:13792537 NCBI chr15:42,626,612...42,665,858
Ensembl chr15:42,640,146...42,665,857
JBrowse link
G Cop1 COP1, E3 ubiquitin ligase ISO (PMID:19805145) RGD PMID:19805145 NCBI chr13:76,942,883...77,076,015
Ensembl chr13:76,942,928...77,075,723
JBrowse link
G Csnk1a1 casein kinase 1, alpha 1 IEA
ISO
GO_REF:0000107
(PMID:11955436), (PMID:19364825)
Ensembl
RGD
PMID:11955436, PMID:19364825 GO_REF:0000107 NCBI chr18:56,887,722...56,910,610
Ensembl chr18:56,887,354...56,918,345
JBrowse link
G Csnk1d casein kinase 1, delta ISS
ISO
IBA
GO_REF:0000024
(MGI:3849793|PMID:19414593)
PMID:21873635
UniProt
RGD
PMID:19414593, PMID:21873635 GO_REF:0000024, MGI:3849793, RGD:13792537 NCBI chr10:110,147,786...110,182,413
Ensembl chr10:110,148,600...110,182,408
JBrowse link
G Csnk1e casein kinase 1, epsilon IBA
ISO
PMID:21873635
(MGI:3849793|PMID:19414593)
RGD PMID:19414593, PMID:21873635 MGI:3849793, RGD:13792537 NCBI chr 7:120,651,976...120,675,559
Ensembl chr 7:120,651,881...120,672,359
JBrowse link
G Dab2 DAB adaptor protein 2 IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 2:55,747,353...55,768,848
Ensembl chr 2:55,747,318...55,768,270
JBrowse link
G Dda1 DET1 and DDB1 associated 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:19,877,873...19,885,501
Ensembl chr16:19,881,122...19,885,500
JBrowse link
G Ddrgk1 DDRGK domain containing 1 ISO (PMID:23675531) RGD PMID:23675531 NCBI chr 3:123,195,580...123,206,828
Ensembl chr 3:123,195,580...123,206,828
JBrowse link
G Det1 DET1 partner of COP1 E3 ubiquitin ligase ISO UniProtKB:Q8NHY2 (PMID:14739464) RGD PMID:14739464 NCBI chr 1:140,519,755...140,535,969
Ensembl chr 1:140,519,702...140,535,934
JBrowse link
G Dnajb2 DnaJ heat shock protein family (Hsp40) member B2 ISO
IBA
(PMID:15936278)
PMID:21873635
RGD PMID:15936278, PMID:21873635 RGD:13792537 NCBI chr 9:82,436,453...82,444,669
Ensembl chr 9:82,436,458...82,444,668
JBrowse link
G Dvl1 dishevelled segment polarity protein 1 ISO (PMID:20177058) RGD PMID:20177058 NCBI chr 5:173,295,948...173,308,014
Ensembl chr 5:173,296,270...173,307,945
JBrowse link
G Fbxo22 F-box protein 22 IBA
ISO
PMID:21873635
(MGI:3840749|PMID:19319192)
RGD PMID:19319192, PMID:21873635 MGI:3840749, RGD:13792537 NCBI chr 8:59,770,032...59,786,061
Ensembl chr 8:59,769,994...59,786,065
JBrowse link
G Gba glucosylceramidase beta ISO (MGI:5501380|PMID:23707074) RGD PMID:23707074 MGI:5501380 NCBI chr 2:188,511,781...188,522,602
Ensembl chr 2:188,516,582...188,522,601
JBrowse link
G Gclc glutamate-cysteine ligase, catalytic subunit ISO MGI:2387010 (MGI:3695876|PMID:17189825) RGD PMID:17189825 MGI:3695876 NCBI chr 8:85,059,051...85,097,471
Ensembl chr 8:85,059,051...85,097,468
JBrowse link
G Gsk3a glycogen synthase kinase 3 alpha ISO (PMID:25897075) RGD PMID:25897075 NCBI chr 1:82,097,244...82,108,238
Ensembl chr 1:82,097,247...82,108,203
JBrowse link
G Gsk3b glycogen synthase kinase 3 beta IEA
ISO
GO_REF:0000107
MGI:1924375|MGI:3039600 (MGI:5437589|PMID:22660580)
(PMID:19364825), (PMID:25897075)
Ensembl
RGD
PMID:19364825, PMID:22660580, PMID:25897075 GO_REF:0000107, MGI:5437589 NCBI chr11:65,060,884...65,208,842
Ensembl chr11:65,066,235...65,209,268
JBrowse link
