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ONTOLOGY REPORT - ANNOTATIONS


Term:positive regulation of stem cell proliferation
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Accession:GO:2000648 term browser browse the term
Definition:Any process that activates or increases the frequency, rate or extent of stem cell proliferation.


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positive regulation of stem cell proliferation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Epcam epithelial cell adhesion molecule ISO (PMID:19785009) RGD PMID:19785009 NCBI chr 6:11,282,194...11,308,870
Ensembl chr 6:11,281,964...11,298,216
JBrowse link
G Gja1 gap junction protein, alpha 1 ISO (PMID:30599359) RGD PMID:30599359 NCBI chr20:37,876,650...37,889,097
Ensembl chr20:37,876,650...37,889,089
JBrowse link
G Hdac5 histone deacetylase 5 ISO (MGI:MGI:4461095|PMID:20123967) RGD PMID:20123967 MGI:MGI:4461095 NCBI chr10:90,140,183...90,169,853
Ensembl chr10:90,140,183...90,151,042
JBrowse link
G Hmga2 high mobility group AT-hook 2 ISO
ISS
MGI:MGI:2386412 (MGI:MGI:3829847|PMID:18957199)
(PMID:17624332), (PMID:21484705)
GO_REF:0000024
RGD
UniProt
PMID:17624332, PMID:18957199, PMID:21484705 GO_REF:0000024, MGI:MGI:3829847 NCBI chr 7:65,159,944...65,275,408
Ensembl chr 7:65,159,944...65,275,408
JBrowse link
G Hnrnpu heterogeneous nuclear ribonucleoprotein U ISO (MGI:MGI:4831049|PMID:20833368) RGD PMID:20833368 MGI:MGI:4831049 NCBI chr13:96,222,093...96,238,845
Ensembl chr13:96,225,912...96,238,572
JBrowse link
G Kdm1a lysine demethylase 1A ISO (MGI:MGI:4461095|PMID:20123967) RGD PMID:20123967 MGI:MGI:4461095 NCBI chr 5:154,909,003...154,965,171
Ensembl chr 5:154,909,003...154,965,171
JBrowse link
G Mir205 microRNA 205 ISO (MGI:MGI:5514438|PMID:23974039) RGD PMID:23974039 MGI:MGI:5514438 NCBI chr13:112,233,283...112,233,390
Ensembl chr13:112,233,283...112,233,390
JBrowse link
G Mir320a microRNA 320a ISO (MGI:MGI:5447874|PMID:22925886) RGD PMID:22925886 MGI:MGI:5447874 NCBI chr15:52,134,276...52,134,357
Ensembl chr15:52,134,276...52,134,357
JBrowse link
G Nanog Nanog homeobox ISO (PMID:16501172) RGD PMID:16501172 NCBI chr 4:155,531,906...155,539,268
Ensembl chr 4:155,531,906...155,539,268
JBrowse link
G Nfya nuclear transcription factor Y subunit alpha ISO (MGI:MGI:5474438|PMID:22969033) RGD PMID:22969033 MGI:MGI:5474438 NCBI chr 9:14,551,752...14,577,002
Ensembl chr 9:14,551,758...14,576,967
JBrowse link
G Ngf nerve growth factor IDA RGD PMID:18846328 RGD:2303808 NCBI chr 2:204,886,158...204,939,523
Ensembl chr 2:204,886,202...204,940,453
JBrowse link
G Nr2e1 nuclear receptor subfamily 2, group E, member 1 ISO (MGI:MGI:4461095|PMID:20123967) RGD PMID:20123967 MGI:MGI:4461095 NCBI chr20:47,286,843...47,306,318
Ensembl chr20:47,288,137...47,306,318
JBrowse link
G Ptprc protein tyrosine phosphatase, receptor type, C ISO (PMID:21911094) RGD PMID:21911094 NCBI chr13:55,061,561...55,174,150
Ensembl chr13:55,061,562...55,173,692
JBrowse link
G Setd1a SET domain containing 1A, histone lysine methyltransferase ISO MGI:MGI:5568941 (MGI:MGI:5563281|PMID:24550110) RGD PMID:24550110 MGI:MGI:5563281 NCBI chr 1:199,222,584...199,247,993
Ensembl chr 1:199,225,100...199,247,988
JBrowse link
G Sirt6 sirtuin 6 ISO (MGI:MGI:3663736|PMID:16439206) RGD PMID:16439206 MGI:MGI:3663736 NCBI chr 7:10,937,622...10,943,048
Ensembl chr 7:10,937,599...10,943,063
JBrowse link
G Sox11 SRY-box transcription factor 11 ISO
