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RAT STRAINS - ANNOTATIONS

The Rat Strain Ontology (RS) is currently being developed at the Rat Genome Database. For more information about this vocabulary or to request additions or changes, please contact us (http://rgd.mcw.edu/contact/index.shtml).

Term:COP
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Accession:RS:0000184 term browser browse the term
Synonyms:related_synonym: Copenhagen;   RGD ID: 60998


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COP term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Hcar13 Hepatocarcinoma resistance QTL 13 IEA RGD PMID:15185337 RGD:737884 NCBI chr 4:1...31,554,484 JBrowse link
Q Hcar14 Hepatocarcinoma resistance QTL 14 IEA RGD PMID:15185337 RGD:737884 NCBI chr18:53,033,494...87,080,053 JBrowse link
Q Hcas5 Hepatocarcinoma susceptibility QTL 5 IEA RGD PMID:15185337 RGD:737884 NCBI chr 1:191,825,895...279,986,079 JBrowse link
Q Hcas6 Hepatocarcinoma susceptibility QTL 6 IEA RGD PMID:15185337 RGD:737884 NCBI chr14:61,873,323...88,870,994 JBrowse link
Q Hcas7 Hepatocarcinoma susceptibility QTL 7 IEA RGD PMID:15185337 RGD:737884 NCBI chr15:2,327,877...53,535,766 JBrowse link
Q Lnnr3 Liver neoplastic nodule remodeling QTL 3 IEA RGD PMID:15185337 RGD:737884 NCBI chr 2:1...41,179,397 JBrowse link
Q Lnnr4 Liver neoplastic nodule remodeling QTL 4 IEA RGD PMID:15185337 RGD:737884 NCBI chr13:1...47,622,148 JBrowse link
Q Lnnr5 Liver neoplastic nodule remodeling QTL 5 IEA RGD PMID:15185337 RGD:737884 NCBI chr13:65,008,245...91,629,354 JBrowse link
Q Lnnr6 Liver neoplastic nodule remodeling QTL 6 IEA RGD PMID:15185337 RGD:737884 NCBI chr13:80,403,559...91,629,354 JBrowse link
Q Mcs1 Mammary carcinoma susceptibility QTL 1 IEA RGD PMID:8168109 RGD:61080 NCBI chr 2:5,417,336...21,657,459 JBrowse link
Q Mcs2 Mammary carcinoma susceptibility QTL 2 IEA RGD PMID:9584103 RGD:61081 NCBI chr 7:24,738,680...40,433,335 JBrowse link
Q Mcs3 Mammary carcinoma susceptibility QTL 3 IEA RGD PMID:9584103 RGD:61081 NCBI chr 1:108,057,233...167,517,487 JBrowse link
Q Mcs4 Mammary carcinoma susceptibility QTL 4 IEA RGD PMID:9584103 RGD:61081 NCBI chr 8:20,717,592...65,717,592 JBrowse link
COP/CrCrl term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Emca1 Estrogen-induced mammary cancer QTL 1 IEA RGD PMID:15611180 RGD:1358124 NCBI chr 5:102,945,579...154,732,228 JBrowse link
Q Emca2 Estrogen-induced mammary cancer QTL 2 IEA RGD PMID:15611180 RGD:1358124 NCBI chr18:19,031,030...68,436,105 JBrowse link
Q Ept1 Estrogen-induced pituitary tumorigenesis QTL 1 IEA RGD PMID:15687265 RGD:1334449 NCBI chr 6:8,083,222...21,515,439 JBrowse link
Q Ept10 Estrogen-induced pituitary tumorigenesis QTL 10 IEA RGD PMID:15687265 RGD:1334449 NCBI chr 1:210,360,774...264,802,828 JBrowse link
