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MAMMALIAN PHENOTYPE - ANNOTATIONS

The Mouse Adult Gross Anatomy Ontology and Mammalian Phenotype Ontology are downloaded weekly from the Mouse Genome Informatics databases at Jackson Laboratories (ftp://ftp.informatics.jax.org/pub/reports/index.html). For more information about these ontologies, see the MGI Publications Page at http://www.informatics.jax.org/mgihome/other/publications.shtml.

Term:abnormal spermatogenesis
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Accession:MP:0001156 term browser browse the term
Definition:incomplete maturation or aberrant formation of the male gametes
Synonyms:exact_synonym: abnormal sperm development


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abnormal spermatogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brca2 BRCA2, DNA repair associated IAGP RGD PMID:16964288 RGD:1599505 NCBI chr12:503,660...544,754
Ensembl chr12:504,007...544,748
JBrowse link
arrest of spermiogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sbf1 SET binding factor 1 IMP RGD PMID:27335132 RGD:38549340 NCBI chr 7:130,261,552...130,288,566
Ensembl chr 7:130,261,552...130,288,509
JBrowse link
G Spata22 spermatogenesis associated 22 treatment IMP RGD PMID:23903057 RGD:38549346 NCBI chr10:59,893,064...59,910,769
Ensembl chr10:59,879,850...59,911,051
JBrowse link
azoospermia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sbf1 SET binding factor 1 IMP RGD PMID:27335132 RGD:38549340 NCBI chr 7:130,261,552...130,288,566
Ensembl chr 7:130,261,552...130,288,509
JBrowse link
short sperm flagellum term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tmem67 transmembrane protein 67 IAGP RGD PMID:19515853 RGD:8554306 NCBI chr 5:25,666,138...25,721,056
Ensembl chr 5:25,666,137...25,721,072
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  mammalian phenotype 4990
    reproductive system phenotype 86
      abnormal reproductive system morphology 62
        abnormal gametogenesis 11
          abnormal spermatogenesis 8
            abnormal male meiosis + 0
            abnormal spermatid morphology + 0
            abnormal spermatocyte morphology 0
            abnormal spermatogonia proliferation 0
            abnormal spermiogenesis + 4
            arrest of spermatogenesis + 4
            azoospermia 2
            necrospermia 0
            oligozoospermia 0
            teratozoospermia + 1
paths to the root