ISS
(PMID:20626275)
GO_REF:0000024
RGD
UniProt
PMID:20626275 GO_REF:0000024 NCBI chr 6:46,629,967...46,631,988
Ensembl chr 6:46,629,974...46,631,983
JBrowse link
G Taf4b TATA-box binding protein associated factor 4b ISO (MGI:MGI:5619438|PMID:23350932) RGD PMID:23350932 MGI:MGI:5619438 NCBI chr18:6,206,939...6,338,794
Ensembl chr18:6,207,280...6,318,219
JBrowse link
G Tbx3 T-box transcription factor 3 ISO MGI:MGI:3769504 (MGI:MGI:3788969|PMID:18356246) RGD PMID:18356246 MGI:MGI:3788969 NCBI chr12:42,479,518...42,494,588
Ensembl chr12:42,480,560...42,492,526
JBrowse link
G Tert telomerase reverse transcriptase ISO (MGI:MGI:3588604|PMID:16037417), (MGI:MGI:3589051|PMID:16107853) RGD PMID:16037417, PMID:16107853 MGI:MGI:3588604, MGI:MGI:3589051 NCBI chr 1:32,250,876...32,275,330
Ensembl chr 1:32,251,714...32,272,476
JBrowse link
positive regulation of hematopoietic stem cell proliferation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atxn1l ataxin 1-like ISO MGI:MGI:5301616 (MGI:MGI:5477838|PMID:23555280) RGD PMID:23555280 MGI:MGI:5477838 NCBI chr19:41,932,356...41,939,456 JBrowse link
G Cxcl1 C-X-C motif chemokine ligand 1 IEA
ISO
GO_REF:0000107
(MGI:MGI:5586806|PMID:10725737)
Ensembl
RGD
PMID:10725737 GO_REF:0000107, MGI:MGI:5586806 NCBI chr14:18,743,678...18,745,457
Ensembl chr14:18,743,685...18,745,457
JBrowse link
G Kat7 lysine acetyltransferase 7 IEA
ISO
ISS
GO_REF:0000107
(MGI:MGI:6392952|PMID:31827282)
(PMID:31827282)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:31827282 GO_REF:0000024, GO_REF:0000107, MGI:MGI:6392952 NCBI chr10:83,095,067...83,128,342
Ensembl chr10:83,095,068...83,128,297
JBrowse link
G Kitlg KIT ligand ISO (MGI:MGI:5433809|PMID:21540074) RGD PMID:21540074 MGI:MGI:5433809 NCBI chr 7:42,269,784...42,351,054
Ensembl chr 7:42,269,784...42,351,054
JBrowse link
G N4bp2l2 NEDD4 binding protein 2-like 2 ISO (PMID:19506020) RGD PMID:19506020 NCBI chr12:627,128...650,604
Ensembl chr12:628,488...650,376
JBrowse link
G Pdcd2 programmed cell death 2 ISO (PMID:22922207) RGD PMID:22922207 NCBI chr 1:57,512,968...57,518,458
Ensembl chr 1:57,512,968...57,518,458
JBrowse link
G Thpo thrombopoietin ISO
IBA
(PMID:21540074)
PMID:21873635
RGD PMID:21540074, PMID:21873635 RGD:13792537 NCBI chr11:82,845,676...82,853,439
Ensembl chr11:83,868,655...83,873,910
Ensembl chr11:83,868,655...83,873,910
JBrowse link
G Thpol1 thrombopoietin like 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:83,867,549...83,874,670
Ensembl chr11:83,868,655...83,873,910
Ensembl chr11:83,868,655...83,873,910
JBrowse link
positive regulation of mesenchymal stem cell proliferation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 IMP RGD PMID:19723531 RGD:9068401 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
JBrowse link
G Ccne1 cyclin E1 ISO
IEA
(PMID:23083510)
GO_REF:0000107
RGD
Ensembl
PMID:23083510 GO_REF:0000107 NCBI chr 1:94,485,830...94,495,112
Ensembl chr 1:94,485,832...94,494,980
JBrowse link
G Fermt2 fermitin family member 2 ISO (PMID:29496737) RGD PMID:29496737 NCBI chr15:19,807,806...19,876,557
Ensembl chr15:19,807,808...19,876,408
JBrowse link
G Ltbp3 latent transforming growth factor beta binding protein 3 ISO (PMID:18672106) RGD PMID:18672106 NCBI chr 1:221,099,155...221,116,096
Ensembl chr 1:221,099,998...221,116,096
JBrowse link
G Vegfc vascular endothelial growth factor C ISO (MGI:MGI:6378108|PMID:26934950) RGD PMID:26934950 MGI:MGI:6378108 NCBI chr16:40,440,371...40,555,178
