Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   

VERTEBRATE TRAIT ONTOLOGY - ANNOTATIONS

The Vertebrate Trait Ontology (VT) is being developed as a collaborative effort between the Rat Genome Database at the Medical College of Wisconsin (RGD, http://rgd.mcw.edu), Mouse Genome Informatics at the Jackson Laboratory (http://www.informatics.jax.org/) and the Animal QTL database at Iowa State University (http://www.animalgenome.org/cgi-bin/QTLdb/index). For more information about this vocabulary, or to request additions or changes, please contact us (http://rgd.mcw.edu/contact/index.shtml).

Term:blood sterol amount
go back to main search page
Accession:VT:0010582 term browser browse the term
Definition:The proportion, quantity, or volume in whole blood, serum, or plasma of a steroid with one OH group.


show annotations for term's descendants           Sort by:
 
blood cholesterol amount term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Scl1 Serum cholesterol level QTL 1 IDA RGD PMID:10634822 RGD:61092 NCBI chr15:18,513,913...88,036,354 JBrowse link
Q Scl11 Serum cholesterol level QTL 11 IDA RGD PMID:11414700 RGD:619656 NCBI chr14:19,159,919...38,289,187 JBrowse link
Q Scl14 Serum cholesterol level QTL 14 IDA RGD PMID:14739155 RGD:737694 NCBI chr 5:114,140,832...159,140,832 JBrowse link
Q Scl15 Serum cholesterol level QTL 15 IDA RGD PMID:14739155 RGD:737694 NCBI chr 5:34,402,409...79,402,409 JBrowse link
Q Scl16 Serum cholesterol level QTL 16 IDA RGD PMID:14739155 RGD:737694 NCBI chr 8:35,041,414...80,041,414 JBrowse link
Q Scl17 Serum cholesterol level QTL 17 IDA RGD PMID:14739155 RGD:737694 NCBI chr 2:228,712,271...266,435,125 JBrowse link
Q Scl19 Serum cholesterol QTL 19 IDA RGD PMID:14709677 RGD:1299960 NCBI chr 1:94,225,372...130,917,265 JBrowse link
Q Scl2 Serum cholesterol level QTL 2 IDA RGD PMID:10634822 RGD:61092 NCBI chr 5:61,086,525...149,030,144 JBrowse link
Q Scl20 Serum cholesterol level QTL 20 IDA RGD PMID:14709677 RGD:1299960 NCBI chr 5:84,963,058...173,504,662 JBrowse link
Q Scl21 Serum cholesterol level QTL 21 IDA RGD PMID:14709677 RGD:1299960 NCBI chr12:8,954,593...27,911,196 JBrowse link
Q Scl22 Serum cholesterol level QTL 22 IDA RGD PMID:9199194 RGD:61055 NCBI chr18:15,532,963...32,704,022 JBrowse link
Q Scl25 Serum cholesterol level QTL 25 IDA RGD PMID:11721057 RGD:70849 NCBI chr 1:99,983,293...127,203,999 JBrowse link
Q Scl26 Serum cholesterol level QTL 26 IDA RGD PMID:11721057 RGD:70849 NCBI chr 5:44,404,276...89,432,042 JBrowse link
Q Scl29 Serum cholesterol level QTL 29 IDA RGD PMID:14724732 RGD:737686 NCBI chr 6:37,608,980...75,023,446 JBrowse link
Q Scl3 Serum cholesterol level QTL 3 IDA RGD PMID:10634822 RGD:61092 NCBI chr 7:53,200,344...98,200,344 JBrowse link
Q Scl30 Serum cholesterol level QTL 30 IDA RGD PMID:15452030 RGD:1302893 NCBI chr 7:25,365,633...57,064,364 JBrowse link
Q Scl31 Serum cholesterol level QTL 31 IDA RGD PMID:15452030 RGD:1302893 NCBI chr17:58,397,260...63,676,140 JBrowse link
Q Scl33 Serum cholesterol QTL 33 IDA RGD PMID:14709677 RGD:1299960
Q Scl34 Serum cholesterol QTL 34 IDA RGD PMID:14709677 RGD:1299960 NCBI chr 1:197,187,728...238,220,385 JBrowse link
