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ONTOLOGY REPORT - ANNOTATIONS


Term:oxidative phosphorylation pathway
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Accession:PW:0001059 term browser browse the term
Definition:Oxidative phosphorylation is the coupling of the electron transport chain and the ATP biosynthetic pathways. The electron transfer chain generates an electrochemical gradient that drives the phosphorylation of ADP. Under certain circumstances the two may be uncoupled.
Synonyms:related_synonym: KEGG:00190


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oxidative phosphorylation pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atp12a ATPase H+/K+ transporting non-gastric alpha2 subunit JBrowse link NW_004955497 225,401 251,024 RGD:9068941
G Atp4a ATPase H+/K+ transporting subunit alpha JBrowse link NW_004955468 4,778,327 4,844,498 RGD:9068941
G Atp4b ATPase H+/K+ transporting subunit beta JBrowse link NW_004955404 362,410 372,077 RGD:9068941
G Atp5f1a ATP synthase F1 subunit alpha JBrowse link NW_004955402 31,652,226 31,662,114 RGD:9068941
G Atp5f1b ATP synthase F1 subunit beta JBrowse link NW_004955458 4,188,167 4,195,575 RGD:9068941
G Atp5f1c ATP synthase F1 subunit gamma JBrowse link NW_004955421 24,234,473 24,253,640 RGD:9068941
G Atp5f1d ATP synthase F1 subunit delta JBrowse link NW_004955495 6,664,394 6,666,693 RGD:9068941
G Atp5f1e ATP synthase F1 subunit epsilon JBrowse link NW_004955445 563,642 567,865 RGD:9068941
G Atp5mc1 ATP synthase membrane subunit c locus 1 JBrowse link NW_004955451 12,426,309 12,429,460 RGD:9068941
G Atp5mc2 ATP synthase membrane subunit c locus 2 JBrowse link NW_004955458 952,817 960,963 RGD:9068941
G Atp5mc3 ATP synthase membrane subunit c locus 3 JBrowse link NW_004955449 310,839 314,086 RGD:9068941
G Atp5me ATP synthase membrane subunit e JBrowse link NW_004955404 11,420,964 11,421,171 RGD:9068941
G Atp5mf ATP synthase membrane subunit f JBrowse link NW_004955460 15,129,651 15,136,722 RGD:9068941
G Atp5mg ATP synthase membrane subunit g JBrowse link NW_004955412 19,555,736 19,563,094 RGD:9068941
G Atp5pb ATP synthase peripheral stalk-membrane subunit b JBrowse link NW_004955435 14,940,502 14,952,423 RGD:9068941
G Atp5pd ATP synthase peripheral stalk subunit d JBrowse link NW_004955553 1,893,767 1,897,175 RGD:9068941
G Atp5pf ATP synthase peripheral stalk subunit F6 JBrowse link NW_004955407 25,601,253 25,609,933 RGD:9068941
G Atp5po ATP synthase peripheral stalk subunit OSCP JBrowse link NW_004955407 33,288,194 33,298,817 RGD:9068941
G Atp6ap1 ATPase H+ transporting accessory protein 1 JBrowse link NW_004955580 927,546 934,633 RGD:9068941
G Atp6v0a1 ATPase H+ transporting V0 subunit a1 JBrowse link NW_004955451 16,396,287 16,442,596 RGD:9068941
G Atp6v0a2 ATPase H+ transporting V0 subunit a2 JBrowse link NW_004955482 5,311,434 5,337,684 RGD:9068941
G Atp6v0a4 ATPase H+ transporting V0 subunit a4 JBrowse link NW_004955494 4,174,542 4,251,450 RGD:9068941
G Atp6v0b ATPase H+ transporting V0 subunit b JBrowse link NW_004955537 3,501,011 3,504,408 RGD:9068941
G Atp6v0c ATPase H+ transporting V0 subunit c JBrowse link NW_004955442 14,791,795 14,798,066 RGD:9068941
G Atp6v0d1 ATPase H+ transporting V0 subunit d1 JBrowse link NW_004955484 9,167,439 9,206,193 RGD:9068941