Q Ept13 Estrogen-induced pituitary tumorigenesis QTL 13 IEA RGD PMID:15687265 RGD:1334449 NCBI chr 1:24,297,799...78,748,000 JBrowse link
Q Ept2 Estrogen-induced pituitary tumorigenesis QTL 2 IEA RGD PMID:15687265 RGD:1334449 NCBI chr 3:48,562,146...115,249,962 JBrowse link
Q Ept6 Estrogen-induced pituitary tumorigenesis QTL 6 IEA RGD PMID:15687265 RGD:1334449 NCBI chr 3:571,136...6,000,866 JBrowse link
Q Ept9 Estrogen-induced pituitary tumorigenesis QTL 9 IEA RGD PMID:15687265 RGD:1334449 NCBI chr10:75,983,805...99,492,217 JBrowse link
COP/OlaHsd term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Arunc1 Aerobic running capacity QTL 1 IEA RGD PMID:12079278 RGD:619535 NCBI chr16:35,307,110...63,909,364 JBrowse link
Q Arunc2 Aerobic running capacity QTL 2 IEA RGD PMID:12079278 RGD:619535 NCBI chr16:73,219,638...80,115,794 JBrowse link
Q Arunc3 Aerobic running capacity QTL 3 IEA RGD PMID:12079278 RGD:619535 NCBI chr 3:2,631,421...33,477,544 JBrowse link
Q Bmd19 Bone mineral density QTL 19 IEA RGD PMID:18282130 RGD:2293456 NCBI chr 2:43,141,290...114,164,944 JBrowse link
Q Bmd20 Bone mineral density QTL 20 IEA RGD PMID:18282130 RGD:2293456 NCBI chr 6:13,122,958...21,165,729 JBrowse link
Q Bmd21 Bone mineral density QTL 21 IEA RGD PMID:18282130 RGD:2293456 NCBI chr 7:55,495,689...100,495,689 JBrowse link
Q Bmd22 Bone mineral density QTL 22 IEA RGD PMID:18282130 RGD:2293456 NCBI chr10:51,289,203...84,596,393 JBrowse link
Q Bmd23 Bone mineral density QTL 23 IEA RGD PMID:18282130 RGD:2293456 NCBI chr18:53,033,494...68,524,999 JBrowse link
Q Bmd24 Bone mineral density QTL 24 IEA RGD PMID:18282130 RGD:2293456 NCBI chr 2:43,141,290...114,164,944 JBrowse link
Q Bmd25 Bone mineral density QTL 25 IEA RGD PMID:18282130 RGD:2293456 NCBI chr10:51,289,203...84,596,393 JBrowse link
Q Bmd26 Bone mineral density QTL 26 IEA RGD PMID:18282130 RGD:2293456 NCBI chr12:17,960,865...38,409,001 JBrowse link
Q Bmd27 Bone mineral density QTL 27 IEA RGD PMID:18282130 RGD:2293456 NCBI chr 1:244,401,175...264,636,028 JBrowse link
Q Bmd28 Bone mineral density QTL 28 IEA RGD PMID:18282130 RGD:2293456 NCBI chr17:4,716,067...27,691,136 JBrowse link
Q Bmd29 Bone mineral density QTL 29 IEA RGD PMID:18282130 RGD:2293456 NCBI chr 7:55,495,689...100,495,689 JBrowse link
Q Bmd30 Bone mineral density QTL 30 IEA RGD PMID:18282130 RGD:2293456 NCBI chr10:51,289,203...84,596,393 JBrowse link
Q Bmd31 Bone mineral density QTL 31 IEA RGD PMID:18282130 RGD:2293456 NCBI chr17:4,716,067...27,691,136 JBrowse link
Q Bmd32 Bone mineral density QTL 32 IEA RGD PMID:18282130 RGD:2293456 NCBI chr 7:55,495,689...100,495,689 JBrowse link
Q Bmd33 Bone mineral density QTL 33 IEA RGD PMID:18282130 RGD:2293456 NCBI chr10:51,289,203...84,596,393 JBrowse link