Q Scl35 Serum cholesterol QTL 35 IDA RGD PMID:14709677 RGD:1299960 NCBI chr 5:29,641,661...74,641,661 JBrowse link
Q Scl36 Serum cholesterol QTL 36 IDA RGD PMID:14709677 RGD:1299960 NCBI chr 1:50,522,714...94,225,616 JBrowse link
Q Scl4 Serum cholesterol level QTL 4 IDA RGD PMID:9633608 RGD:619667 NCBI chr 4:94,414,208...139,414,208 JBrowse link
Q Scl44 Serum cholesterol level QTL 44 IDA RGD PMID:16061941 RGD:1547851 NCBI chr 5:40,777,918...154,732,375 JBrowse link
Q Scl45 Serum cholesterol level QTL 45 IDA RGD PMID:16061941 RGD:1547851 NCBI chr14:51,818,462...105,074,364 JBrowse link
Q Scl46 Serum cholesterol level QTL 46 IDA RGD PMID:16061941 RGD:1547851 NCBI chr 4:131,864,442...176,864,442 JBrowse link
Q Scl47 Serum cholesterol level QTL 47 IDA RGD PMID:16061941 RGD:1547851 NCBI chr10:53,104,718...98,104,718 JBrowse link
Q Scl48 Serum cholesterol level QTL 48 IDA RGD PMID:16061941 RGD:1547851 NCBI chr12:15,021,986...52,716,770 JBrowse link
Q Scl5 Serum cholesterol level QTL 5 IDA RGD PMID:9633608 RGD:619667 NCBI chr 1:258,132,568...282,763,074 JBrowse link
Q Scl54 Serum cholesterol level QTL 54 IDA RGD PMID:17620956 RGD:2290428 NCBI chr 5:31,926,122...136,640,934 JBrowse link
Q Scl55 Serum cholesterol level QTL 55 IDA RGD PMID:17620956 RGD:2290428 NCBI chr 2:26,186,097...142,053,534 JBrowse link
Q Scl56 Serum cholesterol level QTL 56 IDA RGD PMID:17620956 RGD:2290428 NCBI chr 3:1...95,176,874 JBrowse link
Q Scl57 Serum cholesterol level QTL 57 IDA RGD PMID:17620956 RGD:2290428 NCBI chr 9:41,261,034...102,531,865 JBrowse link
Q Scl58 Serum cholesterol level QTL 58 IDA RGD PMID:17620956 RGD:2290428 NCBI chr11:11,367,306...44,444,347 JBrowse link
Q Scl59 Serum cholesterol level QTL 59 IDA RGD PMID:18753676 RGD:2300117 NCBI chr14:78,446,303...110,402,569 JBrowse link
Q Scl6 Serum cholesterol level QTL 6 IDA RGD PMID:12482837 RGD:629577 NCBI chr 1:67,227,683...94,201,552 JBrowse link
Q Scl60 Serum cholesterol level QTL 60 IDA RGD PMID:10720472 RGD:619689 NCBI chr 5:149,568,588...167,739,697 JBrowse link
Q Scl62 Serum cholesterol level QTL 62 IDA RGD PMID:19584880 RGD:2312642 NCBI chr 3:1...39,773,425 JBrowse link
Q Scl63 Serum cholesterol level QTL 63 IDA RGD PMID:19584880 RGD:2312642 NCBI chr 3:103,141,814...176,418,101 JBrowse link
Q Scl64 Serum cholesterol level QTL 64 IDA RGD PMID:19584880 RGD:2312642 NCBI chr 5:71,154,828...108,092,802 JBrowse link
Q Scl65 Serum cholesterol level QTL 65 IDA RGD PMID:19584880 RGD:2312642 NCBI chr10:60,875,260...105,875,260 JBrowse link
Q Scl66 Serum cholesterol level QTL 66 IDA RGD PMID:19584172 RGD:2316856 NCBI chr 8:33,558,764...113,580,387 JBrowse link
Q Scl67 Serum cholesterol level QTL 67 IDA RGD PMID:11071303 RGD:619669
Q Scl7 Serum cholesterol level QTL 7 IDA RGD PMID:12482837 RGD:629577 NCBI chr 7:45,301,573...90,301,573 JBrowse link
Q Scl8 Serum cholesterol level QTL8 IDA RGD PMID:12482837 RGD:629577 NCBI chr 2:231,621,666...266,435,125 JBrowse link
Q Scl9 Serum cholesterol level QTL 9 IDA RGD PMID:12482837 RGD:629577 NCBI chr16:17,309,396...22,744,540 JBrowse link
blood HDL cholesterol amount term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Scl12 Serum cholesterol level QTL 12 IDA RGD PMID:8698878 RGD:61079 NCBI chr19:15,294,524...33,991,703 JBrowse link