G Atp6v0d2 ATPase H+ transporting V0 subunit d2 JBrowse link NW_004955417 3,778,587 3,832,973 RGD:9068941
G Atp6v0e1 ATPase H+ transporting V0 subunit e1 JBrowse link NW_004955408 25,667,703 25,703,550 RGD:9068941
G Atp6v0e2 ATPase H+ transporting V0 subunit e2 JBrowse link NW_004955491 4,929,405 4,935,247 RGD:9068941
G Atp6v1a ATPase H+ transporting V1 subunit A JBrowse link NW_004955427 13,868,683 13,922,028 RGD:9068941
G Atp6v1b1 ATPase H+ transporting V1 subunit B1 JBrowse link NW_004955424 14,256,096 14,281,572 RGD:9068941
G Atp6v1b2 ATPase H+ transporting V1 subunit B2 JBrowse link NW_004955403 43,860,811 43,886,398 RGD:9068941
G Atp6v1c1 ATPase H+ transporting V1 subunit C1 JBrowse link NW_004955417 27,340,916 27,376,541 RGD:9068941
G Atp6v1c2 ATPase H+ transporting V1 subunit C2 JBrowse link NW_004955487 5,711,235 5,735,081 RGD:9068941
G Atp6v1d ATPase H+ transporting V1 subunit D JBrowse link NW_004955466 2,855,597 2,869,319 RGD:9068941
G Atp6v1e1 ATPase H+ transporting V1 subunit E1 JBrowse link NW_004955454 5,669,883 5,688,623 RGD:9068941
G Atp6v1e2 ATPase H+ transporting V1 subunit E2 JBrowse link NW_004955441 13,432,951 13,458,467 RGD:9068941
G Atp6v1f ATPase H+ transporting V1 subunit F JBrowse link NW_004955479 9,664,574 9,667,667 RGD:9068941
G Atp6v1g1 ATPase H+ transporting V1 subunit G1 JBrowse link NW_004955419 13,047,755 13,056,113 RGD:9068941
G Atp6v1g2 ATPase H+ transporting V1 subunit G2 JBrowse link NW_004955437 86,053 88,355 RGD:9068941
G Atp6v1g3 ATPase H+ transporting V1 subunit G3 JBrowse link NW_004955406 34,910,498 34,927,745 RGD:9068941
G Atp6v1h ATPase H+ transporting V1 subunit H JBrowse link NW_004955454 13,099,488 13,213,018 RGD:9068941
G Lhpp phospholysine phosphohistidine inorganic pyrophosphate phosphatase JBrowse link NW_004955477 2,480,660 2,606,887 RGD:9068941
G LOC102005637 cytochrome c oxidase subunit 8C, mitochondrial JBrowse link NW_004955438 15,480,509 15,481,812 RGD:9068941
G LOC102005653 cytochrome c oxidase subunit 5A, mitochondrial JBrowse link NW_004955450 3,036,387 3,049,121 RGD:9068941
G LOC102005965 cytochrome b-c1 complex subunit 1, mitochondrial JBrowse link NW_004955532 685,315 691,286 RGD:9068941
G LOC102006357 cytochrome c oxidase subunit 6A2, mitochondrial JBrowse link NW_004955493 8,261,297 8,261,961 RGD:9068941
G LOC102006544 cytochrome b-c1 complex subunit 8 JBrowse link NW_004955408 4,240,072 4,241,342 RGD:9068941
G LOC102007781 cytochrome b-c1 complex subunit 2, mitochondrial JBrowse link NW_004955493 655,619 689,705 RGD:9068941
G LOC102008533 cytochrome c oxidase subunit 7C, mitochondrial JBrowse link NW_004955418 24,413,883 24,416,530 RGD:9068941
G LOC102008614 cytochrome c oxidase subunit 7A1, mitochondrial JBrowse link NW_004955468 2,442,819 2,445,169 RGD:9068941
G LOC102011733 cytochrome b-c1 complex subunit 9 JBrowse link NW_004955455 4,013,197 4,015,448 RGD:9068941
G LOC102012060 cytochrome c oxidase subunit 6A1, mitochondrial JBrowse link NW_004955455 11,201,031 11,203,644 RGD:9068941
G LOC102014046 cytochrome c oxidase subunit 6C JBrowse link NW_004955417 15,230,562 15,241,610 RGD:9068941
G LOC102014666 cytochrome b-c1 complex subunit 7 JBrowse link NW_004955417 12,225,505 12,232,944 RGD:9068941
G LOC102014998 cytochrome b-c1 complex subunit Rieske, mitochondrial JBrowse link NW_004955468 8,331,153 8,338,628 RGD:9068941