G Hspa1a heat shock protein family A (Hsp70) member 1A ISO
IBA
(PMID:24613385)
PMID:21873635
RGD PMID:24613385, PMID:21873635 RGD:13792537 NCBI chr20:4,875,834...4,881,751
Ensembl chr20:4,877,324...4,879,779
JBrowse link
G Hspa1b heat shock protein family A (Hsp70) member 1B ISO
IBA
(PMID:24613385)
PMID:21873635
RGD PMID:24613385, PMID:21873635 RGD:13792537 NCBI chr20:4,877,638...4,880,112
Ensembl chr20:2,699,712...2,701,815
JBrowse link
G Hspbp1 HSPA (Hsp70) binding protein 1 ISO (PMID:16831871) RGD PMID:16831871 NCBI chr 1:72,732,418...72,756,087
Ensembl chr 1:72,732,668...72,756,082
JBrowse link
G Il33 interleukin 33 IEA
ISO
GO_REF:0000107
MGI:1861437|MGI:3039600 (MGI:5437589|PMID:22660580)
Ensembl
RGD
PMID:22660580 GO_REF:0000107, MGI:5437589 NCBI chr 1:248,112,611...248,147,030
Ensembl chr 1:248,132,090...248,147,029
JBrowse link
G Klhl40 kelch-like family member 40 ISO (MGI:5700633|PMID:25940086) RGD PMID:25940086 MGI:5700633 NCBI chr 8:130,416,265...130,421,871
Ensembl chr 8:130,416,355...130,421,871
JBrowse link
G LOC108348108 heat shock 70 kDa protein 1A IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:2,699,707...2,701,856
Ensembl chr20:4,877,324...4,879,779
Ensembl chr20:4,877,324...4,879,779
JBrowse link
G Lrrk2 leucine-rich repeat kinase 2 ISO (MGI:4454597|PMID:20457918) RGD PMID:20457918 MGI:4454597 NCBI chr 7:132,857,311...133,018,549
Ensembl chr 7:132,857,628...133,018,584
JBrowse link
G Mdm2 MDM2 proto-oncogene ISO (PMID:11278372) RGD PMID:11278372 NCBI chr 7:60,719,060...60,743,618
Ensembl chr 7:60,719,066...60,743,328
JBrowse link
G Nkd2 NKD inhibitor of WNT signaling pathway 2 ISO (PMID:20177058) RGD PMID:20177058 NCBI chr 1:32,054,390...32,085,416
Ensembl chr 1:32,058,044...32,084,877
JBrowse link
G Nop53 NOP53 ribosome biogenesis factor ISO (PMID:25818168), (PMID:27323397)
(MGI:5897550|PMID:21804542)
RGD PMID:21804542, PMID:25818168, PMID:27323397 MGI:5897550 NCBI chr 1:77,836,522...77,843,991
Ensembl chr 1:77,836,196...77,844,189
JBrowse link
G Nub1 negative regulator of ubiquitin-like proteins 1 ISO (PMID:16707496) RGD PMID:16707496 NCBI chr 4:6,950,870...6,981,400
Ensembl chr 4:6,951,478...6,978,073
JBrowse link
G Pabir1 PP2A Aalpha (PPP2R1A) and B55A (PPP2R2A) interacting phosphatase regulator 1 ISS
ISO
GO_REF:0000024
(PMID:27588481)
UniProt
RGD
PMID:27588481 GO_REF:0000024 NCBI chr 1:242,372,458...242,373,764
Ensembl chr 1:242,372,458...242,373,764
JBrowse link
G Pias1 protein inhibitor of activated STAT, 1 ISO (MGI:5487503|PMID:22406621) RGD PMID:22406621 MGI:5487503 NCBI chr 8:67,771,720...67,869,015
Ensembl chr 8:67,771,720...67,869,019
JBrowse link
G Plk1 polo-like kinase 1 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:19473992)
Ensembl
UniProt
RGD
PMID:19473992 GO_REF:0000024, GO_REF:0000107 NCBI chr 1:192,115,990...192,125,969
Ensembl chr 1:192,115,966...192,125,989
JBrowse link
G Plk2 polo-like kinase 2 IMP RGD PMID:18723513 RGD:7241135 NCBI chr 2:41,911,143...41,916,901
Ensembl chr 2:41,911,131...41,916,901
JBrowse link
G Prickle1 prickle planar cell polarity protein 1 ISO
IEA
(PMID:17030191)
GO_REF:0000107
RGD
Ensembl
PMID:17030191 GO_REF:0000107 NCBI chr 7:134,702,964...134,799,437
