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ONTOLOGY REPORT - ANNOTATIONS


Term:transport pathway
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Accession:PW:0000103 term browser browse the term
Definition:A pathway that mediates or facilitates the movement of biochemical material, organic and inorganic substances and/or drugs.


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transport pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abca3 ATP binding cassette subfamily A member 3 JBrowse link 10 13,723,365 13,780,558 RGD:1549859
G Abca5 ATP binding cassette subfamily A member 5 JBrowse link 10 98,573,226 98,645,028 RGD:1549860
alpha-helical insertion pathway of mitochondrial protein import term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Tomm70 translocase of outer mitochondrial membrane 70 JBrowse link 11 45,477,053 45,511,409 RGD:10412658
altered insulin responsive facilitative sugar transporter mediated glucose transport pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Akt2 AKT serine/threonine kinase 2 JBrowse link 1 84,400,939 84,451,223 RGD:7248543
G Tbc1d4 TBC1 domain family, member 4 JBrowse link 15 85,927,978 86,105,829 RGD:7248544
altered reverse cholesterol transport pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abca1 ATP binding cassette subfamily A member 1 JBrowse link 5 69,857,717 69,983,042 RGD:1600951
beta-barrel pathway of mitochondrial protein import term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mtx1 Metaxin 1 JBrowse link 2 188,522,605 188,528,747 RGD:10412662
G Mtx2 metaxin 2 JBrowse link 3 61,756,109 61,818,999 RGD:10412662
G Samm50 SAMM50 sorting and assembly machinery component JBrowse link 7 125,058,966 125,082,506 RGD:10412662
G Timm10 translocase of inner mitochondrial membrane 10 JBrowse link 3 72,226,563 72,230,087 RGD:10412662
G Timm13 translocase of inner mitochondrial membrane 13 JBrowse link 7 11,677,340 11,678,443 RGD:10412662
G Timm8a1 translocase of inner mitochondrial membrane 8A1 JBrowse link X 105,351,714 105,355,722 RGD:10412662
G Timm8b translocase of inner mitochondrial membrane 8 homolog B JBrowse link 8 55,037,750 55,039,130 RGD:10412662
G Timm9 translocase of inner mitochondrial membrane 9 JBrowse link 6 93,549,484 93,562,314 RGD:10412662
G Tomm20 translocase of outer mitochondrial membrane 20 JBrowse link 19 59,863,421 59,873,411 RGD:10412662
G Tomm22 translocase of outer mitochondrial membrane 22 JBrowse link 7 120,901,934 120,903,684 RGD:10412662
G Tomm40 translocase of outer mitochondrial membrane 40 JBrowse link 1 80,617,749 80,630,253 RGD:10412662
G Tomm5 translocase of outer mitochondrial membrane 5 JBrowse link 5 60,655,708 60,658,568 RGD:10412662
G Tomm6 translocase of outer mitochondrial membrane 6 JBrowse link 9 15,313,346 15,314,872 RGD:10412662
G Tomm7 translocase of outer mitochondrial membrane 7 JBrowse link 4 7,835,949 7,842,790 RGD:10412662
G Tomm70 translocase of outer mitochondrial membrane 70 JBrowse link 11 45,477,053 45,511,409 RGD:10412662
bile acid transport pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abcb11 ATP binding cassette subfamily B member 11 JBrowse link 3 55,480,024 55,587,946 RGD:6907045
G Abcb1a ATP binding cassette subfamily B member 1A JBrowse link 4 22,339,829 22,517,642 RGD:6907045
G Abcb1b ATP-binding cassette, subfamily B (MDR/TAP), member 1B JBrowse link 4 22,225,123 22,307,577 RGD:6907045
G Abcb4 ATP binding cassette subfamily B member 4 JBrowse link 4 22,133,984 22,192,687 RGD:6907045
G Abcc2 ATP binding cassette subfamily C member 2 JBrowse link 1 263,554,426 263,612,556 RGD:6907045
G Abcc3 ATP binding cassette subfamily C member 3 JBrowse link 10 82,047,308 82,116,928 RGD:6907045
G Abcc4 ATP binding cassette subfamily C member 4 JBrowse link 15 103,695,415 103,927,980 RGD:6907045
G Abcg2 ATP binding cassette subfamily G member 2 JBrowse link 4 88,765,441 88,890,268 RGD:6907045
G Abcg5 ATP binding cassette subfamily G member 5 JBrowse link 6 7,935,771 7,961,207 RGD:6907045
G Abcg8 ATP binding cassette subfamily G member 8 JBrowse link 6 7,961,413 7,980,708 RGD:6907045
G Adcy1 adenylate cyclase 1 JBrowse link 14 87,311,970 87,429,880 RGD:6907045
G Adcy2 adenylate cyclase 2 JBrowse link 1 37,043,071 37,698,390 RGD:6907045
G Adcy3 adenylate cyclase 3 JBrowse link 6 28,570,941 28,648,848 RGD:6907045
G Adcy4 adenylate cyclase 4 JBrowse link 15 34,453,917 34,469,779 RGD:6907045
G Adcy5 adenylate cyclase 5 JBrowse link 11 68,695,839 68,842,452 RGD:6907045
G Adcy6 adenylate cyclase 6 JBrowse link 7 140,270,678 140,291,722 RGD:6907045
G Adcy7 adenylate cyclase 7 JBrowse link 19 19,702,307 19,762,973 RGD:6907045
G Adcy8 adenylate cyclase 8 JBrowse link 7 105,353,883 105,593,372 RGD:6907045
G Adcy9 adenylate cyclase 9 JBrowse link 10 11,392,698 11,515,406 RGD:6907045
G Aqp1 aquaporin 1 JBrowse link 4 85,551,503 85,563,683 RGD:6907045
G Aqp4 aquaporin 4 JBrowse link 18 6,766,009 6,782,757 RGD:6907045
G Aqp8 aquaporin 8 JBrowse link 1 193,424,818 193,430,665 RGD:6907045
G Aqp9 aquaporin 9 JBrowse link 8 77,559,621 77,599,781 RGD:6907045
G Atp1a1 ATPase Na+/K+ transporting subunit alpha 1 JBrowse link 2 204,003,742 204,032,023 RGD:6907045
G Atp1a2 ATPase Na+/K+ transporting subunit alpha 2 JBrowse link 13 90,651,682 90,676,629 RGD:6907045
G Atp1a3 ATPase Na+/K+ transporting subunit alpha 3 JBrowse link 1 81,852,423 81,881,565 RGD:6907045
G Atp1a4 ATPase Na+/K+ transporting subunit alpha 4 JBrowse link 13 90,605,792 90,642,032 RGD:6907045
G Atp1b1 ATPase Na+/K+ transporting subunit beta 1 JBrowse link 13 82,737,161 82,757,681 RGD:6907045
G Atp1b2 ATPase Na+/K+ transporting subunit beta 2 JBrowse link 10 56,205,622 56,211,879 RGD:6907045
G Atp1b3 ATPase Na+/K+ transporting subunit beta 3 JBrowse link 8 104,190,032 104,221,342 RGD:6907045
G Atp1b4 ATPase Na+/K+ transporting family member beta 4 JBrowse link X 124,631,544 124,652,520 RGD:6907045
G Baat bile acid CoA:amino acid N-acyltransferase JBrowse link 5 64,768,397 64,777,368 RGD:6907045
G Cftr CF transmembrane conductance regulator JBrowse link 4 42,693,263 42,860,679 RGD:6907045
G Cyp7a1 cytochrome P450 family 7 subfamily A member 1 JBrowse link 5 19,358,734 19,368,431 RGD:6907045
G Ephx1 epoxide hydrolase 1 JBrowse link 13 99,271,390 99,300,580 RGD:6907045
G Fxyd2 FXYD domain-containing ion transport regulator 2 JBrowse link 8 49,710,334 49,717,492 RGD:6907045
G Gnas GNAS complex locus JBrowse link 3 172,374,957 172,434,988 RGD:6907045
G Hmgcr 3-hydroxy-3-methylglutaryl-CoA reductase JBrowse link 2 27,480,224 27,500,654 RGD:6907045
G Kcnn2 potassium calcium-activated channel subfamily N member 2 JBrowse link 18 39,331,894 39,479,574 RGD:6907045
G Ldlr low density lipoprotein receptor JBrowse link 8 22,750,425 22,773,305 RGD:6907045
G Nr0b2 nuclear receptor subfamily 0, group B, member 2 JBrowse link 5 151,776,004 151,779,319 RGD:6907045