G LOC102015775 cytochrome c oxidase subunit 7A-related protein, mitochondrial JBrowse link NW_004955441 9,732,168 9,743,052 RGD:9068941
G LOC102017801 cytochrome c oxidase assembly protein COX15 homolog JBrowse link NW_004955507 5,600,605 5,617,556 RGD:9068941
G LOC102018506 cytochrome c oxidase subunit 4 isoform 2, mitochondrial JBrowse link NW_004955422 29,320,720 29,329,082 RGD:9068941
G LOC102019456 cytochrome c oxidase assembly protein COX11, mitochondrial JBrowse link NW_004955451 7,635,704 7,642,724 RGD:9068941
G LOC102020379 cytochrome c oxidase subunit 4 isoform 1, mitochondrial JBrowse link NW_004955541 885,824 890,824 RGD:9068941
G LOC102020494 cytochrome c oxidase subunit 7B, mitochondrial JBrowse link NW_004955557 1,341,934 1,348,610 RGD:9068941
G LOC102021151 cytochrome c oxidase copper chaperone JBrowse link NW_004955427 19,376,482 19,384,270 RGD:9068941
G LOC102022061 cytochrome b-c1 complex subunit 6, mitochondrial JBrowse link NW_004955464 11,963,706 11,975,959 RGD:9068941
G LOC102022268 protoheme IX farnesyltransferase, mitochondrial JBrowse link NW_004955467 3,294,200 3,415,778 RGD:9068941
G LOC102023082 cytochrome c oxidase subunit 6B2 JBrowse link NW_004955567 890,281 891,675 RGD:9068941
G LOC102023109 cytochrome c1, heme protein, mitochondrial JBrowse link NW_004955454 2,758,935 2,760,569 RGD:9068941
G LOC102024691 cytochrome c oxidase subunit 8A, mitochondrial JBrowse link NW_004955422 21,062,061 21,065,655 RGD:9068941
G LOC102024993 cytochrome c oxidase subunit 5B, mitochondrial JBrowse link NW_004955470 4,321,555 4,323,449 RGD:9068941
G LOC102025227 cytochrome c oxidase subunit 6B1 JBrowse link NW_004955468 2,884,958 2,891,952 RGD:9068941
G LOC102028311 cytochrome b-c1 complex subunit 10 JBrowse link NW_004955495 6,368,827 6,372,938 RGD:9068941
G LOC102029536 cytochrome c oxidase subunit 7A2, mitochondrial JBrowse link NW_004955502 3,753,029 3,759,663 RGD:9068941
G LOC102030009 cytochrome c oxidase subunit 7B2, mitochondrial JBrowse link NW_004955443 1,650,087 1,768,318 RGD:9068941
G Ndufa1 NADH:ubiquinone oxidoreductase subunit A1 JBrowse link NW_004955534 152,291 154,183 RGD:9068941
G Ndufa10 NADH:ubiquinone oxidoreductase subunit A10 JBrowse link NW_004955542 1,329,802 1,370,109 RGD:9068941
G Ndufa11 NADH:ubiquinone oxidoreductase subunit A11 JBrowse link NW_004955495 3,557,016 3,564,999 RGD:9068941
G Ndufa12 NADH:ubiquinone oxidoreductase subunit A12 JBrowse link NW_004955405 31,607,182 31,621,538 RGD:9068941
G Ndufa13 NADH:ubiquinone oxidoreductase subunit A13 JBrowse link NW_004955524 2,426,604 2,433,682 RGD:9068941
G Ndufa2 NADH:ubiquinone oxidoreductase subunit A2 JBrowse link NW_004955418 52,952 55,060 RGD:9068941
G Ndufa3 NADH:ubiquinone oxidoreductase subunit A3 JBrowse link NW_004955604 139,844 141,578 RGD:9068941
G Ndufa4 NDUFA4 mitochondrial complex associated JBrowse link NW_004955432 17,502,272 17,509,517 RGD:9068941
G Ndufa4l2 NDUFA4 mitochondrial complex associated like 2 JBrowse link NW_004955458 4,962,868 4,965,838 RGD:9068941
G Ndufa5 NADH:ubiquinone oxidoreductase subunit A5 JBrowse link NW_004955479 5,065,948 5,080,215 RGD:9068941
G Ndufa6 NADH:ubiquinone oxidoreductase subunit A6 JBrowse link NW_004955413 27,485,678 27,491,757 RGD:9068941