Ensembl chr 7:134,702,964...134,722,215
JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase IBA
ISO
PMID:21873635
(MGI:5543313|PMID:23858059)
RGD PMID:23858059, PMID:21873635 MGI:5543313, RGD:13792537 NCBI chr 1:48,880,015...50,069,998 JBrowse link
G Psen1 presenilin 1 ISO (MGI:4887523|PMID:20208556) RGD PMID:20208556 MGI:4887523 NCBI chr 6:107,169,514...107,221,000
Ensembl chr 6:107,169,528...107,216,798
JBrowse link
G Psen2 presenilin 2 ISO (MGI:4887523|PMID:20208556) RGD PMID:20208556 MGI:4887523 NCBI chr13:98,513,600...98,539,347
Ensembl chr13:98,513,570...98,530,724
JBrowse link
G Psmd10 proteasome 26S subunit, non-ATPase 10 ISO
IEA
ISS
(PMID:16023600)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:16023600 GO_REF:0000024, GO_REF:0000107 NCBI chr  X:112,323,188...112,328,642
Ensembl chr  X:112,323,187...112,328,642
JBrowse link
G Rack1 receptor for activated C kinase 1 ISO
ISS
(PMID:19785988)
GO_REF:0000024
RGD
UniProt
PMID:19785988 GO_REF:0000024 NCBI chr10:34,149,717...34,155,198
Ensembl chr10:34,149,717...34,155,198
Ensembl chr12:34,149,717...34,155,198
JBrowse link
G Rad23a RAD23 homolog A, nucleotide excision repair protein ISO (PMID:26296656) RGD PMID:26296656 NCBI chr19:25,949,488...25,956,677
Ensembl chr19:25,949,490...25,955,391
JBrowse link
G Rbx1 ring-box 1 ISO UniProtKB:Q7L5Y6 (PMID:14739464) RGD PMID:14739464 NCBI chr 7:122,700,849...122,710,907
Ensembl chr 7:122,700,854...122,709,935
JBrowse link
G Rchy1 ring finger and CHY zinc finger domain containing 1 ISO (PMID:19483087) RGD PMID:19483087 NCBI chr14:17,615,968...17,631,715
Ensembl chr14:17,615,968...17,631,714
JBrowse link
G Rnf14 ring finger protein 14 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:31,443,424...31,468,641
Ensembl chr18:31,444,472...31,468,640
JBrowse link
G Rnf144a ring finger protein 144A IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:45,509,895...45,629,233
Ensembl chr 6:45,509,787...45,629,168
JBrowse link
G Rnf144b ring finger protein 144B IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:17,817,122...17,947,777
Ensembl chr17:17,817,100...17,947,777
JBrowse link
G Rnf180 ring finger protein 180 IBA
ISO
PMID:21873635
(MGI:3819024|PMID:18363970), (MGI:5505713|PMID:23926250)
RGD PMID:18363970, PMID:23926250, PMID:21873635 MGI:3819024, MGI:5505713, RGD:13792537 NCBI chr 2:35,718,100...35,892,578
Ensembl chr 2:35,718,889...35,870,578
JBrowse link
G Rnf19a ring finger protein 19A, RBR E3 ubiquitin protein ligase IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:75,058,758...75,098,331
Ensembl chr 7:75,058,758...75,098,331
JBrowse link
G Rnf19b ring finger protein 19B IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:147,246,032...147,270,892
Ensembl chr 5:147,246,037...147,270,957
JBrowse link
G Rnf217 ring finger protein 217 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:28,301,960...28,391,582
Ensembl chr 1:28,301,922...28,390,837
JBrowse link
G Sh3rf2 SH3 domain containing ring finger 2 IMP
ISO
PMID:22128169
(PMID:22128169)
RGD PMID:22128169, PMID:22128169 RGD:13673844 NCBI chr18:36,371,041...36,471,020
Ensembl chr18:36,371,041...36,471,015
JBrowse link
G Sirt2 sirtuin 2 ISS