G Nr1h4 nuclear receptor subfamily 1, group H, member 4 JBrowse link 7 30,003,429 30,162,095 RGD:6907045
G Prkaca protein kinase cAMP-activated catalytic subunit alpha JBrowse link 19 25,095,089 25,118,869 RGD:6907045
G Prkacb protein kinase cAMP-activated catalytic subunit beta JBrowse link 2 252,602,197 252,691,886 RGD:6907045
G Prkx protein kinase, X-linked JBrowse link X 45,080,963 45,125,095 RGD:6907045
G Rxra retinoid X receptor alpha JBrowse link 3 6,272,560 6,295,354 RGD:6907045
G Scarb1 scavenger receptor class B, member 1 JBrowse link 12 36,694,952 36,761,445 RGD:6907045
G Sctr secretin receptor JBrowse link 13 36,039,241 36,090,515 RGD:6907045
G Slc10a1 solute carrier family 10 member 1 JBrowse link 6 104,617,730 104,631,355 RGD:6907045
G Slc10a2 solute carrier family 10 member 2 JBrowse link 16 90,324,420 90,350,254 RGD:6907045
G Slc22a1 solute carrier family 22 member 1 JBrowse link 1 48,273,639 48,300,645 RGD:6907045
G Slc22a7 solute carrier family 22 member 7 JBrowse link 9 16,925,321 16,931,119 RGD:6907045
G Slc22a8 solute carrier family 22 member 8 JBrowse link 1 224,799,444 224,818,482 RGD:6907045
G Slc27a5 solute carrier family 27 member 5 JBrowse link 1 65,576,599 65,587,192 RGD:6907045
G Slc2a1 solute carrier family 2 member 1 JBrowse link 5 138,154,677 138,182,897 RGD:6907045
G Slc4a2 solute carrier family 4 member 2 JBrowse link 4 7,264,677 7,282,355 RGD:6907045
G Slc4a4 solute carrier family 4 member 4 JBrowse link 14 20,476,258 20,817,042 RGD:6907045
G Slc4a5 solute carrier family 4 member 5 JBrowse link 4 114,918,488 115,002,290 RGD:6907045
G Slc5a1 solute carrier family 5 member 1 JBrowse link 14 82,910,448 82,975,303 RGD:6907045
G Slc9a1 solute carrier family 9 member A1 JBrowse link 5 151,573,122 151,626,360 RGD:6907045
G Slc9a3 solute carrier family 9 member A3 JBrowse link 1 31,731,652 31,777,144 RGD:6907045
G Slco1a3 solute carrier organic anion transporter family member 1A3 JBrowse link 4 176,255,603 176,299,119 RGD:6907045
G Slco1a4 solute carrier organic anion transporter family, member 1a4 JBrowse link 4 175,969,549 176,026,227 RGD:6907045
G Slco1a6 solute carrier organic anion transporter family, member 1a6 JBrowse link 4 176,345,671 176,390,729 RGD:6907045
G Slco1b2 solute carrier organic anion transporter family member 1B2 JBrowse link 4 175,814,118 175,881,775 RGD:6907045
G Sult2a1 sulfotransferase family 2A member 1 JBrowse link 1 76,558,721 76,614,315 RGD:6907045
calcium transport pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atp2a1 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 JBrowse link 1 197,855,912 197,875,038 RGD:7204695
G Atp2a2 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2 JBrowse link 12 39,553,903 39,603,326 RGD:7204695
G Atp2a3 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3 JBrowse link 10 59,528,849 59,560,440 RGD:7204695
G Atp2b1 ATPase plasma membrane Ca2+ transporting 1 JBrowse link 7 41,114,606 41,223,138 RGD:7204695
G Atp2b2 ATPase plasma membrane Ca2+ transporting 2 JBrowse link 4 145,704,779 145,948,997 RGD:7204695
G Atp2b3 ATPase plasma membrane Ca2+ transporting 3 JBrowse link X 157,236,400 157,312,028 RGD:7204695
G Atp2b4 ATPase plasma membrane Ca2+ transporting 4 JBrowse link 13 50,091,644 50,153,808 RGD:7204695
G Atp2c1 ATPase secretory pathway Ca2+ transporting 1 JBrowse link 8 113,953,959 114,039,965 RGD:7204695
G Atp2c2 ATPase secretory pathway Ca2+ transporting 2 JBrowse link 19 52,347,480 52,404,608 RGD:7204695
G Cacna1a calcium voltage-gated channel subunit alpha1 A JBrowse link 19 25,453,236 25,749,550 RGD:7204688
G Cacna1b calcium voltage-gated channel subunit alpha1 B JBrowse link 3 1,740,026 1,924,959 RGD:7204688
G Cacna1c calcium voltage-gated channel subunit alpha1 C JBrowse link 4 150,635,808 151,270,790 RGD:7204688
G Cacna1d calcium voltage-gated channel subunit alpha1 D JBrowse link 16 6,110,294 6,405,022 RGD:7204688
G Cacna1e calcium voltage-gated channel subunit alpha1 E JBrowse link 13 71,899,445 72,534,992 RGD:7204688
G Cacna1f calcium voltage-gated channel subunit alpha1 F JBrowse link X 15,712,709 15,741,135 RGD:7204688
G Cacna1g calcium voltage-gated channel subunit alpha1 G JBrowse link 10 82,129,071 82,197,828 RGD:7204688
G Cacna1h calcium voltage-gated channel subunit alpha1 H JBrowse link 10 14,730,932 14,789,201 RGD:7204688
G Cacna1i calcium voltage-gated channel subunit alpha1 I JBrowse link 7 121,521,787 121,619,300 RGD:7204688
G Cacna1s calcium voltage-gated channel subunit alpha1 S JBrowse link 13 52,889,570 52,964,558 RGD:7204688
G Cacnb1 calcium voltage-gated channel auxiliary subunit beta 1 JBrowse link 10 85,954,138 85,974,764 RGD:7204688
G Cacnb2 calcium voltage-gated channel auxiliary subunit beta 2 JBrowse link 17 81,673,862 82,019,219 RGD:7204688
G Cacnb3 calcium voltage-gated channel auxiliary subunit beta 3 JBrowse link 7 140,311,120 140,324,902 RGD:7204688
G Cacnb4 calcium voltage-gated channel auxiliary subunit beta 4 JBrowse link 3 37,950,846 38,211,478 RGD:7204688
G Cnga1 cyclic nucleotide gated channel subunit alpha 1 JBrowse link 14 38,155,771 38,171,107 RGD:6893549
G Cnga2 cyclic nucleotide gated channel subunit alpha 2 JBrowse link 16 69,878,513 69,899,075 RGD:6893549
G Cnga3 cyclic nucleotide gated channel subunit alpha 3 JBrowse link 9 43,807,412 43,858,225 RGD:6893549
G Cnga4 cyclic nucleotide gated channel subunit alpha 4 JBrowse link 1 170,238,959 170,246,858 RGD:6893549
G Cngb1 cyclic nucleotide gated channel subunit beta 1 JBrowse link 19 10,142,440 10,206,618 RGD:6893549
G Cngb3 cyclic nucleotide gated channel subunit beta 3 JBrowse link 5 33,097,353 33,507,467 RGD:6893549
G Itpr1 inositol 1,4,5-trisphosphate receptor, type 1 JBrowse link 4 140,247,297 140,580,749 RGD:7204693
G Itpr2 inositol 1,4,5-trisphosphate receptor, type 2 JBrowse link 4 180,423,452 180,800,088 RGD:7204693
G Itpr3 inositol 1,4,5-trisphosphate receptor, type 3 JBrowse link 20 5,645,894 5,711,702 RGD:7204693
G Mcoln1 mucolipin 1 JBrowse link 12 2,054,629 2,068,682 RGD:7204689
G Mcu mitochondrial calcium uniporter JBrowse link 20 29,037,452 29,199,224 RGD:7204696
G Orai1 ORAI calcium release-activated calcium modulator 1 JBrowse link 12 38,981,903 38,995,570 RGD:7204692
G Orai2 ORAI calcium release-activated calcium modulator 2 JBrowse link 12 23,544,483 23,564,602 RGD:7204692
G Orai3 ORAI calcium release-activated calcium modulator 3 JBrowse link 1 199,217,504 199,222,363 RGD:7204692
G Ryr1 ryanodine receptor 1 JBrowse link 1 87,959,596 88,066,252 RGD:7204694
G Ryr2 ryanodine receptor 2 JBrowse link 17 65,533,998 65,955,606 RGD:7204694
G Ryr3 ryanodine receptor 3 JBrowse link 3 104,117,307 104,665,151 RGD:7204694
G Slc24a1 solute carrier family 24 member 1 JBrowse link 8 70,409,683 70,438,352 RGD:7204698
G Slc24a2 solute carrier family 24 member 2 JBrowse link 5 105,336,287 105,579,959 RGD:7204698
