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ONTOLOGY REPORT - ANNOTATIONS


Term:intron_variant
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Accession:SO:0001627 term browser browse the term
Definition:A transcript variant occurring within an intron.
Comment:EBI term: Intronic variations - In intron.
Synonyms:exact_synonym: Jannovar:intron_variant;   Seattleseq:intron;   VAAST:intron_variant;   VEP:intron_variant;   intron variant;   intron_;   intronic;   snpEff:INTRON
 related_synonym: ANNOVAR:intronic;   Seattleseq:intron-near-splice
 xref: http://snp.gs.washington.edu/SeattleSeqAnnotation137/HelpHowToUse.jsp "Seattleseq";   http://snpeff.sourceforge.net/SnpEff_manual.html;   http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences


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  SO ontology 0
    sequence_variant 0
      structural_variant 0
        feature_variant 0
          gene_variant 0
            transcript_variant 0
              intron_variant 0
                coding_transcript_intron_variant + 0
                conserved_intron_variant 0
                non_coding_transcript_intron_variant 0
                splice_site_variant + 0
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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.