ISO
GO_REF:0000024
(MGI:5574427|PMID:24681946)
UniProt
RGD
PMID:24681946 GO_REF:0000024, MGI:5574427 NCBI chr 1:86,948,866...86,971,954
Ensembl chr 1:86,948,918...86,971,952
JBrowse link
G Smad7 SMAD family member 7 ISO
IEA
(PMID:11278251)
GO_REF:0000107
RGD
Ensembl
PMID:11278251 GO_REF:0000107 NCBI chr18:71,395,830...71,424,164
Ensembl chr18:71,395,830...71,424,157
JBrowse link
G Socs5 suppressor of cytokine signaling 5 ISO (PMID:15590694) RGD PMID:15590694 NCBI chr 6:10,671,311...10,705,610
Ensembl chr 6:10,674,371...10,704,977
JBrowse link
G Stub1 STIP1 homology and U-box containing protein 1 ISO (PMID:11146632) RGD PMID:11146632 NCBI chr10:15,197,754...15,200,035
Ensembl chr10:15,197,803...15,200,117
JBrowse link
G Sumo1 small ubiquitin-like modifier 1 ISO (PMID:18408734) RGD PMID:18408734 NCBI chr 9:66,453,428...66,483,614
Ensembl chr 9:66,453,438...66,483,614
JBrowse link
G Sumo2 small ubiquitin-like modifier 2 ISO (PMID:18408734) RGD PMID:18408734 NCBI chr10:104,085,401...104,097,983
Ensembl chr10:104,086,002...104,097,812
JBrowse link
G Taf1 TATA-box binding protein associated factor 1 ISO (PMID:15053879) RGD PMID:15053879 NCBI chr  X:71,412,291...71,486,456
Ensembl chr  X:71,412,289...71,485,085
JBrowse link
G Trib1 tribbles pseudokinase 1 IBA
ISO
PMID:21873635
(MGI:4457446|PMID:20410507)
RGD PMID:20410507, PMID:21873635 MGI:4457446, RGD:13792537 NCBI chr 7:99,954,492...99,961,026
Ensembl chr 7:99,954,492...99,961,026
JBrowse link
G Trib2 tribbles pseudokinase 2 IBA
ISO
PMID:21873635
(MGI:4457446|PMID:20410507)
RGD PMID:20410507, PMID:21873635 MGI:4457446, RGD:13792537 NCBI chr 6:41,016,722...41,040,972
Ensembl chr 6:41,016,730...41,039,437
JBrowse link
G Trib3 tribbles pseudokinase 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:147,814,056...147,819,650
Ensembl chr 3:147,813,473...147,819,571
JBrowse link
G Ube2v2 ubiquitin conjugating enzyme E2 V2 IMP RGD PMID:12750002 RGD:1299567 NCBI chr11:89,557,273...89,591,175
Ensembl chr11:89,557,273...89,591,175
JBrowse link
G Usp5 ubiquitin specific peptidase 5 ISO (PMID:19098288) RGD PMID:19098288 NCBI chr 4:157,332,735...157,347,803
Ensembl chr 4:157,332,740...157,347,803
JBrowse link
G Vcp valosin-containing protein ISO (PMID:9452483) RGD PMID:9452483 NCBI chr 5:58,426,548...58,445,953
Ensembl chr 5:58,426,549...58,445,953
JBrowse link
G Zer1 zyg-11 related, cell cycle regulator ISO (PMID:31273098) RGD PMID:31273098 NCBI chr 3:8,662,579...8,690,486
Ensembl chr 3:8,662,579...8,690,305
JBrowse link
G Zfand2a zinc finger AN1-type containing 2A ISO MGI:3664591 (MGI:3663213|PMID:16973439) RGD PMID:16973439 MGI:3663213 NCBI chr12:17,252,093...17,263,477
Ensembl chr12:17,252,093...17,263,477
JBrowse link
G Zyg11b zyg-11 family member B, cell cycle regulator ISO (PMID:31273098) RGD PMID:31273098 NCBI chr 5:127,844,062...127,878,792
Ensembl chr 5:127,847,129...127,878,792
JBrowse link
positive regulation of proteasomal ubiquitin-dependent protein catabolic process involved in cellular response to hypoxia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plk3 polo-like kinase 3 ISO
ISS
(PMID:20889502)
GO_REF:0000024
RGD
UniProt
