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ONTOLOGY REPORT - ANNOTATIONS


Term:Postnatal microcephaly
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Accession:HP:0005484 term browser browse the term
Definition:Head circumference which falls below 2 standard deviations below the mean for age and gender because of insufficient head growth after birth.
Synonyms:exact_synonym: Deceleration of head growth;   Postnatal deceleration of head circumference;   Secondary microcephaly;   acquired microcephaly
 broad_synonym: development of small head that was not present at birth
 alt_id: HP:0000241;   HP:0000259;   HP:0005499
 xref: UMLS:C1847514


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Postnatal microcephaly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ACTG1 actin gamma 1 JBrowse link 17 81,509,971 81,512,866 RGD:8699517
G ARNT2 aryl hydrocarbon receptor nuclear translocator 2 JBrowse link 15 80,404,350 80,597,937 RGD:8699517
G CARS2 cysteinyl-tRNA synthetase 2, mitochondrial JBrowse link 13 110,641,410 110,713,601 RGD:8699517
G CERT1 ceramide transporter 1 JBrowse link 5 75,368,486 75,511,981 RGD:8699517
G CHMP1A charged multivesicular body protein 1A JBrowse link 16 89,644,431 89,657,785 RGD:8699517
G CLTC clathrin heavy chain JBrowse link 17 59,619,689 59,696,956 RGD:8699517
G COG2 component of oligomeric golgi complex 2 JBrowse link 1 230,642,456 230,693,985 RGD:8699517
G COQ9 coenzyme Q9 JBrowse link 16 57,447,425 57,461,275 RGD:8699517
G CTNNA2 catenin alpha 2 JBrowse link 2 79,505,054 80,648,868 RGD:8699517
G DHFR dihydrofolate reductase JBrowse link 5 80,626,226 80,654,981 RGD:8699517
G DOLK dolichol kinase JBrowse link 9 128,945,530 128,947,733 RGD:8699517
G DPM1 dolichyl-phosphate mannosyltransferase subunit 1, catalytic JBrowse link 20 50,934,855 50,958,564 RGD:8699517
G DPM2 dolichyl-phosphate mannosyltransferase subunit 2, regulatory JBrowse link 9 127,935,095 127,938,484 RGD:8699517
G EEF1A2 eukaryotic translation elongation factor 1 alpha 2 JBrowse link 20 63,488,012 63,499,315 RGD:8699517
G EFTUD2 elongation factor Tu GTP binding domain containing 2 JBrowse link 17 44,850,287 44,899,625 RGD:8699517
G EMC1 ER membrane protein complex subunit 1 JBrowse link 1 19,215,664 19,251,559 RGD:8699517
G FGF12 fibroblast growth factor 12 JBrowse link 3 192,139,393 192,727,599 RGD:8699517
G FOXRED1 FAD dependent oxidoreductase domain containing 1 JBrowse link 11 126,269,040 126,278,132 RGD:8699517
G GABRB2 gamma-aminobutyric acid type A receptor beta2 subunit JBrowse link 5 161,288,429 161,548,124 RGD:8699517
G GLS glutaminase JBrowse link 2 190,880,821 190,965,552 RGD:8699517
G GPT2 glutamic--pyruvic transaminase 2 JBrowse link 16 46,884,380 46,931,297 RGD:8699517
G HSPD1 heat shock protein family D (Hsp60) member 1 JBrowse link 2 197,486,584 197,500,274 RGD:8699517
G HTRA2 HtrA serine peptidase 2 JBrowse link 2 74,529,405 74,533,556 RGD:8699517
G IQSEC2 IQ motif and Sec7 domain ArfGEF 2 JBrowse link X 53,225,784 53,321,356 RGD:8699517
G JAM3 junctional adhesion molecule 3 JBrowse link 11 134,068,925 134,151,757 RGD:8699517
G MECP2 methyl-CpG binding protein 2 JBrowse link X 154,021,800 154,097,731 RGD:8699517
G MED17 mediator complex subunit 17 JBrowse link 11 93,784,239 93,813,330 RGD:8699517
G MICOS13 mitochondrial contact site and cristae organizing system subunit 13 JBrowse link 19 5,678,414 5,680,896 RGD:8699517
G NDUFA11 NADH:ubiquinone oxidoreductase subunit A11 JBrowse link 19 5,891,276 5,904,013 RGD:8699517
G NEXMIF neurite extension and migration factor JBrowse link X 74,732,856 74,925,452 RGD:8699517