G Ndufa7 NADH:ubiquinone oxidoreductase subunit A7 JBrowse link NW_004955563 1,074,182 1,080,928 RGD:9068941
G Ndufa8 NADH:ubiquinone oxidoreductase subunit A8 JBrowse link NW_004955419 5,903,392 5,917,045 RGD:9068941
G Ndufa9 NADH:ubiquinone oxidoreductase subunit A9 JBrowse link NW_004955413 2,435,717 2,475,158 RGD:9068941
G Ndufb1 NADH:ubiquinone oxidoreductase subunit B1 JBrowse link NW_004955438 14,443,558 14,449,754 RGD:9068941
G Ndufb10 NADH:ubiquinone oxidoreductase subunit B10 JBrowse link NW_004955442 15,306,688 15,309,281 RGD:9068941
G Ndufb11 NADH:ubiquinone oxidoreductase subunit B11 JBrowse link NW_004955516 934,740 937,207 RGD:9068941
G Ndufb2 NADH:ubiquinone oxidoreductase subunit B2 JBrowse link NW_004955494 2,723,740 2,731,054 RGD:9068941
G Ndufb3 NADH:ubiquinone oxidoreductase subunit B3 JBrowse link NW_004955403 477,138 483,122 RGD:9068941
G Ndufb4 NADH:ubiquinone oxidoreductase subunit B4 JBrowse link NW_004955427 20,117,550 20,124,114 RGD:9068941
G Ndufb5 NADH:ubiquinone oxidoreductase subunit B5 JBrowse link NW_004955420 8,778,271 8,793,634 RGD:9068941
G Ndufb6 NADH:ubiquinone oxidoreductase subunit B6 JBrowse link NW_004955472 3,054,026 3,064,530 RGD:9068941
G Ndufb7 NADH:ubiquinone oxidoreductase subunit B7 JBrowse link NW_004955415 33,138,888 33,142,663 RGD:9068941
G Ndufb8 NADH:ubiquinone oxidoreductase subunit B8 JBrowse link NW_004955485 9,607,781 9,613,123 RGD:9068941
G Ndufb9 NADH:ubiquinone oxidoreductase subunit B9 JBrowse link NW_004955540 3,198,140 3,203,470 RGD:9068941
G Ndufc1 NADH:ubiquinone oxidoreductase subunit C1 JBrowse link NW_004955428 4,343,702 4,347,001 RGD:9068941
G Ndufc2 NADH:ubiquinone oxidoreductase subunit C2 JBrowse link NW_004955414 13,867,880 13,878,040 RGD:9068941
G Ndufs1 NADH:ubiquinone oxidoreductase core subunit S1 JBrowse link NW_004955457 8,838,216 8,879,059 RGD:9068941
G Ndufs2 NADH:ubiquinone oxidoreductase core subunit S2 JBrowse link NW_004955468 12,961,873 12,971,278 RGD:9068941
G Ndufs3 NADH:ubiquinone oxidoreductase core subunit S3 JBrowse link NW_004955422 713,370 717,926 RGD:9068941
G Ndufs4 NADH:ubiquinone oxidoreductase subunit S4 JBrowse link NW_004955446 13,764,907 13,864,824 RGD:9068941
G Ndufs5 NADH:ubiquinone oxidoreductase subunit S5 JBrowse link NW_004955452 16,634,537 16,641,344 RGD:9068941
G Ndufs6 NADH:ubiquinone oxidoreductase subunit S6 JBrowse link NW_004955504 893,112 903,282 RGD:9068941
G Ndufs7 NADH:ubiquinone oxidoreductase core subunit S7 JBrowse link NW_004955495 6,540,360 6,548,072 RGD:9068941
G Ndufs8 NADH:ubiquinone oxidoreductase core subunit S8 JBrowse link NW_004955422 17,781,374 17,785,395 RGD:9068941
G Ndufv1 NADH:ubiquinone oxidoreductase core subunit V1 JBrowse link NW_004955422 17,876,496 17,881,773 RGD:9068941
G Ndufv2 NADH:ubiquinone oxidoreductase core subunit V2 JBrowse link NW_004955402 2,802,366 2,818,049 RGD:9068941
G Ndufv3 NADH:ubiquinone oxidoreductase subunit V3 JBrowse link NW_004955407 39,029,943 39,039,425 RGD:9068941
G Ppa1 inorganic pyrophosphatase 1 JBrowse link NW_004955437 21,027,516 21,057,712 RGD:9068941
G Ppa2 inorganic pyrophosphatase 2 JBrowse link NW_004955496 3,765,038 3,831,312 RGD:9068941
G Sdha succinate dehydrogenase complex flavoprotein subunit A JBrowse link NW_004955504 36,939 66,507 RGD:9068941