PMID:20889502 GO_REF:0000024 NCBI chr 5:135,997,725...136,002,900
Ensembl chr 5:135,997,725...136,002,900
JBrowse link
G Sirt2 sirtuin 2 IEA
ISO
ISS
GO_REF:0000107
(PMID:24681946)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:24681946 GO_REF:0000024, GO_REF:0000107 NCBI chr 1:86,948,866...86,971,954
Ensembl chr 1:86,948,918...86,971,952
JBrowse link
positive regulation of transcription factor catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fbxw8 F-box and WD repeat domain containing 8 ISO (MGI:6148490|PMID:29153991) RGD PMID:29153991 MGI:6148490 NCBI chr12:44,046,204...44,138,138
Ensembl chr12:44,046,217...44,138,138
JBrowse link
G Mapk8 mitogen-activated protein kinase 8 ISO (MGI:6148490|PMID:29153991) RGD PMID:29153991 MGI:6148490 NCBI chr16:9,620,854...9,709,342
Ensembl chr16:9,625,177...9,709,347
JBrowse link
G Mapk9 mitogen-activated protein kinase 9 IEA
ISO
GO_REF:0000107
(MGI:6148490|PMID:29153991)
Ensembl
RGD
PMID:29153991 GO_REF:0000107, MGI:6148490 NCBI chr10:35,333,859...35,374,364
Ensembl chr10:35,333,859...35,374,355
JBrowse link
G Sirt6 sirtuin 6 ISO (PMID:27457971) RGD PMID:27457971 NCBI chr 7:10,937,622...10,943,048
Ensembl chr 7:10,937,599...10,943,063
JBrowse link
positive regulation of ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agbl4 ATP/GTP binding protein-like 4 ISO MGI:5788002 (MGI:6149282|PMID:29593216) RGD PMID:29593216 MGI:6149282 NCBI chr 5:130,742,297...131,656,581
NCBI chr 5:130,286,393...130,305,884
Ensembl chr 5:131,380,297...131,455,211
Ensembl chr 5:131,380,297...131,455,211
JBrowse link
G Agtpbp1 ATP/GTP binding protein 1 IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr17:5,510,009...5,614,416
Ensembl chr17:5,511,385...5,614,435
JBrowse link
G Axin1 axin 1 IDA
ISO
PMID:10228155
(MGI:3628833|PMID:16601693)
RGD PMID:16601693, PMID:10228155 MGI:3628833, RGD:8553327
G Ccdc22 coiled-coil domain containing 22 ISO
IBA
(PMID:23563313)
PMID:21873635
RGD PMID:23563313, PMID:21873635 RGD:13792537 NCBI chr  X:15,742,978...15,754,925
Ensembl chr  X:15,742,978...15,754,925
JBrowse link
G Cdk5rap3 CDK5 regulatory subunit associated protein 3 NOT ISO
ISS
(PMID:16173922)
GO_REF:0000024
RGD
UniProt
PMID:16173922 GO_REF:0000024 NCBI chr10:84,780,644...84,789,800
Ensembl chr10:84,780,608...84,789,832
JBrowse link
G Clu clusterin ISO
IBA
ISS
(PMID:20068069)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:20068069, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr15:42,626,612...42,665,858
Ensembl chr15:42,640,146...42,665,857
JBrowse link
G Disc1 DISC1 scaffold protein ISO (MGI:4837265|PMID:20880836) RGD PMID:20880836 MGI:4837265 NCBI chr19:57,818,838...58,069,992
Ensembl chr19:57,820,260...58,066,152
JBrowse link
G Egf epidermal growth factor ISO (MGI:4887523|PMID:20208556) RGD PMID:20208556 MGI:4887523 NCBI chr 2:68,820,616...68,895,537 JBrowse link
G Fbxo22 F-box protein 22 ISO (MGI:3840749|PMID:19319192) RGD PMID:19319192 MGI:3840749 NCBI chr 8:59,770,032...59,786,061
Ensembl chr 8:59,769,994...59,786,065
JBrowse link
G Fbxw7 F-box and WD repeat domain containing 7 ISS
ISO
GO_REF:0000024
(MGI:6282935|PMID:27238018)
(PMID:20208556), (PMID:27238018)
UniProt
RGD