G Slc24a3 solute carrier family 24 member 3 JBrowse link 3 139,333,942 139,835,728 RGD:7204698
G Slc24a4 solute carrier family 24 member 4 JBrowse link 6 126,015,799 126,158,727 RGD:7204698
G Slc8a1 solute carrier family 8 member A1 JBrowse link 6 4,244,076 4,564,262 RGD:7204698
G Slc8a2 solute carrier family 8 member A2 JBrowse link 1 78,029,555 78,054,042 RGD:7204698
G Slc8a3 solute carrier family 8 member A3 JBrowse link 6 104,889,500 105,099,408 RGD:7204698
G Slc8b1 solute carrier family 8 member B1 JBrowse link 12 41,566,980 41,590,294 RGD:7204696
G Stim1 stromal interaction molecule 1 JBrowse link 1 167,373,894 167,533,412 RGD:7204692
G Stim2 stromal interaction molecule 2 JBrowse link 14 59,198,180 59,323,947 RGD:7204692
G Tpcn1 two pore segment channel 1 JBrowse link 12 41,507,784 41,566,847 RGD:7204697
G Tpcn2 two pore segment channel 2 JBrowse link 1 218,419,182 218,448,902 RGD:7204697
G Trpv5 transient receptor potential cation channel, subfamily V, member 5 JBrowse link 4 70,947,615 70,974,004 RGD:7204689
G Trpv6 transient receptor potential cation channel, subfamily V, member 6 JBrowse link 4 70,918,631 70,934,291 RGD:7204689
carrier pathway of mitochondrial protein import. term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Timm10 translocase of inner mitochondrial membrane 10 JBrowse link 3 72,226,563 72,230,087 RGD:10412667
G Timm10b translocase of inner mitochondrial membrane 10B JBrowse link 1 170,471,265 170,474,111 RGD:10412667
G Timm22 translocase of inner mitochondrial membrane 22 JBrowse link 10 64,556,064 64,563,822 RGD:10412667
G Timm9 translocase of inner mitochondrial membrane 9 JBrowse link 6 93,549,484 93,562,314 RGD:10412667
G Tomm20 translocase of outer mitochondrial membrane 20 JBrowse link 19 59,863,421 59,873,411 RGD:10412661
G Tomm22 translocase of outer mitochondrial membrane 22 JBrowse link 7 120,901,934 120,903,684 RGD:10412661
G Tomm40 translocase of outer mitochondrial membrane 40 JBrowse link 1 80,617,749 80,630,253 RGD:10412661
G Tomm5 translocase of outer mitochondrial membrane 5 JBrowse link 5 60,655,708 60,658,568 RGD:10412661
G Tomm6 translocase of outer mitochondrial membrane 6 JBrowse link 9 15,313,346 15,314,872 RGD:10412661
G Tomm7 translocase of outer mitochondrial membrane 7 JBrowse link 4 7,835,949 7,842,790 RGD:10412661
G Tomm70 translocase of outer mitochondrial membrane 70 JBrowse link 11 45,477,053 45,511,409 RGD:10412661
CRM1 export pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Anp32a acidic nuclear phosphoprotein 32 family member A JBrowse link 8 67,295,578 67,333,075 RGD:9743967
G Anp32b acidic nuclear phosphoprotein 32 family member B JBrowse link 5 62,070,709 62,094,633 RGD:9743967
G Eif4e eukaryotic translation initiation factor 4E JBrowse link 2 243,819,616 243,853,987 RGD:9743967
G Elavl1 ELAV like RNA binding protein 1 JBrowse link 12 2,461,502 2,502,432 RGD:9743967
G Lrpprc leucine-rich pentatricopeptide repeat containing JBrowse link 6 7,984,043 8,066,874 RGD:9743967
G Nup98 nucleoporin 98 and 96 precursor JBrowse link 1 167,213,866 167,308,851 RGD:9743967
G Nxf3 nuclear RNA export factor 3 JBrowse link X 106,562,957 106,587,487 RGD:9743967
G Ran RAN, member RAS oncogene family JBrowse link 12 31,319,556 31,324,105 RGD:9743967
G Ranbp1 RAN binding protein 1 JBrowse link 11 86,890,585 86,898,818 RGD:9743967
G Ranbp2 RAN binding protein 2 JBrowse link 20
20
28,027,054
28,365,538
28,076,664
28,375,676
RGD:9743967
G Rangap1 RAN GTPase activating protein 1 JBrowse link 7 122,939,266 122,967,178 RGD:9743967
G Xpo1 exportin 1 JBrowse link 14 108,007,421 108,049,088 RGD:9743967
facilitative sugar transporter mediated glucose transport pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Slc2a1 solute carrier family 2 member 1 JBrowse link 5 138,154,677 138,182,897 RGD:1626159
RGD:2303167
RGD:1625539
G Slc2a2 solute carrier family 2 member 2 JBrowse link 2 114,413,427 114,445,418 RGD:1626159
G Slc2a3 solute carrier family 2 member 3 JBrowse link 4 155,549,991 155,626,018 RGD:1626159
RGD:1642813
RGD:1625539
G Slc2a4 solute carrier family 2 member 4 JBrowse link 10 56,552,921 56,558,562 RGD:1626159
RGD:1625539
insulin responsive facilitative sugar transporter mediated glucose transport pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Actr2 actin related protein 2 JBrowse link 14 104,338,486 104,375,840 RGD:10054052
G Actr3 actin related protein 3 JBrowse link 13 41,695,520 41,738,622 RGD:10054052
G Akt1 AKT serine/threonine kinase 1 JBrowse link 6 137,218,398 137,239,970 RGD:2306432
RGD:6484113
G Akt2 AKT serine/threonine kinase 2 JBrowse link 1 84,400,939 84,451,223 RGD:2302395
RGD:6484113
RGD:2306432
RGD:2302397
G Arpc1a actin related protein 2/3 complex, subunit 1A JBrowse link 12 11,272,609 11,294,084 RGD:10054052
G Arpc1b actin related protein 2/3 complex, subunit 1B JBrowse link 12 11,252,300 11,265,849 RGD:10054052
G Arpc2 actin related protein 2/3 complex, subunit 2 JBrowse link 9 81,518,163 81,548,871 RGD:10054052
G Arpc3 actin related protein 2/3 complex, subunit 3 JBrowse link 12 39,653,951 39,667,817 RGD:10054052
G Arpc4 actin related protein 2/3 complex, subunit 4 JBrowse link 4 145,330,457 145,340,985 RGD:10054052
G Arpc5 actin related protein 2/3 complex, subunit 5 JBrowse link 13 70,174,970 70,183,879 RGD:10054052
G Asip agouti signaling protein JBrowse link 3 150,492,010 150,579,870 RGD:6484113
G Baiap2 BAR/IMD domain containing adaptor protein 2 JBrowse link 10 109,107,326 109,187,458 RGD:10053654
G Calm1 calmodulin 1 JBrowse link 6 124,217,241 124,225,292 RGD:6484113
G Calm2 calmodulin 2 JBrowse link 6 11,067,675 11,080,078 RGD:6484113
G Calm3 calmodulin 3 JBrowse link 1 78,844,520 78,851,628 RGD:6484113
G Cbl Cbl proto-oncogene JBrowse link 8 48,481,256 48,564,775 RGD:10053654
G Cfl1 cofilin 1 JBrowse link 1 220,869,805 220,873,337 RGD:10054052
G Crk CRK proto-oncogene, adaptor protein JBrowse link 10 63,829,731 63,855,999 RGD:10053654
G Cyfip1 cytoplasmic FMR1 interacting protein 1 JBrowse link 1 114,258,773 114,347,138 RGD:10053654
G Dennd1c DENN domain containing 1C JBrowse link 9 9,976,015 9,982,349 RGD:10053653
G Dennd4a DENN domain containing 4A JBrowse link 8 70,293,355 70,406,675 RGD:10053653
G Dennd4b DENN domain containing 4B JBrowse link 2 189,626,922 189,642,732 RGD:10053653
G Dennd4c DENN domain containing 4C JBrowse link 5 105,100,081 105,195,634 RGD:10053653
G Gsk3b glycogen synthase kinase 3 beta JBrowse link 11 65,060,884 65,208,842 RGD:6484113
G Gys1 glycogen synthase 1 JBrowse link 1 101,427,195 101,447,092 RGD:6484113
G Ins2 insulin 2 JBrowse link 1 215,856,967 215,858,034 RGD:6484113
G Insr insulin receptor JBrowse link 12 1,682,527 1,816,414 RGD:6484113
G Iqgap1 IQ motif containing GTPase activating protein 1 JBrowse link 1 142,525,041 142,615,673 RGD:10053654
G Kif3a kinesin family member 3a JBrowse link 10 38,918,705 38,953,958 RGD:10053654