G NTRK2 neurotrophic receptor tyrosine kinase 2 JBrowse link 9 84,668,458 85,027,070 RGD:8699517
G PAFAH1B1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 JBrowse link 17 2,593,210 2,685,617 RGD:8699517
G PCDH12 protocadherin 12 JBrowse link 5 141,943,585 141,959,062 RGD:8699517
G PIGA phosphatidylinositol glycan anchor biosynthesis class A JBrowse link X 15,319,451 15,335,554 RGD:8699517
G PLEKHG2 pleckstrin homology and RhoGEF domain containing G2 JBrowse link 19 39,412,582 39,428,415 RGD:8699517
G PLPBP pyridoxal phosphate binding protein JBrowse link 8 37,762,546 37,779,768 RGD:8699517
G PMPCB peptidase, mitochondrial processing beta subunit JBrowse link 7 103,297,426 103,329,902 RGD:8699517
G PPT1 palmitoyl-protein thioesterase 1 JBrowse link 1 40,072,706 40,097,470 RGD:8699517
G PSAT1 phosphoserine aminotransferase 1 JBrowse link 9 78,297,075 78,330,093 RGD:8699517
G PUF60 poly(U) binding splicing factor 60 JBrowse link 8 143,816,344 143,830,041 RGD:8699517
G RAB18 RAB18, member RAS oncogene family JBrowse link 10 27,504,174 27,542,237 RGD:8699517
G RAB3GAP2 RAB3 GTPase activating non-catalytic protein subunit 2 JBrowse link 1 220,148,268 220,272,501 RGD:8699517
G RUSC2 RUN and SH3 domain containing 2 JBrowse link 9 35,489,833 35,561,898 RGD:8699517
G SCN1A sodium voltage-gated channel alpha subunit 1 JBrowse link 2 165,989,160 166,149,216 RGD:8699517
G SLC12A5 solute carrier family 12 member 5 JBrowse link 20 46,021,690 46,060,150 RGD:8699517
G SLC18A2 solute carrier family 18 member A2 JBrowse link 10 117,241,073 117,279,430 RGD:8699517
G SLC2A1 solute carrier family 2 member 1 JBrowse link 1 42,925,375 42,959,176 RGD:8699517
G SLC39A14 solute carrier family 39 member 14 JBrowse link 8 22,367,230 22,434,129 RGD:8699517
G SMC3 structural maintenance of chromosomes 3 JBrowse link 10 110,567,691 110,604,634 RGD:8699517
G TAF2 TATA-box binding protein associated factor 2 JBrowse link 8 119,730,773 119,832,858 RGD:8699517
G TBC1D20 TBC1 domain family member 20 JBrowse link 20 435,477 462,553 RGD:8699517
G TBC1D24 TBC1 domain family member 24 JBrowse link 16 2,475,104 2,509,669 RGD:8699517
G TBCD tubulin folding cofactor D JBrowse link 17 82,752,048 82,943,186 RGD:8699517
G TMEM165 transmembrane protein 165 JBrowse link 4 55,395,653 55,453,397 RGD:8699517
G TRAPPC2L trafficking protein particle complex 2 like JBrowse link 16 88,856,220 88,862,686 RGD:8699517
G TRAPPC9 trafficking protein particle complex 9 JBrowse link 8 139,727,725 140,458,579 RGD:8699517
G UBA5 ubiquitin like modifier activating enzyme 5 JBrowse link 3 132,654,446 132,679,786 RGD:8699517
G UBE3A ubiquitin protein ligase E3A JBrowse link 15 25,337,234 25,439,381 RGD:8699517
G VPS11 VPS11 core subunit of CORVET and HOPS complexes JBrowse link 11 119,067,752 119,081,978 RGD:8699517
G WDR73 WD repeat domain 73 JBrowse link 15 84,641,495 84,654,343 RGD:8699517
Cessation of head growth term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G EIF2B1 eukaryotic translation initiation factor 2B subunit alpha JBrowse link 12 123,621,023 123,633,776 RGD:8699517
G EIF2B2 eukaryotic translation initiation factor 2B subunit beta JBrowse link 14 75,002,909 75,009,591 RGD:8699517
G EIF2B3 eukaryotic translation initiation factor 2B subunit gamma JBrowse link 1 44,850,522 44,986,722 RGD:8699517
G EIF2B4 eukaryotic translation initiation factor 2B subunit delta JBrowse link 2 27,364,352 27,370,457 RGD:8699517
G EIF2B5 eukaryotic translation initiation factor 2B subunit epsilon JBrowse link 3 184,135,022 184,145,311 RGD:8699517