G Sdhb succinate dehydrogenase complex iron sulfur subunit B JBrowse link NW_004955527 1,769,280 1,792,496 RGD:9068941
G Sdhc succinate dehydrogenase complex subunit C JBrowse link NW_004955468 13,050,359 13,083,932 RGD:9068941
G Sdhd succinate dehydrogenase complex subunit D JBrowse link NW_004955412 13,768,501 13,778,944 RGD:9068941
G Tcirg1 T cell immune regulator 1, ATPase H+ transporting V0 subunit a3 JBrowse link NW_004955422 17,768,469 17,778,976 RGD:9068941
electron transport chain pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atp5f1a ATP synthase F1 subunit alpha JBrowse link NW_004955402 31,652,226 31,662,114 RGD:9068941
G Atp5f1b ATP synthase F1 subunit beta JBrowse link NW_004955458 4,188,167 4,195,575 RGD:9068941
G Atp5f1c ATP synthase F1 subunit gamma JBrowse link NW_004955421 24,234,473 24,253,640 RGD:9068941
G Atp5f1d ATP synthase F1 subunit delta JBrowse link NW_004955495 6,664,394 6,666,693 RGD:9068941
G Atp5f1e ATP synthase F1 subunit epsilon JBrowse link NW_004955445 563,642 567,865 RGD:9068941
G Atp5mc2 ATP synthase membrane subunit c locus 2 JBrowse link NW_004955458 952,817 960,963 RGD:9068941
G Atp5pb ATP synthase peripheral stalk-membrane subunit b JBrowse link NW_004955435 14,940,502 14,952,423 RGD:9068941
G Gapdh glyceraldehyde-3-phosphate dehydrogenase JBrowse link NW_004955413 4,162,467 4,166,783 RGD:9068941
G Gpd1 glycerol-3-phosphate dehydrogenase 1 JBrowse link NW_004955547 676,661 683,906 RGD:9068941
G Gpd2 glycerol-3-phosphate dehydrogenase 2 JBrowse link NW_004955449 16,695,855 16,804,184 RGD:9068941
G LOC102005965 cytochrome b-c1 complex subunit 1, mitochondrial JBrowse link NW_004955532 685,315 691,286 RGD:9068941
G LOC102022061 cytochrome b-c1 complex subunit 6, mitochondrial JBrowse link NW_004955464 11,963,706 11,975,959 RGD:9068941
G LOC102023786 cytochrome c, somatic JBrowse link NW_004955410 27,086,405 27,089,255 RGD:9068941
G Ndufa1 NADH:ubiquinone oxidoreductase subunit A1 JBrowse link NW_004955534 152,291 154,183 RGD:9068941
G Sdha succinate dehydrogenase complex flavoprotein subunit A JBrowse link NW_004955504 36,939 66,507 RGD:9068941
G Sdhb succinate dehydrogenase complex iron sulfur subunit B JBrowse link NW_004955527 1,769,280 1,792,496 RGD:9068941
G Sdhc succinate dehydrogenase complex subunit C JBrowse link NW_004955468 13,050,359 13,083,932 RGD:9068941
G Sdhd succinate dehydrogenase complex subunit D JBrowse link NW_004955412 13,768,501 13,778,944 RGD:9068941
G Slc25a4 solute carrier family 25 member 4 JBrowse link NW_004955403 23,878,329 23,882,322 RGD:9068941
G Slc37a4 solute carrier family 37 member 4 JBrowse link NW_004955412 20,133,652 20,140,134 RGD:9068941

Term paths to the root
Path 1
Term Annotations click to browse term
  pathway 5435
    classic metabolic pathway 1640
      energy metabolic pathway 154
        oxidative phosphorylation pathway 123
          ATP biosynthetic pathway 0
          electron transport chain pathway 20
Path 2
Term Annotations click to browse term
  pathway 5435
    regulatory pathway 3344
      homeostasis pathway 1553
        energy homeostasis pathway 421
          oxidative phosphorylation pathway 123
            ATP biosynthetic pathway 0
            electron transport chain pathway 20
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.