G Kif5b kinesin family member 5B JBrowse link 17 54,181,416 54,219,048 RGD:10053654
G Limk1 LIM domain kinase 1 JBrowse link 12 25,036,630 25,070,538 RGD:10054052
G Lnpep leucyl and cystinyl aminopeptidase JBrowse link 1 59,289,392 59,384,540 RGD:2302393
RGD:6484113
RGD:2306436
G Myo1c myosin 1C JBrowse link 10 63,803,311 63,819,614 RGD:10053654
G Myo5a myosin VA JBrowse link 8 82,038,966 82,156,507 RGD:2302397
RGD:10053654
G Myo5b myosin Vb JBrowse link 18 70,426,865 70,729,985 RGD:10053654
G Pak1 p21 (RAC1) activated kinase 1 JBrowse link 1 162,768,156 162,883,356 RGD:10053654
G Plekhg4 pleckstrin homology and RhoGEF domain containing G4 JBrowse link 19 37,327,395 37,345,047 RGD:10053654
G Ppp1cc protein phosphatase 1 catalytic subunit gamma JBrowse link 12 39,864,302 39,882,030 RGD:6484113
G Ppp1r3a protein phosphatase 1, regulatory subunit 3A JBrowse link 4 41,171,486 41,212,116 RGD:6484113
G Prex1 phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1 JBrowse link 3 163,329,580 163,477,822 RGD:10053654
G Prkci protein kinase C, iota JBrowse link 2 115,941,998 116,002,550 RGD:6484113
G Prkcz protein kinase C, zeta JBrowse link 5 172,658,071 172,769,492 RGD:6484113
G Rab10 RAB10, member RAS oncogene family JBrowse link 6 27,668,387 27,721,120 RGD:2302393
RGD:10053653
RGD:2302397
RGD:2302395
G Rab11a RAB11a, member RAS oncogene family JBrowse link 8 70,192,975 70,215,719 RGD:2302395
RGD:2302397
G Rab13 RAB13, member RAS oncogene family JBrowse link 2 189,581,209 189,586,358 RGD:10053653
G Rab14 RAB14, member RAS oncogene family JBrowse link 3 14,373,270 14,395,357 RGD:2302393
RGD:2306295
RGD:2302397
RGD:2302395
G Rab2a RAB2A, member RAS oncogene family JBrowse link 5 21,632,654 21,696,721 RGD:2302393
RGD:2302397
RGD:2302395
G Rab3ip RAB3A interacting protein JBrowse link 7 59,927,486 59,971,518 RGD:10053653
G Rab4a RAB4A, member RAS oncogene family JBrowse link 19 56,585,598 56,613,078 RGD:2302395
RGD:2306268
RGD:2302397
G Rab5a RAB5A, member RAS oncogene family JBrowse link 9 5,910 6,065 RGD:2302395
G Rab8a RAB8A, member RAS oncogene family JBrowse link 16 19,355,047 19,376,776 RGD:2302393
RGD:2306295
RGD:2302397
RGD:2302395
G Rab8b RAB8B, member RAS oncogene family JBrowse link 8 72,641,680 72,714,646 RGD:2302397
G Rac1 Rac family small GTPase 1 JBrowse link 12 13,090,316 13,111,841 RGD:10053654
G Rapgef1 Rap guanine nucleotide exchange factor 1 JBrowse link 3 8,189,594 8,307,077 RGD:10053654
G Rhoq ras homolog family member Q JBrowse link 6 10,533,151 10,568,582 RGD:6484113
RGD:10053654
G Sfn stratifin JBrowse link 5 151,823,422 151,824,937 RGD:6484113
G Slc2a4 solute carrier family 2 member 4 JBrowse link 10 56,552,921 56,558,562 RGD:2302393
RGD:6484113
RGD:2306268
RGD:2303167
RGD:2302397
RGD:2302395
G Snap23 synaptosome associated protein 23 JBrowse link 3 112,333,972 112,362,960 RGD:2302393
RGD:2302397
G Sorbs1 sorbin and SH3 domain containing 1 JBrowse link 1 259,373,921 259,502,108 RGD:10053654
G Ssh1 slingshot protein phosphatase 1 JBrowse link 12 48,403,184 48,447,964 RGD:10054052
G Stx4 syntaxin 4 JBrowse link 1 199,287,384 199,295,606 RGD:2302393
RGD:6484113
RGD:2302397
G Stxbp3 syntaxin binding protein 3 JBrowse link 2 211,595,763 211,638,756 RGD:2302393
RGD:2302397
G Stxbp4 syntaxin binding protein 4 JBrowse link 10 78,005,745 78,168,641 RGD:2302395
RGD:6484113
G Tbc1d1 TBC1 domain family member 1 JBrowse link 14 45,598,753 45,797,650 RGD:10053653
G Tbc1d4 TBC1 domain family, member 4 JBrowse link 15 85,927,978 86,105,829 RGD:2302393
G Tiam1 TIAM Rac1 associated GEF 1 JBrowse link 11 29,931,083 30,061,173 RGD:10053654
G Trip10 thyroid hormone receptor interactor 10 JBrowse link 9 9,689,214 9,702,353 RGD:6484113
G Vamp2 vesicle-associated membrane protein 2 JBrowse link 10 55,675,171 55,679,405 RGD:2302393
RGD:6484113
RGD:2302397
G Ywhab tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta JBrowse link 3 160,391,108 160,399,931 RGD:6484113
G Ywhae tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon JBrowse link 10 63,884,338 63,921,709 RGD:6484113
G Ywhag tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma JBrowse link 12 23,789,547 23,817,884 RGD:6484113
G Ywhah tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta JBrowse link 14 83,053,041 83,062,424 RGD:6484113
G Ywhaq tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta JBrowse link 6 43,463,294 43,493,816 RGD:6484113
G Ywhaz tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta JBrowse link 7 75,573,553 75,598,295 RGD:6484113
intermembrane space assembly pathway of mitochondrial protein import term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Chchd4 coiled-coil-helix-coiled-coil-helix domain containing 4 JBrowse link 4 123,108,924 123,118,186 RGD:10412663
G Gfer growth factor, augmenter of liver regeneration JBrowse link 10 14,059,347 14,061,703 RGD:10412663
G Tomm40 translocase of outer mitochondrial membrane 40 JBrowse link 1 80,617,749 80,630,253 RGD:10412658
iron efflux pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cp ceruloplasmin JBrowse link 2 104,744,249 104,803,034 RGD:11534369
G Hamp hepcidin antimicrobial peptide JBrowse link 1 89,368,021 89,369,960 RGD:11534369
G Heph hephaestin JBrowse link X 65,377,313 65,658,479 RGD:11534369
G Slc40a1 solute carrier family 40 member 1 JBrowse link 9 52,819,451 52,830,461 RGD:11534369
iron uptake pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cybrd1 cytochrome b reductase 1 JBrowse link 3 57,718,496 57,745,749 RGD:11554199
G Prnp prion protein JBrowse link 3 124,515,917 124,531,320 RGD:11556274
G Slc11a2 solute carrier family 11 member 2 JBrowse link 7 142,025,812 142,062,892 RGD:11554199
G Slc25a28 solute carrier family 25 member 28 JBrowse link 1 263,420,039 263,431,312 RGD:11554199
G Slc25a37 solute carrier family 25 member 37 JBrowse link 15 51,125,764 51,168,384 RGD:11554199
G Slc39a14 solute carrier family 39 member 14 JBrowse link 15 51,982,872 52,029,841 RGD:11554199
RGD:11556274
G Slc39a8 solute carrier family 39 member 8 JBrowse link 2 241,028,851 241,092,584 RGD:11554199
RGD:11556274
G Steap3 STEAP3 metalloreductase JBrowse link 13 36,257,220 36,274,144 RGD:11554199
G Tf transferrin JBrowse link 8 111,694,570 111,721,275 RGD:11554199
G Tfrc transferrin receptor JBrowse link 11 71,397,423 71,419,263 RGD:11554199
mitochondria transport pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Actb actin, beta JBrowse link 12 13,715,843 13,718,813 RGD:10402155
G Actr10 actin related protein 10 JBrowse link 6 93,385,457 93,411,605 RGD:10402155
G Actr1a actin related protein 1A JBrowse link 1 266,123,864 266,142,621 RGD:10402155
G Capza1 capping actin protein of muscle Z-line subunit alpha 1 JBrowse link 2 207,305,748 207,350,812 RGD:10402155
G Dctn1 dynactin subunit 1 JBrowse link 4 114,876,770 114,896,567 RGD:10402141
RGD:10402155
G Dctn2 dynactin subunit 2 JBrowse link 7 70,555,953 70,571,433 RGD:10402155
