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ONTOLOGY REPORT - ANNOTATIONS


Term:INO80 family mediated chromatin remodeling pathway
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Accession:PW:0001408 term browser browse the term
Definition:The INO80 (inositol requiring 80) family of remodelers has been initially purified from Saccharomyces cerevisiae. It promotes transcriptional activation and DNA repair.


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INO80 family mediated chromatin remodeling pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Actb actin, beta JBrowse link 5 142,903,115 142,907,976 RGD:9495926
G Actl6a actin-like 6A JBrowse link 3 32,708,546 32,726,973 RGD:9495926
G Actr5 ARP5 actin-related protein 5 JBrowse link 2 158,624,881 158,639,211 RGD:9495926
G Actr6 ARP6 actin-related protein 6 JBrowse link 10 89,711,966 89,732,319 RGD:9495926
G Actr8 ARP8 actin-related protein 8 JBrowse link 14 29,978,337 29,995,452 RGD:9495926
G Brd8 bromodomain containing 8 JBrowse link 18 34,598,611 34,624,863 RGD:9495926
G Dmap1 DNA methyltransferase 1-associated protein 1 JBrowse link 4 117,674,681 117,682,321 RGD:9495926
G Ep400 E1A binding protein p400 JBrowse link 5 110,664,373 110,770,927 RGD:9495926
G Epc1 enhancer of polycomb homolog 1 JBrowse link 18 6,435,951 6,516,108 RGD:9495926
G Epc2 enhancer of polycomb homolog 2 JBrowse link 2 49,450,755 49,551,947 RGD:9495926
G Ing3 inhibitor of growth family, member 3 JBrowse link 6 21,949,571 21,976,038 RGD:9495926
G Ino80 INO80 complex subunit JBrowse link 2 119,373,042 119,478,685 RGD:9495926
G Ino80b INO80 complex subunit B JBrowse link 6 83,121,765 83,125,119 RGD:9495926
G Ino80c INO80 complex subunit C JBrowse link 18 24,104,761 24,121,819 RGD:9495926
G Ino80d INO80 complex subunit D JBrowse link 1 63,047,801 63,114,267 RGD:9495926
G Ino80e INO80 complex subunit E JBrowse link 7 126,851,584 126,862,372 RGD:9495926
G Kat5 K(lysine) acetyltransferase 5 JBrowse link 19 5,603,014 5,611,556 RGD:9495926
G Mcrs1 microspherule protein 1 JBrowse link 15 99,242,817 99,251,961 RGD:9495926
G Meaf6 MYST/Esa1-associated factor 6 JBrowse link 4 125,085,099 125,113,238 RGD:9495926
G Morf4l1 mortality factor 4 like 1 JBrowse link 9 90,091,669 90,114,820 RGD:9495926
G Morf4l2 mortality factor 4 like 2 JBrowse link X 136,732,942 136,743,686 RGD:9495926
G Mrgbp MRG/MORF4L binding protein JBrowse link 2 180,581,198 180,586,304 RGD:9495926
G Nfrkb nuclear factor related to kappa B binding protein JBrowse link 9 31,386,162 31,421,333 RGD:9495926
G Ruvbl1 RuvB-like protein 1 JBrowse link 6 88,465,409 88,497,566 RGD:9495926
G Ruvbl2 RuvB-like protein 2 JBrowse link 7 45,421,896 45,436,171 RGD:9495926
G Srcap Snf2-related CREBBP activator protein JBrowse link 7 127,511,983 127,561,219 RGD:9495926
G Tfpt TCF3 (E2A) fusion partner JBrowse link 7 3,620,324 3,629,929 RGD:9495926
G Trrap transformation/transcription domain-associated protein JBrowse link 5 144,767,737 144,859,778 RGD:9495926
G Uchl5 ubiquitin carboxyl-terminal esterase L5 JBrowse link 1 143,777,234 143,807,466 RGD:9495926
G Vps72 vacuolar protein sorting 72 JBrowse link 3 95,111,042 95,123,051 RGD:9495926
G Yeats4 YEATS domain containing 4 JBrowse link 10 117,215,141 117,224,507 RGD:9495926
G Yy1 YY1 transcription factor JBrowse link 12 108,792,945 108,820,148 RGD:9495926
G Znhit1 zinc finger, HIT domain containing 1 JBrowse link 5 136,982,194 136,987,959 RGD:9495926

Term paths to the root
Path 1
Term Annotations click to browse term
  pathway 6011
    regulatory pathway 3631
      pathway pertinent to DNA replication and repair, cell cycle, maintenance of genomic integrity, RNA and protein biosynthesis 1647
        chromatin modification/remodeling pathway 264
          chromatin remodeling pathway 74
            INO80 family mediated chromatin remodeling pathway 33
Path 2
Term Annotations click to browse term
  pathway 6011
    regulatory pathway 3631
      pathway pertinent to DNA replication and repair, cell cycle, maintenance of genomic integrity, RNA and protein biosynthesis 1647
        DNA damage response pathway 402
          DNA repair pathway 381
            chromatin modification/remodeling pathway 264
              chromatin remodeling pathway 74
                INO80 family mediated chromatin remodeling pathway 33
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.