PMID:20208556, PMID:27238018 GO_REF:0000024, MGI:6282935 NCBI chr 2:184,230,191...184,309,805
Ensembl chr 2:184,231,260...184,309,664
JBrowse link
G Laptm5 lysosomal protein transmembrane 5 ISO (MGI:3803048|PMID:18619870) RGD PMID:18619870 MGI:3803048 NCBI chr 5:149,015,793...149,069,719
Ensembl chr 5:149,047,681...149,069,719
JBrowse link
G Pten phosphatase and tensin homolog ISO (PMID:21241890) RGD PMID:21241890 NCBI chr 1:251,421,814...251,487,634
Ensembl chr 1:251,421,596...251,487,832
JBrowse link
G Ptk2 protein tyrosine kinase 2 IEA
ISO
ISS
GO_REF:0000107
(MGI:5306293|PMID:18206965)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:18206965 GO_REF:0000024, GO_REF:0000107, MGI:5306293 NCBI chr 7:114,436,419...114,611,317
Ensembl chr 7:114,437,361...114,590,119
JBrowse link
G Ptk2b protein tyrosine kinase 2 beta ISS
ISO
GO_REF:0000024
(MGI:4453113|PMID:19880522)
UniProt
RGD
PMID:19880522 GO_REF:0000024, MGI:4453113 NCBI chr15:42,827,306...42,947,796
Ensembl chr15:42,827,310...42,947,656
JBrowse link
G Rnf139 ring finger protein 139 ISO (PMID:25239945) RGD PMID:25239945 NCBI chr 7:98,770,840...98,782,025
Ensembl chr 7:98,770,840...98,782,025
JBrowse link
G Smurf1 SMAD specific E3 ubiquitin protein ligase 1 ISO (PMID:21454619) RGD PMID:21454619 NCBI chr12:11,433,815...11,526,465
Ensembl chr12:11,407,213...11,526,465
JBrowse link
G Sumo3 small ubiquitin-like modifier 3 ISO (MGI:3813414|PMID:18644859) RGD PMID:18644859 MGI:3813414 NCBI chr20:11,726,488...11,737,050
Ensembl chr20:11,726,497...11,737,050
JBrowse link
G Trim67 tripartite motif-containing 67 ISO (MGI:5427306|PMID:22337885) RGD PMID:22337885 MGI:5427306 NCBI chr19:57,554,665...57,593,401
Ensembl chr19:57,556,694...57,592,722
JBrowse link
G Vcp valosin-containing protein IMP RGD PMID:16103111 RGD:1599730 NCBI chr 5:58,426,548...58,445,953
Ensembl chr 5:58,426,549...58,445,953
JBrowse link
regulation of ER-associated ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Herpud1 homocysteine inducible ER protein with ubiquitin like domain 1 IBA
ISO
PMID:21873635
(MGI:5613477|PMID:15147274)
RGD PMID:15147274, PMID:21873635 MGI:5613477, RGD:13792537 NCBI chr19:11,046,905...11,057,440
Ensembl chr19:11,046,909...11,057,254
JBrowse link
regulation of proteasomal ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Araf A-Raf proto-oncogene, serine/threonine kinase ISO
ISS
(PMID:22609986)
GO_REF:0000024
RGD
UniProt
PMID:22609986 GO_REF:0000024 NCBI chr  X:1,369,534...1,391,603
Ensembl chr  X:1,379,194...1,390,873
JBrowse link
G Commd1 copper metabolism domain containing 1 ISO
IBA
(PMID:17183367)
PMID:21873635
RGD PMID:17183367, PMID:21873635 RGD:13792537 NCBI chr14:107,664,321...107,759,974
Ensembl chr14:107,664,255...107,760,191
JBrowse link
G Desi1 desumoylating isopeptidase 1 ISO (PMID:29666234) RGD PMID:29666234 NCBI chr 7:123,238,332...123,259,636
Ensembl chr 7:123,238,333...123,259,636
JBrowse link
G Foxf2 forkhead box F2 ISO (PMID:29374064) RGD PMID:29374064 NCBI chr17:34,150,417...34,156,450 JBrowse link
G Glmn glomulin, FKBP associated protein ISO (PMID:22405651) RGD PMID:22405651 NCBI chr14:3,204,390...3,247,703
Ensembl chr14:3,204,390...3,247,695
JBrowse link
G Gna12 G protein subunit alpha 12 ISO