G Dctn3 dynactin subunit 3 JBrowse link 5 58,098,706 58,106,706 RGD:10402155
G Dctn4 dynactin subunit 4 JBrowse link 18 55,797,188 55,824,195 RGD:10402155
G Dctn5 dynactin subunit 5 JBrowse link 1 192,088,709 192,105,421 RGD:10402155
G Dctn6 dynactin subunit 6 JBrowse link 16 61,795,544 61,814,734 RGD:10402155
G Dync1h1 dynein cytoplasmic 1 heavy chain 1 JBrowse link 6 134,958,854 135,085,769 RGD:10402141
RGD:10402142
G Dync1i1 dynein cytoplasmic 1 intermediate chain 1 JBrowse link 4 30,807,755 31,121,097 RGD:10402142
G Dync1i2 dynein cytoplasmic 1 intermediate chain 2 JBrowse link 3 57,817,677 57,868,854 RGD:10402142
G Dync1li1 dynein cytoplasmic 1 light intermediate chain 1 JBrowse link 8 122,743,274 122,776,801 RGD:10402142
G Dync1li2 dynein, cytoplasmic 1 light intermediate chain 2 JBrowse link 19 740,007 762,897 RGD:10402142
G Dynll1 dynein light chain LC8-type 1 JBrowse link 12 47,074,200 47,076,573 RGD:10402142
G Dynll2 dynein light chain LC8-type 2 JBrowse link 10 75,262,536 75,281,302 RGD:10402142
G Dynlrb1 dynein light chain roadblock-type 1 JBrowse link 3 150,761,329 150,782,493 RGD:10402142
G Dynlrb2 dynein light chain roadblock-type 2 JBrowse link 19 49,016,919 49,028,400 RGD:10402142
G Dynlt1 dynein light chain Tctex-type 1 JBrowse link 1 47,206,892 47,213,785 RGD:10402142
G Dynlt3 dynein light chain Tctex-type 3 JBrowse link X 14,633,342 14,642,356 RGD:10402142
G Fez1 fasciculation and elongation protein zeta 1 JBrowse link 8 39,305,128 39,350,270 RGD:10402141
G Kif1b kinesin family member 1B JBrowse link 5 165,994,803 166,133,497 RGD:10402141
G Kif5a kinesin family member 5A JBrowse link 7 70,515,832 70,552,897 RGD:10402141
G Kif5b kinesin family member 5B JBrowse link 17 54,181,416 54,219,048 RGD:10402141
G Kif5c kinesin family member 5C JBrowse link 3 35,014,157 35,257,417 RGD:10402141
G Ranbp2 RAN binding protein 2 JBrowse link 20
20
28,027,054
28,365,538
28,076,664
28,375,676
RGD:10402141
G Rhot1 ras homolog family member T1 JBrowse link 10 67,559,277 67,640,622 RGD:10402141
G Rhot2 ras homolog family member T2 JBrowse link 10 15,205,943 15,211,739 RGD:10402141
G Snph syntaphilin JBrowse link 3 147,102,394 147,143,576 RGD:10402141
G Sybu syntabulin JBrowse link 7 83,600,614 83,670,121 RGD:10402141
G Trak1 trafficking kinesin protein 1 JBrowse link 8 129,946,596 130,106,382 RGD:10402141
G Trak2 trafficking kinesin protein 2 JBrowse link 9 65,698,706 65,763,351 RGD:10402141
mitochondrial protein import pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Apoo apolipoprotein O JBrowse link X 63,521,033 63,625,134 RGD:10412671
G Apool apolipoprotein O-like JBrowse link X 83,678,269 83,750,550 RGD:10412671
G Chchd3 coiled-coil-helix-coiled-coil-helix domain containing 3 JBrowse link 4 60,080,536 60,358,592 RGD:10412671
G Chchd6 coiled-coil-helix-coiled-coil-helix domain containing 6 JBrowse link 4 121,340,952 121,565,222 RGD:10412671
G Immt inner membrane mitochondrial protein JBrowse link 4 99,753,446 99,789,921 RGD:10412671
G Micos10 mitochondrial contact site and cristae organizing system subunit 10 JBrowse link 5 157,546,855 157,573,183 RGD:10412671
G Oxa1l OXA1L, mitochondrial inner membrane protein JBrowse link 15 33,004,957 33,012,584 RGD:10412658
mRNA nuclear export pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nup107 nucleoporin 107 JBrowse link 7 60,781,724 60,825,225 RGD:9743947
G Nup133 nucleoporin 133 JBrowse link 19 56,681,965 56,731,404 RGD:9743947
G Nup153 nucleoporin 153 JBrowse link 17 18,358,712 18,411,368 RGD:9743947
G Nup160 nucleoporin 160 JBrowse link 3 79,496,239 79,562,163 RGD:9743947
G Nup214 nucleoporin 214 JBrowse link 3
3
9,227,869
10,993,584
9,236,878
11,070,638
RGD:9743947
G Nup37 nucleoporin 37 JBrowse link 7 28,715,299 28,750,978 RGD:9743947
G Nup43 nucleoporin 43 JBrowse link 1 1,771,468 1,781,554 RGD:9743947
G Nup54 nucleoporin 54 JBrowse link 14 17,123,434 17,141,832 RGD:9743947
G Nup58 nucleoporin 58 JBrowse link 15 40,496,754 40,545,933 RGD:9743947
G Nup62 nucleoporin 62 JBrowse link 1 100,811,140 100,827,119 RGD:9743947
G Nup85 nucleoporin 85 JBrowse link 10 104,118,999 104,137,258 RGD:9743947
G Nup98 nucleoporin 98 and 96 precursor JBrowse link 1 167,213,866 167,308,851 RGD:9743947
G Sec13 SEC13 homolog, nuclear pore and COPII coat complex component JBrowse link 4 145,686,186 145,699,577 RGD:9743947
G Seh1l SEH1-like nucleoporin JBrowse link 18 63,545,150 63,568,101 RGD:9743947
multidrug resistance protein mediated transport pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abcb4 ATP binding cassette subfamily B member 4 JBrowse link 4 22,133,984 22,192,687 RGD:1358123
multidrug resistance-associated protein mediated transport pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abcc1 ATP binding cassette subfamily C member 1 JBrowse link 10 549,537 672,235 RGD:1358123
G Abcc10 ATP binding cassette subfamily C member 10 JBrowse link 9 17,041,351 17,061,263 RGD:1358123
G Abcc12 ATP binding cassette subfamily C member 12 JBrowse link 19 21,541,324 21,612,757 RGD:1302885
G Abcc2 ATP binding cassette subfamily C member 2 JBrowse link 1 263,554,426 263,612,556 RGD:70559
G Abcc3 ATP binding cassette subfamily C member 3 JBrowse link 10 82,047,308 82,116,928 RGD:1358123
G Abcc4 ATP binding cassette subfamily C member 4 JBrowse link 15 103,695,415 103,927,980 RGD:1358123
G Abcc5 ATP binding cassette subfamily C member 5 JBrowse link 11 84,395,982 84,490,215 RGD:632215
G Abcc6 ATP binding cassette subfamily C member 6 JBrowse link 1 101,954,786 102,013,252 RGD:1358123
multispecific organic anion transporter mediated transport pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Slc22a6 solute carrier family 22 member 6 JBrowse link 1 224,824,809 224,833,284 RGD:68822
G Slc22a7 solute carrier family 22 member 7 JBrowse link 9 16,925,321 16,931,119 RGD:70525
G Slco1a1 solute carrier organic anion transporter family, member 1a1 JBrowse link 4 176,158,174 176,231,331 RGD:625763
G Slco1a3 solute carrier organic anion transporter family member 1A3 JBrowse link 4 176,255,603 176,299,119 RGD:729732
G Slco1a4 solute carrier organic anion transporter family, member 1a4 JBrowse link 4 175,969,549 176,026,227 RGD:729806
G Slco1a5 solute carrier organic anion transporter family, member 1A5 JBrowse link 4 176,445,856 176,528,117 RGD:70527
G Slco1a6 solute carrier organic anion transporter family, member 1a6 JBrowse link 4 176,345,671 176,390,729 RGD:1358123
G Slco1b2 solute carrier organic anion transporter family member 1B2 JBrowse link 4 175,814,118 175,881,775 RGD:68850
G Slco1c1 solute carrier organic anion transporter family, member 1c1 JBrowse link 4 175,729,709 175,776,749 RGD:634158
G Slco4a1 solute carrier organic anion transporter family, member 4a1 JBrowse link 3 175,838,994 175,857,985 RGD:727314
G Slco4c1 solute carrier organic anion transporter family, member 4C1 JBrowse link 9 104,301,935 104,350,262 RGD:1303977
