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MAMMALIAN PHENOTYPE - ANNOTATIONS

The Mouse Adult Gross Anatomy Ontology and Mammalian Phenotype Ontology are downloaded weekly from the Mouse Genome Informatics databases at Jackson Laboratories (ftp://ftp.informatics.jax.org/pub/reports/index.html). For more information about these ontologies, see the MGI Publications Page at http://www.informatics.jax.org/mgihome/other/publications.shtml.

Term:abnormal germ cell morphology
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Accession:MP:0002208 term browser browse the term
Definition:any structural anomaly of the germ cell, that is, any of the reproductive (generative) cells of a multicellular organism, whether they are undifferentiated or fully differentiated


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azoospermia term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sbf1 SET binding factor 1 IMP RGD PMID:27335132 RGD:38549340 NCBI chr 7:130,261,552...130,288,566
Ensembl chr 7:130,261,552...130,288,509
JBrowse link
decreased male germ cell number term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tp53 tumor protein p53 IMP RGD PMID:28834365 RGD:14995504 NCBI chr10:56,186,299...56,198,449
Ensembl chr10:56,187,020...56,198,449
JBrowse link
short sperm flagellum term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tmem67 transmembrane protein 67 IAGP RGD PMID:19515853 RGD:8554306 NCBI chr 5:25,666,138...25,721,056
Ensembl chr 5:25,666,137...25,721,072
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  mammalian phenotype 4987
    cellular phenotype 75
      abnormal cell morphology 14
        abnormal germ cell morphology 6
          abnormal female germ cell morphology + 2
          abnormal gametes + 5
          abnormal male germ cell morphology + 4
          abnormal primordial germ cell morphology + 0
          decreased germ cell number + 5
Path 2
Term Annotations click to browse term
  mammalian phenotype 4987
    reproductive system phenotype 86
      abnormal reproductive system morphology 62
        abnormal gametogenesis 11
          abnormal germ cell morphology 6
            abnormal female germ cell morphology + 2
            abnormal gametes + 5
            abnormal male germ cell morphology + 4
            abnormal primordial germ cell morphology + 0
            decreased germ cell number + 5
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.