Ensembl chr16:40,440,207...40,555,576
JBrowse link
positive regulation of neuroblast proliferation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aspm assembly factor for spindle microtubules ISO MGI:MGI:88276 (MGI:MGI:5294271|PMID:21937711) RGD PMID:21937711 MGI:MGI:5294271 NCBI chr13:56,546,021...56,591,793
Ensembl chr13:56,546,021...56,591,793
JBrowse link
G Bex1 brain expressed, X-linked 1 IDA PMID:16498402 MGI PMID:16498402 RGD:8554704 NCBI chr  X:106,761,388...106,771,656 JBrowse link
G Ctnnb1 catenin beta 1 IEA
ISO
ISS
GO_REF:0000107
MGI:MGI:1334448 (MGI:MGI:4941059|PMID:21325504), (MGI:MGI:5294271|PMID:21937711)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:21325504, PMID:21937711 GO_REF:0000024, GO_REF:0000107, MGI:MGI:4941059, MGI:MGI:5294271 NCBI chr 8:129,601,511...129,628,378
Ensembl chr 8:129,617,812...129,627,372
JBrowse link
G Cx3cl1 C-X3-C motif chemokine ligand 1 IDA RGD PMID:20018408 RGD:9491804 NCBI chr19:10,644,267...10,654,861
Ensembl chr19:10,644,244...10,653,800
JBrowse link
G Cx3cr1 C-X3-C motif chemokine receptor 1 IMP RGD PMID:20018408 RGD:9491804 NCBI chr 8:128,740,756...128,754,514
Ensembl chr 8:128,740,756...128,754,514
JBrowse link
G Dct dopachrome tautomerase ISO (MGI:MGI:3701732|PMID:16857183) RGD PMID:16857183 MGI:MGI:3701732 NCBI chr15:103,208,174...103,245,033
Ensembl chr15:103,208,258...103,244,494
JBrowse link
G Disc1 DISC1 scaffold protein ISO (PMID:19303846)
(MGI:MGI:3841497|PMID:19303846)
RGD PMID:19303846 MGI:MGI:3841497 NCBI chr19:57,818,838...58,069,992
Ensembl chr19:57,820,260...58,066,152
JBrowse link
G Dmrta2 DMRT-like family A2 ISO MGI:MGI:5527461 (MGI:MGI:5524255|PMID:23056351) RGD PMID:23056351 MGI:MGI:5524255 NCBI chr 5:129,754,295...129,760,045
Ensembl chr 5:129,756,149...129,758,986
JBrowse link
G Drd2 dopamine receptor D2 ISO (MGI:MGI:3710436|PMID:17426594) RGD PMID:17426594 MGI:MGI:3710436 NCBI chr 8:53,678,777...53,743,643
Ensembl chr 8:53,678,777...53,743,642
JBrowse link
G Foxg1 forkhead box G1 ISO MGI:MGI:1932522 (MGI:MGI:3581994|PMID:15893304) RGD PMID:15893304 MGI:MGI:3581994 NCBI chr 6:69,971,227...69,974,037
Ensembl chr 6:69,971,227...69,974,037
JBrowse link
G Fzd3 frizzled class receptor 3 ISO (MGI:MGI:4941059|PMID:21325504) RGD PMID:21325504 MGI:MGI:4941059 NCBI chr15:48,601,259...48,670,257
Ensembl chr15:48,601,266...48,670,257
JBrowse link
G Gli3 GLI family zinc finger 3 ISO MGI:MGI:1856282 (MGI:MGI:4837563|PMID:20943929) RGD PMID:20943929 MGI:MGI:4837563 NCBI chr17:52,294,942...52,569,036
Ensembl chr17:52,294,942...52,569,036
JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha ISO
IEA
MGI:MGI:103178 (MGI:MGI:3695975|PMID:17215402)
GO_REF:0000107
RGD
Ensembl
PMID:17215402 GO_REF:0000107, MGI:MGI:3695975 NCBI chr 6:96,810,868...96,856,303
Ensembl chr 6:96,810,907...96,856,052
JBrowse link
G Kdm1a lysine demethylase 1A ISO (PMID:23400681) RGD PMID:23400681 NCBI chr 5:154,909,003...154,965,171
Ensembl chr 5:154,909,003...154,965,171
JBrowse link
G Mapk8 mitogen-activated protein kinase 8 IMP RGD PMID:24388750 RGD:10047173 NCBI chr16:9,620,854...9,709,342
Ensembl chr16:9,625,177...9,709,347
JBrowse link
G Notch1 notch receptor 1 IMP RGD PMID:19109527 RGD:2325303 NCBI chr 3:3,905,562...3,951,015
Ensembl chr 3:3,905,453...3,951,025
JBrowse link
G Otp orthopedia homeobox ISO MGI:MGI:2180541 (MGI:MGI:1347696|PMID:10557207) RGD PMID:10557207 MGI:MGI:1347696 NCBI chr 2:24,546,393...24,554,953