NXF1-NXT1 export pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Alyref Aly/REF export factor JBrowse link 10 109,768,593 109,774,639 RGD:9743960
G Ddx19b DEAD-box helicase 19B JBrowse link 19 43,217,199 43,246,196 RGD:9743967
G Ddx39b DExD-box helicase 39B JBrowse link 20 4,806,103 4,818,600 RGD:9743960
G Gle1 GLE1 RNA export mediator JBrowse link 3 8,498,098 8,530,218 RGD:9743967
G Nup214 nucleoporin 214 JBrowse link 3
3
9,227,869
10,993,584
9,236,878
11,070,638
RGD:9743967
G Nxf1 nuclear RNA export factor 1 JBrowse link 1 224,957,535 224,970,728 RGD:9743967
G Nxt1 nuclear transport factor 2-like export factor 1 JBrowse link 3 142,993,658 142,996,580 RGD:9743967
G Sarnp SAP domain containing ribonucleoprotein JBrowse link 7 3,246,220 3,300,467 RGD:9743960
G Thoc1 THO complex 1 JBrowse link 18 1,142,540 1,177,084 RGD:9743960
G Thoc2 THO complex 2 JBrowse link X 128,153,824 128,268,327 RGD:9743960
G Thoc5 THO complex 5 JBrowse link 14 85,138,219 85,171,729 RGD:9743960
G Thoc6 THO complex 6 JBrowse link 10 12,989,135 12,994,495 RGD:9743960
G Thoc7 THO complex 7 JBrowse link 15 12,569,235 12,584,101 RGD:9743960
phosphate transport pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Slc20a1 solute carrier family 20 member 1 JBrowse link 3 121,725,204 121,739,160 RGD:7207819
G Slc20a2 solute carrier family 20 member 2 JBrowse link 16 74,318,287 74,408,030 RGD:7207819
G Slc34a1 solute carrier family 34 member 1 JBrowse link 17 9,747,766 9,762,739 RGD:7207819
G Slc34a2 solute carrier family 34 member 2 JBrowse link 14 60,257,211 60,276,516 RGD:7207819
G Slc34a3 solute carrier family 34 member 3 JBrowse link 3 2,448,391 2,454,019 RGD:7207819
presequence pathway of mitochondrial protein import term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dnajc19 DnaJ heat shock protein family (Hsp40) member C19 JBrowse link 2 120,503,093 120,531,782 RGD:10412659
G Grpel1 GrpE-like 1, mitochondrial JBrowse link 14 79,458,951 79,464,782 RGD:10412659
G Grpel2 GrpE-like 2, mitochondrial JBrowse link 18 57,037,995 57,050,234 RGD:10412659
G Hspa9 heat shock protein family A (Hsp70) member 9 JBrowse link 18 27,731,072 27,749,235 RGD:10412659
G Immp1l inner mitochondrial membrane peptidase subunit 1 JBrowse link 3 95,955,126 96,024,316 RGD:10412669
G Immp2l inner mitochondrial membrane peptidase subunit 2 JBrowse link 6 60,958,351 61,859,457 RGD:10412669
G Mipep mitochondrial intermediate peptidase JBrowse link 15 41,084,180 41,192,621 RGD:10412669
G Pam16 presequence translocase associated motor 16 JBrowse link 10 11,146,359 11,153,936 RGD:10412659
G Pmpca peptidase, mitochondrial processing subunit alpha JBrowse link 3 3,834,262 3,842,061 RGD:10412669
G Pmpcb peptidase, mitochondrial processing subunit beta JBrowse link 4 9,908,838 9,921,615 RGD:10412669
G Romo1 reactive oxygen species modulator 1 JBrowse link 3 151,688,213 151,689,813 RGD:10412658
RGD:10412659
G Timm17a translocase of inner mitochondrial membrane 17A JBrowse link 13 52,124,641 52,136,127 RGD:10412658
RGD:10412659
G Timm21 translocase of inner mitochondrial membrane 21 JBrowse link 18 81,803,165 81,807,627 RGD:10412658
RGD:10412659
G Timm23 translocase of inner mitochondrial membrane 23 JBrowse link 16 8,324,038 8,350,067 RGD:10412658
RGD:10412659
G Timm44 translocase of inner mitochondrial membrane 44 JBrowse link 12 2,517,006 2,533,707 RGD:10412659
G Timm50 translocase of inner mitochondrial membrane 50 JBrowse link 1 85,470,810 85,480,813 RGD:10412658
RGD:10412659
G Tomm20 translocase of outer mitochondrial membrane 20 JBrowse link 19 59,863,421 59,873,411 RGD:10412658
RGD:10412659
G Tomm22 translocase of outer mitochondrial membrane 22 JBrowse link 7 120,901,934 120,903,684 RGD:10412658
RGD:10412659
G Tomm40 translocase of outer mitochondrial membrane 40 JBrowse link 1 80,617,749 80,630,253 RGD:10412658
RGD:10412659
G Tomm5 translocase of outer mitochondrial membrane 5 JBrowse link 5 60,655,708 60,658,568 RGD:10412658
RGD:10412659
G Tomm6 translocase of outer mitochondrial membrane 6 JBrowse link 9 15,313,346 15,314,872 RGD:10412658
RGD:10412659
G Tomm7 translocase of outer mitochondrial membrane 7 JBrowse link 4 7,835,949 7,842,790 RGD:10412658
RGD:10412659
G Tomm70 translocase of outer mitochondrial membrane 70 JBrowse link 11 45,477,053 45,511,409 RGD:10412658
RGD:10412659
G Xpnpep3 X-prolyl aminopeptidase 3 JBrowse link 7 122,636,252 122,686,983 RGD:10412669
reverse cholesterol transport pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abca1 ATP binding cassette subfamily A member 1 JBrowse link 5 69,857,717 69,983,042 RGD:1600654
RGD:1600659
G Apoa1 apolipoprotein A1 JBrowse link 8 50,525,091 50,526,875 RGD:1600654
RGD:1600659
G Cav1 caveolin 1 JBrowse link 4 44,597,123 44,630,206 RGD:1600654
RGD:1600659
G Cav2 caveolin 2 JBrowse link 4 44,573,264 44,580,640 RGD:1600654
G Cyp27a1 cytochrome P450, family 27, subfamily a, polypeptide 1 JBrowse link 9 81,968,285 81,998,213 RGD:1600654
G Lcat lecithin cholesterol acyltransferase JBrowse link 19 37,913,333 37,916,799 RGD:1600654
RGD:1600659
G Lipc lipase C, hepatic type JBrowse link 8 77,272,582 77,398,485 RGD:1600654
RGD:1600659
G Pltp phospholipid transfer protein JBrowse link 3 161,304,469 161,322,289 RGD:1600654
G Scarb1 scavenger receptor class B, member 1 JBrowse link 12 36,694,952 36,761,445 RGD:1580028
RGD:1600659
RGD:1600654
RNA transport pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aaas aladin WD repeat nucleoporin JBrowse link 7 143,937,198 143,956,668 RGD:6907045
G Acin1 apoptotic chromatin condensation inducer 1 JBrowse link 15 33,288,369 33,333,256 RGD:6907045
G Alyref Aly/REF export factor JBrowse link 10 109,768,593 109,774,639 RGD:6907045
G Casc3 CASC3 exon junction complex subunit JBrowse link 10 86,724,534 86,744,485 RGD:6907045
G Clns1a chloride nucleotide-sensitive channel 1A JBrowse link 1 162,676,246 162,696,549 RGD:6907045
G Ddx20 DEAD-box helicase 20 JBrowse link 2 208,144,142 208,154,764 RGD:6907045
G Eef1a1 eukaryotic translation elongation factor 1 alpha 1 JBrowse link 8 85,838,594 85,841,816 RGD:6907045
G Eef1a2 eukaryotic translation elongation factor 1 alpha 2 JBrowse link 3 176,657,104 176,666,282 RGD:6907045
G Eif1 eukaryotic translation initiation factor 1 JBrowse link 10 88,227,455 88,229,546 RGD:6907045
G Eif1b eukaryotic translation initiation factor 1B JBrowse link 8 129,158,112 129,160,726 RGD:6907045
G Eif2b1 eukaryotic translation initiation factor 2B subunit alpha JBrowse link 12 37,444,136 37,452,391 RGD:6907045
G Eif2b2 eukaryotic translation initiation factor 2B subunit beta JBrowse link 6 109,044,830 109,051,254 RGD:6907045
G Eif2b3 eukaryotic translation initiation factor 2B subunit gamma JBrowse link 5 135,882,946 135,949,276 RGD:6907045
G Eif2b4 eukaryotic translation initiation factor 2B subunit delta JBrowse link 6 26,546,917 26,552,474 RGD:6907045
