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ONTOLOGY REPORT - ANNOTATIONS


Term:abnormal dorsal striatum morphology
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Accession:MP:0004102 term browser browse the term
Definition:any structural anomaly of the regions of the caudate nucleus and the putamen that lie dorsal to the anterior commissure
Synonyms:exact_synonym: abnormal caudate putamen complex;   abnormal caudate-putamen morphology;   abnormal caudatoputamen morphology;   abnormal dorsal basal ganglia


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abnormal dorsal striatum morphology term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ercc6 excision repair cross-complementing rodent repair deficiency, complementation group 6 JBrowse link 14 32,513,291 32,580,990 RGD:5509061
G Gdnf glial cell line derived neurotrophic factor JBrowse link 15 7,810,048 7,837,580 RGD:5509061
G Gt(ROSA)26Sor gene trap ROSA 26, Philippe Soriano JBrowse link 6 113,067,428 113,077,244 RGD:5509061
G Htt huntingtin JBrowse link 5 34,761,721 34,912,534 RGD:5509061
G Ireb2 iron responsive element binding protein 2 JBrowse link 9 54,862,658 54,912,534 RGD:5509061
G Jakmip1 janus kinase and microtubule interacting protein 1 JBrowse link 5 37,025,852 37,150,614 RGD:5509061
G Lhx8 LIM homeobox protein 8 JBrowse link 3 154,306,288 154,330,560 RGD:5509061
G Lynx1 Ly6/neurotoxin 1 JBrowse link 15 74,747,856 74,752,979 RGD:5509061
G Mfn2 mitofusin 2 JBrowse link 4 147,873,586 147,904,909 RGD:5509061
G Pitx3 paired-like homeodomain transcription factor 3 JBrowse link 19 46,135,281 46,148,325 RGD:5509061
G Ppm1l protein phosphatase 1 (formerly 2C)-like JBrowse link 3 69,316,918 69,560,798 RGD:5509061
G Slc6a3 solute carrier family 6 (neurotransmitter transporter, dopamine), member 3 JBrowse link 13 73,536,128 73,578,672 RGD:5509061
G Tor1a torsin family 1, member A (torsin A) JBrowse link 2 30,960,561 30,967,918 RGD:5509061
G Trim67 tripartite motif-containing 67 JBrowse link 8 124,791,317 124,834,713 RGD:5509061
G Vangl2 VANGL planar cell polarity 2 JBrowse link 1 172,000,960 172,027,318 RGD:5509061
G Wasl WASP like actin nucleation promoting factor JBrowse link 6 24,613,810 24,664,995 RGD:5509061
G Xpa xeroderma pigmentosum, complementation group A JBrowse link 4 46,175,220 46,196,344 RGD:5509061
G Zfp597 zinc finger protein 597 JBrowse link 16 3,861,544 3,884,377 RGD:5509061
abnormal putamen morphology term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hsf1 heat shock factor 1 JBrowse link 15 76,477,362 76,501,155 RGD:5509061
G Pdha1 pyruvate dehydrogenase E1 alpha 1 JBrowse link X 160,122,219 160,138,430 RGD:5509061
G Tubb5 tubulin, beta 5 class I JBrowse link 17 35,833,920 35,838,301 RGD:5509061

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Term Annotations click to browse term
  mammalian phenotype 14688
    nervous system phenotype 4057
      abnormal nervous system morphology 3222
        abnormal brain morphology 1989
          abnormal forebrain morphology 1222
            abnormal basal ganglion morphology 147
              abnormal striatum morphology 105
                abnormal dorsal striatum morphology 21
                  abnormal caudate nucleus morphology + 0
                  abnormal dorsal striatum average cell area + 0
                  abnormal dorsal striatum cell density + 0
                  abnormal dorsal striatum cell number + 0
                  abnormal dorsal striatum total cell area + 0
                  abnormal putamen morphology 3
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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.