Q Bmd34 Bone mineral density QTL 34 IEA RGD PMID:18282130 RGD:2293456 NCBI chr 1:244,401,175...264,636,028 JBrowse link
Q Bmd35 Bone mineral density QTL 35 IEA RGD PMID:18282130 RGD:2293456 NCBI chr 4:136,908,430...182,878,540 JBrowse link
Q Bmd36 Bone mineral density QTL 36 IEA RGD PMID:18282130 RGD:2293456 NCBI chr15:39,749,557...79,033,707 JBrowse link
Q Bmd37 Bone mineral density QTL 37 IEA RGD PMID:18282130 RGD:2293456 NCBI chr15:39,749,557...79,033,707 JBrowse link
Q Bmd38 Bone mineral density QTL 38 IEA RGD PMID:18282130 RGD:2293456 NCBI chr 5:8,632,285...53,632,285 JBrowse link
Q Bmd39 Bone mineral density QTL 39 IEA RGD PMID:18282130 RGD:2293456 NCBI chr 8:58,230,766...106,394,378 JBrowse link
Q Bmd40 Bone mineral density QTL 40 IEA RGD PMID:18707222 RGD:2300109 NCBI chr 1:221,901,238...266,901,238 JBrowse link
Q Bmd41 Bone mineral density QTL 41 IEA RGD PMID:18707222 RGD:2300109 NCBI chr 1:189,170,900...234,170,900 JBrowse link
Q Bmd42 Bone mineral density QTL 42 IEA RGD PMID:18707222 RGD:2300109 NCBI chr 1:189,170,900...234,170,900 JBrowse link
Q Bmd43 Bone mineral density QTL 43 IEA RGD PMID:18707222 RGD:2300109 NCBI chr 1:189,170,900...234,170,900 JBrowse link
Q Bmd44 Bone mineral density QTL 44 IEA RGD PMID:18707222 RGD:2300109 NCBI chr 1:58,209,327...103,209,327 JBrowse link
Q Bmd45 Bone mineral density QTL 45 IEA RGD PMID:18707222 RGD:2300109 NCBI chr 2:91,664,872...136,664,872 JBrowse link
Q Bmd46 Bone mineral density QTL 46 IEA RGD PMID:18707222 RGD:2300109 NCBI chr 2:91,664,872...136,664,872 JBrowse link
Q Bmd47 Bone mineral density QTL 47 IEA RGD PMID:18707222 RGD:2300109 NCBI chr 2:20,641,371...65,641,371 JBrowse link
Q Bmd48 Bone mineral density QTL 48 IEA RGD PMID:18707222 RGD:2300109 NCBI chr 2:194,378,622...239,378,622 JBrowse link
Q Bmd49 Bone mineral density QTL 49 IEA RGD PMID:18707222 RGD:2300109 NCBI chr 2:91,664,872...136,664,872 JBrowse link
Q Bmd50 Bone mineral density QTL 50 IEA RGD PMID:18707222 RGD:2300109 NCBI chr 4:61,975,371...106,975,371 JBrowse link
Q Bmd51 Bone mineral density QTL 51 IEA RGD PMID:18707222 RGD:2300109 NCBI chr 6:1...35,623,029 JBrowse link
Q Bmd52 Bone mineral density QTL 52 IEA RGD PMID:18707222 RGD:2300109 NCBI chr 6:1...35,623,029 JBrowse link
Q Bmd53 Bone mineral density QTL 53 IEA RGD PMID:18707222 RGD:2300109
Q Bmd54 Bone mineral density QTL 54 IEA RGD PMID:18707222 RGD:2300109 NCBI chr 7:55,495,689...100,495,689 JBrowse link
Q Bmd55 Bone mineral density QTL 55 IEA RGD PMID:18707222 RGD:2300109 NCBI chr 8:83,894,304...128,894,304 JBrowse link
Q Bmd56 Bone mineral density QTL 56 IEA RGD PMID:18707222 RGD:2300109 NCBI chr 8:104,682,575...133,307,652 JBrowse link
Q Bmd57 Bone mineral density QTL 57 IEA RGD PMID:18707222 RGD:2300109 NCBI chr10:73,008,136...112,626,471 JBrowse link