G Eif2b5 eukaryotic translation initiation factor 2B subunit epsilon JBrowse link 11 84,080,273 84,090,259 RGD:6907045
G Eif2s1 eukaryotic translation initiation factor 2 subunit alpha JBrowse link 6 102,048,372 102,073,041 RGD:6907045
G Eif2s2 eukaryotic translation initiation factor 2 subunit beta JBrowse link 3 150,391,455 150,412,179 RGD:6907045
G Eif3a eukaryotic translation initiation factor 3, subunit A JBrowse link 1 282,139,809 282,170,017 RGD:6907045
G Eif3b eukaryotic translation initiation factor 3, subunit B JBrowse link 12 16,285,730 16,310,190 RGD:6907045
G Eif3c eukaryotic translation initiation factor 3, subunit C JBrowse link 1 197,964,406 197,982,917 RGD:6907045
G Eif3d eukaryotic translation initiation factor 3, subunit D JBrowse link 7 119,188,189 119,200,578 RGD:6907045
G Eif3el1 eukaryotic translation initiation factor 3, subunit E-like 1 JBrowse link 13 100,129,757 100,162,596 RGD:6907045
G Eif3f eukaryotic translation initiation factor 3, subunit F JBrowse link 1 173,532,826 173,541,806 RGD:6907045
G Eif3g eukaryotic translation initiation factor 3, subunit G JBrowse link 8 21,911,632 21,915,664 RGD:6907045
G Eif3h eukaryotic translation initiation factor 3, subunit H JBrowse link 6 10,151,732 10,236,677 RGD:6907045
G Eif3i eukaryotic translation initiation factor 3, subunit I JBrowse link 5 147,796,580 147,803,853 RGD:6907045
G Eif3j eukaryotic translation initiation factor 3, subunit J JBrowse link 3 113,976,687 113,998,925 RGD:6907045
G Eif4a1 eukaryotic translation initiation factor 4A1 JBrowse link 10 56,271,257 56,276,764 RGD:6907045
G Eif4a2 eukaryotic translation initiation factor 4A2 JBrowse link 11 81,373,047 81,379,680 RGD:6907045
G Eif4a3 eukaryotic translation initiation factor 4A3 JBrowse link 10 108,415,201 108,425,195 RGD:6907045
G Eif4b eukaryotic translation initiation factor 4B JBrowse link 7 143,679,656 143,701,452 RGD:6907045
G Eif4e eukaryotic translation initiation factor 4E JBrowse link 2 243,819,616 243,853,987 RGD:6907045
G Eif4e2 eukaryotic translation initiation factor 4E family member 2 JBrowse link 9 94,310,476 94,325,445 RGD:6907045
G Eif4ebp1 eukaryotic translation initiation factor 4E binding protein 1 JBrowse link 16 68,954,860 68,968,248 RGD:6907045
G Eif4g1 eukaryotic translation initiation factor 4 gamma, 1 JBrowse link 11 83,907,659 83,927,683 RGD:6907045
G Eif4g2 eukaryotic translation initiation factor 4, gamma 2 JBrowse link 1 175,883,362 175,895,510 RGD:6907045
G Eif4g3 eukaryotic translation initiation factor 4 gamma, 3 JBrowse link 5 156,343,663 156,564,037 RGD:6907045
G Eif5 eukaryotic translation initiation factor 5 JBrowse link 6 136,002,983 136,011,409 RGD:6907045
G Eif5b eukaryotic translation initiation factor 5B JBrowse link 9 44,658,724 44,713,518 RGD:6907045
G Elac1 elaC ribonuclease Z 1 JBrowse link 18 69,706,522 69,723,869 RGD:6907045
G Elac2 elaC ribonuclease Z 2 JBrowse link 10 51,478,378 51,501,167 RGD:6907045
G Gemin4 gem (nuclear organelle) associated protein 4 JBrowse link 10 64,364,808 64,375,885 RGD:6907045
G Gemin5 gem (nuclear organelle) associated protein 5 JBrowse link 10 43,552,260 43,599,241 RGD:6907045
G Gemin6 gem (nuclear organelle) associated protein 6 JBrowse link 6 2,907,040 2,911,577 RGD:6907045
G Gemin7 gem (nuclear organelle) associated protein 7 JBrowse link 1 80,473,966 80,487,976 RGD:6907045
G Gemin8 gem (nuclear organelle) associated protein 8 JBrowse link X 29,806,605 29,825,439 RGD:6907045
G Kpnb1 karyopherin subunit beta 1 JBrowse link 10 85,096,517 85,124,641 RGD:6907045
G Magoh mago homolog, exon junction complex subunit JBrowse link 5 127,480,465 127,487,617 RGD:6907045
G Magohb mago homolog B, exon junction complex subunit JBrowse link 4 165,514,584 165,522,366 RGD:6907045
G Ncbp1 nuclear cap binding protein subunit 1 JBrowse link 5 61,734,118 61,767,098 RGD:6907045
G Ndc1 NDC1 transmembrane nucleoporin JBrowse link 5 126,976,636 127,022,941 RGD:6907045
G Nmd3 NMD3 ribosome export adaptor JBrowse link 2 166,402,838 166,428,331 RGD:6907045
G Nup107 nucleoporin 107 JBrowse link 7 60,781,724 60,825,225 RGD:6907045
G Nup133 nucleoporin 133 JBrowse link 19 56,681,965 56,731,404 RGD:6907045
G Nup153 nucleoporin 153 JBrowse link 17 18,358,712 18,411,368 RGD:6907045
G Nup155 nucleoporin 155 JBrowse link 2 57,206,665 57,258,242 RGD:6907045
G Nup160 nucleoporin 160 JBrowse link 3 79,496,239 79,562,163 RGD:6907045
G Nup188 nucleoporin 188 JBrowse link 3 8,852,271 8,908,608 RGD:6907045
G Nup205 nucleoporin 205 JBrowse link 4 62,703,779 62,773,931 RGD:6907045
G Nup210 nucleoporin 210 JBrowse link 4 122,643,952 122,741,322 RGD:6907045
G Nup210l nucleoporin 210-like JBrowse link 2 189,453,932 189,571,918 RGD:6907045
G Nup214 nucleoporin 214 JBrowse link 3
3
9,227,869
10,993,584
9,236,878
11,070,638
RGD:6907045
G Nup35 nucleoporin 35 JBrowse link 3 67,866,784 67,896,828 RGD:6907045
G Nup37 nucleoporin 37 JBrowse link 7 28,715,299 28,750,978 RGD:6907045
G Nup43 nucleoporin 43 JBrowse link 1 1,771,468 1,781,554 RGD:6907045
G Nup50 nucleoporin 50 JBrowse link 7 125,833,557 125,850,830 RGD:6907045
G Nup54 nucleoporin 54 JBrowse link 14 17,123,434 17,141,832 RGD:6907045
G Nup58 nucleoporin 58 JBrowse link 15 40,496,754 40,545,933 RGD:6907045
G Nup62 nucleoporin 62 JBrowse link 1 100,811,140 100,827,119 RGD:6907045
G Nup85 nucleoporin 85 JBrowse link 10 104,118,999 104,137,258 RGD:6907045
G Nup88 nucleoporin 88 JBrowse link 10 57,581,828 57,606,171 RGD:6907045
G Nup93 nucleoporin 93 JBrowse link 19 11,159,769 11,263,980 RGD:6907045
G Nup98 nucleoporin 98 and 96 precursor JBrowse link 1 167,213,866 167,308,851 RGD:6907045
G Nupl2 nucleoporin like 2 JBrowse link 4 7,512,326 7,529,106 RGD:6907045
G Nxf1 nuclear RNA export factor 1 JBrowse link 1 224,957,535 224,970,728 RGD:6907045
G Nxf3 nuclear RNA export factor 3 JBrowse link X 106,562,957 106,587,487 RGD:6907045
G Nxf7 nuclear RNA export factor 7 JBrowse link X 106,049,075 106,066,334 RGD:6907045
G Nxt1 nuclear transport factor 2-like export factor 1 JBrowse link 3 142,993,658 142,996,580 RGD:6907045
G Nxt2 nuclear transport factor 2-like export factor 2 JBrowse link X 113,509,841 113,517,112 RGD:6907045
G Pabpc1 poly(A) binding protein, cytoplasmic 1 JBrowse link 7 75,409,581 75,421,874 RGD:6907045
G Pabpc1l poly(A) binding protein, cytoplasmic 1-like JBrowse link 3 160,410,733 160,447,073 RGD:6907045
G Pabpc1l2a poly(A) binding protein, cytoplasmic 1-like 2A JBrowse link X 73,894,603 73,895,742 RGD:6907045
G Pabpc2 poly(A) binding protein, cytoplasmic 2 JBrowse link 18 32,964,763 32,967,031 RGD:6907045
G Pabpc4 poly(A) binding protein, cytoplasmic 4 JBrowse link 5 140,978,893 140,994,732 RGD:6907045
G Pabpc4l poly(A) binding protein, cytoplasmic 4-like JBrowse link 2 130,656,212 130,658,202 RGD:6907045
G Pabpc5 poly A binding protein, cytoplasmic 5 JBrowse link X 92,130,292 92,133,756 RGD:6907045