Q Scl27 Serum cholesterol level QTL 27 IDA RGD PMID:11721057 RGD:70849 NCBI chr18:53,861,252...61,985,812 JBrowse link
Q Scl28 Serum cholesterol level QTL 28 IDA RGD PMID:11721057 RGD:70849 NCBI chr18:15,539,427...25,961,165 JBrowse link
Q Scl32 Serum cholesterol level QTL 32 IDA RGD PMID:15452030 RGD:1302893 NCBI chr17:18,676,140...63,676,140 JBrowse link
Q Scl61 Serum cholesterol level QTL 61 IDA RGD PMID:10720472 RGD:619689 NCBI chr17:28,073,589...56,207,236 JBrowse link
Q Scl79 Serum cholesterol level QTL 79 IDA RGD PMID:25296178 RGD:10402111 NCBI chr 7:98,200,188...111,043,530 JBrowse link
blood LDL cholesterol amount term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Scl18 Serum cholesterol level QTL 18 IDA RGD PMID:14739155 RGD:737694 NCBI chr 5:83,424,556...128,424,556 JBrowse link
Q Scl69 Serum cholesterol level QTL 69 IDA RGD PMID:25296178 RGD:10402111 NCBI chr 3:21,223,803...66,223,803 JBrowse link
Q Scl70 Serum cholesterol level QTL 70 IDA RGD PMID:25296178 RGD:10402111 NCBI chr 3:21,223,803...66,223,803 JBrowse link
Q Scl71 Serum cholesterol level QTL 71 IDA RGD PMID:25296178 RGD:10402111 NCBI chr 3:24,772,984...28,136,884 JBrowse link
Q Scl72 Serum cholesterol level QTL 72 IDA RGD PMID:25296178 RGD:10402111 NCBI chr 3:24,772,984...28,136,884 JBrowse link
Q Scl73 Serum cholesterol level QTL 73 IDA RGD PMID:25296178 RGD:10402111 NCBI chr 3:24,772,984...28,136,884 JBrowse link
Q Scl74 Serum cholesterol level QTL 74 IDA RGD PMID:25296178 RGD:10402111 NCBI chr 3:39,248,391...52,182,792 JBrowse link
Q Scl75 Serum cholesterol level QTL 75 IDA RGD PMID:25296178 RGD:10402111 NCBI chr 3:39,248,391...52,182,792 JBrowse link
Q Scl80 Serum cholesterol level QTL 80 IDA RGD PMID:25296178 RGD:10402111 NCBI chr11:80,358,408...87,200,449 JBrowse link
blood VLDL cholesterol amount term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Scl68 Serum cholesterol level QTL 68 IDA RGD PMID:15452030 RGD:1302893 NCBI chr17:18,676,140...63,676,140 JBrowse link
Q Scl76 Serum cholesterol level QTL 76 IDA RGD PMID:25296178 RGD:10402111 NCBI chr 4:47,685,694...55,791,834 JBrowse link
Q Scl77 Serum cholesterol level QTL 77 IDA RGD PMID:25296178 RGD:10402111 NCBI chr 4:47,685,694...55,791,834 JBrowse link
Q Scl78 Serum cholesterol level QTL 78 IDA RGD PMID:25296178 RGD:10402111 NCBI chr 4:47,685,694...55,791,834 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  vertebrate trait 2379
    organism trait 932
      homeostasis trait 543
        blood homeostasis trait 427
          blood lipid amount 109
            blood sterol amount 64
              blood bile acid amount 0
              blood cholesterol amount + 64
              blood phytosterol amount + 0
Path 2
Term Annotations click to browse term
  vertebrate trait 2379
    organism trait 932
      homeostasis trait 543
        molecule homeostasis trait 262
          lipid homeostasis trait 112
            lipid amount 112
              blood lipid amount 109
                blood sterol amount 64
                  blood bile acid amount 0
                  blood cholesterol amount + 64
                  blood phytosterol amount + 0
paths to the root

NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.