Progressive microcephaly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ACO2 aconitase 2 JBrowse link 22 41,468,756 41,528,989 RGD:8699517
G ALG12 ALG12 alpha-1,6-mannosyltransferase JBrowse link 22 49,860,163 49,918,469 RGD:8699517
G AMPD2 adenosine monophosphate deaminase 2 JBrowse link 1 109,619,813 109,632,055 RGD:8699517
G ARFGEF2 ADP ribosylation factor guanine nucleotide exchange factor 2 JBrowse link 20 48,921,721 49,036,693 RGD:8699517
G ASNS asparagine synthetase (glutamine-hydrolyzing) JBrowse link 7 97,852,117 97,928,562 RGD:8699517
G ATP6V0A2 ATPase H+ transporting V0 subunit a2 JBrowse link 12 123,712,318 123,761,755 RGD:8699517
G ATP6V1A ATPase H+ transporting V1 subunit A JBrowse link 3 113,747,019 113,812,058 RGD:8699517
G ATP6V1E1 ATPase H+ transporting V1 subunit E1 JBrowse link 22 17,592,136 17,628,822 RGD:8699517
G BRAT1 BRCA1 associated ATM activator 1 JBrowse link 7 2,537,810 2,555,758 RGD:8699517
G CASK calcium/calmodulin dependent serine protein kinase JBrowse link X 41,514,934 41,923,525 RGD:8699517
G CCDC88A coiled-coil domain containing 88A JBrowse link 2 55,287,817 55,419,921 RGD:8699517
G CDC42 cell division cycle 42 JBrowse link 1 22,052,627 22,092,943 RGD:8699517
G CDC45 cell division cycle 45 JBrowse link 22 19,479,294 19,520,612 RGD:8699517
G CDKL5 cyclin dependent kinase like 5 JBrowse link X 18,425,605 18,653,629 RGD:8699517
G CLP1 cleavage and polyadenylation factor I subunit 1 JBrowse link 11 57,657,744 57,661,865 RGD:8699517
G COG1 component of oligomeric golgi complex 1 JBrowse link 17 73,193,034 73,208,507 RGD:8699517
G COG7 component of oligomeric golgi complex 7 JBrowse link 16 23,388,493 23,453,215 RGD:8699517
G CYFIP2 cytoplasmic FMR1 interacting protein 2 JBrowse link 5 157,266,080 157,395,598 RGD:8699517
G EFTUD2 elongation factor Tu GTP binding domain containing 2 JBrowse link 17 44,850,287 44,899,625 RGD:8699517
G EXOSC3 exosome component 3 JBrowse link 9 37,779,714 37,785,092 RGD:8699517
G EXTL3 exostosin like glycosyltransferase 3 JBrowse link 8 28,607,736 28,753,690 RGD:8699517
G FOXG1 forkhead box G1 JBrowse link 14 28,767,072 28,770,277 RGD:8699517
G MECP2 methyl-CpG binding protein 2 JBrowse link X 154,021,800 154,097,731 RGD:8699517
G MED17 mediator complex subunit 17 JBrowse link 11 93,784,239 93,813,330 RGD:8699517
G MFSD2A major facilitator superfamily domain containing 2A JBrowse link 1 39,955,112 39,969,968 RGD:8699517
G MPC1 mitochondrial pyruvate carrier 1 JBrowse link 6 166,364,919 166,383,013 RGD:8699517
G NDUFS1 NADH:ubiquinone oxidoreductase core subunit S1 JBrowse link 2 206,123,079 206,159,519 RGD:8699517
G PCDH12 protocadherin 12 JBrowse link 5 141,943,585 141,959,062 RGD:8699517
G PCLO piccolo presynaptic cytomatrix protein JBrowse link 7 82,754,005 83,164,161 RGD:8699517
G PLAA phospholipase A2 activating protein JBrowse link 9 26,903,370 26,947,473 RGD:8699517
G PNKP polynucleotide kinase 3'-phosphatase JBrowse link 19 49,861,203 49,867,565 RGD:8699517
G PNPO pyridoxamine 5'-phosphate oxidase JBrowse link 17 47,941,523 47,949,308 RGD:8699517
G POMK protein O-mannose kinase JBrowse link 8 43,093,506 43,123,180 RGD:8699517
G PPT1 palmitoyl-protein thioesterase 1 JBrowse link 1 40,072,706 40,097,470 RGD:8699517
G PTRH2 peptidyl-tRNA hydrolase 2 JBrowse link 17 59,697,306 59,707,626 RGD:8699517
G PYCR2 pyrroline-5-carboxylate reductase 2 JBrowse link 1 225,919,877 225,924,340 RGD:8699517
G QARS1 glutaminyl-tRNA synthetase 1 JBrowse link 3 49,095,932 49,105,129 RGD:8699517
G RARS2 arginyl-tRNA synthetase 2, mitochondrial JBrowse link 6 87,513,935 87,590,032 RGD:8699517