G Paip1 poly(A) binding protein interacting protein 1 JBrowse link 2 52,300,921 52,328,212 RGD:6907045
G Phax phosphorylated adaptor for RNA export JBrowse link 18 51,662,294 51,678,981 RGD:6907045
G Pigz phosphatidylinositol glycan anchor biosynthesis, class Z JBrowse link 11 72,930,040 72,936,002 RGD:6907045
G Pnn pinin, desmosome associated protein JBrowse link 6 80,159,364 80,167,677 RGD:6907045
G Pom121 POM121 transmembrane nucleoporin JBrowse link 12 24,316,575 24,341,943 RGD:6907045
G Pom121l2 POM121 transmembrane nucleoporin-like 2 JBrowse link 17 44,588,022 44,595,347 RGD:6907045
G Pop1 POP1 homolog, ribonuclease P/MRP subunit JBrowse link 7 73,270,403 73,298,209 RGD:6907045
G Pop4 POP4 homolog, ribonuclease P/MRP subunit JBrowse link 1 94,661,127 94,669,461 RGD:6907045
G Pop5 POP5 homolog, ribonuclease P/MRP subunit JBrowse link 12 47,138,346 47,143,152 RGD:6907045
G Pop7 POP7 homolog, ribonuclease P/MRP subunit JBrowse link 12 22,259,713 22,260,754 RGD:6907045
G Prmt5 protein arginine methyltransferase 5 JBrowse link 15 33,156,508 33,165,893 RGD:6907045
G Pym1 PYM homolog 1, exon junction complex associated factor JBrowse link 7 3,172,798 3,193,994 RGD:6907045
G Rae1 ribonucleic acid export 1 JBrowse link 3 171,012,984 171,030,392 RGD:6907045
G Ran RAN, member RAS oncogene family JBrowse link 12 31,319,556 31,324,105 RGD:6907045
G Ranbp2 RAN binding protein 2 JBrowse link 20
20
28,027,054
28,365,538
28,076,664
28,375,676
RGD:6907045
G Rangap1 RAN GTPase activating protein 1 JBrowse link 7 122,939,266 122,967,178 RGD:6907045
G Rasl2-9 RAS-like, family 2, locus 9 JBrowse link 1 72,272,032 72,273,210 RGD:6907045
G Rbm8a RNA binding motif protein 8A JBrowse link 2 198,755,261 198,758,028 RGD:6907045
G RGD1306195 similar to RAN protein JBrowse link 5 54,480,783 54,482,159 RGD:6907045
G RGD1561590 similar to SAP18 JBrowse link 10 89,635,651 89,636,271 RGD:6907045
G Rnps1 RNA binding protein with serine rich domain 1 JBrowse link 10 13,786,339 13,796,720 RGD:6907045
G Rpp14 ribonuclease P/MRP subunit p14 JBrowse link 15 18,625,963 18,636,157 RGD:6907045
G Rpp21 ribonuclease P/MRP subunit p21 JBrowse link 20 2,515,541 2,517,471 RGD:6907045
G Rpp25 ribonuclease P and MRP subunit p25 JBrowse link 8 62,283,336 62,284,716 RGD:6907045
G Rpp30 ribonuclease P/MRP subunit p30 JBrowse link 1 254,697,247 254,720,093 RGD:6907045
G Rpp38 ribonuclease P/MRP subunit p38 JBrowse link 17 78,915,450 78,919,144 RGD:6907045
G Rpp40 ribonuclease P/MRP subunit p40 JBrowse link 17 29,638,647 29,647,709 RGD:6907045
G Sap18 Sin3A associated protein 18 JBrowse link 15 38,069,320 38,073,625 RGD:6907045
G Sec13 SEC13 homolog, nuclear pore and COPII coat complex component JBrowse link 4 145,686,186 145,699,577 RGD:6907045
G Senp17 Sumo1/sentrin/SMT3 specific peptidase 17 JBrowse link 4 160,865,065 160,866,064 RGD:6907045
G Senp18 Sumo1/sentrin/SMT3 specific peptidase 18 JBrowse link 4 160,802,131 160,803,558 RGD:6907045
G Senp2 SUMO specific peptidase 2 JBrowse link 11 82,627,973 82,664,702 RGD:6907045
G Smn1 survival of motor neuron 1, telomeric JBrowse link 2 30,360,101 30,371,147 RGD:6907045
G Snupn snurportin 1 JBrowse link 8 61,614,798 61,654,809 RGD:6907045
G Srrm1 serine and arginine repetitive matrix 1 JBrowse link 5 153,675,619 153,708,187 RGD:6907045
G Strap serine/threonine kinase receptor associated protein JBrowse link 4 171,730,629 171,744,877 RGD:6907045
G Sumo1 small ubiquitin-like modifier 1 JBrowse link 9 66,453,428 66,483,614 RGD:6907045
G Sumo2 small ubiquitin-like modifier 2 JBrowse link 10 104,085,401 104,097,983 RGD:6907045
G Sumo3 small ubiquitin-like modifier 3 JBrowse link 20 11,726,488 11,737,050 RGD:6907045
G Tacc3 transforming, acidic coiled-coil containing protein 3 JBrowse link 14 82,336,283 82,350,069 RGD:6907045
G Tgs1 trimethylguanosine synthase 1 JBrowse link 5 16,413,356 16,446,881 RGD:6907045
G Thoc1 THO complex 1 JBrowse link 18 1,142,540 1,177,084 RGD:6907045
G Thoc2 THO complex 2 JBrowse link X 128,153,824 128,268,327 RGD:6907045
G Thoc3 THO complex 3 JBrowse link 17 10,676,943 10,686,134 RGD:6907045
G Thoc5 THO complex 5 JBrowse link 14 85,138,219 85,171,729 RGD:6907045
G Thoc6 THO complex 6 JBrowse link 10 12,989,135 12,994,495 RGD:6907045
G Thoc7 THO complex 7 JBrowse link 15 12,569,235 12,584,101 RGD:6907045
G Tpr translocated promoter region, nuclear basket protein JBrowse link 13 67,611,685 67,672,833 RGD:6907045
G Trnt1 tRNA nucleotidyl transferase 1 JBrowse link 4 138,855,497 138,869,217 RGD:6907045
G Ube2i ubiquitin-conjugating enzyme E2I JBrowse link 10 14,618,615 14,639,274 RGD:6907045
G Upf2 UPF2, regulator of nonsense mediated mRNA decay JBrowse link 17 76,176,379 76,287,246 RGD:6907045
G Upf3a UPF3A, regulator of nonsense mediated mRNA decay JBrowse link 16 81,521,084 81,532,512 RGD:6907045
G Upf3b UPF3B, regulator of nonsense mediated mRNA decay JBrowse link X 123,713,327 123,731,431 RGD:6907045
G Xpo1 exportin 1 JBrowse link 14 108,007,421 108,049,088 RGD:6907045
G Xpo5 exportin 5 JBrowse link 9 17,125,201 17,163,170 RGD:6907045
G Xpot exportin for tRNA JBrowse link 7 63,688,646 63,728,988 RGD:6907045
sodium-glucose cotransporter mediated glucose transport pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Slc5a1 solute carrier family 5 member 1 JBrowse link 14 82,910,448 82,975,303 RGD:1626159
RGD:1625539
G Slc5a2 solute carrier family 5 member 2 JBrowse link 1 199,682,688 199,688,809 RGD:1626159
RGD:1625539
water transport pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aqp1 aquaporin 1 JBrowse link 4 85,551,503 85,563,683 RGD:2312795
G Aqp2 aquaporin 2 JBrowse link 7 141,237,802 141,242,837 RGD:2312795
G Aqp3 aquaporin 3 (Gill blood group) JBrowse link 5 57,423,735 57,429,252 RGD:2312795
G Aqp4 aquaporin 4 JBrowse link 18 6,766,009 6,782,757 RGD:2312795
G Aqp5 aquaporin 5 JBrowse link 7 141,249,044 141,252,576 RGD:2312795
G Aqp6 aquaporin 6 JBrowse link 7 141,258,585 141,261,518 RGD:2312795
G Aqp7 aquaporin 7 JBrowse link 5 57,358,297 57,372,332 RGD:2312795
G Aqp9 aquaporin 9 JBrowse link 8 77,559,621 77,599,781 RGD:2312795

Term paths to the root
Path 1
Term Annotations click to browse term
  pathway 6016
    regulatory pathway 3823
      transport pathway 468
        RNA transport pathway + 152
        altered transport pathway + 3
        bile acid transport pathway 66
        cholesterol transport pathway + 9
        cofactor transport pathway + 0
        ion transport pathway + 68
        mitochondria transport pathway + 33
        monoamine transport pathway 0
        phosphate transport pathway 5
        protein transport pathway + 43
        sugar transport pathway + 79
        transport pathway for the elimination of drugs, endogenous or exogenous compounds and metabolites + 20
        water transport pathway 8
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.