Q Bmd58 Bone mineral density QTL 58 IEA RGD PMID:18707222 RGD:2300109 NCBI chr10:28,789,280...73,789,280 JBrowse link
Q Bmd59 Bone mineral density QTL 59 IEA RGD PMID:18707222 RGD:2300109 NCBI chr12:15,908,900...52,716,770 JBrowse link
Q Bmd60 Bone mineral density QTL 60 IEA RGD PMID:18707222 RGD:2300109 NCBI chr14:1...27,597,761 JBrowse link
Q Bmd61 Bone mineral density QTL 61 IEA RGD PMID:18707222 RGD:2300109 NCBI chr14:1...27,597,761 JBrowse link
Q Bmd62 Bone mineral density QTL 62 IEA RGD PMID:18707222 RGD:2300109 NCBI chr15:17,249,641...62,249,641 JBrowse link
Q Bmd63 Bone mineral density QTL 63 IEA RGD PMID:18707222 RGD:2300109 NCBI chr15:17,249,641...62,249,641 JBrowse link
Q Bmd64 Bone mineral density QTL 64 IEA RGD PMID:18707222 RGD:2300109 NCBI chr16:41,512,710...86,512,710 JBrowse link
Q Bmd65 Bone mineral density QTL 65 IEA RGD PMID:18707222 RGD:2300109 NCBI chr18:30,533,614...75,533,614 JBrowse link
Q Bmd66 Bone mineral density QTL 66 IEA RGD PMID:18707222 RGD:2300109 NCBI chr18:30,533,614...75,533,614 JBrowse link
Q Bmd67 Bone mineral density QTL 67 IEA RGD PMID:18707222 RGD:2300109 NCBI chr18:1...38,195,967 JBrowse link
Q Bmd68 Bone mineral density QTL 68 IEA RGD PMID:18707222 RGD:2300109 NCBI chr20:26,608,843...56,205,956 JBrowse link
Q Bmd88 Bone mineral density QTL 88 IEA RGD PMID:18282130 RGD:2293456 NCBI chr 9:27,486,036...63,264,281 JBrowse link
Q Bmd89 Bone mineral density QTL 89 IEA RGD PMID:18282130 RGD:2293456 NCBI chr 2:91,664,872...136,664,872 JBrowse link
Q Bmd90 Bone mineral density QTL 90 IEA RGD PMID:18282130 RGD:2293456 NCBI chr10:51,289,203...84,596,393 JBrowse link
Q Bmd91 Bone mineral density QTL 91 IEA RGD PMID:18282130 RGD:2293456 NCBI chr 9:27,486,155...88,333,183 JBrowse link
Q Bss22 Bone structure and strength QTL 22 IEA RGD PMID:18158281 RGD:2293455 NCBI chr 1:189,170,900...234,170,900 JBrowse link
Q Bss23 Bone structure and strength QTL 23 IEA RGD PMID:18158281 RGD:2293455 NCBI chr 6:1...43,665,660 JBrowse link
Q Bss24 Bone structure and strength QTL 24 IEA RGD PMID:18158281 RGD:2293455 NCBI chr 7:55,495,689...100,495,689 JBrowse link
Q Bss25 Bone structure and strength QTL 25 IEA RGD PMID:18158281 RGD:2293455 NCBI chr10:73,008,136...112,626,471 JBrowse link
Q Bss26 Bone structure and strength QTL 26 IEA RGD PMID:18158281 RGD:2293455 NCBI chr13:71,230,858...114,033,958 JBrowse link
Q Bss27 Bone structure and strength QTL 27 IEA RGD PMID:18158281 RGD:2293455 NCBI chr 1:189,170,900...234,170,900 JBrowse link
Q Bss28 Bone structure and strength QTL 28 IEA RGD PMID:18158281 RGD:2293455 NCBI chr 6:1...43,665,660 JBrowse link
Q Bss29 Bone structure and strength QTL 29 IEA RGD PMID:18158281 RGD:2293455 NCBI chr15:17,249,641...62,249,641 JBrowse link
Q Bss30 Bone structure and strength QTL 30 IEA RGD PMID:18158281 RGD:2293455 NCBI chr 1:189,170,900...234,170,900 JBrowse link