Ensembl chr 2:24,546,536...24,554,683
JBrowse link
G Pax6 paired box 6 ISO
IEA
(MGI:MGI:3784651|PMID:18287938)
GO_REF:0000107
RGD
Ensembl
PMID:18287938 GO_REF:0000107, MGI:MGI:3784651 NCBI chr 3:95,700,241...95,728,682
Ensembl chr 3:95,707,386...95,728,624
JBrowse link
G Shh sonic hedgehog signaling molecule IMP
IEA
ISO
GO_REF:0000107
(MGI:MGI:2154469|PMID:11748155)
Ensembl
RGD
PMID:11748155, PMID:12469128 GO_REF:0000107, MGI:MGI:2154469, RGD:729868 NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691
JBrowse link
G Smarcd3 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 ISO (PMID:18816825) RGD PMID:18816825 NCBI chr 4:7,076,710...7,108,334
Ensembl chr 4:7,076,759...7,108,328
JBrowse link
G Smo smoothened, frizzled class receptor ISO
IEA
MGI:MGI:88274 (MGI:MGI:3619284|PMID:16543460)
GO_REF:0000107
RGD
Ensembl
PMID:16543460 GO_REF:0000107, MGI:MGI:3619284 NCBI chr 4:57,019,941...57,041,779
Ensembl chr 4:57,019,941...57,042,770
JBrowse link
G Sox10 SRY-box transcription factor 10 ISO (MGI:MGI:3701732|PMID:16857183) RGD PMID:16857183 MGI:MGI:3701732 NCBI chr 7:120,393,238...120,403,523
Ensembl chr 7:120,393,254...120,403,523
JBrowse link
G Sox2 SRY-box transcription factor 2 ISO MGI:MGI:2181440|MGI:MGI:3052123|MGI:MGI:3625176 (MGI:MGI:3051708|PMID:15240551), (MGI:MGI:3624065|PMID:16651659) RGD PMID:15240551, PMID:16651659 MGI:MGI:3051708, MGI:MGI:3624065 NCBI chr 2:121,165,137...121,167,545
Ensembl chr 2:121,165,137...121,167,545
JBrowse link
G Vegfa vascular endothelial growth factor A ISO MGI:MGI:106918 (MGI:MGI:3695975|PMID:17215402) RGD PMID:17215402 MGI:MGI:3695975 NCBI chr 9:17,340,341...17,355,681
Ensembl chr 9:17,340,341...17,355,681
JBrowse link
G Vegfc vascular endothelial growth factor C IDA PMID:16462734 MGI PMID:16462734 RGD:8554518 NCBI chr16:40,440,371...40,555,178
Ensembl chr16:40,440,207...40,555,576
JBrowse link
G Wdr62 WD repeat domain 62 IMP RGD PMID:24388750 RGD:10047173 NCBI chr 1:90,995,545...91,034,592
Ensembl chr 1:88,694,824...88,734,223
JBrowse link
G Zfp335 zinc finger protein 335 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(MGI:MGI:5468205|PMID:23178126)
Ensembl
UniProt
RGD
PMID:23178126 GO_REF:0000024, GO_REF:0000107, MGI:MGI:5468205 NCBI chr 3:161,357,201...161,378,073
Ensembl chr 3:161,357,278...161,376,119
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20027
    positive regulation of biological process 6652
      positive regulation of cellular process 6149
        positive regulation of cell population proliferation 1064
          positive regulation of stem cell proliferation 57
            positive regulation of hematopoietic stem cell proliferation 8
            positive regulation of mesenchymal stem cell proliferation 5
            positive regulation of neuroblast proliferation 27
Path 2
Term Annotations click to browse term
  biological_process 20027
    biological regulation 13773
      regulation of biological process 13075
        positive regulation of biological process 6652
          positive regulation of cellular process 6149
            positive regulation of cell population proliferation 1064
              positive regulation of stem cell proliferation 57
                positive regulation of hematopoietic stem cell proliferation 8
                positive regulation of mesenchymal stem cell proliferation 5
                positive regulation of neuroblast proliferation 27
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.