G RNASEH2A ribonuclease H2 subunit A JBrowse link 19 12,802,054 12,813,648 RGD:8699517
G RNASEH2C ribonuclease H2 subunit C JBrowse link 11 65,717,673 65,720,938 RGD:8699517
G RNF113A ring finger protein 113A JBrowse link X 119,870,532 119,871,828 RGD:8699517
G RPL10 ribosomal protein L10 JBrowse link X 154,398,065 154,402,339 RGD:8699517
G SCN8A sodium voltage-gated channel alpha subunit 8 JBrowse link 12 51,589,958 51,812,864 RGD:8699517
G SEPSECS Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase JBrowse link 4 25,120,005 25,160,582 RGD:8699517
G SLC1A4 solute carrier family 1 member 4 JBrowse link 2 64,988,445 65,023,865 RGD:8699517
G SLC25A19 solute carrier family 25 member 19 JBrowse link 17 75,272,980 75,289,958 RGD:8699517
G SLC25A22 solute carrier family 25 member 22 JBrowse link 11 790,475 798,281 RGD:8699517
G SLC2A1 solute carrier family 2 member 1 JBrowse link 1 42,925,375 42,959,176 RGD:8699517
G SLC39A14 solute carrier family 39 member 14 JBrowse link 8 22,367,230 22,434,129 RGD:8699517
G SNAP29 synaptosome associated protein 29 JBrowse link 22 20,859,004 20,891,214 RGD:8699517
G SPTAN1 spectrin alpha, non-erythrocytic 1 JBrowse link 9 128,552,558 128,633,665 RGD:8699517
G TOE1 target of EGR1, exonuclease JBrowse link 1 45,339,670 45,343,978 RGD:8699517
G TRAPPC6B trafficking protein particle complex 6B JBrowse link 14 39,147,811 39,170,430 RGD:8699517
G TREX1 three prime repair exonuclease 1 JBrowse link 3 48,465,952 48,467,645 RGD:8699517
G TSEN15 tRNA splicing endonuclease subunit 15 JBrowse link 1 184,051,651 184,095,846 RGD:8699517
G TSEN2 tRNA splicing endonuclease subunit 2 JBrowse link 3 12,484,432 12,539,624 RGD:8699517
G TSEN54 tRNA splicing endonuclease subunit 54 JBrowse link 17 75,516,508 75,524,739 RGD:8699517
G VARS valyl-tRNA synthetase 1 JBrowse link 6 31,777,518 31,795,935 RGD:8699517
G VPS53 VPS53 subunit of GARP complex JBrowse link 17 508,668 714,856 RGD:8699517
G WWOX WW domain containing oxidoreductase JBrowse link 16 78,099,413 79,212,667 RGD:8699517
G ZNHIT3 zinc finger HIT-type containing 3 JBrowse link 17 36,486,627 36,499,310 RGD:8699517
G ZSWIM6 zinc finger SWIM-type containing 6 JBrowse link 5 61,332,273 61,546,172 RGD:8699517

Term paths to the root
Path 1
Term Annotations click to browse term
  Human phenotype 5772
    Phenotypic abnormality 5763
      Abnormality of the nervous system 3085
        Abnormality of nervous system morphology 2311
          Morphological abnormality of the central nervous system 2115
            Aplasia/Hypoplasia involving the central nervous system 1286
              Aplasia/Hypoplasia of the cerebrum 1075
                Microcephaly 893
                  Postnatal microcephaly 120
                    Cessation of head growth 5
                    Progressive microcephaly 62
Path 2
Term Annotations click to browse term
  Human phenotype 5772
    Phenotypic abnormality 5763
      Abnormality of the nervous system 3085
        Abnormality of nervous system morphology 2311
          Morphological abnormality of the central nervous system 2115
            Abnormality of brain morphology 1903
              Abnormality of forebrain morphology 1455
                Abnormality of the cerebrum 1433
                  Aplasia/Hypoplasia of the cerebrum 1075
                    Microcephaly 893
                      Postnatal microcephaly 120
                        Cessation of head growth 5
                        Progressive microcephaly 62
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.