Q Bss31 Bone structure and strength QTL 31 IEA RGD PMID:18158281 RGD:2293455 NCBI chr 6:1...43,665,660 JBrowse link
Q Bss32 Bone structure and strength QTL 32 IEA RGD PMID:18158281 RGD:2293455 NCBI chr 7:55,495,689...100,495,689 JBrowse link
Q Bss33 Bone structure and strength QTL 33 IEA RGD PMID:18158281 RGD:2293455 NCBI chr10:73,008,136...112,626,471 JBrowse link
Q Bss34 Bone structure and strength QTL 34 IEA RGD PMID:18158281 RGD:2293455 NCBI chr13:71,230,858...114,033,958 JBrowse link
Q Bss35 Bone structure and strength QTL 35 IEA RGD PMID:18158281 RGD:2293455 NCBI chr18:30,533,614...75,533,614 JBrowse link
Q Bss36 Bone structure and strength QTL 36 IEA RGD PMID:18158281 RGD:2293455 NCBI chr 1:221,901,238...266,901,238 JBrowse link
Q Bss37 Bone structure and strength QTL 37 IEA RGD PMID:18158281 RGD:2293455 NCBI chr 5:125,455,818...157,225,114 JBrowse link
Q Bss38 Bone structure and strength QTL 38 IEA RGD PMID:18158281 RGD:2293455 NCBI chr 1:221,901,238...266,901,238 JBrowse link
Q Bss39 Bone structure and strength QTL 39 IEA RGD PMID:18158281 RGD:2293455 NCBI chr 1:221,901,238...266,901,238 JBrowse link
Q Bss40 Bone structure and strength QTL 40 IEA RGD PMID:18158281 RGD:2293455 NCBI chr10:1...35,538,813 JBrowse link
Q Bss41 Bone structure and strength QTL 41 IEA RGD PMID:18158281 RGD:2293455 NCBI chr 1:189,170,900...234,170,900 JBrowse link
Q Bss42 Bone structure and strength QTL 42 IEA RGD PMID:18158281 RGD:2293455 NCBI chr 7:55,495,689...100,495,689 JBrowse link
Q Bss43 Bone structure and strength QTL 43 IEA RGD PMID:18158281 RGD:2293455 NCBI chr10:62,096,293...107,096,293 JBrowse link
Q Bss44 Bone structure and strength QTL 44 IEA RGD PMID:18158281 RGD:2293455 NCBI chr 2:43,141,290...154,583,160 JBrowse link
Q Bss45 Bone structure and strength QTL 45 IEA RGD PMID:18158281 RGD:2293455 NCBI chr16:41,512,710...86,512,710 JBrowse link
Q Bss46 Bone structure and strength QTL 46 IEA RGD PMID:18158281 RGD:2293455 NCBI chr18:15,695,872...68,524,999 JBrowse link
Q Bss47 Bone structure and strength QTL 47 IEA RGD PMID:18158281 RGD:2293455 NCBI chr 1:189,170,900...234,170,900 JBrowse link
Q Bss48 Bone structure and strength QTL 48 IEA RGD PMID:18158281 RGD:2293455
Q Bss49 Bone structure and strength QTL 49 IEA RGD PMID:18158281 RGD:2293455 NCBI chr12:15,908,900...52,716,770 JBrowse link
Q Bss50 Bone structure and strength QTL 50 IEA RGD PMID:18158281 RGD:2293455 NCBI chr18:1...38,195,967 JBrowse link
Q Mcs30 Mammary carcinoma susceptibility QTL 30 IEA RGD PMID:24023717 RGD:7327193 NCBI chr12:1,258,139...10,257,059 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  rat strain 6172
    inbred strain 2689
      COP 111
        COP/CrCrl 9
        COP/OlaHsd 88
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.