ISS
(PMID:22609986)
(MGI:5448916|PMID:22609986)
GO_REF:0000024
RGD
UniProt
PMID:22609986 GO_REF:0000024, MGI:5448916 NCBI chr12:15,890,202...15,971,212
Ensembl chr12:15,890,170...15,971,212
JBrowse link
G Rad23a RAD23 homolog A, nucleotide excision repair protein ISO (PMID:12643283) RGD PMID:12643283 NCBI chr19:25,949,488...25,956,677
Ensembl chr19:25,949,490...25,955,391
JBrowse link
G Rad23b RAD23 homolog B, nucleotide excision repair protein ISO (PMID:19435460) RGD PMID:19435460 NCBI chr 5:72,103,704...72,141,701
Ensembl chr 5:72,103,704...72,141,700
JBrowse link
G Ube2k ubiquitin-conjugating enzyme E2K ISO MGI:3809822 (MGI:3806928|PMID:18710920) RGD PMID:18710920 MGI:3806928 NCBI chr14:44,289,247...44,348,691
Ensembl chr14:44,289,247...44,348,691
JBrowse link
G Ubqln4 ubiquilin 4 ISO (PMID:15280365), (PMID:27113755) RGD PMID:15280365, PMID:27113755 NCBI chr 2:187,915,701...187,931,035
Ensembl chr 2:187,915,751...187,931,035
JBrowse link
G Ufl1 Ufm1-specific ligase 1 ISO
IBA
(PMID:20228063)
PMID:21873635
RGD PMID:20228063, PMID:21873635 RGD:13792537 NCBI chr 5:39,616,479...39,650,894
Ensembl chr 5:39,615,956...39,650,895
JBrowse link
G Wnt10b Wnt family member 10B ISO MGI:3582610 (MGI:3820325|PMID:19056892) RGD PMID:19056892 MGI:3820325 NCBI chr 7:140,448,284...140,466,159
Ensembl chr 7:140,448,465...140,454,268
JBrowse link
G Xpo1 exportin 1 ISO (PMID:29666234) RGD PMID:29666234 NCBI chr14:108,007,421...108,049,088
Ensembl chr14:108,007,724...108,049,660
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20020
    metabolic process 12263
      primary metabolic process 10900
        protein metabolic process 6221
          proteolysis 1893
            regulation of proteolysis 811
              regulation of proteolysis involved in cellular protein catabolic process 219
                regulation of ubiquitin-dependent protein catabolic process 163
                  negative regulation of ubiquitin-dependent protein catabolic process + 53
                  positive regulation of ubiquitin-dependent protein catabolic process + 103
                  regulation of proteasomal ubiquitin-dependent protein catabolic process + 132
Path 2
Term Annotations click to browse term
  biological_process 20020
    metabolic process 12263
      organic substance metabolic process 11643
        macromolecule metabolic process 10077
          macromolecule catabolic process 1346
            protein catabolic process 995
              cellular protein catabolic process 826
                proteolysis involved in cellular protein catabolic process 769
                  modification-dependent protein catabolic process 655
                    ubiquitin-dependent protein catabolic process 639
                      regulation of ubiquitin-dependent protein catabolic process 163
                        negative regulation of ubiquitin-dependent protein catabolic process + 53
                        positive regulation of ubiquitin-dependent protein catabolic process + 103
                        regulation of proteasomal ubiquitin-dependent protein catabolic process + 132
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.